BLASTX nr result
ID: Papaver29_contig00042267
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00042267
(1497 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009138115.1| PREDICTED: putative ribonuclease H protein A... 62 2e-06
ref|XP_009124085.1| PREDICTED: putative ribonuclease H protein A... 61 2e-06
ref|XP_013607275.1| PREDICTED: uncharacterized protein LOC106313... 61 3e-06
ref|XP_013710279.1| PREDICTED: uncharacterized protein LOC106414... 53 3e-06
ref|XP_013693841.1| PREDICTED: uncharacterized protein LOC106397... 59 9e-06
ref|XP_008355518.1| PREDICTED: putative ribonuclease H protein A... 52 9e-06
ref|XP_008245804.1| PREDICTED: uncharacterized protein LOC103343... 54 9e-06
>ref|XP_009138115.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 1081
Score = 61.6 bits (148), Expect = 2e-06
Identities = 26/79 (32%), Positives = 46/79 (58%)
Frame = -3
Query: 1213 TASAIPNTQMKALWNNVWSLDIPPMITVFLWKVSMTFLSVCARIGKVISNITTTCNLCKK 1034
TAS +P + + LW+N+W + P + F+W+ L+V R+ N+ TTC +C+
Sbjct: 738 TASNLPPVE-RNLWSNLWKVKTLPKVRHFMWRALAGALAVSERLASRGINVGTTCKVCQS 796
Query: 1033 ETETVDHLLMHCEVTNKIF 977
+ ET+ H+L HC V +++
Sbjct: 797 QPETICHVLFHCPVAKEVW 815
>ref|XP_009124085.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 578
Score = 61.2 bits (147), Expect = 2e-06
Identities = 25/79 (31%), Positives = 47/79 (59%)
Frame = -3
Query: 1213 TASAIPNTQMKALWNNVWSLDIPPMITVFLWKVSMTFLSVCARIGKVISNITTTCNLCKK 1034
+AS +P + + LW+N+W + + P + F+W+ L+V R+ N+ TTC +C+
Sbjct: 235 SASNLPPVE-RNLWSNLWKVKMLPKVRHFMWRALAGALAVSERLASRGINVETTCKVCQS 293
Query: 1033 ETETVDHLLMHCEVTNKIF 977
+ ET+ H+L HC V +++
Sbjct: 294 QPETICHVLFHCPVAKEVW 312
>ref|XP_013607275.1| PREDICTED: uncharacterized protein LOC106313893 [Brassica oleracea
var. oleracea]
Length = 501
Score = 60.8 bits (146), Expect = 3e-06
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = -3
Query: 1243 CVSSLYKKLDTASAIPNT-----QMKALWNNVWSLDIPPMITVFLWKVSMTFLSVCARIG 1079
C + L A++ P + Q K + N+W L+ PP I F W+V L V +
Sbjct: 256 CYNLLRNSFTQANSNPQSNENCNQQKEILKNIWKLNSPPKIKHFWWRVIHNALPVAENLR 315
Query: 1078 KVISNITTTCNLCKKETETVDHLLMHCEVTNKIF 977
+ I TC C +E+ETV+H+L HC ++ +I+
Sbjct: 316 RRKIQIEDTCQRCGEESETVNHMLFHCRISKEIW 349
>ref|XP_013710279.1| PREDICTED: uncharacterized protein LOC106414114 [Brassica napus]
Length = 1895
Score = 52.8 bits (125), Expect(3) = 3e-06
Identities = 30/83 (36%), Positives = 40/83 (48%)
Frame = -3
Query: 1246 FCVSSLYKKLDTASAIPNTQMKALWNNVWSLDIPPMITVFLWKVSMTFLSVCARIGKVIS 1067
F V S Y L T +P M+AL+N VW L P + VFLW VS + +
Sbjct: 1540 FSVKSAYAFL-TRDRVPRPNMEALYNRVWRLVAPERVRVFLWLVSHQVIMTNMERKRRHL 1598
Query: 1066 NITTTCNLCKKETETVDHLLMHC 998
+ C+LCK ET+ H+L C
Sbjct: 1599 SDNGVCSLCKNGDETILHVLRDC 1621
Score = 24.6 bits (52), Expect(3) = 3e-06
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -1
Query: 945 KTNTGSEGK*AIVISLWCVWKLRC*VIF 862
++ GS+ +++W WK RC +F
Sbjct: 1657 RSGNGSQWPTIFAVTVWWCWKWRCGYVF 1684
Score = 21.9 bits (45), Expect(3) = 3e-06
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 1437 KKGTGTEKQFIAKNTSVSSF*RPRSYIVEE*TNVRARQS 1321
+ GTG Q I TS+ R + ++++ T R R S
Sbjct: 1493 QNGTGWVTQVIEPYTSIHDRLRLAAMVIDDVTGARDRMS 1531
>ref|XP_013693841.1| PREDICTED: uncharacterized protein LOC106397765 [Brassica napus]
gi|923820116|ref|XP_013693847.1| PREDICTED:
uncharacterized protein LOC106397769 isoform X1 [Brassica
napus]
Length = 479
Score = 59.3 bits (142), Expect = 9e-06
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = -3
Query: 1243 CVSSLYKKLDTASAIPNT-----QMKALWNNVWSLDIPPMITVFLWKVSMTFLSVCARIG 1079
C + L A++ P + Q + + N+W L+ PP I F W+V L V +
Sbjct: 234 CYNLLRNSFTQANSNPQSNENCNQQEEILKNIWKLNSPPKIKHFWWRVIHNALPVAENLR 293
Query: 1078 KVISNITTTCNLCKKETETVDHLLMHCEVTNKIF 977
+ I TC C +E+ETV+H+L HC ++ +I+
Sbjct: 294 RRKIQIEDTCQRCGEESETVNHMLFHCRISKEIW 327
>ref|XP_008355518.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 952
Score = 52.4 bits (124), Expect(2) = 9e-06
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = -3
Query: 1177 LWNNVWSLDIPPMITVFLWKVSMTFLSVCARIGKVISNITTTCNLCKKETETVDHLLMHC 998
LW +W LD+PP + F+WK L+V + + +I C LC ET HL +C
Sbjct: 628 LWKXIWLLDVPPKLXFFMWKAGRRALAVRHNLERRRIHILNRCELCGVNDETEAHLFFNC 687
Query: 997 EVTNKIF 977
E + +
Sbjct: 688 EFSRSFW 694
Score = 26.6 bits (57), Expect(2) = 9e-06
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = -1
Query: 912 IVISLWCVWKLRC*VIFEGTKVEQKLSYXXXXXXXXXXXXXXXNSSKGAGA 760
+V W +WK R + F+G E +++ S +G GA
Sbjct: 735 VVFGFWRIWKCRNDLFFKGVTTEPRVAVELWHRHVEEFRTASDTSERGTGA 785
>ref|XP_008245804.1| PREDICTED: uncharacterized protein LOC103343954 [Prunus mume]
Length = 455
Score = 53.9 bits (128), Expect(2) = 9e-06
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = -3
Query: 1177 LWNNVWSLDIPPMITVFLWKVSMTFLSVCARIGKVISNITTTCNLCKKETETVDHLLMHC 998
+W ++W L +PP I FLWK L+V + ++ TTC LC +E E+ HL C
Sbjct: 181 IWKSIWGLPVPPKIRTFLWKCCRNVLAVKENLLHRGIDVDTTCTLCGREGESQVHLFFTC 240
Query: 997 E 995
E
Sbjct: 241 E 241
Score = 25.0 bits (53), Expect(2) = 9e-06
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 966 SLDNSYFKTNTGSEGK*AIVISLWCVWKLRC*VIFEG 856
+L + Y + SE A LW +WK R ++FEG
Sbjct: 270 NLLSKYEQVEHYSEILQACAFGLWRIWKTRNGMVFEG 306