BLASTX nr result

ID: Papaver29_contig00045547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00045547
         (1735 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010089954.1| CHD3-type chromatin-remodeling factor PICKLE...    75   2e-11

>ref|XP_010089954.1| CHD3-type chromatin-remodeling factor PICKLE [Morus notabilis]
            gi|587848377|gb|EXB38650.1| CHD3-type
            chromatin-remodeling factor PICKLE [Morus notabilis]
          Length = 2503

 Score = 74.7 bits (182), Expect(2) = 2e-11
 Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 17/286 (5%)
 Frame = -3

Query: 1619 GGLYRHLDTLVSDI*VVNSHEHTVESYVPTSFLQMWFRERFLACRLGTQDLASHMRGIAA 1440
            G  Y+HLD +V D  V+ +  + ++S +  +FLQ++  ER    R      AS       
Sbjct: 324  GTFYKHLDMIVEDE-VLAAGRYVIDSELAINFLQVFLWERI---RKYAGQPASSKSVAFE 379

Query: 1439 VTLSGRLPLTPSRYPRTALYENVHIKKASQKLHLIMDKLKSFVARPYEDVS---GEPLFL 1269
            + ++  LPL  SR+         H+K+    +   +D + +F+ RPY  ++      LF 
Sbjct: 380  LGMNSELPLW-SRW--------FHMKQTQPSICFFLDDIDNFIFRPYVGLATAFASSLFH 430

Query: 1268 NPTTVFLD----DELDSINPQLGDEEWDFVSMVTPGFIPGYFNEKFCAVAYNFNRVARQL 1101
            N ++   D       DS N    D E  +V  + PG +P +       V Y  +RV RQ 
Sbjct: 431  NVSSSASDIVEVPIFDSDNGTWSDLE--YVVSIRPGLLPAWVGNDVFGVNYWPHRVLRQF 488

Query: 1100 GYDQGVPSILTPLFLEDESILHD*YRRFVFKPE--EPR-LCQDL-------PFRLPVSSS 951
            G DQGVP   +  F E +  LHD        P    PR +C  L         ++ ++ S
Sbjct: 489  GIDQGVPRSYS--FTEGD--LHD-------SPSFGLPRFICSSLKSLPSLKSLKIQMAGS 537

Query: 950  RRPPIFTQDWCTYWYDQLTQIAEFVCSPALPMLVLSPRSLHGRCRI 813
             R  ++T  +  YW   +    +F+ SP L    L P S+  R ++
Sbjct: 538  EREGLYTPKFVAYWKKMINDFTQFIKSPPLICRALPPNSVPKRLKL 583



 Score = 23.5 bits (49), Expect(2) = 2e-11
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 1729 WLIHDLFECPPKDIIRDVILHIAVLMSRGVTYPLDPM 1619
            WL   +F     D+I+  +  +A+ +++ V +PL P+
Sbjct: 285  WLSKFVFPELSGDVIQRRLFRLAIKIAQAVRFPLAPI 321


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