BLASTX nr result

ID: Papaver29_contig00038199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00038199
         (1640 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...    60   6e-06
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A...    60   6e-06
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A...    60   6e-06

>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score = 60.1 bits (144), Expect = 6e-06
 Identities = 34/103 (33%), Positives = 61/103 (59%)
 Frame = -3

Query: 1206 ILRELDIPYQKVKMIKVNDCFFTLPEMHPILLCCDGASRGNPGIAGYGFIGRNHEGDFVI 1027
            I++ L+   +K+ +++V    +  P+ H +    DGA RGNPG++ +GF  R+ +GD + 
Sbjct: 682  IIQRLNQYKRKIHVLRVT---WKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDDKGDLIY 738

Query: 1026 AENGNIGIASNFMAELIVIIRAL*WAMSSCSQCVLLQSDYSSV 898
            A+   IGIA+N  AE + I+ AL    +   Q V++++D  S+
Sbjct: 739  AKAKGIGIATNMEAETVAILTALRECSNRKMQKVIIETDSLSL 781


>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 143

 Score = 60.1 bits (144), Expect = 6e-06
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
 Frame = -3

Query: 1134 PEMHPILLCCDGASRGNPGIAGYGFIGRNHEGDFVIAENGNIGIASNFMAELIVIIRAL* 955
            PE+  I    DGAS+GNP  + YGF  RNH G+ + AE  +IG+ +N  AE + I +AL 
Sbjct: 22   PEIGWIKCNTDGASKGNPDQSSYGFCIRNHTGELLYAEVQSIGVTTNMDAESMAIWKALQ 81

Query: 954  WAMSSCSQCVLLQSDYSSVIQAYVIN-NLPW 865
            + +S   Q V L++D  ++    V N   PW
Sbjct: 82   YCLSQGFQQVSLETDSLTLKNILVRNWKTPW 112


>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 198

 Score = 60.1 bits (144), Expect = 6e-06
 Identities = 30/76 (39%), Positives = 48/76 (63%)
 Frame = -3

Query: 1104 DGASRGNPGIAGYGFIGRNHEGDFVIAENGNIGIASNFMAELIVIIRAL*WAMSSCSQCV 925
            DGAS+GNPGI+ YG+  RN  GD +     NIGI +N  AE+  I+ A+ + ++   + +
Sbjct: 32   DGASKGNPGISAYGYCLRNSNGDLIHVTAENIGITTNVEAEMRAILEAIRYCVNKKMRKI 91

Query: 924  LLQSDYSSVIQAYVIN 877
            +L+SD  S++   +IN
Sbjct: 92   ILESD--SLLMVKIIN 105


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