BLASTX nr result
ID: Papaver29_contig00039001
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00039001
(523 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012091573.1| PREDICTED: mediator of RNA polymerase II tra... 65 2e-09
ref|XP_012091574.1| PREDICTED: mediator of RNA polymerase II tra... 65 2e-09
ref|XP_008225051.1| PREDICTED: mediator of RNA polymerase II tra... 63 5e-09
ref|XP_007214550.1| hypothetical protein PRUPE_ppa000947mg [Prun... 63 5e-09
ref|XP_004485757.1| PREDICTED: mediator of RNA polymerase II tra... 62 6e-09
ref|XP_012568420.1| PREDICTED: mediator of RNA polymerase II tra... 62 7e-09
ref|XP_004485758.1| PREDICTED: mediator of RNA polymerase II tra... 62 7e-09
ref|XP_012568428.1| PREDICTED: mediator of RNA polymerase II tra... 62 7e-09
ref|XP_011653115.1| PREDICTED: mediator of RNA polymerase II tra... 62 8e-09
ref|XP_008442342.1| PREDICTED: mediator of RNA polymerase II tra... 62 8e-09
ref|XP_010241990.1| PREDICTED: mediator of RNA polymerase II tra... 66 1e-08
ref|XP_010241989.1| PREDICTED: mediator of RNA polymerase II tra... 66 1e-08
ref|XP_002305810.2| hypothetical protein POPTR_0004s04050g [Popu... 62 1e-08
ref|XP_012572579.1| PREDICTED: mediator of RNA polymerase II tra... 63 2e-08
ref|XP_012572580.1| PREDICTED: mediator of RNA polymerase II tra... 63 2e-08
gb|KDO75885.1| hypothetical protein CISIN_1g0008482mg, partial [... 65 2e-08
ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II tra... 65 2e-08
ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II tra... 65 2e-08
ref|XP_007159313.1| hypothetical protein PHAVU_002G227600g [Phas... 65 2e-08
ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citr... 65 2e-08
>ref|XP_012091573.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Jatropha curcas] gi|643703880|gb|KDP20944.1|
hypothetical protein JCGZ_21415 [Jatropha curcas]
Length = 1249
Score = 65.1 bits (157), Expect(2) = 2e-09
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP SQN A K F+T
Sbjct: 246 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNNATPKWFST 284
Score = 23.1 bits (48), Expect(2) = 2e-09
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Frame = -3
Query: 122 SKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV 12
SK L AGPSGIM VN S VV WEV
Sbjct: 285 SKGLLGAGPSGIMAADAIVTDSGAMHVAGVPIVNPSTVVVWEV 327
>ref|XP_012091574.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Jatropha curcas]
Length = 1164
Score = 65.1 bits (157), Expect(2) = 2e-09
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP SQN A K F+T
Sbjct: 161 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNNATPKWFST 199
Score = 23.1 bits (48), Expect(2) = 2e-09
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Frame = -3
Query: 122 SKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV 12
SK L AGPSGIM VN S VV WEV
Sbjct: 200 SKGLLGAGPSGIMAADAIVTDSGAMHVAGVPIVNPSTVVVWEV 242
>ref|XP_008225051.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Prunus mume]
Length = 1243
Score = 63.2 bits (152), Expect(2) = 5e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP +QN A K F T
Sbjct: 241 ARWPNFLCVCSVFSSGSVQLHWSQWPPNQNSAAPKWFQT 279
Score = 23.9 bits (50), Expect(2) = 5e-09
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Frame = -3
Query: 122 SKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 3
SK L AGPSGIM VN S VV WEV NGF
Sbjct: 280 SKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGLGNGF 330
>ref|XP_007214550.1| hypothetical protein PRUPE_ppa000947mg [Prunus persica]
gi|462410415|gb|EMJ15749.1| hypothetical protein
PRUPE_ppa000947mg [Prunus persica]
Length = 953
Score = 63.2 bits (152), Expect(2) = 5e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP +QN A K F T
Sbjct: 241 ARWPNFLCVCSVFSSGSVQLHWSQWPPNQNSAAPKWFQT 279
Score = 23.9 bits (50), Expect(2) = 5e-09
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Frame = -3
Query: 122 SKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 3
SK L AGPSGIM VN S VV WEV NGF
Sbjct: 280 SKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGLGNGF 330
>ref|XP_004485757.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Cicer arietinum]
gi|828287445|ref|XP_012568418.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 16-like isoform
X2 [Cicer arietinum]
Length = 1247
Score = 61.6 bits (148), Expect(2) = 6e-09
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP SQN K F T
Sbjct: 248 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNATPPKWFYT 286
Score = 25.0 bits (53), Expect(2) = 6e-09
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 11/56 (19%)
Frame = -3
Query: 137 KAVYNSKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 3
K Y SK L GPSGIM VN S +V WEV NGF
Sbjct: 282 KWFYTSKGLLGCGPSGIMAGDAIITESGAMHVAGVPIVNPSTIVVWEVMPGPGNGF 337
>ref|XP_012568420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X3 [Cicer arietinum]
Length = 1109
Score = 61.6 bits (148), Expect(2) = 7e-09
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP SQN K F T
Sbjct: 110 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNATPPKWFYT 148
Score = 25.0 bits (53), Expect(2) = 7e-09
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 11/56 (19%)
Frame = -3
Query: 137 KAVYNSKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 3
K Y SK L GPSGIM VN S +V WEV NGF
Sbjct: 144 KWFYTSKGLLGCGPSGIMAGDAIITESGAMHVAGVPIVNPSTIVVWEVMPGPGNGF 199
>ref|XP_004485758.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X4 [Cicer arietinum]
gi|828287450|ref|XP_012568427.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 16-like isoform
X4 [Cicer arietinum]
Length = 1047
Score = 61.6 bits (148), Expect(2) = 7e-09
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP SQN K F T
Sbjct: 48 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNATPPKWFYT 86
Score = 25.0 bits (53), Expect(2) = 7e-09
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 11/56 (19%)
Frame = -3
Query: 137 KAVYNSKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 3
K Y SK L GPSGIM VN S +V WEV NGF
Sbjct: 82 KWFYTSKGLLGCGPSGIMAGDAIITESGAMHVAGVPIVNPSTIVVWEVMPGPGNGF 137
>ref|XP_012568428.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X5 [Cicer arietinum]
Length = 1027
Score = 61.6 bits (148), Expect(2) = 7e-09
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -1
Query: 244 IQARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
I RWPNFLC CS+ SS SVQLHWS WP SQN K F T
Sbjct: 26 ISTRWPNFLCVCSVFSSGSVQLHWSQWPPSQNATPPKWFYT 66
Score = 25.0 bits (53), Expect(2) = 7e-09
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 11/56 (19%)
Frame = -3
Query: 137 KAVYNSKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 3
K Y SK L GPSGIM VN S +V WEV NGF
Sbjct: 62 KWFYTSKGLLGCGPSGIMAGDAIITESGAMHVAGVPIVNPSTIVVWEVMPGPGNGF 117
>ref|XP_011653115.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Cucumis sativus] gi|700209568|gb|KGN64664.1|
hypothetical protein Csa_1G073710 [Cucumis sativus]
Length = 1237
Score = 62.4 bits (150), Expect(2) = 8e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP SQN + K F T
Sbjct: 235 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNSSPPKWFCT 273
Score = 23.9 bits (50), Expect(2) = 8e-09
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Frame = -3
Query: 122 SKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 3
SK L AGPSGIM VN S VV WEV NGF
Sbjct: 274 SKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGF 324
>ref|XP_008442342.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Cucumis melo]
Length = 1237
Score = 62.4 bits (150), Expect(2) = 8e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP SQN + K F T
Sbjct: 235 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNSSPPKWFCT 273
Score = 23.9 bits (50), Expect(2) = 8e-09
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Frame = -3
Query: 122 SKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 3
SK L AGPSGIM VN S VV WEV NGF
Sbjct: 274 SKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGF 324
>ref|XP_010241990.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Nelumbo nucifera]
Length = 998
Score = 65.9 bits (159), Expect = 1e-08
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP +Q GA SK F+T
Sbjct: 239 ARWPNFLCVCSVFSSGSVQLHWSQWPPNQTGAASKWFST 277
>ref|XP_010241989.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Nelumbo nucifera]
Length = 1231
Score = 65.9 bits (159), Expect = 1e-08
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP +Q GA SK F+T
Sbjct: 239 ARWPNFLCVCSVFSSGSVQLHWSQWPPNQTGAASKWFST 277
>ref|XP_002305810.2| hypothetical protein POPTR_0004s04050g [Populus trichocarpa]
gi|550340281|gb|EEE86321.2| hypothetical protein
POPTR_0004s04050g [Populus trichocarpa]
Length = 1328
Score = 61.6 bits (148), Expect(2) = 1e-08
Identities = 26/41 (63%), Positives = 29/41 (70%)
Frame = -1
Query: 244 IQARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
+Q+RWPNFLC CS+ SS VQLHWS WP SQN K F T
Sbjct: 275 MQSRWPNFLCVCSVFSSGCVQLHWSQWPPSQNNTSPKWFCT 315
Score = 23.9 bits (50), Expect(2) = 1e-08
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Frame = -3
Query: 122 SKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 3
SK L AGPSGIM VN S VV WEV NGF
Sbjct: 316 SKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGF 366
>ref|XP_012572579.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Cicer arietinum]
Length = 1245
Score = 63.2 bits (152), Expect(2) = 2e-08
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP SQNG+ F T
Sbjct: 249 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNGSTPSWFHT 287
Score = 21.9 bits (45), Expect(2) = 2e-08
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Frame = -3
Query: 128 YNSKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV 12
+ SK L GPSGIM VN S +V WEV
Sbjct: 286 HTSKGLLGCGPSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEV 330
>ref|XP_012572580.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Cicer arietinum]
Length = 1052
Score = 63.2 bits (152), Expect(2) = 2e-08
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP SQNG+ F T
Sbjct: 56 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNGSTPSWFHT 94
Score = 21.9 bits (45), Expect(2) = 2e-08
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Frame = -3
Query: 128 YNSKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV 12
+ SK L GPSGIM VN S +V WEV
Sbjct: 93 HTSKGLLGCGPSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEV 137
>gb|KDO75885.1| hypothetical protein CISIN_1g0008482mg, partial [Citrus sinensis]
gi|641857120|gb|KDO75886.1| hypothetical protein
CISIN_1g0008482mg, partial [Citrus sinensis]
gi|641857121|gb|KDO75887.1| hypothetical protein
CISIN_1g0008482mg, partial [Citrus sinensis]
gi|641857122|gb|KDO75888.1| hypothetical protein
CISIN_1g0008482mg, partial [Citrus sinensis]
gi|641857123|gb|KDO75889.1| hypothetical protein
CISIN_1g0008482mg, partial [Citrus sinensis]
Length = 452
Score = 65.1 bits (157), Expect = 2e-08
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = -1
Query: 235 RWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTTVR 116
RWPNFLC CS+ SS SVQL+WS WP SQNGA SK F T +
Sbjct: 255 RWPNFLCVCSVFSSGSVQLNWSQWPPSQNGAASKWFPTAK 294
>ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Citrus sinensis]
Length = 1057
Score = 65.1 bits (157), Expect = 2e-08
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = -1
Query: 235 RWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTTVR 116
RWPNFLC CS+ SS SVQL+WS WP SQNGA SK F T +
Sbjct: 57 RWPNFLCVCSVFSSGSVQLNWSQWPPSQNGAASKWFPTAK 96
>ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Citrus sinensis]
Length = 1255
Score = 65.1 bits (157), Expect = 2e-08
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = -1
Query: 235 RWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTTVR 116
RWPNFLC CS+ SS SVQL+WS WP SQNGA SK F T +
Sbjct: 255 RWPNFLCVCSVFSSGSVQLNWSQWPPSQNGAASKWFPTAK 294
>ref|XP_007159313.1| hypothetical protein PHAVU_002G227600g [Phaseolus vulgaris]
gi|561032728|gb|ESW31307.1| hypothetical protein
PHAVU_002G227600g [Phaseolus vulgaris]
Length = 1241
Score = 65.1 bits (157), Expect = 2e-08
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = -1
Query: 238 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 122
ARWPNFLC CS+ SS SVQLHWS WP S+NG I K F T
Sbjct: 248 ARWPNFLCVCSVFSSGSVQLHWSQWPPSKNGMIPKWFCT 286
>ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citrus clementina]
gi|557551917|gb|ESR62546.1| hypothetical protein
CICLE_v10014062mg [Citrus clementina]
Length = 1252
Score = 65.1 bits (157), Expect = 2e-08
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = -1
Query: 235 RWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTTVR 116
RWPNFLC CS+ SS SVQL+WS WP SQNGA SK F T +
Sbjct: 252 RWPNFLCVCSVFSSGSVQLNWSQWPPSQNGAASKWFPTAK 291