BLASTX nr result
ID: Papaver29_contig00042122
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00042122
(499 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006373668.1| hypothetical protein POPTR_0016s02630g [Popu... 54 4e-14
ref|XP_002263209.2| PREDICTED: putative pentatricopeptide repeat... 60 5e-14
pdb|4OZS|A Chain A, Rna Binding Protein 53 5e-14
emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera] 58 9e-14
ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat... 58 9e-14
ref|XP_010531717.1| PREDICTED: pentatricopeptide repeat-containi... 54 3e-13
ref|XP_010531721.1| PREDICTED: pentatricopeptide repeat-containi... 54 3e-13
ref|XP_012441343.1| PREDICTED: pentatricopeptide repeat-containi... 53 4e-13
gb|KJB61701.1| hypothetical protein B456_009G375400 [Gossypium r... 53 4e-13
ref|XP_012441344.1| PREDICTED: pentatricopeptide repeat-containi... 53 4e-13
gb|KJB61702.1| hypothetical protein B456_009G375400 [Gossypium r... 53 4e-13
ref|XP_012441345.1| PREDICTED: pentatricopeptide repeat-containi... 53 4e-13
ref|XP_012487249.1| PREDICTED: pentatricopeptide repeat-containi... 52 7e-13
ref|XP_010531711.1| PREDICTED: pentatricopeptide repeat-containi... 55 7e-13
ref|XP_010529542.1| PREDICTED: pentatricopeptide repeat-containi... 51 9e-13
ref|XP_006371715.1| hypothetical protein POPTR_0018s00690g [Popu... 54 3e-12
ref|XP_010539050.1| PREDICTED: pentatricopeptide repeat-containi... 54 3e-12
ref|XP_010539051.1| PREDICTED: pentatricopeptide repeat-containi... 54 3e-12
ref|XP_011048493.1| PREDICTED: putative pentatricopeptide repeat... 52 4e-12
ref|XP_011041406.1| PREDICTED: putative pentatricopeptide repeat... 52 4e-12
>ref|XP_006373668.1| hypothetical protein POPTR_0016s02630g [Populus trichocarpa]
gi|550320670|gb|ERP51465.1| hypothetical protein
POPTR_0016s02630g [Populus trichocarpa]
Length = 585
Score = 54.3 bits (129), Expect(2) = 4e-14
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
++GKI AV+ FD+M+ERG N T TII L ++GE A+ LL+ M C+ +V
Sbjct: 127 IKGKIARAVEFFDEMVERGYPPNLHTYTTIIKGLCKIGETPVAVGLLKKMDNAGCQPNVV 186
Query: 349 SY 354
+Y
Sbjct: 187 TY 188
Score = 50.1 bits (118), Expect(2) = 4e-14
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
L+D+L K LV EAL +FSEM + PNV+ YNSL+ GLC +D+ EA
Sbjct: 191 LIDSLCKDRLVKEALDIFSEM-KSKGIQPNVVTYNSLMHGLCNSDQQEEA 239
Score = 48.5 bits (114), Expect(2) = 8e-11
Identities = 21/50 (42%), Positives = 37/50 (74%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
L+D L K+G +D+AL+LF EM ++ + P++++YN LI +CK+ +L +A
Sbjct: 401 LLDGLSKQGCLDQALELFQEM-QNNYLNPDLVIYNILIDAMCKSGKLEDA 449
Score = 44.7 bits (104), Expect(2) = 8e-11
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +1
Query: 163 CTVQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEAT 342
C +I A ++FD+M RG+ NT + NT+I+ L +VG + A +L ++M C
Sbjct: 335 CCKAQRIDEAKQIFDEMSFRGLIPNTASYNTLISGLFQVGRILEAKELFKDMHAQGCSPD 394
Query: 343 IVSY 354
+V+Y
Sbjct: 395 LVTY 398
>ref|XP_002263209.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Vitis vinifera]
Length = 592
Score = 60.5 bits (145), Expect(2) = 5e-14
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
V+GKI A+ LFDKM+ G Q N +T T+I L +VG A++LLR+M + NCE ++
Sbjct: 156 VEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVI 215
Query: 349 SY 354
+Y
Sbjct: 216 TY 217
Score = 43.5 bits (101), Expect(2) = 5e-14
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCK 478
++D L K V+EAL +FSEMI + PNV YNS+I GLCK
Sbjct: 220 IIDCLFKDRQVNEALNIFSEMIA-KGISPNVSTYNSIIHGLCK 261
>pdb|4OZS|A Chain A, Rna Binding Protein
Length = 175
Score = 52.8 bits (125), Expect(2) = 5e-14
Identities = 23/60 (38%), Positives = 41/60 (68%)
Frame = +1
Query: 175 GKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIVSY 354
G+++ A++LF +M E+GV+ + +T NT+I L++ G LE ALQL + M + + +V+Y
Sbjct: 16 GRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTY 75
Score = 52.8 bits (125), Expect(2) = 5e-14
Identities = 23/60 (38%), Positives = 41/60 (68%)
Frame = +1
Query: 175 GKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIVSY 354
G+++ A++LF +M E+GV+ + +T NT+I L++ G LE ALQL + M + + +V+Y
Sbjct: 51 GRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTY 110
Score = 51.2 bits (121), Expect(2) = 5e-14
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
L+D L K G ++EALQLF EM + V P+V+ YN+LI GL K RL EA
Sbjct: 78 LIDGLAKAGRLEEALQLFQEM-KEKGVKPDVVTYNTLIDGLAKAGRLEEA 126
Score = 51.2 bits (121), Expect(2) = 5e-14
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
L+D L K G ++EALQLF EM + V P+V+ YN+LI GL K RL EA
Sbjct: 113 LIDGLAKAGRLEEALQLFQEM-KEKGVKPDVVTYNTLIDGLAKAGRLEEA 161
Score = 51.2 bits (121), Expect(2) = 9e-09
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
L+D L K G ++EALQLF EM + V P+V+ YN+LI GL K RL EA
Sbjct: 43 LIDGLAKAGRLEEALQLFQEM-KEKGVKPDVVTYNTLIDGLAKAGRLEEA 91
Score = 35.0 bits (79), Expect(2) = 9e-09
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 235 NTITCNTIITALSRVGELENALQLLRNMAKLNCEATIVSY 354
+ +T NT+I L++ G LE ALQL + M + + +V+Y
Sbjct: 1 DVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTY 40
Score = 52.8 bits (125), Expect(2) = 2e-07
Identities = 23/60 (38%), Positives = 41/60 (68%)
Frame = +1
Query: 175 GKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIVSY 354
G+++ A++LF +M E+GV+ + +T NT+I L++ G LE ALQL + M + + +V+Y
Sbjct: 86 GRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTY 145
Score = 29.3 bits (64), Expect(2) = 2e-07
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEM 412
L+D L K G ++EALQLF EM
Sbjct: 148 LIDGLAKAGRLEEALQLFQEM 168
>emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 58.2 bits (139), Expect(2) = 9e-14
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
V+GKI A+ LFDKMI G Q N +T T+I L +VG A++LLR+M + NC+ +V
Sbjct: 152 VEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVV 211
Query: 349 SY 354
+
Sbjct: 212 VF 213
Score = 45.1 bits (105), Expect(2) = 9e-14
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCK 478
L+D+L K V EA +FSEMI + PN++ YNSLI GLCK
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMIT-KGISPNIVTYNSLIHGLCK 257
Score = 41.6 bits (96), Expect(2) = 7e-07
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Frame = +1
Query: 139 IASLLG*NCTVQG--KIQS---AVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQ 303
+A+++ N + G KIQS A+ LF++M + + NT+T NT+I L VG L++A+
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406
Query: 304 LLRNMAKLNCEATIVSY 354
L M +V+Y
Sbjct: 407 LFHEMVARGQIPDLVTY 423
Score = 38.1 bits (87), Expect(2) = 7e-07
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
++D + + G +++A LFS + + PNV YN +I GLCK L+EA
Sbjct: 461 ILDGMCRAGELEDARDLFSNL-SSKGLQPNVWTYNIMIHGLCKQGLLAEA 509
>ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Vitis vinifera]
Length = 588
Score = 58.2 bits (139), Expect(2) = 9e-14
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
V+GKI A+ LFDKMI G Q N +T T+I L +VG A++LLR+M + NC+ +V
Sbjct: 152 VEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVV 211
Query: 349 SY 354
+
Sbjct: 212 VF 213
Score = 45.1 bits (105), Expect(2) = 9e-14
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCK 478
L+D+L K V EA +FSEMI + PN++ YNSLI GLCK
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMIT-KGISPNIVTYNSLIHGLCK 257
Score = 41.6 bits (96), Expect(2) = 7e-07
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Frame = +1
Query: 139 IASLLG*NCTVQG--KIQS---AVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQ 303
+A+++ N + G KIQS A+ LF++M + + NT+T NT+I L VG L++A+
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406
Query: 304 LLRNMAKLNCEATIVSY 354
L M +V+Y
Sbjct: 407 LFHEMVARGQIPDLVTY 423
Score = 38.1 bits (87), Expect(2) = 7e-07
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
++D + + G +++A LFS + + PNV YN +I GLCK L+EA
Sbjct: 461 ILDGMCRAGELEDARDLFSNL-SSKGLQPNVWTYNIMIHGLCKQGLLAEA 509
>ref|XP_010531717.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X1 [Tarenaya hassleriana]
gi|729315907|ref|XP_010531718.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X1 [Tarenaya hassleriana]
gi|729315910|ref|XP_010531719.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X1 [Tarenaya hassleriana]
gi|729315913|ref|XP_010531720.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X1 [Tarenaya hassleriana]
Length = 536
Score = 54.3 bits (129), Expect(2) = 3e-13
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
+ GKI +A+ L D+M+E G + N +T +T+I L G + AL L M K++C+ +V
Sbjct: 174 IHGKISAALSLVDQMVEEGYKPNVVTFSTLINGLCLEGRVSEALSLFDQMLKMDCQPNVV 233
Query: 349 SYG 357
++G
Sbjct: 234 TFG 236
Score = 47.0 bits (110), Expect(2) = 3e-13
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSE 496
++D L K G VD AL LF +M D ++P+V+ +NS+I+G CK +R+ E
Sbjct: 273 IIDYLCKAGHVDGALNLFGKM-DSCGIVPDVVTFNSMINGYCKANRVDE 320
Score = 50.4 bits (119), Expect(2) = 9e-08
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
+M L K G VDEAL LF++++D V PNVI+YN +ISGLC D L EA
Sbjct: 413 MMHGLCKVGRVDEALILFNKLLD-RGVKPNVIMYNIMISGLCGKDSLYEA 461
Score = 32.3 bits (72), Expect(2) = 9e-08
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +1
Query: 178 KIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIVSY 354
++ + LF +M RG+ + +T N +I R+G L+ A ++ M +V+Y
Sbjct: 317 RVDEGINLFYEMSRRGLVADVVTYNILIQGFYRIGNLDVAQKVFMEMQYKGHRPDLVTY 375
>ref|XP_010531721.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X2 [Tarenaya hassleriana]
Length = 531
Score = 54.3 bits (129), Expect(2) = 3e-13
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
+ GKI +A+ L D+M+E G + N +T +T+I L G + AL L M K++C+ +V
Sbjct: 169 IHGKISAALSLVDQMVEEGYKPNVVTFSTLINGLCLEGRVSEALSLFDQMLKMDCQPNVV 228
Query: 349 SYG 357
++G
Sbjct: 229 TFG 231
Score = 47.0 bits (110), Expect(2) = 3e-13
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSE 496
++D L K G VD AL LF +M D ++P+V+ +NS+I+G CK +R+ E
Sbjct: 268 IIDYLCKAGHVDGALNLFGKM-DSCGIVPDVVTFNSMINGYCKANRVDE 315
Score = 50.4 bits (119), Expect(2) = 9e-08
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
+M L K G VDEAL LF++++D V PNVI+YN +ISGLC D L EA
Sbjct: 408 MMHGLCKVGRVDEALILFNKLLD-RGVKPNVIMYNIMISGLCGKDSLYEA 456
Score = 32.3 bits (72), Expect(2) = 9e-08
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +1
Query: 178 KIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIVSY 354
++ + LF +M RG+ + +T N +I R+G L+ A ++ M +V+Y
Sbjct: 312 RVDEGINLFYEMSRRGLVADVVTYNILIQGFYRIGNLDVAQKVFMEMQYKGHRPDLVTY 370
>ref|XP_012441343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Gossypium raimondii]
Length = 621
Score = 53.1 bits (126), Expect(2) = 4e-13
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
+Q KI A+ +FD M ERG QL+ I NTI+ L ++G + A + LR M E IV
Sbjct: 159 IQSKISEAISIFDGMTERGYQLDLIVYNTILKGLCKIGNTDRAARFLRLMEGTGFEPDIV 218
Query: 349 SYG----CFRKK 372
+Y C KK
Sbjct: 219 AYNTILDCLCKK 230
Score = 47.8 bits (112), Expect(2) = 4e-13
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
++D L K+GL+ EAL LFSEM + P++I YN LI G+C + R EA
Sbjct: 223 ILDCLCKKGLLKEALNLFSEM-KVKGIRPDIITYNCLIHGMCNSGRQEEA 271
>gb|KJB61701.1| hypothetical protein B456_009G375400 [Gossypium raimondii]
Length = 621
Score = 53.1 bits (126), Expect(2) = 4e-13
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
+Q KI A+ +FD M ERG QL+ I NTI+ L ++G + A + LR M E IV
Sbjct: 159 IQSKISEAISIFDGMTERGYQLDLIVYNTILKGLCKIGNTDRAARFLRLMEGTGFEPDIV 218
Query: 349 SYG----CFRKK 372
+Y C KK
Sbjct: 219 AYNTILDCLCKK 230
Score = 47.8 bits (112), Expect(2) = 4e-13
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
++D L K+GL+ EAL LFSEM + P++I YN LI G+C + R EA
Sbjct: 223 ILDCLCKKGLLKEALNLFSEM-KVKGIRPDIITYNCLIHGMCNSGRQEEA 271
>ref|XP_012441344.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X2 [Gossypium raimondii]
Length = 591
Score = 53.1 bits (126), Expect(2) = 4e-13
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
+Q KI A+ +FD M ERG QL+ I NTI+ L ++G + A + LR M E IV
Sbjct: 129 IQSKISEAISIFDGMTERGYQLDLIVYNTILKGLCKIGNTDRAARFLRLMEGTGFEPDIV 188
Query: 349 SYG----CFRKK 372
+Y C KK
Sbjct: 189 AYNTILDCLCKK 200
Score = 47.8 bits (112), Expect(2) = 4e-13
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
++D L K+GL+ EAL LFSEM + P++I YN LI G+C + R EA
Sbjct: 193 ILDCLCKKGLLKEALNLFSEM-KVKGIRPDIITYNCLIHGMCNSGRQEEA 241
>gb|KJB61702.1| hypothetical protein B456_009G375400 [Gossypium raimondii]
Length = 591
Score = 53.1 bits (126), Expect(2) = 4e-13
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
+Q KI A+ +FD M ERG QL+ I NTI+ L ++G + A + LR M E IV
Sbjct: 129 IQSKISEAISIFDGMTERGYQLDLIVYNTILKGLCKIGNTDRAARFLRLMEGTGFEPDIV 188
Query: 349 SYG----CFRKK 372
+Y C KK
Sbjct: 189 AYNTILDCLCKK 200
Score = 47.8 bits (112), Expect(2) = 4e-13
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
++D L K+GL+ EAL LFSEM + P++I YN LI G+C + R EA
Sbjct: 193 ILDCLCKKGLLKEALNLFSEM-KVKGIRPDIITYNCLIHGMCNSGRQEEA 241
>ref|XP_012441345.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like isoform X3 [Gossypium raimondii]
Length = 568
Score = 53.1 bits (126), Expect(2) = 4e-13
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
+Q KI A+ +FD M ERG QL+ I NTI+ L ++G + A + LR M E IV
Sbjct: 159 IQSKISEAISIFDGMTERGYQLDLIVYNTILKGLCKIGNTDRAARFLRLMEGTGFEPDIV 218
Query: 349 SYG----CFRKK 372
+Y C KK
Sbjct: 219 AYNTILDCLCKK 230
Score = 47.8 bits (112), Expect(2) = 4e-13
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
++D L K+GL+ EAL LFSEM + P++I YN LI G+C + R EA
Sbjct: 223 ILDCLCKKGLLKEALNLFSEM-KVKGIRPDIITYNCLIHGMCNSGRQEEA 271
>ref|XP_012487249.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Gossypium raimondii]
gi|763771076|gb|KJB38291.1| hypothetical protein
B456_006G247100 [Gossypium raimondii]
Length = 638
Score = 52.4 bits (124), Expect(2) = 7e-13
Identities = 33/76 (43%), Positives = 42/76 (55%)
Frame = +1
Query: 130 YSNIASLLG*NCTVQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLL 309
Y+ + LL C V+GK AV++F KM ERG Q + T +I L +GE AL L
Sbjct: 143 YATLGRLLKGLC-VEGKGFEAVQVFAKMRERGFQGDVFTYGILIYGLCSIGESCPALNLF 201
Query: 310 RNMAKLNCEATIVSYG 357
R MAK NCE + YG
Sbjct: 202 RKMAKRNCEGYLRIYG 217
Score = 47.8 bits (112), Expect(2) = 7e-13
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 359 ALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
+L K LVDE L LF EM+ + P+V+VY+SL+SGLC RL EA
Sbjct: 222 SLYKDKLVDEGLNLFFEMVS-KGITPDVVVYSSLVSGLCSLGRLKEA 267
Score = 39.3 bits (90), Expect(2) = 1e-05
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1
Query: 130 YSNIASLLG*NCTVQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLL 309
YS++ S L C++ G+++ AVK FD+MI RG+ + + N +I SR G + A+++
Sbjct: 251 YSSLVSGL---CSL-GRLKEAVKFFDEMIGRGIAADLVMYNLLIHGFSREGMWKEAIRIF 306
Query: 310 RNM 318
M
Sbjct: 307 DRM 309
Score = 36.6 bits (83), Expect(2) = 1e-05
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
L+ L K+G+V +A ++F+ M + P + YNSL+ GLC+ +L EA
Sbjct: 324 LISCLCKKGMVVKAHEMFAFM-RQKEMKPTLFTYNSLMDGLCRAGQLDEA 372
>ref|XP_010531711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X1 [Tarenaya hassleriana]
Length = 537
Score = 55.5 bits (132), Expect(2) = 7e-13
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
+ GKI +A+ L D+M+E G + N +T +T+I L G + AL LL M K++C+ +V
Sbjct: 175 IHGKISAALSLVDQMVEEGYKPNVVTFSTLINGLCLEGRVSEALSLLDQMQKMDCQPDVV 234
Query: 349 SYG 357
++G
Sbjct: 235 TFG 237
Score = 44.7 bits (104), Expect(2) = 7e-13
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSE 496
++D L K G V+ AL LF +M ++PNV+ +NS+I+G CK++R+ +
Sbjct: 274 IIDYLCKTGHVEGALNLFGKM-SSCGIVPNVVTFNSMINGYCKSNRVDK 321
Score = 48.9 bits (115), Expect(2) = 6e-06
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSE 496
+M L K G VDEAL LF++++D V PNVI+YN +ISGLC D L E
Sbjct: 414 MMHGLCKVGRVDEALILFNKLLD-RGVKPNVIMYNIMISGLCGKDSLYE 461
Score = 27.7 bits (60), Expect(2) = 6e-06
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +1
Query: 178 KIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIVSY 354
++ + LF +M R + + IT N +I RVG + A ++ M +V+Y
Sbjct: 318 RVDKGINLFYEMSRRELVADAITYNILIQGFYRVGNVGAAQKVFMEMQYKGHRPDLVTY 376
>ref|XP_010529542.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Tarenaya hassleriana]
gi|729309280|ref|XP_010529543.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Tarenaya hassleriana]
Length = 560
Score = 50.8 bits (120), Expect(2) = 9e-13
Identities = 20/62 (32%), Positives = 40/62 (64%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
+QGK+ +A+ L D++++ G + N +T NT++ R G + A+ L+ M K++C+ +V
Sbjct: 92 IQGKLSTALILVDQIVKDGYKPNVVTYNTLVNRFCREGRVSEAVSLVDRMLKMDCKPNVV 151
Query: 349 SY 354
+Y
Sbjct: 152 TY 153
Score = 48.9 bits (115), Expect(2) = 9e-13
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSE 496
++D L K G +D+AL LF +M D+ V+PNV+ Y+ LI+GLC DR ++
Sbjct: 191 IIDGLCKGGHIDDALNLFQKM-DNKGVVPNVVTYSCLINGLCVFDRWND 238
Score = 43.5 bits (101), Expect(2) = 3e-08
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = +1
Query: 160 NCTVQG-----KIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAK 324
+C + G K+ +KLF +M RG+ NT T NT+I RVG + A +L+ M +
Sbjct: 329 SCLINGYCKSNKVDEGMKLFHEMSRRGMVSNTYTYNTLIQGFFRVGNAKVAQKLVLEMQR 388
Query: 325 LNCEATIVSY 354
+ + +V+Y
Sbjct: 389 QSVDPDVVTY 398
Score = 40.8 bits (94), Expect(2) = 3e-08
Identities = 20/50 (40%), Positives = 35/50 (70%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
++D L K G +DEAL+L+ ++ + S + ++ V+N +I+GL K DR+ EA
Sbjct: 401 MLDGLCKNGKLDEALELYCKL-ETSGIDIDIFVHNVMINGLWKADRVDEA 449
>ref|XP_006371715.1| hypothetical protein POPTR_0018s00690g [Populus trichocarpa]
gi|550317736|gb|ERP49512.1| hypothetical protein
POPTR_0018s00690g [Populus trichocarpa]
Length = 555
Score = 52.4 bits (124), Expect(2) = 3e-12
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
++GK AV+ FD+M+ERG + N T T+I L ++G+ A++LL+ M C+ +V
Sbjct: 128 IEGKFARAVEFFDEMVERGYRPNLHTYTTVIKGLCKIGKTPVAVELLKKMDNEGCQPDVV 187
Query: 349 SY 354
+Y
Sbjct: 188 TY 189
Score = 45.8 bits (107), Expect(2) = 3e-12
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
++D+L K LV EA +FS M + PNV++YNSL+ GLC +D EA
Sbjct: 192 IIDSLCKDRLVKEAFDIFSAM-KGKGIQPNVVIYNSLMHGLCNSDHQEEA 240
Score = 54.3 bits (129), Expect(2) = 8e-12
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
L+D L K+G +DEAL+LF EM +S + PN+++YN LI +CK+ +L EA
Sbjct: 402 LLDGLSKQGYIDEALELFREM-QNSYLKPNLVIYNILIDAMCKSGKLEEA 450
Score = 42.4 bits (98), Expect(2) = 8e-12
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +1
Query: 163 CTVQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEAT 342
C +I A +LFD++ RG+ NT + NT+I L +VG + A L ++M C
Sbjct: 336 CCKAQRIDEAKQLFDEISFRGLIPNTASYNTLINGLCQVGRILEAKYLFKDMHAQGCSPD 395
Query: 343 IVSY 354
+++Y
Sbjct: 396 LITY 399
>ref|XP_010539050.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X1 [Tarenaya hassleriana]
Length = 537
Score = 54.3 bits (129), Expect(2) = 3e-12
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
+ GKI +A+ L D+M+E G + N +T +T+I L G + AL L M K++C+ +V
Sbjct: 175 IHGKISAALSLVDQMVEEGYKPNVVTFSTLINGLCLEGRVSEALSLFDQMLKMDCQPNVV 234
Query: 349 SYG 357
++G
Sbjct: 235 TFG 237
Score = 43.5 bits (101), Expect(2) = 3e-12
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSE 496
++D L K G VD AL LF +M ++P+V+ +NS+I+G CK +R+ E
Sbjct: 274 IIDYLCKVGHVDGALNLFGKM-GSCGIVPDVVTFNSIINGYCKANRVDE 321
Score = 50.4 bits (119), Expect(2) = 2e-07
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
+M L K G VDEAL LF++++D V PNVI+YN +ISGLC D L EA
Sbjct: 414 MMHGLCKVGRVDEALILFNKLLD-RGVKPNVIMYNIMISGLCGKDSLYEA 462
Score = 31.6 bits (70), Expect(2) = 2e-07
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 178 KIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIVSY 354
++ + LF +M RG+ + +T N +I RVG L A ++ M +V+Y
Sbjct: 318 RVDEGINLFYEMSRRGLVADVVTYNILIQGFYRVGNLGAAQKVFMEMQYKGHSPDLVTY 376
>ref|XP_010539051.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X2 [Tarenaya hassleriana]
Length = 532
Score = 54.3 bits (129), Expect(2) = 3e-12
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
+ GKI +A+ L D+M+E G + N +T +T+I L G + AL L M K++C+ +V
Sbjct: 170 IHGKISAALSLVDQMVEEGYKPNVVTFSTLINGLCLEGRVSEALSLFDQMLKMDCQPNVV 229
Query: 349 SYG 357
++G
Sbjct: 230 TFG 232
Score = 43.5 bits (101), Expect(2) = 3e-12
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSE 496
++D L K G VD AL LF +M ++P+V+ +NS+I+G CK +R+ E
Sbjct: 269 IIDYLCKVGHVDGALNLFGKM-GSCGIVPDVVTFNSIINGYCKANRVDE 316
Score = 50.4 bits (119), Expect(2) = 2e-07
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
+M L K G VDEAL LF++++D V PNVI+YN +ISGLC D L EA
Sbjct: 409 MMHGLCKVGRVDEALILFNKLLD-RGVKPNVIMYNIMISGLCGKDSLYEA 457
Score = 31.6 bits (70), Expect(2) = 2e-07
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 178 KIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIVSY 354
++ + LF +M RG+ + +T N +I RVG L A ++ M +V+Y
Sbjct: 313 RVDEGINLFYEMSRRGLVADVVTYNILIQGFYRVGNLGAAQKVFMEMQYKGHSPDLVTY 371
>ref|XP_011048493.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Populus euphratica]
gi|743909996|ref|XP_011048494.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g12700,
mitochondrial [Populus euphratica]
Length = 621
Score = 52.4 bits (124), Expect(2) = 4e-12
Identities = 25/62 (40%), Positives = 38/62 (61%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
V+G+I AV+ F+ M+ RG + N T NTII L ++G+ A LL+ M + CE +V
Sbjct: 178 VEGRIARAVEFFNDMVARGYEPNLHTYNTIINGLCKIGDTSVAAGLLKKMDEAGCEPDVV 237
Query: 349 SY 354
+Y
Sbjct: 238 TY 239
Score = 45.1 bits (105), Expect(2) = 4e-12
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
++D L K LV+EAL +FS+M S+ P+VI Y SL+ GLC +D+ EA
Sbjct: 242 IIDNLCKDRLVNEALDIFSQM-KGKSIEPDVITYTSLMHGLCNSDQWKEA 290
>ref|XP_011041406.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Populus euphratica]
Length = 433
Score = 52.4 bits (124), Expect(2) = 4e-12
Identities = 25/62 (40%), Positives = 38/62 (61%)
Frame = +1
Query: 169 VQGKIQSAVKLFDKMIERGVQLNTITCNTIITALSRVGELENALQLLRNMAKLNCEATIV 348
V+G+I AV+ F+ M+ RG + N T NTII L ++G+ A LL+ M + CE +V
Sbjct: 56 VEGRIARAVEFFNDMVARGYEPNLHTYNTIINGLCKIGDTSVAAGLLKKMDEAGCEPDVV 115
Query: 349 SY 354
+Y
Sbjct: 116 TY 117
Score = 45.1 bits (105), Expect(2) = 4e-12
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +2
Query: 350 LMDALGKRGLVDEALQLFSEMIDDSSVIPNVIVYNSLISGLCKNDRLSEA 499
++D L K LV+EAL +FS+M S+ P+VI Y SL+ GLC +D+ EA
Sbjct: 120 IIDNLCKDRLVNEALDIFSQM-KGKSIEPDVITYTSLMHGLCNSDQWKEA 168