BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00036467
         (458 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi...    75   2e-11
ref|XP_011031446.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08
ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Popu...    63   7e-08
gb|KHG17652.1| Pentatricopeptide repeat-containing, chloroplasti...    62   1e-07
ref|XP_012444499.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
ref|XP_008220663.1| PREDICTED: pentatricopeptide repeat-containi...    60   6e-07
ref|XP_009359126.1| PREDICTED: pentatricopeptide repeat-containi...    60   8e-07
ref|XP_009359106.1| PREDICTED: pentatricopeptide repeat-containi...    60   8e-07
ref|XP_008377633.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    59   1e-06
ref|XP_002515418.1| pentatricopeptide repeat-containing protein,...    58   3e-06

>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|731386116|ref|XP_010648751.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|731386118|ref|XP_010648752.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|731386120|ref|XP_010648753.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|731386122|ref|XP_010648754.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|731386124|ref|XP_010648755.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|296082142|emb|CBI21147.3| unnamed protein product
           [Vitis vinifera]
          Length = 1113

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 49/115 (42%), Positives = 65/115 (56%)
 Frame = -1

Query: 347 VSSSSMCTSNLRFSVVQYDFKPSPFANEYHQFMKRRKIENLKVLTDGFASISGRNWKKKS 168
           +SSSS C S  ++       KPS  +   ++ +   KI NLKVL  G       NWKK  
Sbjct: 6   LSSSSSCCSKFKYGCAVTGTKPSVLS--CNESLGGIKIGNLKVLPSGCRV----NWKKH- 58

Query: 167 RRKQAGICGFLVKSSLEMGRGKPTSSGLSSDEEVIRVLQSISDPI*AMSYFKSVA 3
           R+KQ G+CGF+++SS ++   K       S EEV RVL+SISDP  A S+F SVA
Sbjct: 59  RKKQVGVCGFVIRSSFDVVVVKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVA 113


>ref|XP_011031446.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Populus euphratica]
          Length = 1115

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
 Frame = -1

Query: 356 LLEVSSSSMCTSNLRFSVVQYDFKPSPFANEYHQFMKRRKIENLKVLTDGFASISGRNWK 177
           +L +SSSSMC S + +S+V  +          +  +   K   L+V   G    S  NWK
Sbjct: 3   VLILSSSSMCCSCIHYSIVFSEQNRLSDFRHKNGSLGGEKFGTLRVFPFG----SNVNWK 58

Query: 176 KKSRRKQAGICGFLVKSSLE--MGRGKPTSSGLSSDEEVIRVLQSISDPI*AMSYFKSV 6
           K ++ KQ   CG  +KS  E  +  GKP     SS +EV+ VL SISDPI A+ YFKSV
Sbjct: 59  KNNK-KQVAFCGIALKSQNEDLVVNGKPRKG--SSSDEVLGVLHSISDPIHALFYFKSV 114


>ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Populus trichocarpa]
           gi|550337245|gb|EEE92232.2| hypothetical protein
           POPTR_0006s28060g [Populus trichocarpa]
          Length = 1115

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
 Frame = -1

Query: 356 LLEVSSSSMCTSNLRFSVVQYDFKPSPFANEYHQFMKRRKIENLKVLTDGFASISGRNWK 177
           +L +SSSSMC S + +S+   +          +  +   K   L+V   G    S  NWK
Sbjct: 3   VLILSSSSMCCSCIDYSIAFSEQNRLSDFRHKNGSLGGEKFGTLRVFPFG----SNVNWK 58

Query: 176 KKSRRKQAGICGFLVKSSLE--MGRGKPTSSGLSSDEEVIRVLQSISDPI*AMSYFKSV 6
           K ++ KQ   CGF +KS  E  +  GKP     SS +EV+ VL SISDPI A+ YFKSV
Sbjct: 59  KNNK-KQVAFCGFALKSQNEELVVNGKPRKG--SSSDEVLGVLHSISDPIHALFYFKSV 114


>gb|KHG17652.1| Pentatricopeptide repeat-containing, chloroplastic -like protein
           [Gossypium arboreum]
          Length = 1124

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 53/120 (44%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
 Frame = -1

Query: 356 LLEVSSSSMCTSNLRFSVVQYDFKPSPFANEYHQFMKRRKIENLKVLTDGFASISGRNWK 177
           +L + S S C ++L +S V  D K S F+++   F   RKI   KV  DG+      +W+
Sbjct: 3   VLILYSMSACCNSLNYSCVLVDSKVSAFSHKNVSF-GGRKIGKFKVFPDGYMV----SWR 57

Query: 176 KKSRRKQAGICGFLVKSSLEM--GRGKPTSSGLSSDEEVIRVLQSISDPI*AMSYFKSVA 3
           K  RRKQ  +  +++K+S EM    GK  +S LSSDE V RVL+SISDP  A SYF+SVA
Sbjct: 58  K--RRKQQ-LSFYVMKNSCEMVLANGKCRNS-LSSDE-VSRVLKSISDPKSAFSYFESVA 112


>ref|XP_012444499.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Gossypium raimondii]
           gi|823223511|ref|XP_012444500.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Gossypium raimondii]
           gi|763788106|gb|KJB55102.1| hypothetical protein
           B456_009G063400 [Gossypium raimondii]
          Length = 1112

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 48/118 (40%), Positives = 65/118 (55%)
 Frame = -1

Query: 356 LLEVSSSSMCTSNLRFSVVQYDFKPSPFANEYHQFMKRRKIENLKVLTDGFASISGRNWK 177
           +L + S S C ++L +S V  D K S F+++   F   RKI   KV  DG+      +WK
Sbjct: 3   VLILCSMSACCNSLNYSCVLVDSKVSAFSHKNVSF-GGRKIGKFKVFPDGYMV----SWK 57

Query: 176 KKSRRKQAGICGFLVKSSLEMGRGKPTSSGLSSDEEVIRVLQSISDPI*AMSYFKSVA 3
           K  RRKQ  +  +++K+S EM           S  EV RVL+SISDP  A SYF+SVA
Sbjct: 58  K--RRKQQ-LRFYVMKNSCEMVLANGKCRNSLSSNEVSRVLKSISDPKSAFSYFESVA 112


>ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Citrus sinensis]
          Length = 1107

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 49/120 (40%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
 Frame = -1

Query: 356 LLEVSSSSMCTSNLRFSVVQYDFKPSPFANEYHQFMKRRKIENLKVLTDGFASISGRNWK 177
           LL + SSS C S + +S   + +     ++  +  +   K+ NLKV           NWK
Sbjct: 3   LLVIDSSSTCCSTISYSFA-FTYSKLHASSYNNGSVGGLKVGNLKV-----------NWK 50

Query: 176 KKSRRKQAGICGFLVKSSLE--MGRGKPTSSGLSSDEEVIRVLQSISDPI*AMSYFKSVA 3
           K  + KQ G CG+++KSS E  + +GKP  +GL+S EEVIRVL+S SD     SYFKSVA
Sbjct: 51  KHWK-KQVGFCGYVMKSSNEVVVVKGKP-RNGLTS-EEVIRVLRSFSDLDSTYSYFKSVA 107


>ref|XP_008220663.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Prunus mume]
           gi|645227747|ref|XP_008220664.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Prunus mume]
          Length = 1113

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 47/118 (39%), Positives = 65/118 (55%)
 Frame = -1

Query: 356 LLEVSSSSMCTSNLRFSVVQYDFKPSPFANEYHQFMKRRKIENLKVLTDGFASISGRNWK 177
           LL V S+SMC S++ +S+   D +   FA  +   +K R    LK     +   S  N  
Sbjct: 3   LLIVCSASMCCSSINYSLAFTDNRI--FAISHTGSLKERNCGKLKA----WPCRSLVNLT 56

Query: 176 KKSRRKQAGICGFLVKSSLEMGRGKPTSSGLSSDEEVIRVLQSISDPI*AMSYFKSVA 3
           KK R+K+ G  GF++KSS E+   K       S EEV+RVL+SI+DP  A S+FKS A
Sbjct: 57  KK-RKKRMGFGGFVIKSSQEVVVAKKKPKISVSSEEVVRVLKSIADPKSAFSFFKSFA 113


>ref|XP_009359126.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 1122

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
 Frame = -1

Query: 356 LLEVSSSSMCTSNLRFSVVQYDFKPSPFANEYHQFMKRRKIENLKVLTDGFASISGRNWK 177
           LL V SSSMC S++ +S    D +   FA  +   +K R    L V   G  S+S     
Sbjct: 3   LLIVCSSSMCCSSVNYSFSFTDNRI--FAISHFGSLKARNFGKLNVW--GCGSLSNLT-- 56

Query: 176 KKSRRKQAGICGFLVKSSLE----MGRGKPTSSGLSSDEEVIRVLQSISDPI*AMSYFKS 9
            K R+K  G CGF++K S E    +G+  P  S   S EEV+RVL+S+SDP  A++ FKS
Sbjct: 57  -KKRKKGMGFCGFVMKRSEEEEVVVGKKNPKIS--VSSEEVMRVLKSVSDPKSALALFKS 113

Query: 8   VA 3
            A
Sbjct: 114 FA 115


>ref|XP_009359106.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 1115

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
 Frame = -1

Query: 356 LLEVSSSSMCTSNLRFSVVQYDFKPSPFANEYHQFMKRRKIENLKVLTDGFASISGRNWK 177
           LL V SSSMC S++ +S    D +   FA  +   +K R    L V   G  S+S     
Sbjct: 3   LLIVCSSSMCCSSVNYSFSFTDNRI--FAISHFGSLKARNFGKLNVW--GCGSLSNLT-- 56

Query: 176 KKSRRKQAGICGFLVKSSLE----MGRGKPTSSGLSSDEEVIRVLQSISDPI*AMSYFKS 9
            K R+K  G CGF++K S E    +G+  P  S   S EEV+RVL+S+SDP  A++ FKS
Sbjct: 57  -KKRKKGMGFCGFVMKRSEEEEVVVGKKNPKIS--VSSEEVMRVLKSVSDPKSALALFKS 113

Query: 8   VA 3
            A
Sbjct: 114 FA 115


>ref|XP_008377633.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic [Malus domestica]
          Length = 1110

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
 Frame = -1

Query: 356 LLEVSSSSMCTSNLRFSVVQYDFKPSPFANEYHQFMKRRKIENLKVLTDGFASISGRNWK 177
           LL V SSSMC S++  SV   D +   FA      +K R    LKV   G  S+S     
Sbjct: 3   LLIVCSSSMCCSSVNXSVAFTDDRI--FAGS----LKARNFGKLKVW--GCGSLSNL--- 51

Query: 176 KKSRRKQAGICGFLVKSSLE---MGRGKPTSSGLSSDEEVIRVLQSISDPI*AMSYFKSV 6
           KK+ +K  G CGF++K S E   +G+  P  S   S EEV+RVL+S SDP  A++ FKS 
Sbjct: 52  KKNXKKXMGFCGFVMKRSEEEVVVGKKSPKIS--VSSEEVVRVLKSASDPKSALALFKSF 109

Query: 5   A 3
           A
Sbjct: 110 A 110


>ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545362|gb|EEF46867.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1113

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
 Frame = -1

Query: 332 MCTSNLRFSVVQYDF---KPSPFANEYHQ--FMKRRKIENLKVLTDGFASISGRNWKKKS 168
           +C+SN+ ++ V Y +   K + F    H     K R++ NL  LT G  SI    W+K  
Sbjct: 6   ICSSNIYYASVNYGYTFTKVNTFPAFIHNNGISKGRRVRNLNFLTCGSLSI----WEKHK 61

Query: 167 RRKQAGICGFLVKSSLEMGRGKPTSSGLSSDEEVIRVLQSISDPI*AMSYFKSVA 3
            R Q G  G  VKSS  +   K       S +EV+ VL SI DP  A SYF SVA
Sbjct: 62  ER-QVGFGGVAVKSSHGLVVAKRKPKNALSSKEVMAVLNSILDPTDAFSYFNSVA 115