BLASTX nr result

ID: Papaver29_contig00040440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00040440
         (556 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599621.1| F-box protein interaction domain protein [Me...    61   3e-07
ref|XP_003599217.1| F-box protein interaction domain protein [Me...    61   4e-07
ref|XP_013459073.1| F-box protein interaction domain protein [Me...    58   3e-06
ref|XP_003598388.1| F-box and associated interaction domain prot...    57   4e-06
gb|AFK34264.1| unknown [Medicago truncatula]                           57   8e-06
ref|XP_003601620.1| F-box protein interaction domain protein [Me...    57   8e-06
ref|XP_004253306.1| PREDICTED: F-box/kelch-repeat protein At3g23...    56   1e-05

>ref|XP_003599621.1| F-box protein interaction domain protein [Medicago truncatula]
           gi|355488669|gb|AES69872.1| F-box protein interaction
           domain protein [Medicago truncatula]
          Length = 359

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 35/105 (33%), Positives = 54/105 (51%)
 Frame = -1

Query: 319 GFL*WFCLLLESTETILWNPHSDEYKELPKSPNKSEDRIRSPYAFGYDYSAGYYKVICLX 140
           GFL   C+   +   +LWNP  +++KELP    KS+      ++FGYD     YKVI + 
Sbjct: 123 GFL---CVAFSNYSIVLWNPSINKFKELPLI-QKSQGITNLTFSFGYDSLTDNYKVIVVL 178

Query: 139 XXXXXXXXXVYTIGPNLWKSTRIIPHRMYPVEEPGVLLSGVFHWL 5
                     +T+G + WK+ +  P  + PVE+ G  +SG  +WL
Sbjct: 179 QYTDVKV---HTLGTHFWKTIQEFPFGVMPVEKSGKFVSGRINWL 220


>ref|XP_003599217.1| F-box protein interaction domain protein [Medicago truncatula]
           gi|355488265|gb|AES69468.1| F-box protein interaction
           domain protein [Medicago truncatula]
          Length = 301

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
 Frame = -1

Query: 325 VCGFL*WFCLLLESTETILWNPHSDEYKELP--KSPNKSEDRIRSPYAFGYDYSAGYYKV 152
           VC      C  +E    +LWNP    +   P  K P K    + S ++FGY  S   YK+
Sbjct: 44  VCSCNGILCFTIEDHFPLLWNPSIRRFNTFPPLKYPGKGNTFLASTFSFGYSPSTHNYKI 103

Query: 151 ICLXXXXXXXXXXVYTIGPNLWKSTRIIPHRMYPVEEPGVLLSGVFHWL 5
           + +          VYT+G N W+  +  P+  +  + PGV +SG  +WL
Sbjct: 104 VAVSFFKNQYRVSVYTLGTNTWRRIQDFPY-SHISDNPGVFVSGTINWL 151


>ref|XP_013459073.1| F-box protein interaction domain protein [Medicago truncatula]
           gi|657392095|gb|KEH33126.1| F-box protein interaction
           domain protein [Medicago truncatula]
          Length = 450

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 33/108 (30%), Positives = 49/108 (45%)
 Frame = -1

Query: 328 SVCGFL*WFCLLLESTETILWNPHSDEYKELPKSPNKSEDRIRSPYAFGYDYSAGYYKVI 149
           +VC      CL +     +LWNP    +K LP   N+        Y+FGYD+    YK+I
Sbjct: 199 AVCSCAGILCLTMRQGSAVLWNPFIGMFKILPTLNNRVP--FYPLYSFGYDHFINNYKII 256

Query: 148 CLXXXXXXXXXXVYTIGPNLWKSTRIIPHRMYPVEEPGVLLSGVFHWL 5
            +          VYT+G + W+  +  PH +      GV +SG  +WL
Sbjct: 257 AISFFNEKYETRVYTLGTDSWRKIQDFPH-LSLYHPSGVFVSGAVNWL 303


>ref|XP_003598388.1| F-box and associated interaction domain protein [Medicago
           truncatula] gi|355487436|gb|AES68639.1| F-box and
           associated interaction domain protein [Medicago
           truncatula]
          Length = 389

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
 Frame = -1

Query: 274 ILWNPHSDEYKELPKSPNKSEDRIRSPYAFGYDYSAGYYKVICL-----------XXXXX 128
           ILWNP   ++KELP         +R  + FGYD     YKVI +                
Sbjct: 149 ILWNPSLRKFKELPLFEKPKVTHLRMSFGFGYDSFKENYKVIVVLHYLIRDSTGSDNWVH 208

Query: 127 XXXXXVYTIGPNLWKSTRIIPHRMYPVEEPGVLLSGVFHWL 5
                V+T+G N+WK+    P  ++PV   G  +SG  +WL
Sbjct: 209 KSEVKVHTLGSNIWKNIHEFPFGVFPVARSGKFVSGTINWL 249


>gb|AFK34264.1| unknown [Medicago truncatula]
          Length = 405

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
 Frame = -1

Query: 343 FRRRYSVCGFL*WFCLLLESTETILWNPHSDEYKELPKSPNKSEDRIRSP---YAFGYDY 173
           F   Y  C      CL  + +  +LWNP  +++K LP  P K     RSP   + FGYD 
Sbjct: 149 FASPYEWCSCDGIICLTTDYSSAVLWNPFINKFKTLP--PLKYISLKRSPSCLFTFGYDP 206

Query: 172 SAGYYKVICLXXXXXXXXXXVYTIGPNLWKSTRIIPHRMYPVEEPGVLLSGVFHWL 5
            A  YKV  +          V+T+G + W+     P   + + + G+ ++G  HWL
Sbjct: 207 FADNYKVFAITFCVKRTTVEVHTMGTSSWRRIEDFPSWSF-IPDSGIFVAGYVHWL 261


>ref|XP_003601620.1| F-box protein interaction domain protein [Medicago truncatula]
           gi|355490668|gb|AES71871.1| F-box protein interaction
           domain protein [Medicago truncatula]
          Length = 405

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
 Frame = -1

Query: 343 FRRRYSVCGFL*WFCLLLESTETILWNPHSDEYKELPKSPNKSEDRIRSP---YAFGYDY 173
           F   Y  C      CL  + +  +LWNP  +++K LP  P K     RSP   + FGYD 
Sbjct: 149 FASPYEWCSCDGIICLTTDYSSAVLWNPFINKFKTLP--PLKYISLKRSPSCLFTFGYDP 206

Query: 172 SAGYYKVICLXXXXXXXXXXVYTIGPNLWKSTRIIPHRMYPVEEPGVLLSGVFHWL 5
            A  YKV  +          V+T+G + W+     P   + + + G+ ++G  HWL
Sbjct: 207 FADNYKVFAITFCVKRTTVEVHTMGTSSWRRIEDFPSWSF-IPDSGIFVAGYVHWL 261


>ref|XP_004253306.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           lycopersicum]
          Length = 394

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 13/103 (12%)
 Frame = -1

Query: 274 ILWNPHSDEYKELP--KSPNKSEDRIRSPYAFGYDYSAGYYKVICLXXXXXXXXXXV--- 110
           ILWNP   ++KELP  + P  S D +R  + FG D     YKVI +              
Sbjct: 149 ILWNPSLRKFKELPVFEKPKVSTDHLRKTFGFGSDSLTDNYKVIVVLDYFIHDRTDSDNL 208

Query: 109 --------YTIGPNLWKSTRIIPHRMYPVEEPGVLLSGVFHWL 5
                   +T+G N+W++ +  P  ++P    G  +SG  +WL
Sbjct: 209 VRKSEVKVHTLGSNIWRNIQEFPFGVFPFGRSGKFVSGTINWL 251


Top