BLASTX nr result

ID: Papaver29_contig00045738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00045738
         (590 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010660329.1| PREDICTED: double-stranded RNA-binding prote...    67   5e-09
ref|XP_010660325.1| PREDICTED: double-stranded RNA-binding prote...    67   5e-09
ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...    67   5e-09
ref|XP_013454552.1| double-stranded RNA-binding motif protein [M...    58   3e-06

>ref|XP_010660329.1| PREDICTED: double-stranded RNA-binding protein 4 isoform X2 [Vitis
           vinifera]
          Length = 357

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 50/131 (38%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
 Frame = -1

Query: 590 RSKKEAERLAARVAIRSILGTSDSGIYLSKIIKSKSTLFEAPLLVAEPQIIHDTCM---A 420
           R+KKEAE+LAAR  I SILG S SG  LS+IIKSK  L+ A   V +P  IH   +    
Sbjct: 155 RNKKEAEQLAARTVILSILGNSGSGTLLSEIIKSKVKLYAALHRVKDPSYIHTGILPIGL 214

Query: 419 TVAIPGSNCRGILMKRKASQTLAEDVTAPL-----------PPSHEIGNIAILLNQPKPS 273
           T  IP    + + +     Q L   V+ PL           PP HE       L +PKP+
Sbjct: 215 TSGIPPCKGKEVEVAPGTDQLLPTAVSVPLSGQLVHVPVTHPPVHE-------LEKPKPN 267

Query: 272 AASHISEDPYS 240
            +S +   P S
Sbjct: 268 VSSEVIAPPIS 278


>ref|XP_010660325.1| PREDICTED: double-stranded RNA-binding protein 4 isoform X1 [Vitis
           vinifera] gi|731417502|ref|XP_010660326.1| PREDICTED:
           double-stranded RNA-binding protein 4 isoform X1 [Vitis
           vinifera] gi|731417504|ref|XP_010660327.1| PREDICTED:
           double-stranded RNA-binding protein 4 isoform X1 [Vitis
           vinifera] gi|731417506|ref|XP_010660328.1| PREDICTED:
           double-stranded RNA-binding protein 4 isoform X1 [Vitis
           vinifera]
          Length = 357

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 50/131 (38%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
 Frame = -1

Query: 590 RSKKEAERLAARVAIRSILGTSDSGIYLSKIIKSKSTLFEAPLLVAEPQIIHDTCM---A 420
           R+KKEAE+LAAR  I SILG S SG  LS+IIKSK  L+ A   V +P  IH   +    
Sbjct: 155 RNKKEAEQLAARTVILSILGNSGSGTLLSEIIKSKVKLYAALHRVKDPSYIHTGILPIGL 214

Query: 419 TVAIPGSNCRGILMKRKASQTLAEDVTAPL-----------PPSHEIGNIAILLNQPKPS 273
           T  IP    + + +     Q L   V+ PL           PP HE       L +PKP+
Sbjct: 215 TSGIPPCKGKEVEVAPGTDQLLPTAVSVPLSGQLVHVPVTHPPVHE-------LEKPKPN 267

Query: 272 AASHISEDPYS 240
            +S +   P S
Sbjct: 268 VSSEVIAPPIS 278


>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4 isoform X3 [Vitis
           vinifera] gi|731417510|ref|XP_010660330.1| PREDICTED:
           double-stranded RNA-binding protein 4 isoform X3 [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 50/131 (38%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
 Frame = -1

Query: 590 RSKKEAERLAARVAIRSILGTSDSGIYLSKIIKSKSTLFEAPLLVAEPQIIHDTCM---A 420
           R+KKEAE+LAAR  I SILG S SG  LS+IIKSK  L+ A   V +P  IH   +    
Sbjct: 155 RNKKEAEQLAARTVILSILGNSGSGTLLSEIIKSKVKLYAALHRVKDPSYIHTGILPIGL 214

Query: 419 TVAIPGSNCRGILMKRKASQTLAEDVTAPL-----------PPSHEIGNIAILLNQPKPS 273
           T  IP    + + +     Q L   V+ PL           PP HE       L +PKP+
Sbjct: 215 TSGIPPCKGKEVEVAPGTDQLLPTAVSVPLSGQLVHVPVTHPPVHE-------LEKPKPN 267

Query: 272 AASHISEDPYS 240
            +S +   P S
Sbjct: 268 VSSEVIAPPIS 278


>ref|XP_013454552.1| double-stranded RNA-binding motif protein [Medicago truncatula]
           gi|657386219|gb|KEH28583.1| double-stranded RNA-binding
           motif protein [Medicago truncatula]
          Length = 320

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
 Frame = -1

Query: 590 RSKKEAERLAARVAIRSILGTSDSGIYLSKIIKSKSTLFEAPLLVAEPQIIHDTCMATVA 411
           R K +AE LAAR AI SILG S+SG+ L++IIK+K+ L ++     +P+ +  TC + + 
Sbjct: 160 RRKNDAEELAARAAILSILGNSNSGVLLAQIIKTKAELLDS----IKPKALQSTCDSVLV 215

Query: 410 IP-GSNCRGILMKRKASQTLAEDVTAPLPPSHEIGNIA----ILLNQPKPSAASHISE 252
           +P  S+ R  L+ + +     +++    P S  I +I+    +  ++P P AA   +E
Sbjct: 216 LPEESSERSSLLLQLSGAKDKDEIEMACPESGPIISISQQPEMQTHEPTPEAAKSSNE 273


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