BLASTX nr result

ID: Papaver29_contig00043852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00043852
         (550 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010272871.1| PREDICTED: pre-rRNA-processing protein TSR2-...    48   2e-06

>ref|XP_010272871.1| PREDICTED: pre-rRNA-processing protein TSR2-like [Nelumbo nucifera]
           gi|720053884|ref|XP_010272872.1| PREDICTED:
           pre-rRNA-processing protein TSR2-like [Nelumbo nucifera]
          Length = 204

 Score = 48.1 bits (113), Expect(2) = 2e-06
 Identities = 20/31 (64%), Positives = 27/31 (87%)
 Frame = -3

Query: 542 LMIMHEECLQGKYEEIQKLRTSSNGSKAVSK 450
           LMIMHE+CLQG YE I+KLR S++G +A+S+
Sbjct: 103 LMIMHEDCLQGNYESIEKLRKSNSGKEAISQ 133



 Score = 30.0 bits (66), Expect(2) = 2e-06
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -2

Query: 375 VDDPKESNTIEVEEGWCVVAGKKSKAR 295
           VD+ +   T+EVE+GW VV  +++K +
Sbjct: 171 VDEKQIRETVEVEDGWSVVGPRRNKGK 197


Top