BLASTX nr result

ID: Papaver29_contig00040913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00040913
         (3162 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013459999.1| F-box protein interaction domain protein [Me...    70   2e-08
ref|XP_009142101.1| PREDICTED: putative F-box protein At1g33530 ...    67   8e-08
emb|CDY40415.1| BnaA04g21020D [Brassica napus]                         67   8e-08
ref|XP_012069912.1| PREDICTED: F-box/kelch-repeat protein At3g06...    65   3e-07
ref|XP_013460000.1| F-box protein interaction domain protein [Me...    62   4e-06
ref|XP_011462060.1| PREDICTED: F-box/kelch-repeat protein At3g23...    61   6e-06
ref|NP_174618.1| F-box protein [Arabidopsis thaliana] gi|7526838...    61   6e-06

>ref|XP_013459999.1| F-box protein interaction domain protein [Medicago truncatula]
            gi|657393188|gb|KEH34030.1| F-box protein interaction
            domain protein [Medicago truncatula]
          Length = 374

 Score = 69.7 bits (169), Expect = 2e-08
 Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
 Frame = -3

Query: 3094 HYIFRLLFNLEFKLKSELVGYCNGFACITEKRKN-VDGPNLTVINPVREETLSLPYYKYP 2918
            HY F  L+N        +VG CNG  C+ +K  N V   N+ + NP   ++  LP +K  
Sbjct: 129  HYPFDPLYN-------NIVGSCNGILCLDKKDSNIVKQSNVILWNPSIRKSKILPSFKI- 180

Query: 2917 TDKGECKYLCHGFGFDSSTDTYKVVIIFTSR-GDE--ELISMAFTLGTNSWR 2771
              +GEC ++ +GFG+D   D YKVV +F+   G+E  +   M  TLGTNSWR
Sbjct: 181  --QGECGFVKYGFGYDHVNDVYKVVAVFSYYCGNEGFKTQGMVHTLGTNSWR 230


>ref|XP_009142101.1| PREDICTED: putative F-box protein At1g33530 [Brassica rapa]
            gi|923616822|ref|XP_013746178.1| PREDICTED: putative
            F-box protein At1g33530 [Brassica napus]
          Length = 388

 Score = 67.4 bits (163), Expect = 8e-08
 Identities = 51/179 (28%), Positives = 74/179 (41%)
 Frame = -3

Query: 3043 LVGYCNGFACITEKRKNVDGPNLTVINPVREETLSLPYYKYPTDKGECKYLCHGFGFDSS 2864
            + G CNG  C+ E    +D  N+ + NP+   T +L       +K     L  GFG D  
Sbjct: 140  VAGSCNGLVCVHE----LDSVNVYLCNPMTGVTRTLTPPPQANNK-----LSVGFGIDVV 190

Query: 2863 TDTYKVVIIFTSRGDEELISMAFTLGTNSWRKTVTSVAQISPPPGCSPFPSRRLVRRAAT 2684
            T TYKVV+ +   G     ++ F  GT+ WR T   +     P  C P P R  V     
Sbjct: 191  TGTYKVVLFYYGLG-----TVVFDFGTSKWRPTAGPM-----PLSCIPRPDRNPV----- 235

Query: 2683 LCGGDLFWKIADSAVEEEVIVTNFREQVHENNKFGMLLLLDIHKEKIQFVRLPTDFSLT 2507
               G LFW +                     N F  +L++D+H EK + +  P+D  +T
Sbjct: 236  FVNGSLFWLL--------------------KNNFSEILVMDLHTEKFRTLSTPSDMGVT 274


>emb|CDY40415.1| BnaA04g21020D [Brassica napus]
          Length = 386

 Score = 67.4 bits (163), Expect = 8e-08
 Identities = 51/179 (28%), Positives = 74/179 (41%)
 Frame = -3

Query: 3043 LVGYCNGFACITEKRKNVDGPNLTVINPVREETLSLPYYKYPTDKGECKYLCHGFGFDSS 2864
            + G CNG  C+ E    +D  N+ + NP+   T +L       +K     L  GFG D  
Sbjct: 140  VAGSCNGLVCVHE----LDSVNVYLCNPMTGVTRTLTPPPQANNK-----LSVGFGIDVV 190

Query: 2863 TDTYKVVIIFTSRGDEELISMAFTLGTNSWRKTVTSVAQISPPPGCSPFPSRRLVRRAAT 2684
            T TYKVV+ +   G     ++ F  GT+ WR T   +     P  C P P R  V     
Sbjct: 191  TGTYKVVLFYYGLG-----TVVFDFGTSKWRPTAGPM-----PLSCIPRPDRNPV----- 235

Query: 2683 LCGGDLFWKIADSAVEEEVIVTNFREQVHENNKFGMLLLLDIHKEKIQFVRLPTDFSLT 2507
               G LFW +                     N F  +L++D+H EK + +  P+D  +T
Sbjct: 236  FVNGSLFWLL--------------------KNNFSEILVMDLHTEKFRTLSTPSDMGVT 274


>ref|XP_012069912.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Jatropha
            curcas]
          Length = 363

 Score = 65.5 bits (158), Expect = 3e-07
 Identities = 52/180 (28%), Positives = 76/180 (42%), Gaps = 1/180 (0%)
 Frame = -3

Query: 3046 ELVGYCNGFACITEKRKNVDGPNLTVINPVREETLSLPYYKYPTDKGECKYLCHGFGFDS 2867
            E++G  +G  CIT  R         V NP       +P   YP +   C    HGFG+DS
Sbjct: 92   EIIGSSHGLICITTDRCE----RFYVWNPSTGSCRRIPNLGYPING--CTDYLHGFGYDS 145

Query: 2866 STDTYKVVIIFT-SRGDEELISMAFTLGTNSWRKTVTSVAQISPPPGCSPFPSRRLVRRA 2690
            S++ +KVV+  T S  +++ I   F+  TNSW+K V    Q    P CSP     L    
Sbjct: 146  SSNEFKVVVSLTRSTINQKTIYNVFSSKTNSWKKIVYPYRQEYYLPYCSP----NLYASL 201

Query: 2689 ATLCGGDLFWKIADSAVEEEVIVTNFREQVHENNKFGMLLLLDIHKEKIQFVRLPTDFSL 2510
             T   G L W +   +  +   + N             ++  D+  EK + V +P  F L
Sbjct: 202  GTYTNGALHWLVTKISPMDRTRLDN------------QIIAFDLANEKFRKVPIPVKFRL 249


>ref|XP_013460000.1| F-box protein interaction domain protein [Medicago truncatula]
            gi|657393189|gb|KEH34031.1| F-box protein interaction
            domain protein [Medicago truncatula]
          Length = 332

 Score = 61.6 bits (148), Expect = 4e-06
 Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
 Frame = -3

Query: 3094 HYIFRLLFNLEFKLKSELVGYCNGFACITEKR-KNVDGPNLTVINPVREETLSLPYYKYP 2918
            HY+F  L+++       +VG CNG  C+ +   + V+  ++ + NP   +   LP +K  
Sbjct: 131  HYLFDPLYSI-------IVGSCNGILCLDKNDFEMVEQSDVILWNPSVGKFKILPSFKI- 182

Query: 2917 TDKGECKYLCHGFGFDSSTDTYKVVIIFTSRGDEELI---SMAFTLGTNSWR 2771
              +GEC  + +GFG+D   D YK+V +F+     E+     M  TLGTNSWR
Sbjct: 183  --QGECGLVKYGFGYDHVKDVYKIVAVFSYYCCNEVFKTQGMVHTLGTNSWR 232


>ref|XP_011462060.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Fragaria vesca
            subsp. vesca]
          Length = 283

 Score = 61.2 bits (147), Expect = 6e-06
 Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
 Frame = -3

Query: 3043 LVGYCNGFACITEKRKNVDGPNLTVINPVREETLSLPYYKYPTDKGECKYLCHGFGFDSS 2864
            ++GYC+G  C+  K       ++ + NP   ++  LPY     +     + C GFG+D S
Sbjct: 108  IMGYCDGLVCV--KAYTSYNSHIFLWNPSTRDSKLLPYRPGVANNSARIFCCWGFGYDYS 165

Query: 2863 TDTYKVVIIFTSRGDEELI--SMAFTLGTNSWRKTVTSVAQISPPPGCSPFPSRRLVRRA 2690
            +D YKV+++F     E+    SM +TL TNSWR    S+        C     R     +
Sbjct: 166  SDDYKVLMVFPPEDHEDSSRKSMLYTLRTNSWR----SIQDFPLDTSC-----RVAGDWS 216

Query: 2689 ATLCGGDLFW 2660
            ATL  G L W
Sbjct: 217  ATLVNGALHW 226


>ref|NP_174618.1| F-box protein [Arabidopsis thaliana]
            gi|75268383|sp|Q9C800.1|FB34_ARATH RecName: Full=Putative
            F-box protein At1g33530
            gi|12322373|gb|AAG51205.1|AC051630_2 hypothetical
            protein; 83642-85072 [Arabidopsis thaliana]
            gi|332193482|gb|AEE31603.1| F-box protein [Arabidopsis
            thaliana]
          Length = 441

 Score = 61.2 bits (147), Expect = 6e-06
 Identities = 49/173 (28%), Positives = 75/173 (43%)
 Frame = -3

Query: 3037 GYCNGFACITEKRKNVDGPNLTVINPVREETLSLPYYKYPTDKGECKYLCHGFGFDSSTD 2858
            G CNG  C+ E    +D   + ++NP+   T +L      T     K L  GFG D  T 
Sbjct: 188  GSCNGLVCVYE----LDSVYIYLLNPMTGVTRTL------TPPRGTK-LSVGFGIDVVTG 236

Query: 2857 TYKVVIIFTSRGDEELISMAFTLGTNSWRKTVTSVAQISPPPGCSPFPSRRLVRRAATLC 2678
            TYKV++++   G + + ++ F L TN WR+   +   +  P  C P P R  V       
Sbjct: 237  TYKVMVLY---GFDRVGTVVFDLDTNKWRQRYKTAGPM--PLSCIPTPERNPV-----FV 286

Query: 2677 GGDLFWKIADSAVEEEVIVTNFREQVHENNKFGMLLLLDIHKEKIQFVRLPTD 2519
             G LFW +A                    + F  +L++D+H EK + +  P D
Sbjct: 287  NGSLFWLLA--------------------SDFSEILVMDLHTEKFRTLSQPND 319


Top