BLASTX nr result

ID: Papaver29_contig00042152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00042152
         (713 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006300703.1| hypothetical protein CARUB_v10019753mg [Caps...    58   7e-06
ref|XP_006301496.1| hypothetical protein CARUB_v10021922mg, part...    57   9e-06

>ref|XP_006300703.1| hypothetical protein CARUB_v10019753mg [Capsella rubella]
            gi|482569413|gb|EOA33601.1| hypothetical protein
            CARUB_v10019753mg [Capsella rubella]
          Length = 911

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
 Frame = -1

Query: 620  FPSLTTLIMDKLENLEEWFAPDNSFPCLEEVQIRWCGNLTSIPGLRLWTSSLRFLTIRG- 444
            FP L  L +D+ E LEEW   + S PCL  + +  C  L  IPG   + +SL+ L+I+  
Sbjct: 820  FPQLRALKLDEQEELEEWIVEEGSMPCLHSLSLIGCKMLKEIPGGLKYITSLKELSIKSM 879

Query: 443  ----SEKLEKEPIEYYLHKFLPTVNYTR 372
                 EKL +   +YY  + +P + +T+
Sbjct: 880  KRSWKEKLSEGGEDYYKVQHIPRIQFTK 907


>ref|XP_006301496.1| hypothetical protein CARUB_v10021922mg, partial [Capsella rubella]
            gi|482570206|gb|EOA34394.1| hypothetical protein
            CARUB_v10021922mg, partial [Capsella rubella]
          Length = 882

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
 Frame = -1

Query: 620  FPSLTTLIMDKLENLEEWFAPDNSFPCLEEVQIRWCGNLTSIP---GLRLWTSSLRFLTI 450
            FP L  L +D +  LEEW   + S PCL  + +R C NL  +P   GLR  T SL+  TI
Sbjct: 785  FPKLQILRLDSIPKLEEWTVEEGSMPCLHTLYLRRCSNLKKLPLPDGLRFIT-SLKEFTI 843

Query: 449  RGSE-----KLEKEPIEYYLHKFLPTVNYTRD 369
            R  E     K+ K   +YY  + +P + Y  D
Sbjct: 844  RTKERELQNKVSKGGEDYYKIQHIPLIRYDWD 875


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