BLASTX nr result
ID: Papaver29_contig00036331
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00036331
(963 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004303709.1| PREDICTED: sm-like protein LSM1B [Fragaria v... 47 8e-10
ref|XP_011036474.1| PREDICTED: probable U6 snRNA-associated Sm-l... 48 1e-09
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri... 48 1e-09
ref|XP_010261783.1| PREDICTED: U6 snRNA-associated Sm-like prote... 49 2e-09
ref|XP_011012019.1| PREDICTED: probable U6 snRNA-associated Sm-l... 47 6e-09
ref|XP_006369123.1| small nuclear ribonucleoprotein [Populus tri... 47 6e-09
ref|XP_009622144.1| PREDICTED: probable U6 snRNA-associated Sm-l... 49 1e-08
ref|XP_004235554.1| PREDICTED: probable U6 snRNA-associated Sm-l... 49 1e-08
emb|CDO97831.1| unnamed protein product [Coffea canephora] 49 2e-08
ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like prote... 48 2e-08
ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-l... 47 2e-08
ref|XP_012077075.1| PREDICTED: sm-like protein LSM1B [Jatropha c... 48 2e-08
ref|XP_009613010.1| PREDICTED: U6 snRNA-associated Sm-like prote... 49 5e-08
ref|XP_014516657.1| PREDICTED: sm-like protein LSM1B [Vigna radi... 45 5e-08
ref|XP_014516656.1| PREDICTED: sm-like protein LSM1B isoform X2 ... 45 5e-08
ref|XP_006598838.1| PREDICTED: probable U6 snRNA-associated Sm-l... 45 5e-08
ref|XP_007135420.1| hypothetical protein PHAVU_010G127900g [Phas... 45 5e-08
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin... 45 5e-08
gb|KJB07332.1| hypothetical protein B456_001G016100 [Gossypium r... 48 8e-08
ref|XP_012481954.1| PREDICTED: sm-like protein LSM1B [Gossypium ... 48 8e-08
>ref|XP_004303709.1| PREDICTED: sm-like protein LSM1B [Fragaria vesca subsp. vesca]
Length = 128
Score = 47.4 bits (111), Expect(2) = 8e-10
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAER+A++LKG+MRKRM FLDMD
Sbjct: 102 KRAQKAEREASDLKGTMRKRMEFLDMD 128
Score = 44.7 bits (104), Expect(2) = 8e-10
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
D EREELPPHMTR SPAEIK++ K+ +
Sbjct: 83 DAEREELPPHMTRVSPAEIKRAQKAER 109
>ref|XP_011036474.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
[Populus euphratica]
Length = 128
Score = 47.8 bits (112), Expect(2) = 1e-09
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAER+AT+LKG+MRKRM FLD+D
Sbjct: 102 KRAQKAEREATDLKGTMRKRMEFLDLD 128
Score = 43.5 bits (101), Expect(2) = 1e-09
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLEREELPPHMTR S AEIK++ K+ +
Sbjct: 83 DLEREELPPHMTRVSEAEIKRAQKAER 109
>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|222841552|gb|EEE79099.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 47.8 bits (112), Expect(2) = 1e-09
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAER+AT+LKG+MRKRM FLD+D
Sbjct: 102 KRAQKAEREATDLKGTMRKRMEFLDLD 128
Score = 43.5 bits (101), Expect(2) = 1e-09
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLEREELPPHMTR S AEIK++ K+ +
Sbjct: 83 DLEREELPPHMTRVSEAEIKRAQKAER 109
>ref|XP_010261783.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Nelumbo
nucifera] gi|720018433|ref|XP_010261785.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm1 [Nelumbo nucifera]
Length = 128
Score = 49.3 bits (116), Expect(2) = 2e-09
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
+RAQKAERDAT+LKGSMRKRM FLD+D
Sbjct: 102 RRAQKAERDATDLKGSMRKRMEFLDLD 128
Score = 41.2 bits (95), Expect(2) = 2e-09
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLEREELPPHMTR S A+I+++ K+ +
Sbjct: 83 DLEREELPPHMTRVSAADIRRAQKAER 109
>ref|XP_011012019.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
[Populus euphratica]
Length = 128
Score = 46.6 bits (109), Expect(2) = 6e-09
Identities = 21/27 (77%), Positives = 26/27 (96%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
+RAQKAER+AT+LKG+MRKRM FLD+D
Sbjct: 102 RRAQKAEREATDLKGTMRKRMEFLDLD 128
Score = 42.4 bits (98), Expect(2) = 6e-09
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLEREELPPHMTR S AEI+++ K+ +
Sbjct: 83 DLEREELPPHMTRVSEAEIRRAQKAER 109
>ref|XP_006369123.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa
x Populus deltoides] gi|550347483|gb|ERP65692.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 46.6 bits (109), Expect(2) = 6e-09
Identities = 21/27 (77%), Positives = 26/27 (96%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
+RAQKAER+AT+LKG+MRKRM FLD+D
Sbjct: 102 RRAQKAEREATDLKGTMRKRMEFLDLD 128
Score = 42.4 bits (98), Expect(2) = 6e-09
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLEREELPPHMTR S AEI+++ K+ +
Sbjct: 83 DLEREELPPHMTRVSEAEIRRAQKAER 109
>ref|XP_009622144.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
[Nicotiana tomentosiformis]
Length = 128
Score = 49.3 bits (116), Expect(2) = 1e-08
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
+RAQKAERDAT+LKG+MRKRM FLDMD
Sbjct: 102 RRAQKAERDATDLKGTMRKRMEFLDMD 128
Score = 38.9 bits (89), Expect(2) = 1e-08
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
D+++EELPPHMTR S AEI+++ K+ +
Sbjct: 83 DVDKEELPPHMTRVSEAEIRRAQKAER 109
>ref|XP_004235554.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
[Solanum lycopersicum] gi|565351988|ref|XP_006342929.1|
PREDICTED: probable U6 snRNA-associated Sm-like protein
LSm1-like [Solanum tuberosum]
Length = 128
Score = 49.3 bits (116), Expect(2) = 1e-08
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
+RAQKAERD+T+LKGSMRKRM FLDMD
Sbjct: 102 RRAQKAERDSTDLKGSMRKRMEFLDMD 128
Score = 38.9 bits (89), Expect(2) = 1e-08
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
D+++EELPPHMTR S AEI+++ K+ +
Sbjct: 83 DVDKEELPPHMTRVSEAEIRRAQKAER 109
>emb|CDO97831.1| unnamed protein product [Coffea canephora]
Length = 128
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAER+AT+LKGSMRKRM FLD+D
Sbjct: 102 KRAQKAEREATDLKGSMRKRMEFLDLD 128
Score = 38.5 bits (88), Expect(2) = 2e-08
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DL++EELPPHMTR S +IK++ K+ +
Sbjct: 83 DLDKEELPPHMTRVSSTDIKRAQKAER 109
>ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera] gi|297738539|emb|CBI27784.3| unnamed protein
product [Vitis vinifera]
Length = 128
Score = 48.1 bits (113), Expect(2) = 2e-08
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAER+AT+LKGSMRKRM FLD D
Sbjct: 102 KRAQKAEREATDLKGSMRKRMEFLDFD 128
Score = 39.3 bits (90), Expect(2) = 2e-08
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DL++EELPPHMTR AEIK++ K+ +
Sbjct: 83 DLDKEELPPHMTRVPEAEIKRAQKAER 109
>ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Citrus sinensis]
Length = 128
Score = 47.0 bits (110), Expect(2) = 2e-08
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAE+DAT LKGSMRKRM FLD D
Sbjct: 102 KRAQKAEKDATVLKGSMRKRMEFLDFD 128
Score = 40.4 bits (93), Expect(2) = 2e-08
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLE+EELP HMTR S AEIK++ K+ K
Sbjct: 83 DLEKEELPAHMTRVSTAEIKRAQKAEK 109
>ref|XP_012077075.1| PREDICTED: sm-like protein LSM1B [Jatropha curcas]
Length = 128
Score = 48.1 bits (113), Expect(2) = 2e-08
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAER+AT+LKGSMRKRM FLD D
Sbjct: 102 KRAQKAEREATDLKGSMRKRMEFLDFD 128
Score = 38.9 bits (89), Expect(2) = 2e-08
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLE+EELP HMTR S AEIK++ K+ +
Sbjct: 83 DLEKEELPSHMTRVSVAEIKRAQKAER 109
>ref|XP_009613010.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Nicotiana
tomentosiformis] gi|698451832|ref|XP_009778571.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm1
[Nicotiana sylvestris]
Length = 128
Score = 48.9 bits (115), Expect(2) = 5e-08
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
+RAQKAER+AT+LKGSMRKRM FLDMD
Sbjct: 102 RRAQKAEREATDLKGSMRKRMEFLDMD 128
Score = 37.0 bits (84), Expect(2) = 5e-08
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
D+++EELPPHMTR AEI+++ K+ +
Sbjct: 83 DVDKEELPPHMTRVPEAEIRRAQKAER 109
>ref|XP_014516657.1| PREDICTED: sm-like protein LSM1B [Vigna radiata var. radiata]
Length = 128
Score = 45.4 bits (106), Expect(2) = 5e-08
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAER+A++LKG+MRKRM FLD D
Sbjct: 102 KRAQKAEREASDLKGTMRKRMEFLDFD 128
Score = 40.4 bits (93), Expect(2) = 5e-08
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLEREELP HMTR S AEIK++ K+ +
Sbjct: 83 DLEREELPEHMTRVSTAEIKRAQKAER 109
>ref|XP_014516656.1| PREDICTED: sm-like protein LSM1B isoform X2 [Vigna radiata var.
radiata]
Length = 116
Score = 45.4 bits (106), Expect(2) = 5e-08
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAER+A++LKG+MRKRM FLD D
Sbjct: 90 KRAQKAEREASDLKGTMRKRMEFLDFD 116
Score = 40.4 bits (93), Expect(2) = 5e-08
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLEREELP HMTR S AEIK++ K+ +
Sbjct: 71 DLEREELPEHMTRVSTAEIKRAQKAER 97
>ref|XP_006598838.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Glycine max] gi|947056805|gb|KRH06211.1| hypothetical
protein GLYMA_16G009500 [Glycine max]
Length = 95
Score = 45.4 bits (106), Expect(2) = 5e-08
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAER+A++LKG+MRKRM FLD D
Sbjct: 69 KRAQKAEREASDLKGTMRKRMEFLDFD 95
Score = 40.4 bits (93), Expect(2) = 5e-08
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLEREELP HMTR S AEIK++ K+ +
Sbjct: 50 DLEREELPEHMTRVSTAEIKRAQKAER 76
>ref|XP_007135420.1| hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
gi|561008465|gb|ESW07414.1| hypothetical protein
PHAVU_010G127900g [Phaseolus vulgaris]
Length = 128
Score = 45.4 bits (106), Expect(2) = 5e-08
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAER+A++LKG+MRKRM FLD D
Sbjct: 102 KRAQKAEREASDLKGTMRKRMEFLDFD 128
Score = 40.4 bits (93), Expect(2) = 5e-08
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLEREELP HMTR S AEIK++ K+ +
Sbjct: 83 DLEREELPEHMTRVSTAEIKRAQKAER 109
>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|593266482|ref|XP_007135419.1| hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris]
gi|951036571|ref|XP_014516654.1| PREDICTED: sm-like
protein LSM1B isoform X1 [Vigna radiata var. radiata]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
gi|561008464|gb|ESW07413.1| hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris]
gi|734313531|gb|KHN01428.1| U6 snRNA-associated Sm-like
protein LSm1 [Glycine soja] gi|734418459|gb|KHN39613.1|
U6 snRNA-associated Sm-like protein LSm1 [Glycine soja]
gi|947099143|gb|KRH47635.1| hypothetical protein
GLYMA_07G040900 [Glycine max]
Length = 128
Score = 45.4 bits (106), Expect(2) = 5e-08
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAER+A++LKG+MRKRM FLD D
Sbjct: 102 KRAQKAEREASDLKGTMRKRMEFLDFD 128
Score = 40.4 bits (93), Expect(2) = 5e-08
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLEREELP HMTR S AEIK++ K+ +
Sbjct: 83 DLEREELPEHMTRVSTAEIKRAQKAER 109
>gb|KJB07332.1| hypothetical protein B456_001G016100 [Gossypium raimondii]
Length = 93
Score = 48.1 bits (113), Expect(2) = 8e-08
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAER+AT+LKGSMRKRM FLD D
Sbjct: 67 KRAQKAEREATDLKGSMRKRMEFLDFD 93
Score = 37.0 bits (84), Expect(2) = 8e-08
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLE+EELP HMT S AEIK++ K+ +
Sbjct: 48 DLEKEELPSHMTAVSAAEIKRAQKAER 74
>ref|XP_012481954.1| PREDICTED: sm-like protein LSM1B [Gossypium raimondii]
gi|728849887|gb|KHG29330.1| U6 snRNA-associated Sm-like
protein LSm1 [Gossypium arboreum]
gi|763739832|gb|KJB07331.1| hypothetical protein
B456_001G016100 [Gossypium raimondii]
Length = 128
Score = 48.1 bits (113), Expect(2) = 8e-08
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -1
Query: 780 KRAQKAERDATELKGSMRKRM*FLDMD 700
KRAQKAER+AT+LKGSMRKRM FLD D
Sbjct: 102 KRAQKAEREATDLKGSMRKRMEFLDFD 128
Score = 37.0 bits (84), Expect(2) = 8e-08
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -3
Query: 838 DLEREELPPHMTRCSPAEIKKSAKSRK 758
DLE+EELP HMT S AEIK++ K+ +
Sbjct: 83 DLEKEELPSHMTAVSAAEIKRAQKAER 109