BLASTX nr result

ID: Papaver29_contig00045771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00045771
         (542 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010270055.1| PREDICTED: zinc finger CCCH domain-containin...    60   6e-07
ref|XP_010270054.1| PREDICTED: zinc finger CCCH domain-containin...    60   6e-07
ref|XP_010270053.1| PREDICTED: zinc finger CCCH domain-containin...    60   6e-07
ref|XP_010252578.1| PREDICTED: zinc finger CCCH domain-containin...    56   9e-06

>ref|XP_010270055.1| PREDICTED: zinc finger CCCH domain-containing protein 57 isoform X3
           [Nelumbo nucifera]
          Length = 345

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 41/95 (43%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
 Frame = +1

Query: 1   KYDHPLTGLYNYNLGMPALSIPDPT-FSYNRISTLAGXXXXXXXXXXXXXXDQNEETDTT 177
           KYDHPL   ++Y++ +PALS+PDPT F Y R S +A               D+  E  TT
Sbjct: 253 KYDHPLGAYFSYSMSLPALSMPDPTLFPYQRNSPMA-RSAETSPSKSSRLPDRKPEVSTT 311

Query: 178 SIKHQCMDAKTSEEPKQQAVSSVNTSTTSLQLPLD 282
             KHQ  D K  E P QQA +   TS TS +LP D
Sbjct: 312 --KHQNPDTKPPESPPQQA-TPTQTSPTS-ELPHD 342


>ref|XP_010270054.1| PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X2
           [Nelumbo nucifera]
          Length = 385

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 41/95 (43%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
 Frame = +1

Query: 1   KYDHPLTGLYNYNLGMPALSIPDPT-FSYNRISTLAGXXXXXXXXXXXXXXDQNEETDTT 177
           KYDHPL   ++Y++ +PALS+PDPT F Y R S +A               D+  E  TT
Sbjct: 293 KYDHPLGAYFSYSMSLPALSMPDPTLFPYQRNSPMA-RSAETSPSKSSRLPDRKPEVSTT 351

Query: 178 SIKHQCMDAKTSEEPKQQAVSSVNTSTTSLQLPLD 282
             KHQ  D K  E P QQA +   TS TS +LP D
Sbjct: 352 --KHQNPDTKPPESPPQQA-TPTQTSPTS-ELPHD 382


>ref|XP_010270053.1| PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X1
           [Nelumbo nucifera]
          Length = 450

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 41/95 (43%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
 Frame = +1

Query: 1   KYDHPLTGLYNYNLGMPALSIPDPT-FSYNRISTLAGXXXXXXXXXXXXXXDQNEETDTT 177
           KYDHPL   ++Y++ +PALS+PDPT F Y R S +A               D+  E  TT
Sbjct: 358 KYDHPLGAYFSYSMSLPALSMPDPTLFPYQRNSPMA-RSAETSPSKSSRLPDRKPEVSTT 416

Query: 178 SIKHQCMDAKTSEEPKQQAVSSVNTSTTSLQLPLD 282
             KHQ  D K  E P QQA +   TS TS +LP D
Sbjct: 417 --KHQNPDTKPPESPPQQA-TPTQTSPTS-ELPHD 447


>ref|XP_010252578.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Nelumbo
           nucifera] gi|719989253|ref|XP_010252579.1| PREDICTED:
           zinc finger CCCH domain-containing protein 3 [Nelumbo
           nucifera]
          Length = 452

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 39/97 (40%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
 Frame = +1

Query: 1   KYDHPLTGLYNYNLGMPALSI--PDPT-FSYNRISTLAGXXXXXXXXXXXXXXDQNEETD 171
           KYDHPL G YNY +G+P LSI   DPT F Y R S +                  + + +
Sbjct: 359 KYDHPLAGYYNYGMGLPTLSIAAADPTSFPYQRSSPMTRSSETSPSKSSRL---PDRKPE 415

Query: 172 TTSIKHQCMDAKTSEEPKQQAVSSVNTSTTSLQLPLD 282
            TS KHQ  D K  E    QA S   TS TS + P D
Sbjct: 416 VTSTKHQNSDTKPLE---PQATSPTQTSPTSSERPHD 449