BLASTX nr result

ID: Papaver29_contig00043785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00043785
         (517 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009590460.1| PREDICTED: probable E3 ubiquitin-protein lig...    62   2e-07
ref|XP_010260757.1| PREDICTED: probable E3 ubiquitin-protein lig...    59   1e-06
ref|XP_009793940.1| PREDICTED: probable E3 ubiquitin-protein lig...    58   2e-06

>ref|XP_009590460.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Nicotiana
           tomentosiformis]
          Length = 448

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 43/81 (53%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
 Frame = -1

Query: 271 TFLAR--CMSSSTSSKVPLLWQTEI-DSDTSISTXXXXXXXXXXXXXXXXGIEEIRAYPT 101
           TFL R    SSSTSSKVPLLW++EI DS  SI+T                GIEEIR YP+
Sbjct: 15  TFLRRRHLSSSSTSSKVPLLWKSEITDSSESITTVQLYSWGRGASGQLGGGIEEIRIYPS 74

Query: 100 AVASFHLPSNYRL-SPTSGLL 41
            VASF LP  +RL SP  G L
Sbjct: 75  PVASFSLPPTFRLSSPIPGRL 95


>ref|XP_010260757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Nelumbo
           nucifera]
          Length = 464

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
 Frame = -1

Query: 292 MTLHLRHTFLARCMSS--STSSKVPLLWQTEIDSDTSISTXXXXXXXXXXXXXXXXGIEE 119
           M   +R + LAR  SS  S+SSKVPLLW+TE +S    +T                GIEE
Sbjct: 1   MAHRIRCSSLARYFSSASSSSSKVPLLWKTEEES----TTVQLMSWGRGASGQLGGGIEE 56

Query: 118 IRAYPTAVASFHLPSNYRLSPTSGLLREPSAGSSAFE 8
           IR YPT VAS  LPS+++LSP  G  R P + +S F+
Sbjct: 57  IRLYPTPVASLALPSSFQLSPIPG--RLPPSDASDFK 91


>ref|XP_009793940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Nicotiana
           sylvestris]
          Length = 450

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 42/95 (44%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
 Frame = -1

Query: 319 KERSVLKSSMTLHLRHTFLARCMSSSTSSKVPLLWQTEI-DSDTSISTXXXXXXXXXXXX 143
           + RS+L      HL   +       STSSKVPLLW++EI DS  SI+T            
Sbjct: 9   RRRSLLTLLRRRHLSSPYF------STSSKVPLLWKSEITDSSESITTVQLYSWGRGASG 62

Query: 142 XXXXGIEEIRAYPTAVASFHLPSNYRL-SPTSGLL 41
               GIEEIR YP+ VASF LP  +RL SP  G L
Sbjct: 63  QLGGGIEEIRIYPSPVASFSLPPTFRLSSPIPGRL 97


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