BLASTX nr result
ID: Papaver29_contig00040315
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00040315
(2081 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322117.2| pentatricopeptide repeat-containing family p... 71 3e-21
ref|XP_010263326.1| PREDICTED: putative pentatricopeptide repeat... 80 2e-19
ref|XP_010263334.1| PREDICTED: putative pentatricopeptide repeat... 80 2e-19
ref|XP_010665345.1| PREDICTED: putative pentatricopeptide repeat... 77 2e-18
ref|XP_010665355.1| PREDICTED: putative pentatricopeptide repeat... 77 2e-18
ref|XP_007021394.1| Tetratricopeptide repeat-like superfamily pr... 72 2e-16
ref|XP_006471578.1| PREDICTED: putative pentatricopeptide repeat... 72 9e-16
ref|XP_006432800.1| hypothetical protein CICLE_v10003653mg [Citr... 72 9e-16
ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing prote... 68 5e-15
ref|XP_008387052.1| PREDICTED: putative pentatricopeptide repeat... 70 5e-15
gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidop... 68 5e-15
ref|XP_010478604.1| PREDICTED: putative pentatricopeptide repeat... 67 7e-15
ref|XP_010906700.1| PREDICTED: putative pentatricopeptide repeat... 68 7e-15
ref|XP_006306763.1| hypothetical protein CARUB_v10008303mg [Caps... 67 2e-14
ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp.... 69 2e-14
ref|XP_009372554.1| PREDICTED: putative pentatricopeptide repeat... 74 3e-14
ref|XP_006418059.1| hypothetical protein EUTSA_v10009444mg [Eutr... 66 3e-14
ref|XP_009620715.1| PREDICTED: putative pentatricopeptide repeat... 64 3e-14
ref|XP_008785017.1| PREDICTED: putative pentatricopeptide repeat... 67 3e-14
ref|XP_010499732.1| PREDICTED: putative pentatricopeptide repeat... 62 4e-14
>ref|XP_002322117.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550321948|gb|EEF06244.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 854
Score = 71.2 bits (173), Expect(2) = 3e-21
Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -2
Query: 1066 RVYK--IVEGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF 893
++YK + EGISP+ V ILIKG CQ G+++EACG+F +ILK GFE S LTYS L+ F
Sbjct: 398 QIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGF 457
Query: 892 ---RNIRDGFH 869
N+RDGF+
Sbjct: 458 CKSGNLRDGFY 468
Score = 60.8 bits (146), Expect(2) = 3e-21
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 8/178 (4%)
Frame = -1
Query: 869 LYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDA-RWFLKQWR-------VVLSRMLLFWC 714
LYE M+KK C + YS L+ G C++G DA R+F + L+ +L +C
Sbjct: 469 LYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFC 528
Query: 713 EMKRIRDVLKVFKQSER*YRP*CSHLHLFSHGGHITW*VG*SFDYFSFK*EML*RFALSL 534
+K I +KV+ +
Sbjct: 529 RLKCIVGAMKVY---------------------------------------------YLM 543
Query: 533 NSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLIDRTSNLK 360
++ +T+T+ ILI +++ R+D+A++ F +++KDF P+ ITY TLID LK
Sbjct: 544 GMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLK 601
>ref|XP_010263326.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840 isoform X1 [Nelumbo nucifera]
gi|720023426|ref|XP_010263327.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g31840
isoform X1 [Nelumbo nucifera]
gi|720023432|ref|XP_010263330.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g31840
isoform X1 [Nelumbo nucifera]
gi|720023436|ref|XP_010263331.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g31840
isoform X1 [Nelumbo nucifera]
gi|720023439|ref|XP_010263332.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g31840
isoform X1 [Nelumbo nucifera]
gi|720023442|ref|XP_010263333.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g31840
isoform X1 [Nelumbo nucifera]
Length = 840
Score = 80.1 bits (196), Expect(3) = 2e-19
Identities = 60/178 (33%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Frame = -2
Query: 1048 EGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF---RNIRD 878
E I+P+ V Y ILI GLCQKG ++ A G+F +I+K+GFE S LTYS+L+D F N+RD
Sbjct: 392 ESITPNLVTYSILINGLCQKGHILAASGIFCQIVKHGFEPSILTYSSLIDGFCNYGNLRD 451
Query: 877 GFHYMSSW*RKVVF*KSSPILHLYRVFAKKGERLMLAGFLSNXXXXXXXXXXXGVK*KES 698
GFH S + L + KKG + F
Sbjct: 452 GFHVFESMVEEGCVPDVVVYSILIKGLIKKGRMVDALRFFFRAVERGLEPSLVTFNILMD 511
Query: 697 GMY*RCSNK------------VRDNIDPDVVTCTFFLMGVT*RGK*DEALIIFLSSEK 560
G C K RD + PD+VT T + T +G+ +EALI+F K
Sbjct: 512 GC---CRTKRLADALKIYTQMGRDKVAPDLVTYTMLIKDFTDQGRLNEALILFFQIVK 566
Score = 39.7 bits (91), Expect(3) = 2e-19
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Frame = -1
Query: 1262 EALELYNIMIEKGRTLDVVLCGTI---KCEVGKMKEGHDLLRVFAVGL*FDLDVYDF 1101
EALELYN++IEK + D+++ + ++G+++EGHDLL V A+G DV F
Sbjct: 311 EALELYNLIIEKDMSPDLIVYSILIDGFSKIGRIEEGHDLLSV-ALGAGVKPDVVVF 366
Score = 26.2 bits (56), Expect(3) = 2e-19
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 1101 YVKIGDF*GAIEEYTRLLKESL 1036
Y++IG+ A E Y R+LKES+
Sbjct: 373 YIRIGNLERATEVYIRMLKESI 394
Score = 68.9 bits (167), Expect = 2e-08
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Frame = -1
Query: 536 LNSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID---RTSN 366
L KG+ PNT+T+ ILI+ K+ R+D+A+L F ++EK TPN +TY+ L+D + N
Sbjct: 669 LTHKGIHPNTVTFTILIDAFCKEGRMDEAMLVFSAMLEKGLTPNVVTYSCLMDGYFKFQN 728
Query: 365 LKIC-EVCTSDMKKCFKTKFLQYC*L*CSR*WSL*RRKNL*SIKGFSVRDKL-------- 213
++ E+ ++ + Y L I GF R +L
Sbjct: 729 VQTALELHEEMLENKISPNIVSYSVL----------------IDGFCKRGQLDEASLTFH 772
Query: 212 CS-----LPDVEAYGILN*GFCKV----------DMLTDDGVVPD 123
C+ LPDV AYGI+ G+CKV D + +GV+PD
Sbjct: 773 CALDRGLLPDVVAYGIMISGYCKVGRLVEAMMLYDQMVANGVMPD 817
>ref|XP_010263334.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840 isoform X2 [Nelumbo nucifera]
Length = 805
Score = 80.1 bits (196), Expect(3) = 2e-19
Identities = 60/178 (33%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Frame = -2
Query: 1048 EGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF---RNIRD 878
E I+P+ V Y ILI GLCQKG ++ A G+F +I+K+GFE S LTYS+L+D F N+RD
Sbjct: 357 ESITPNLVTYSILINGLCQKGHILAASGIFCQIVKHGFEPSILTYSSLIDGFCNYGNLRD 416
Query: 877 GFHYMSSW*RKVVF*KSSPILHLYRVFAKKGERLMLAGFLSNXXXXXXXXXXXGVK*KES 698
GFH S + L + KKG + F
Sbjct: 417 GFHVFESMVEEGCVPDVVVYSILIKGLIKKGRMVDALRFFFRAVERGLEPSLVTFNILMD 476
Query: 697 GMY*RCSNK------------VRDNIDPDVVTCTFFLMGVT*RGK*DEALIIFLSSEK 560
G C K RD + PD+VT T + T +G+ +EALI+F K
Sbjct: 477 GC---CRTKRLADALKIYTQMGRDKVAPDLVTYTMLIKDFTDQGRLNEALILFFQIVK 531
Score = 39.7 bits (91), Expect(3) = 2e-19
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Frame = -1
Query: 1262 EALELYNIMIEKGRTLDVVLCGTI---KCEVGKMKEGHDLLRVFAVGL*FDLDVYDF 1101
EALELYN++IEK + D+++ + ++G+++EGHDLL V A+G DV F
Sbjct: 276 EALELYNLIIEKDMSPDLIVYSILIDGFSKIGRIEEGHDLLSV-ALGAGVKPDVVVF 331
Score = 26.2 bits (56), Expect(3) = 2e-19
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 1101 YVKIGDF*GAIEEYTRLLKESL 1036
Y++IG+ A E Y R+LKES+
Sbjct: 338 YIRIGNLERATEVYIRMLKESI 359
Score = 68.9 bits (167), Expect = 2e-08
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Frame = -1
Query: 536 LNSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID---RTSN 366
L KG+ PNT+T+ ILI+ K+ R+D+A+L F ++EK TPN +TY+ L+D + N
Sbjct: 634 LTHKGIHPNTVTFTILIDAFCKEGRMDEAMLVFSAMLEKGLTPNVVTYSCLMDGYFKFQN 693
Query: 365 LKIC-EVCTSDMKKCFKTKFLQYC*L*CSR*WSL*RRKNL*SIKGFSVRDKL-------- 213
++ E+ ++ + Y L I GF R +L
Sbjct: 694 VQTALELHEEMLENKISPNIVSYSVL----------------IDGFCKRGQLDEASLTFH 737
Query: 212 CS-----LPDVEAYGILN*GFCKV----------DMLTDDGVVPD 123
C+ LPDV AYGI+ G+CKV D + +GV+PD
Sbjct: 738 CALDRGLLPDVVAYGIMISGYCKVGRLVEAMMLYDQMVANGVMPD 782
>ref|XP_010665345.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840 isoform X1 [Vitis vinifera]
gi|296088470|emb|CBI37461.3| unnamed protein product
[Vitis vinifera]
Length = 822
Score = 77.0 bits (188), Expect(3) = 2e-18
Identities = 65/179 (36%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Frame = -2
Query: 1048 EGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF---RNIRD 878
EGISP+ V Y ILI GLC+ G+++EACGVF +ILK G E S LTYS+L+D F N+RD
Sbjct: 374 EGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRD 433
Query: 877 GFHYMSSW*RK-----VV--------F*KSSPILHLYRVFAKKGER-LMLAGFLSNXXXX 740
GF RK VV + + R F + +R L L +L N
Sbjct: 434 GFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALID 493
Query: 739 XXXXXXXGVK*KE----SGMY*RCSNKVRDNIDPDVVTCTFFLMGVT*RGK*DEALIIF 575
+ GMY + PDVVT T + G+ +G+ DEAL +F
Sbjct: 494 GCFRLKRTRDGLKMYILMGMY---------KVIPDVVTYTVLVKGLAEQGRLDEALALF 543
Score = 34.3 bits (77), Expect(3) = 2e-18
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Frame = -1
Query: 1301 FRTLIQLL-KVMRC-EALELYNIMIEKGRTLDVVLCGTI---KCEVGKMKEGHDLLRV-F 1140
F TLI + K +R EA LYN+MIEKG D+V+ + GK++EG+ L +
Sbjct: 278 FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMAL 337
Query: 1139 AVGL*FDLDVYDFML 1095
A G+ D+ ++ ++
Sbjct: 338 ARGVKMDVVIFSSIM 352
Score = 30.8 bits (68), Expect(3) = 2e-18
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -3
Query: 1101 YVKIGDF*GAIEEYTRLLKESL 1036
YV++GD AIE YTR+LKE +
Sbjct: 355 YVRVGDLGKAIEVYTRMLKEGI 376
Score = 60.8 bits (146), Expect = 5e-06
Identities = 79/304 (25%), Positives = 129/304 (42%), Gaps = 50/304 (16%)
Frame = -1
Query: 869 LYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDARWFLKQW--------RVVLSRMLLFWC 714
+Y M + VVTY+ LV+G E+GR +A Q ++ ++ +C
Sbjct: 507 MYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC 566
Query: 713 EMKRIRDVLKVFK--QSER*YRP*CSH---LHLFSHGGHITW*V---------G*SFDYF 576
+ + L++FK QS + C + +++F G + + G D
Sbjct: 567 KKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIV 626
Query: 575 SFK*EML*RFALSLNSKGL-----------EPNTITWIILINVSSKDARIDKAILAFDLV 429
++ + +L + SK + +PN IT+ ILI+ KD R+D A+L F +
Sbjct: 627 TYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSM 686
Query: 428 VEKDFTPNCITYNTLID---RTSNLKIC-EVCTSDMKKCFKTKFLQYC*L---*CSR*WS 270
+E+ PN +TY+ LID +T N + E+ + + Y L C +
Sbjct: 687 LERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKK--G 744
Query: 269 L*RRKNL*SIKGFSVRDKLCSLPDVEAYGILN*GFCKVDMLTD----------DGVVPDV 120
L +L F LPDV AYGIL G+CKV L + +G++PD
Sbjct: 745 LMEEASL----AFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDD 800
Query: 119 LLPK 108
LL K
Sbjct: 801 LLQK 804
>ref|XP_010665355.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840 isoform X2 [Vitis vinifera]
Length = 668
Score = 77.0 bits (188), Expect(3) = 2e-18
Identities = 65/179 (36%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Frame = -2
Query: 1048 EGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF---RNIRD 878
EGISP+ V Y ILI GLC+ G+++EACGVF +ILK G E S LTYS+L+D F N+RD
Sbjct: 220 EGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRD 279
Query: 877 GFHYMSSW*RK-----VV--------F*KSSPILHLYRVFAKKGER-LMLAGFLSNXXXX 740
GF RK VV + + R F + +R L L +L N
Sbjct: 280 GFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALID 339
Query: 739 XXXXXXXGVK*KE----SGMY*RCSNKVRDNIDPDVVTCTFFLMGVT*RGK*DEALIIF 575
+ GMY + PDVVT T + G+ +G+ DEAL +F
Sbjct: 340 GCFRLKRTRDGLKMYILMGMY---------KVIPDVVTYTVLVKGLAEQGRLDEALALF 389
Score = 34.3 bits (77), Expect(3) = 2e-18
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Frame = -1
Query: 1301 FRTLIQLL-KVMRC-EALELYNIMIEKGRTLDVVLCGTI---KCEVGKMKEGHDLLRV-F 1140
F TLI + K +R EA LYN+MIEKG D+V+ + GK++EG+ L +
Sbjct: 124 FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMAL 183
Query: 1139 AVGL*FDLDVYDFML 1095
A G+ D+ ++ ++
Sbjct: 184 ARGVKMDVVIFSSIM 198
Score = 30.8 bits (68), Expect(3) = 2e-18
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -3
Query: 1101 YVKIGDF*GAIEEYTRLLKESL 1036
YV++GD AIE YTR+LKE +
Sbjct: 201 YVRVGDLGKAIEVYTRMLKEGI 222
Score = 60.8 bits (146), Expect = 5e-06
Identities = 79/304 (25%), Positives = 129/304 (42%), Gaps = 50/304 (16%)
Frame = -1
Query: 869 LYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDARWFLKQW--------RVVLSRMLLFWC 714
+Y M + VVTY+ LV+G E+GR +A Q ++ ++ +C
Sbjct: 353 MYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC 412
Query: 713 EMKRIRDVLKVFK--QSER*YRP*CSH---LHLFSHGGHITW*V---------G*SFDYF 576
+ + L++FK QS + C + +++F G + + G D
Sbjct: 413 KKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIV 472
Query: 575 SFK*EML*RFALSLNSKGL-----------EPNTITWIILINVSSKDARIDKAILAFDLV 429
++ + +L + SK + +PN IT+ ILI+ KD R+D A+L F +
Sbjct: 473 TYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSM 532
Query: 428 VEKDFTPNCITYNTLID---RTSNLKIC-EVCTSDMKKCFKTKFLQYC*L---*CSR*WS 270
+E+ PN +TY+ LID +T N + E+ + + Y L C +
Sbjct: 533 LERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKK--G 590
Query: 269 L*RRKNL*SIKGFSVRDKLCSLPDVEAYGILN*GFCKVDMLTD----------DGVVPDV 120
L +L F LPDV AYGIL G+CKV L + +G++PD
Sbjct: 591 LMEEASL----AFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDD 646
Query: 119 LLPK 108
LL K
Sbjct: 647 LLQK 650
>ref|XP_007021394.1| Tetratricopeptide repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|590608907|ref|XP_007021395.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508721022|gb|EOY12919.1| Tetratricopeptide repeat-like
superfamily protein, putative isoform 1 [Theobroma cacao]
gi|508721023|gb|EOY12920.1| Tetratricopeptide repeat-like
superfamily protein, putative isoform 1 [Theobroma cacao]
Length = 808
Score = 72.0 bits (175), Expect(2) = 2e-16
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 5/71 (7%)
Frame = -2
Query: 1066 RVYK--IVEGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF 893
+VYK + EG+SP+ V Y ILI GL G+++EACGVF +I+K GFE S +TYS+L+D F
Sbjct: 363 QVYKRMLEEGLSPNVVSYSILINGLYGNGRMLEACGVFGQIIKRGFEPSIVTYSSLIDGF 422
Query: 892 ---RNIRDGFH 869
N+RDGF+
Sbjct: 423 CKLGNLRDGFY 433
Score = 43.5 bits (101), Expect(2) = 2e-16
Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 8/171 (4%)
Frame = -1
Query: 869 LYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDARWF--------LKQWRVVLSRMLLFWC 714
L++ MVK VV YSAL+ G C+EG T A LK + ++ +C
Sbjct: 434 LFDDMVKNGHQPDVVVYSALINGLCKEGMMTSALMLFFNCVSRGLKPNIFTFNSLMDGYC 493
Query: 713 EMKRIRDVLKVFKQSER*YRP*CSHLHLFSHGGHITW*VG*SFDYFSFK*EML*RFALSL 534
+K++R+ +KV + +
Sbjct: 494 RLKQLRNAVKV---------------------------------------------STVM 508
Query: 533 NSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLI 381
++ + +T +LI SK ++D A+L F ++++ F + ITY T+I
Sbjct: 509 GMYNIKQDMVTHTVLIREISKQGKLDVALLIFFQMLKRGFPGDAITYCTII 559
>ref|XP_006471578.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like isoform X1 [Citrus sinensis]
gi|568835013|ref|XP_006471579.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g31840-like isoform X2 [Citrus sinensis]
gi|568835015|ref|XP_006471580.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g31840-like isoform X3 [Citrus sinensis]
gi|568835017|ref|XP_006471581.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g31840-like isoform X4 [Citrus sinensis]
gi|568835019|ref|XP_006471582.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g31840-like isoform X5 [Citrus sinensis]
gi|568835021|ref|XP_006471583.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g31840-like isoform X6 [Citrus sinensis]
gi|568835023|ref|XP_006471584.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g31840-like isoform X7 [Citrus sinensis]
Length = 809
Score = 72.0 bits (175), Expect(2) = 9e-16
Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Frame = -2
Query: 1048 EGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF---RNIRD 878
EGI P+ V Y ILIKGLCQ+G+L+EACG+F ++L G E S LTYS+L+D F +RD
Sbjct: 362 EGILPNVVSYSILIKGLCQQGRLVEACGIFGQVLIRGLEPSLLTYSSLIDGFCKSGKLRD 421
Query: 877 GF 872
GF
Sbjct: 422 GF 423
Score = 41.6 bits (96), Expect(2) = 9e-16
Identities = 36/171 (21%), Positives = 65/171 (38%), Gaps = 8/171 (4%)
Frame = -1
Query: 869 LYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDA-RWFLKQWRVVLSRMLLF-------WC 714
LY+ M+K+ V L+ G C++G DA R+F + R+ L L +C
Sbjct: 425 LYDNMIKRGLKPDAVVCGLLINGLCKQGLMGDALRFFFQSVRMALIPNLFIFNTLMDGFC 484
Query: 713 EMKRIRDVLKVFKQSER*YRP*CSHLHLFSHGGHITW*VG*SFDYFSFK*EML*RFALSL 534
+KR D +K+F + +
Sbjct: 485 RLKRATDTVKLF---------------------------------------------MLM 499
Query: 533 NSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLI 381
++P+ IT +LI + + A+L F ++++ TP+ ITY+ +I
Sbjct: 500 GMYNIKPDVITHTVLIRGIAGQGSLSSAMLLFFQMLKRGLTPDVITYSAII 550
Score = 52.8 bits (125), Expect(2) = 1e-06
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Frame = -1
Query: 521 LEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID---RTSNLKIC- 354
L+PN+IT+ ILI+ K+ R+D A + F ++EK N +TY+ LID ++ N+K
Sbjct: 644 LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 703
Query: 353 ----EVCTSDMKKCFKTKFLQYC*L*CSR*WSL*RRKNL*SIKGFSVRDKLCSLPDVEAY 186
E+C +++ + + L C R L ++ F LPDV Y
Sbjct: 704 DVYEEMCENNISPNIVSYSILIDGL-CKR--GLMEE----ALYAFHCALDNHLLPDVVTY 756
Query: 185 GILN*GFCKV----------DMLTDDGVVPDVLLPKTKKHNVSQMTKYH*NMQSN-SGKH 39
IL G+CK D + +G++PD LL +S + Y N+QS+ S +H
Sbjct: 757 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL-------LSTLADY--NLQSSGSQEH 807
Query: 38 C 36
C
Sbjct: 808 C 808
Score = 29.6 bits (65), Expect(2) = 1e-06
Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 10/166 (6%)
Frame = -2
Query: 1042 ISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF---RNIRDGF 872
I P + + +LI+G+ +G L A +F ++LK G +TYS ++ +N+ G
Sbjct: 504 IKPDVITHTVLIRGIAGQGSLSSAMLLFFQMLKRGLTPDVITYSAIIHGLFKRKNVHAGL 563
Query: 871 HYMSSW*RKVVF*KSSPILHLYRVFAKK-------GERLMLAGFLSNXXXXXXXXXXXGV 713
R V P + +Y V L L G L++
Sbjct: 564 QMFKLMERNGVV----PDIAIYNVLLNMLIKECHLDAALKLFGQLTDR------------ 607
Query: 712 K*KESGMY*RCSNKVRDNIDPDVVTCTFFLMGVT*RGK*DEALIIF 575
++PD++T + G + DEA+ +F
Sbjct: 608 -----------------GLEPDIITYNTIICGYCSLNRLDEAVQLF 636
>ref|XP_006432800.1| hypothetical protein CICLE_v10003653mg [Citrus clementina]
gi|557534922|gb|ESR46040.1| hypothetical protein
CICLE_v10003653mg [Citrus clementina]
Length = 809
Score = 72.0 bits (175), Expect(2) = 9e-16
Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Frame = -2
Query: 1048 EGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF---RNIRD 878
EGI P+ V Y ILIKGLCQ+G+L+EACG+F ++L G E S LTYS+L+D F +RD
Sbjct: 362 EGILPNVVSYSILIKGLCQQGRLVEACGIFGQVLIRGLEPSLLTYSSLIDGFCKSGKLRD 421
Query: 877 GF 872
GF
Sbjct: 422 GF 423
Score = 41.6 bits (96), Expect(2) = 9e-16
Identities = 36/171 (21%), Positives = 65/171 (38%), Gaps = 8/171 (4%)
Frame = -1
Query: 869 LYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDA-RWFLKQWRVVLSRMLLF-------WC 714
LY+ M+K+ V L+ G C++G DA R+F + R+ L L +C
Sbjct: 425 LYDNMIKRGLKPDAVVCGLLINGLCKQGLMGDALRFFFQSVRMALIPNLFIFNTLMDGFC 484
Query: 713 EMKRIRDVLKVFKQSER*YRP*CSHLHLFSHGGHITW*VG*SFDYFSFK*EML*RFALSL 534
+KR D +K+F + +
Sbjct: 485 RLKRATDTVKLF---------------------------------------------MLM 499
Query: 533 NSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLI 381
++P+ IT +LI + + A+L F ++++ TP+ ITY+ +I
Sbjct: 500 GMYNIKPDVITHTVLIRGIAGQGSLSSAMLLFFQMLKRGLTPDVITYSAII 550
Score = 52.8 bits (125), Expect(2) = 1e-06
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Frame = -1
Query: 521 LEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID---RTSNLKIC- 354
L+PN+IT+ ILI+ K+ R+D A + F ++EK N +TY+ LID ++ N+K
Sbjct: 644 LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 703
Query: 353 ----EVCTSDMKKCFKTKFLQYC*L*CSR*WSL*RRKNL*SIKGFSVRDKLCSLPDVEAY 186
E+C +++ + + L C R L ++ F LPDV Y
Sbjct: 704 DVYEEMCENNISPNIVSYSILIDGL-CKR--GLMEE----ALYAFHCALDNHLLPDVVTY 756
Query: 185 GILN*GFCKV----------DMLTDDGVVPDVLLPKTKKHNVSQMTKYH*NMQSN-SGKH 39
IL G+CK D + +G++PD LL +S + Y N+QS+ S +H
Sbjct: 757 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL-------LSTLADY--NLQSSGSQEH 807
Query: 38 C 36
C
Sbjct: 808 C 808
Score = 29.6 bits (65), Expect(2) = 1e-06
Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 10/166 (6%)
Frame = -2
Query: 1042 ISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF---RNIRDGF 872
I P + + +LI+G+ +G L A +F ++LK G +TYS ++ +N+ G
Sbjct: 504 IKPDVITHTVLIRGIAGQGSLSSAMLLFFQMLKRGLTPDVITYSAIIHGLFKRKNVHAGL 563
Query: 871 HYMSSW*RKVVF*KSSPILHLYRVFAKK-------GERLMLAGFLSNXXXXXXXXXXXGV 713
R V P + +Y V L L G L++
Sbjct: 564 QMFKLMERNGVV----PDIAIYNVLLNMLIKECHLDAALKLFGQLTDR------------ 607
Query: 712 K*KESGMY*RCSNKVRDNIDPDVVTCTFFLMGVT*RGK*DEALIIF 575
++PD++T + G + DEA+ +F
Sbjct: 608 -----------------GLEPDIITYNTIICGYCSLNRLDEAVQLF 636
>ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing protein
At1g31840 gi|332193282|gb|AEE31403.1| pentatricopeptide
(PPR) repeat-containing protein [Arabidopsis thaliana]
Length = 840
Score = 68.2 bits (165), Expect(2) = 5e-15
Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
Frame = -2
Query: 1063 VYK--IVEGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF- 893
VYK + +GISP+ V Y ILIKGLCQ G++ EA G++ +ILK G E S +TYS+L+D F
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 892 --RNIRDGF 872
N+R GF
Sbjct: 438 KCGNLRSGF 446
Score = 42.7 bits (99), Expect(2) = 5e-15
Identities = 37/172 (21%), Positives = 64/172 (37%), Gaps = 8/172 (4%)
Frame = -1
Query: 869 LYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDARWF--------LKQWRVVLSRMLLFWC 714
LYE M+K VV Y LV G ++G A F ++ VV + ++ WC
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 713 EMKRIRDVLKVFKQSER*YRP*CSHLHLFSHGGHITW*VG*SFDYFSFK*EML*RFALSL 534
+ R + LKVF+ +
Sbjct: 508 RLNRFDEALKVFR---------------------------------------------LM 522
Query: 533 NSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID 378
G++P+ T+ ++ VS + R+++A+ F + + P+ + Y TLID
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
>ref|XP_008387052.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840 [Malus domestica]
Length = 865
Score = 69.7 bits (169), Expect(3) = 5e-15
Identities = 60/182 (32%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Frame = -2
Query: 1048 EGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVD---TFRNIRD 878
EGISP+SV Y ILI G+C G + EACG+F +ILK GF S LTYS+L++ N++D
Sbjct: 389 EGISPNSVSYTILINGMCXDGXVXEACGIFGQILKCGFVPSILTYSSLIEGMCKIGNLKD 448
Query: 877 GFHYMSSW*RKVVF*KSSPILHLYRVFAKKGERLMLAGFLSNXXXXXXXXXXXGVK*KE- 701
F +++ P + LY V L G + + GVK
Sbjct: 449 AFQLY----ERMIKTGYEPDIILYGVLL---NGLCKNGLMGDALRFFFQAVHRGVKPNVY 501
Query: 700 --SGMY*RCS--NKVRD-----------NIDPDVVTCTFFLMGVT*RGK*DEALIIFLSS 566
+ + C ++RD NI PDVVT T + G++ G+ ++AL+ F S
Sbjct: 502 TFNMLIDGCCRLKRLRDAVKVYIQMGIYNIKPDVVTNTVLIKGISEVGRLNDALVFFFQS 561
Query: 565 EK 560
K
Sbjct: 562 VK 563
Score = 35.0 bits (79), Expect(3) = 5e-15
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 536 LNSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLI 381
+ G+ P+ + +LIN+ K+ ID A F+ E P+ ITYNT+I
Sbjct: 596 MRRNGVNPDIAIYNVLINMLFKENCIDAAQEVFERFAESGPEPDIITYNTMI 647
Score = 25.8 bits (55), Expect(3) = 5e-15
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 1101 YVKIGDF*GAIEEYTRLLKESL 1036
YV+IGD ++E Y R+LKE +
Sbjct: 370 YVRIGDPVKSVEVYRRMLKEGI 391
Score = 47.4 bits (111), Expect(3) = 9e-10
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = -2
Query: 1066 RVYKIV--EGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF 893
++YKI+ +GISP V+Y IL+ GL + G+ C +FS L G +L + +S+++D +
Sbjct: 311 KLYKIMIEKGISPDLVVYSILVDGLFKAGKFEXGCWLFSAALDGGIKLDVVIFSSVMDAY 370
Query: 892 RNIRD 878
I D
Sbjct: 371 VRIGD 375
Score = 35.8 bits (81), Expect(3) = 9e-10
Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 33/199 (16%)
Frame = -1
Query: 875 VPLYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDARWFLKQWR--------VVLSRMLLF 720
V +Y M+K+ V+Y+ L+ G C +G +A Q + S ++
Sbjct: 380 VEVYRRMLKEGISPNSVSYTILINGMCXDGXVXEACGIFGQILKCGFVPSILTYSSLIEG 439
Query: 719 WCEMKRIRDVLKVFKQS-ER*YRP*CSHLHLFSHGGHITW*VG*SFDYF----------- 576
C++ ++D +++++ + Y P + +G +G + +F
Sbjct: 440 MCKIGNLKDAFQLYERMIKTGYEPDIILYGVLLNGLCKNGLMGDALRFFFQAVHRGVKPN 499
Query: 575 SFK*EML-------------*RFALSLNSKGLEPNTITWIILINVSSKDARIDKAILAFD 435
+ ML + + + ++P+ +T +LI S+ R++ A++ F
Sbjct: 500 VYTFNMLIDGCCRLKRLRDAVKVYIQMGIYNIKPDVVTNTVLIKGISEVGRLNDALVFFF 559
Query: 434 LVVEKDFTPNCITYNTLID 378
V+K F P+ +TY TLID
Sbjct: 560 QSVKKGFLPDVVTYCTLID 578
Score = 29.3 bits (64), Expect(3) = 9e-10
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = -1
Query: 1292 LIQLLKVMRCEA-LELYNIMIEKGRTLDVVLCGTI---KCEVGKMKEGHDLLRV 1143
++ LL R E LE ++ +I++G +LD+V C I C+ ++ +G D V
Sbjct: 227 MVGLLNKGRFETGLEFHSALIDRGFSLDIVACNKILKRLCKENQVGDGEDFFTV 280
Score = 64.3 bits (155), Expect = 4e-07
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 17/154 (11%)
Frame = -1
Query: 518 EPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID---RTSNLKICEV 348
+PN IT ILI+ K+ ++D A+L FD ++EKD PN +TY+ LID ++ N K
Sbjct: 672 KPNAITCTILIDAFCKEGKMDDAMLMFDKMLEKDPEPNVVTYSCLIDGFFKSENTKSAFE 731
Query: 347 CTSDMKKCFKTKFLQYC*L---*CSR*WSL*RRKNL*SIKGFSVRDKLCSLPDVEAYGIL 177
+M K + Y L C R L + +L F +PDV AYGIL
Sbjct: 732 LHEEMLKSISPNIISYSILIDGLCKR--GLVEKASL----AFHCAINRGLVPDVIAYGIL 785
Query: 176 N*GFCKVD-----------MLTDDGVVPDVLLPK 108
G+CKV MLT G++PD ++ +
Sbjct: 786 IHGYCKVGRTAEGLVLYGRMLT-SGIMPDAVIQR 818
>gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
Length = 690
Score = 68.2 bits (165), Expect(2) = 5e-15
Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
Frame = -2
Query: 1063 VYK--IVEGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF- 893
VYK + +GISP+ V Y ILIKGLCQ G++ EA G++ +ILK G E S +TYS+L+D F
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 892 --RNIRDGF 872
N+R GF
Sbjct: 438 KCGNLRSGF 446
Score = 42.7 bits (99), Expect(2) = 5e-15
Identities = 37/172 (21%), Positives = 64/172 (37%), Gaps = 8/172 (4%)
Frame = -1
Query: 869 LYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDARWF--------LKQWRVVLSRMLLFWC 714
LYE M+K VV Y LV G ++G A F ++ VV + ++ WC
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 713 EMKRIRDVLKVFKQSER*YRP*CSHLHLFSHGGHITW*VG*SFDYFSFK*EML*RFALSL 534
+ R + LKVF+ +
Sbjct: 508 RLNRFDEALKVFR---------------------------------------------LM 522
Query: 533 NSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID 378
G++P+ T+ ++ VS + R+++A+ F + + P+ + Y TLID
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
>ref|XP_010478604.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840 [Camelina sativa]
Length = 833
Score = 67.0 bits (162), Expect(2) = 7e-15
Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
Frame = -2
Query: 1063 VYK--IVEGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF- 893
VYK + +GISP+ V Y ILIKGLCQ G++ EA G++ ILK G E S +TYS+L+D F
Sbjct: 371 VYKRMLFQGISPNVVTYTILIKGLCQDGRIYEAFGIYGHILKRGLEPSVVTYSSLIDGFC 430
Query: 892 --RNIRDGF 872
++R GF
Sbjct: 431 KCGDLRSGF 439
Score = 43.5 bits (101), Expect(2) = 7e-15
Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 8/172 (4%)
Frame = -1
Query: 869 LYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDARWF--------LKQWRVVLSRMLLFWC 714
LYE M+K V+ Y LV G C++G +A F ++ VV + ++ WC
Sbjct: 441 LYEDMIKMGYTPDVIIYGVLVDGLCKQGLMLNALRFSVKTLGQSVQPNVVVFNSLINGWC 500
Query: 713 EMKRIRDVLKVFKQSER*YRP*CSHLHLFSHGGHITW*VG*SFDYFSFK*EML*RFALSL 534
++ R + LKVF+ +
Sbjct: 501 KLNRFDEALKVFR---------------------------------------------LI 515
Query: 533 NSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID 378
G++P+ T+ LI VS + R+++A+ F + + + + + TL+D
Sbjct: 516 GIYGIKPDVATFTSLIRVSVMEGRLEEALFLFFRMFKMGLELDAVAFCTLMD 567
>ref|XP_010906700.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840 [Elaeis guineensis]
Length = 718
Score = 68.2 bits (165), Expect(3) = 7e-15
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Frame = -2
Query: 1048 EGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVD---TFRNIRD 878
E + P+ + Y ILI GLCQ GQ+ EACG+FSRILK G E + LTYS+L+D N+++
Sbjct: 268 EDVMPNVITYSILINGLCQNGQVAEACGIFSRILKQGIEPNVLTYSSLIDGLCNAGNLKE 327
Query: 877 GFHYMSSW*RKVVF*KSSPILHLYRVFAK---------KGERLMLAGFLSNXXXXXXXXX 725
F K SP ++ V K RL++ L +
Sbjct: 328 AFDLYELMIGK----GFSPDAFVHSVLVKGLCKLGKMNDALRLLIKSGLESNTVTYNVLI 383
Query: 724 XXGVK*KESGMY*RCSNKVR-DNIDPDVVTCTFFLMGVT*RGK*DEALII 578
+ + G R + +N++PD+VT + + G+ G+ EA ++
Sbjct: 384 DGWCRARRLGDMLRVFRHLEVNNLEPDLVTFSVIIKGMVDEGRLREATMV 433
Score = 37.0 bits (84), Expect(3) = 7e-15
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Frame = -1
Query: 1259 ALELYNIMIEKGRTLDVVLCGTI---KCEVGKMKEGHDLLR 1146
A++ Y +M+EKG D+V+ G + C+ G++ EGH LLR
Sbjct: 188 AVDFYELMVEKGIASDLVVYGILIDGLCKEGRVNEGHGLLR 228
Score = 25.0 bits (53), Expect(3) = 7e-15
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 1101 YVKIGDF*GAIEEYTRLLKESLL 1033
YV++GD A E Y R+L+E ++
Sbjct: 249 YVRVGDVKKAFELYKRMLEEDVM 271
>ref|XP_006306763.1| hypothetical protein CARUB_v10008303mg [Capsella rubella]
gi|482575474|gb|EOA39661.1| hypothetical protein
CARUB_v10008303mg [Capsella rubella]
Length = 842
Score = 66.6 bits (161), Expect(2) = 2e-14
Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Frame = -2
Query: 1063 VYK--IVEGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF- 893
VYK + +GISP+ V Y ILIKGLCQ G++ EA G++ ILK G E S +TYS+L+D
Sbjct: 380 VYKRMLYQGISPNVVTYTILIKGLCQDGRIYEAFGIYGHILKRGLEPSVVTYSSLIDGLC 439
Query: 892 --RNIRDGF 872
N+R GF
Sbjct: 440 KCGNLRSGF 448
Score = 42.4 bits (98), Expect(2) = 2e-14
Identities = 33/172 (19%), Positives = 63/172 (36%), Gaps = 8/172 (4%)
Frame = -1
Query: 869 LYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDARWF--------LKQWRVVLSRMLLFWC 714
LYE M+K C V Y LV G C++G A F ++ V+ + ++ WC
Sbjct: 450 LYEDMIKMGCPPDVFIYGVLVDGLCKQGLMLHAMRFSVTTLGQSVQPNVVIFNSLIDGWC 509
Query: 713 EMKRIRDVLKVFKQSER*YRP*CSHLHLFSHGGHITW*VG*SFDYFSFK*EML*RFALSL 534
++ + LKVF+ +
Sbjct: 510 KLNHFDEALKVFR---------------------------------------------LI 524
Query: 533 NSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID 378
G++P+ T+ L+ VS + R ++A+ F + + P+ + + ++D
Sbjct: 525 GIYGIKPDVATFTTLMRVSVVEGRFEEAVFLFFRIFKMGLEPDAVAFCIIMD 576
>ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336793|gb|EFH67210.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 689
Score = 68.9 bits (167), Expect(2) = 2e-14
Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
Frame = -2
Query: 1063 VYK--IVEGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF- 893
VYK + +GISP+ V Y ILIKGLCQ G++ EA G++ +ILK G E S +TYS+L+D F
Sbjct: 270 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFC 329
Query: 892 --RNIRDGF 872
N+R GF
Sbjct: 330 KYGNLRSGF 338
Score = 40.0 bits (92), Expect(2) = 2e-14
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = -1
Query: 869 LYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDARWF--------LKQWRVVLSRMLLFWC 714
LYE M+K VV Y LV G C++G A F ++ VV + ++ WC
Sbjct: 340 LYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWC 399
Query: 713 EMKRIRDVLKVFK 675
+ R + LKVF+
Sbjct: 400 RLNRCDEALKVFR 412
>ref|XP_009372554.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840 [Pyrus x bretschneideri]
Length = 842
Score = 73.6 bits (179), Expect(2) = 3e-14
Identities = 61/182 (33%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Frame = -2
Query: 1048 EGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVD---TFRNIRD 878
EGISP+SV Y ILI +CQ G+++EACG+F RILK GF S LTYS+L++ +++D
Sbjct: 389 EGISPNSVSYTILINSMCQDGKVVEACGIFGRILKCGFVPSILTYSSLIEGMCKIGHLKD 448
Query: 877 GFHYMSSW*RKVVF*KSSPILHLYRVFAKKGERLMLAGFLSNXXXXXXXXXXXGVK*KES 698
GF S ++ P + LY V L G + + GVK
Sbjct: 449 GFQLYES----MIKMGYEPDIILYGVLL---NGLCKNGLMGDALRFFFQAVHRGVKPNVY 501
Query: 697 GMY*RCS-----NKVRD-----------NIDPDVVTCTFFLMGVT*RGK*DEALIIFLSS 566
++RD NI PDVVT T + G++ G+ ++AL+ F S
Sbjct: 502 TFNMLIDGFCRLKRLRDAVKVYIQMGIYNIKPDVVTNTVLMKGISEVGRLNDALVFFFQS 561
Query: 565 EK 560
K
Sbjct: 562 VK 563
Score = 35.0 bits (79), Expect(2) = 3e-14
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 536 LNSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLI 381
+ G+ P+ + +LIN+ K+ ID A F+ E P+ ITYNT+I
Sbjct: 596 MQRNGVNPDIAIYNVLINMLFKENCIDAAQEVFERFAESGPEPDIITYNTMI 647
Score = 45.4 bits (106), Expect(3) = 2e-08
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = -2
Query: 1066 RVYKIV--EGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF 893
++YKI+ +GI P V+Y IL+ G + G+ E C +FS L G +L + +S+++D +
Sbjct: 311 KLYKIMIEKGIGPDLVVYSILVDGFFKAGKFEEGCWLFSAALDCGIKLDVVIFSSVMDAY 370
Query: 892 RNIRD 878
I D
Sbjct: 371 VRIGD 375
Score = 33.1 bits (74), Expect(3) = 2e-08
Identities = 33/180 (18%), Positives = 65/180 (36%), Gaps = 8/180 (4%)
Frame = -1
Query: 875 VPLYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDARWFLKQWR--------VVLSRMLLF 720
V +Y M+K+ V+Y+ L+ C++G+ +A + + S ++
Sbjct: 380 VEVYRRMLKEGISPNSVSYTILINSMCQDGKVVEACGIFGRILKCGFVPSILTYSSLIEG 439
Query: 719 WCEMKRIRDVLKVFKQSER*YRP*CSHLHLFSHGGHITW*VG*SFDYFSFK*EML*RFAL 540
C++ ++D ++++
Sbjct: 440 MCKIGHLKDGFQLYE--------------------------------------------- 454
Query: 539 SLNSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLIDRTSNLK 360
S+ G EP+ I + +L+N K+ + A+ F V + PN T+N LID LK
Sbjct: 455 SMIKMGYEPDIILYGVLLNGLCKNGLMGDALRFFFQAVHRGVKPNVYTFNMLIDGFCRLK 514
Score = 29.3 bits (64), Expect(3) = 2e-08
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = -1
Query: 1292 LIQLLKVMRCE-ALELYNIMIEKGRTLDVVLCGTI---KCEVGKMKEGHDLLRV 1143
++ LL R E LE ++ +I++G +LD+V C I C+ ++ +G D V
Sbjct: 227 MVGLLNKGRFEMGLEFHSALIDRGFSLDIVACNKILKRLCKENQVGDGEDFFTV 280
Score = 62.8 bits (151), Expect = 1e-06
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Frame = -1
Query: 518 EPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID---RTSNLKICEV 348
+PN IT ILI+ K+ ++D A+L FD + E+D PN +TY+ LID ++ N K
Sbjct: 672 KPNAITCTILIDAFCKEGKMDDAMLMFDKMHERDPEPNVVTYSCLIDGFFKSENTKSAFE 731
Query: 347 CTSDMKKCFKTKFLQYC*L---*CSR*WSL*RRKNL*SIKGFSVRDKLCSLPDVEAYGIL 177
+M K + Y L C R L + +L F +PDV AYGIL
Sbjct: 732 LHEEMLKSVSPNIVSYSILIDGLCKR--GLVEKASL----AFHCAINRGLVPDVIAYGIL 785
Query: 176 N*GFCKVD-----------MLTDDGVVPDVLLPKT 105
G+CKV MLT G++PD ++ +T
Sbjct: 786 IRGYCKVGRTAEGLVLYGRMLT-SGIMPDAVIQRT 819
>ref|XP_006418059.1| hypothetical protein EUTSA_v10009444mg [Eutrema salsugineum]
gi|557095830|gb|ESQ36412.1| hypothetical protein
EUTSA_v10009444mg [Eutrema salsugineum]
Length = 827
Score = 65.9 bits (159), Expect(2) = 3e-14
Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
Frame = -2
Query: 1063 VYK--IVEGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF- 893
VYK + +GISP+ V Y ILIKGLCQ G++ EA G++ +ILK E S +TYS+L+D F
Sbjct: 365 VYKRMLCQGISPNVVTYTILIKGLCQDGKIYEAFGIYGQILKRCLEPSVVTYSSLIDGFC 424
Query: 892 --RNIRDGF 872
N+R GF
Sbjct: 425 KCGNLRSGF 433
Score = 42.7 bits (99), Expect(2) = 3e-14
Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 8/172 (4%)
Frame = -1
Query: 869 LYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDA-RWFLKQWR-------VVLSRMLLFWC 714
+YE M+K Y +V G C++G A R+F+K VV + ++ WC
Sbjct: 435 MYEDMIKMGHSPDDGIYGVIVDGLCKQGLMLHALRFFVKTLSQSVQTNVVVFNSLIDGWC 494
Query: 713 EMKRIRDVLKVFKQSER*YRP*CSHLHLFSHGGHITW*VG*SFDYFSFK*EML*RFALSL 534
++ R + LKVF+ +
Sbjct: 495 KLNRYEEALKVFR---------------------------------------------LM 509
Query: 533 NSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID 378
G++P+ T+ + VS + RI++A+ F + + F P+ + + TL+D
Sbjct: 510 GIYGIKPDVATFTTFMRVSVMEGRIEEALFLFFRMFKMGFEPDAVAFCTLMD 561
>ref|XP_009620715.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840 [Nicotiana tomentosiformis]
Length = 832
Score = 63.5 bits (153), Expect(3) = 3e-14
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Frame = -2
Query: 1048 EGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVDTF---RNIRD 878
E + P++V Y IL+ GLCQK QL+EA G+F ++LK+G E S L Y++L+D F ++D
Sbjct: 384 ERVLPTTVTYGILVNGLCQKDQLLEALGMFCQMLKHGIEPSLLMYNSLIDGFCKAGKLKD 443
Query: 877 GFHYMSSW*RKVVF*KSSPILHLYRV----FAKKG---------ERLMLAGFLSNXXXXX 737
GF ++++ + P + +Y V K+G + + +G N
Sbjct: 444 GFGLY----KEMLMKGNIPDVVVYNVIINALCKQGWMCAAMRFFYQAIKSGISPNIYIFN 499
Query: 736 XXXXXXGVK*KESGMY*RCSNKVRDNIDPDVVTCTFFLMGVT*RGK*DEALIIFLSSEK 560
+ + M NI PDVVT T + G+ +G+ DEAL F K
Sbjct: 500 TLIDGFCRLRQVNNMVNVYMQMGAWNILPDVVTHTVVIKGICEQGRCDEALAFFFQMLK 558
Score = 37.7 bits (86), Expect(3) = 3e-14
Identities = 17/56 (30%), Positives = 35/56 (62%)
Frame = -1
Query: 524 GLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLIDRTSNLKI 357
G+ P+ + +LIN K++++ A++ F+ V+E P+ +TYNT+I ++K+
Sbjct: 595 GINPDIALYNVLINAFFKESQLKNALVLFNEVLECGPPPDIVTYNTMICGYCSMKM 650
Score = 26.6 bits (57), Expect(3) = 3e-14
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -2
Query: 307 FNIVSYSVLVDGLCKGGRIYEVSRAF 230
+N +S ++L+D CK GR+ + F
Sbjct: 668 YNTISMTILIDAFCKEGRMDDAMSLF 693
>ref|XP_008785017.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840 [Phoenix dactylifera]
Length = 681
Score = 66.6 bits (161), Expect(3) = 3e-14
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Frame = -2
Query: 1048 EGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVD---TFRNIRD 878
E + P+ V Y ILI GLCQ ++ EACG+FSRILK G E + LTYS+L+D N+++
Sbjct: 231 EDVLPNVVTYSILINGLCQNDRVAEACGIFSRILKQGIEPNVLTYSSLIDGLCNAGNLKE 290
Query: 877 GFHYMSSW*RKVVF*KSSPILHLYRVFAK---------KGERLMLAGFLSNXXXXXXXXX 725
F ++ SP +Y V K RL++ L +
Sbjct: 291 AFELY----ELMINQGFSPDAFVYSVLIKGLCKLGRMNDALRLLIKSGLKSNTVTYNVLI 346
Query: 724 XXGVK*KESGMY*RCSNK-VRDNIDPDVVTCTFFLMGVT*RGK*DEALII 578
+ K G R + V N++PD+VT + + G+ G+ EA ++
Sbjct: 347 DGLCRAKRLGDMLRVFRQLVVKNLEPDLVTFSVIIKGMADEGRLREATMV 396
Score = 35.4 bits (80), Expect(3) = 3e-14
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Frame = -1
Query: 1259 ALELYNIMIEKGRTLDVVLCGTI---KCEVGKMKEGHDLLR 1146
A+ +Y +M+EKG D+V+ G + C+ G++ EGH LLR
Sbjct: 151 AVGVYELMVEKGIAPDLVVYGILIDGLCKEGRVNEGHGLLR 191
Score = 25.8 bits (55), Expect(3) = 3e-14
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 1101 YVKIGDF*GAIEEYTRLLKESLL 1033
YV++GD A E Y R+L+E +L
Sbjct: 212 YVRVGDVKKAFELYKRMLEEDVL 234
Score = 60.1 bits (144), Expect = 8e-06
Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Frame = -1
Query: 533 NSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID---RTSNL 363
+ +GL+PN IT+ ILI+ K+ R+D+A+L F+ +++K PN +TY L+D + N
Sbjct: 507 DERGLQPNAITFTILIDAFCKEGRMDEAMLFFNKMLDKGPLPNVVTYGCLVDGRFKAQNF 566
Query: 362 KICEVCTSDMKKCFKT-KFLQYC*L*CSR*WSL*RRKNL*SIK-GFSVRDKLCSLPDVEA 189
K +M T + Y L L + L F LPDV A
Sbjct: 567 KNAIALHEEMLNNHVTPNIISYSILID----GLCKAGQLEEASLAFHCAVNRGLLPDVVA 622
Query: 188 YGILN*GFCKVDMLTD----------DGVVPDVLLPKT 105
YGIL GFC V L + DGV PD L+ T
Sbjct: 623 YGILIRGFCAVGRLAEARMFYNKMVADGVKPDSLVYST 660
>ref|XP_010499732.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840 [Camelina sativa]
Length = 839
Score = 62.4 bits (150), Expect(2) = 4e-14
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Frame = -2
Query: 1063 VYK--IVEGISPSSVIYYILIKGLCQKGQLIEACGVFSRILKNGFELSGLTYSTLVD 899
VYK + +GISP+ V Y ILIKGLCQ G++ EA G++ ILK G + S +TYS+L+D
Sbjct: 377 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYGHILKRGLKPSVVTYSSLID 433
Score = 45.4 bits (106), Expect(2) = 4e-14
Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 8/172 (4%)
Frame = -1
Query: 869 LYEFMVKKSCVLKVVTYSALVQGFCEEGRTTDA-RWFLKQWR-------VVLSRMLLFWC 714
LYE M++ VV YS LV G C++G A R+ +K R VV + ++ W
Sbjct: 447 LYEDMIQMGYTPDVVIYSVLVDGLCKQGLMLHALRFSVKTLRQSVQPSVVVFNSLINGWY 506
Query: 713 EMKRIRDVLKVFKQSER*YRP*CSHLHLFSHGGHITW*VG*SFDYFSFK*EML*RFALSL 534
++ R +VLKVF+ +
Sbjct: 507 KLNRFEEVLKVFR---------------------------------------------LI 521
Query: 533 NSKGLEPNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID 378
G++P+ T+ L+ VS + ++++A+ F + + P+ + + TL+D
Sbjct: 522 GVYGIKPDVATFTTLMRVSVMEGKLEEALFLFFRMFKMGLEPDAVAFCTLMD 573
Score = 50.1 bits (118), Expect(2) = 8e-06
Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 17/153 (11%)
Frame = -1
Query: 515 PNTITWIILINVSSKDARIDKAILAFDLVVEKDFTPNCITYNTLID---RTSNLKICEVC 345
PN++T ILI+ K+ +D AI F + EKD PN +TY L+D ++ +++
Sbjct: 668 PNSVTLTILIHALCKNNDMDDAIRIFSTMKEKDPNPNVVTYGCLMDWFSKSVDIEGSFKL 727
Query: 344 TSDM-KKCFKTKFLQYC*L---*CSR*WSL*RRKNL*SIKGFSVRDKLCSLPDVEAYGIL 177
DM +K + Y + C R R +I ++ KL LPDV AYGIL
Sbjct: 728 FEDMQEKGISPSIISYSIIIDGLCKR----GRVDEAKNIFHQAIDSKL--LPDVVAYGIL 781
Query: 176 N*GFCKVDMLTD----------DGVVPDVLLPK 108
G CKV L + +GV PD LL +
Sbjct: 782 IRGCCKVGRLVEAALLYEHMLRNGVKPDDLLQR 814
Score = 29.6 bits (65), Expect(2) = 8e-06
Identities = 41/188 (21%), Positives = 69/188 (36%), Gaps = 5/188 (2%)
Frame = -2
Query: 1123 SI*MFMTLC*NWRFLRSN*RVYKI-----VEGISPSSVIYYILIKGLCQKGQLIEACGVF 959
S+ +F +L W L V K+ V GI P + L++ +G+L EA +F
Sbjct: 494 SVVVFNSLINGWYKLNRFEEVLKVFRLIGVYGIKPDVATFTTLMRVSVMEGKLEEALFLF 553
Query: 958 SRILKNGFELSGLTYSTLVDTFRNIRDGFHYMSSW*RKVVF*KSSPILHLYRVFAKKGER 779
R+ K G E + + TL+D F P + L + R
Sbjct: 554 FRMFKMGLEPDAVAFCTLMDAFCK------------------HMKPTIGLQLFDLMQRNR 595
Query: 778 LMLAGFLSNXXXXXXXXXXXGVK*KESGMY*RCSNKVRDNIDPDVVTCTFFLMGVT*RGK 599
+ + N +++ Y + N + ++PD+VT + G +
Sbjct: 596 ISADIAVCNVVINLLFKSHCA---EDASKYFK--NLLEGKMEPDIVTYNTMICGFCSLRR 650
Query: 598 *DEALIIF 575
DEA IF
Sbjct: 651 LDEAARIF 658