BLASTX nr result

ID: Papaver29_contig00042140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00042140
         (1027 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008384046.1| PREDICTED: F-box/FBD/LRR-repeat protein At2g...    51   4e-09
ref|XP_008358745.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g...    51   8e-09

>ref|XP_008384046.1| PREDICTED: F-box/FBD/LRR-repeat protein At2g26030-like isoform X1
           [Malus domestica]
          Length = 158

 Score = 50.8 bits (120), Expect(2) = 4e-09
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = -2

Query: 399 PECLFQNLQSVNITEFMGKPV-EMRWVKFILKNAKALQTMSISNFFHT*RLKNTERKEEL 223
           P C   +L+ + + EF G    E+  V+ +LKNAK L+ + IS +F        E+K E+
Sbjct: 84  PPCFLSHLKRIEVAEFNGDQYNELNAVRILLKNAKVLKKLDISWYFTA----GAEQKAEI 139

Query: 222 TVEIPSFPRASISC 181
           T ++  FPRAS SC
Sbjct: 140 TKQVFDFPRASGSC 153



 Score = 38.9 bits (89), Expect(2) = 4e-09
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = -3

Query: 575 ADNLLENLPTFHNAKQLMMSEEV-TDDKALVALLKATPYLESLVFDKAAMLIGHWM 411
           A  LL  +P F+N    ++ +    DDKAL+ +L+  P+LE+L+F +   L   W+
Sbjct: 19  APELLSKMPLFNNLTTFVLEDAAFIDDKALLTMLRYFPHLETLIFAEGIGLSPEWV 74


>ref|XP_008358745.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g56420-like [Malus
           domestica]
          Length = 459

 Score = 50.8 bits (120), Expect(2) = 8e-09
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = -2

Query: 399 PECLFQNLQSVNITEFMGKPV-EMRWVKFILKNAKALQTMSISNFFHT*RLKNTERKEEL 223
           P C   +L+ + + EF G    E+  V+ +LKNAK L+ + IS +F        E+K E+
Sbjct: 385 PPCFLSHLKRIEVAEFNGDQYNELNAVRILLKNAKVLKKLDISWYFTA----GAEQKAEI 440

Query: 222 TVEIPSFPRASISC 181
           T ++  FPRAS SC
Sbjct: 441 TKQVFDFPRASGSC 454



 Score = 37.7 bits (86), Expect(2) = 8e-09
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = -3

Query: 575 ADNLLENLPTFHNAKQLMMSEEV-TDDKALVALLKATPYLESLVFDKAAMLIGHWM 411
           A  LL  +P F+N    ++ +    DDKAL+ +L+  P+LE+L+F +   L   W+
Sbjct: 320 APELLSKMPMFNNLTTFVLEDAAFIDDKALLTMLQYFPHLETLIFVEGFGLSPEWV 375


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