BLASTX nr result

ID: Papaver29_contig00040416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00040416
         (447 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010455259.1| PREDICTED: putative transcription elongation...    57   5e-06
ref|XP_010424426.1| PREDICTED: putative transcription elongation...    57   5e-06
ref|XP_010436493.1| PREDICTED: putative transcription elongation...    57   5e-06
ref|XP_006397306.1| hypothetical protein EUTSA_v10028382mg [Eutr...    57   5e-06
ref|XP_004292548.1| PREDICTED: putative transcription elongation...    57   5e-06
ref|XP_002305464.2| hypothetical protein POPTR_0004s16940g [Popu...    56   9e-06

>ref|XP_010455259.1| PREDICTED: putative transcription elongation factor SPT5 homolog 1
           [Camelina sativa]
          Length = 1040

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = +2

Query: 332 RDSWEDGNPGSWGSSLQYQPGTPPAQILRKHQP*GIW 442
           RDSWEDGNPGSWG+S QYQPG+PP++      P   W
Sbjct: 824 RDSWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGW 860


>ref|XP_010424426.1| PREDICTED: putative transcription elongation factor SPT5 homolog 1
           [Camelina sativa]
          Length = 869

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = +2

Query: 332 RDSWEDGNPGSWGSSLQYQPGTPPAQILRKHQP*GIW 442
           RDSWEDGNPGSWG+S QYQPG+PP++      P   W
Sbjct: 653 RDSWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGW 689


>ref|XP_010436493.1| PREDICTED: putative transcription elongation factor SPT5 homolog 1
           [Camelina sativa]
          Length = 1037

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = +2

Query: 332 RDSWEDGNPGSWGSSLQYQPGTPPAQILRKHQP*GIW 442
           RDSWEDGNPGSWG+S QYQPG+PP++      P   W
Sbjct: 821 RDSWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGW 857


>ref|XP_006397306.1| hypothetical protein EUTSA_v10028382mg [Eutrema salsugineum]
           gi|557098323|gb|ESQ38759.1| hypothetical protein
           EUTSA_v10028382mg [Eutrema salsugineum]
          Length = 1034

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = +2

Query: 332 RDSWEDGNPGSWGSSLQYQPGTPPAQILRKHQP*GIW 442
           RDSWEDGNPGSWG+S QYQPG+PP++      P   W
Sbjct: 818 RDSWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGW 854


>ref|XP_004292548.1| PREDICTED: putative transcription elongation factor SPT5 homolog 1
           [Fragaria vesca subsp. vesca]
          Length = 1041

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = +2

Query: 332 RDSWEDGNPGSWGSSLQYQPGTPPAQILRKHQP*GIW 442
           RDSWEDGNPGSWG+S QYQPG+PP++      P   W
Sbjct: 824 RDSWEDGNPGSWGTSPQYQPGSPPSRTYEAPTPGSGW 860


>ref|XP_002305464.2| hypothetical protein POPTR_0004s16940g [Populus trichocarpa]
           gi|550341200|gb|EEE85975.2| hypothetical protein
           POPTR_0004s16940g [Populus trichocarpa]
          Length = 1051

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 23/38 (60%), Positives = 27/38 (71%)
 Frame = +2

Query: 329 LRDSWEDGNPGSWGSSLQYQPGTPPAQILRKHQP*GIW 442
           LRD+WEDGNPGSWG+S QYQPG+PP+       P   W
Sbjct: 830 LRDNWEDGNPGSWGTSPQYQPGSPPSGTYEAPTPGSGW 867


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