BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00036119
         (526 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007031160.1| Tetratricopeptide repeat-like superfamily pr...   139   6e-31
ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily pr...   139   6e-31
ref|XP_007031162.1| Tetratricopeptide repeat (TPR)-like superfam...   135   2e-29
ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfam...   135   2e-29
ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfam...   135   2e-29
ref|XP_010267984.1| PREDICTED: RNA polymerase II-associated prot...   130   4e-28
ref|XP_010267983.1| PREDICTED: RNA polymerase II-associated prot...   130   4e-28
ref|XP_011038929.1| PREDICTED: RNA polymerase II-associated prot...   125   9e-27
ref|XP_011038928.1| PREDICTED: RNA polymerase II-associated prot...   125   9e-27
ref|XP_011038927.1| PREDICTED: RNA polymerase II-associated prot...   125   9e-27
ref|XP_011038926.1| PREDICTED: RNA polymerase II-associated prot...   125   9e-27
ref|XP_011038925.1| PREDICTED: RNA polymerase II-associated prot...   125   9e-27
ref|XP_011038924.1| PREDICTED: RNA polymerase II-associated prot...   125   9e-27
ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Popu...   125   9e-27
ref|XP_012434281.1| PREDICTED: RNA polymerase II-associated prot...   125   1e-26
ref|XP_012434282.1| PREDICTED: RNA polymerase II-associated prot...   125   1e-26
gb|KJB45455.1| hypothetical protein B456_007G306700 [Gossypium r...   125   1e-26
ref|XP_006382392.1| hypothetical protein POPTR_0005s01710g [Popu...   124   3e-26
gb|KHG26705.1| RNA polymerase II-associated 3 [Gossypium arboreum]    124   4e-26
ref|XP_009767331.1| PREDICTED: RNA polymerase II-associated prot...   124   4e-26

>ref|XP_007031160.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           3, partial [Theobroma cacao] gi|508719765|gb|EOY11662.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 3, partial [Theobroma cacao]
          Length = 412

 Score =  139 bits (351), Expect = 6e-31
 Identities = 93/197 (47%), Positives = 112/197 (56%), Gaps = 23/197 (11%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIED+EFALRLEP+NQEIKKQHA+ K LY+KE+L+KAS    R S QEA+ 
Sbjct: 138 RKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQE 196

Query: 344 VGVTEI---------------QTGHTKVGG---KPSDAGSGSKTARISVASGNISSKPQS 219
           VG +E                +TG   V G   K S+     K  + SV S  I  +   
Sbjct: 197 VGKSETKENGLGMHSASNSTQRTGVATVQGYQTKVSEYDKQKKPEKGSVTSEGIGDRNTL 256

Query: 218 YGPLEGGKTLKVNPQGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPPKTA 54
            G  + G  L     G++S+ K     K E K +VQEL            AKN+SPP TA
Sbjct: 257 AGSRKDGTQLDSGIVGLESIKKNNRTRKPELKASVQELASLAATRAMAEAAKNISPPNTA 316

Query: 53  YQFEVSWKGLSGDPALQ 3
           YQFEVSW+ LSGD ALQ
Sbjct: 317 YQFEVSWRALSGDRALQ 333


>ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           1 [Theobroma cacao] gi|508719763|gb|EOY11660.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 468

 Score =  139 bits (351), Expect = 6e-31
 Identities = 93/197 (47%), Positives = 112/197 (56%), Gaps = 23/197 (11%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIED+EFALRLEP+NQEIKKQHA+ K LY+KE+L+KAS    R S QEA+ 
Sbjct: 170 RKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQE 228

Query: 344 VGVTEI---------------QTGHTKVGG---KPSDAGSGSKTARISVASGNISSKPQS 219
           VG +E                +TG   V G   K S+     K  + SV S  I  +   
Sbjct: 229 VGKSETKENGLGMHSASNSTQRTGVATVQGYQTKVSEYDKQKKPEKGSVTSEGIGDRNTL 288

Query: 218 YGPLEGGKTLKVNPQGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPPKTA 54
            G  + G  L     G++S+ K     K E K +VQEL            AKN+SPP TA
Sbjct: 289 AGSRKDGTQLDSGIVGLESIKKNNRTRKPELKASVQELASLAATRAMAEAAKNISPPNTA 348

Query: 53  YQFEVSWKGLSGDPALQ 3
           YQFEVSW+ LSGD ALQ
Sbjct: 349 YQFEVSWRALSGDRALQ 365


>ref|XP_007031162.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 5 [Theobroma cacao] gi|508719767|gb|EOY11664.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 5 [Theobroma cacao]
          Length = 389

 Score =  135 bits (339), Expect = 2e-29
 Identities = 89/174 (51%), Positives = 106/174 (60%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIED+EFALRLEP+NQEIKKQHA+ K LY+KE+L+KAS    R S QEA+ 
Sbjct: 138 RKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQE 196

Query: 344 VGVTEIQTGHTKVGGKPSDAGSGSKTARISVASGNISSKPQSYGPLEGGKTLKVNPQGVQ 165
           VG +E     TK  G    + S S T R  VA+            ++G +T K N     
Sbjct: 197 VGKSE-----TKENGLGMHSASNS-TQRTGVAT------------VQGYQTKKNN----- 233

Query: 164 SLDKKREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
              +K E K +VQEL            AKN+SPP TAYQFEVSW+ LSGD ALQ
Sbjct: 234 -RTRKPELKASVQELASLAATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQ 286


>ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 4 [Theobroma cacao] gi|508719766|gb|EOY11663.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 4 [Theobroma cacao]
          Length = 421

 Score =  135 bits (339), Expect = 2e-29
 Identities = 89/174 (51%), Positives = 106/174 (60%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIED+EFALRLEP+NQEIKKQHA+ K LY+KE+L+KAS    R S QEA+ 
Sbjct: 170 RKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQE 228

Query: 344 VGVTEIQTGHTKVGGKPSDAGSGSKTARISVASGNISSKPQSYGPLEGGKTLKVNPQGVQ 165
           VG +E     TK  G    + S S T R  VA+            ++G +T K N     
Sbjct: 229 VGKSE-----TKENGLGMHSASNS-TQRTGVAT------------VQGYQTKKNN----- 265

Query: 164 SLDKKREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
              +K E K +VQEL            AKN+SPP TAYQFEVSW+ LSGD ALQ
Sbjct: 266 -RTRKPELKASVQELASLAATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQ 318


>ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 2 [Theobroma cacao] gi|508719764|gb|EOY11661.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 2 [Theobroma cacao]
          Length = 422

 Score =  135 bits (339), Expect = 2e-29
 Identities = 89/174 (51%), Positives = 106/174 (60%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIED+EFALRLEP+NQEIKKQHA+ K LY+KE+L+KAS    R S QEA+ 
Sbjct: 171 RKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQE 229

Query: 344 VGVTEIQTGHTKVGGKPSDAGSGSKTARISVASGNISSKPQSYGPLEGGKTLKVNPQGVQ 165
           VG +E     TK  G    + S S T R  VA+            ++G +T K N     
Sbjct: 230 VGKSE-----TKENGLGMHSASNS-TQRTGVAT------------VQGYQTKKNN----- 266

Query: 164 SLDKKREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
              +K E K +VQEL            AKN+SPP TAYQFEVSW+ LSGD ALQ
Sbjct: 267 -RTRKPELKASVQELASLAATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQ 319


>ref|XP_010267984.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
           [Nelumbo nucifera]
          Length = 484

 Score =  130 bits (327), Expect = 4e-28
 Identities = 83/177 (46%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLK +IED+EFALRLEP+NQE+KKQ+A+ K LY KE+LKKAS  A R++ Q    
Sbjct: 207 RKELGKLKAAIEDAEFALRLEPNNQELKKQYAESKALYDKEILKKASGIA-RNAIQGETA 265

Query: 344 VGVTEIQTGHTKVGGKPSDAGSGSKTARISVASGNISSKPQSYGPLEGGKTLKVNP---Q 174
             V  ++    K   KPS      K+   +   G  S   +S G  E   TLK +    +
Sbjct: 266 AQVDRMKGTDGKFPSKPSIIVQEIKSK--TTVGGTRSWIKESDGSQEDA-TLKSSADTFK 322

Query: 173 GVQSLDKKREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
           G  ++DK+ E KT+VQEL             KN++PPK+AY+FEVSW+GLSGD ALQ
Sbjct: 323 GSHAVDKREELKTSVQELASRAASRAMAEAVKNITPPKSAYEFEVSWRGLSGDRALQ 379


>ref|XP_010267983.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
           [Nelumbo nucifera]
          Length = 489

 Score =  130 bits (327), Expect = 4e-28
 Identities = 83/177 (46%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLK +IED+EFALRLEP+NQE+KKQ+A+ K LY KE+LKKAS  A R++ Q    
Sbjct: 212 RKELGKLKAAIEDAEFALRLEPNNQELKKQYAESKALYDKEILKKASGIA-RNAIQGETA 270

Query: 344 VGVTEIQTGHTKVGGKPSDAGSGSKTARISVASGNISSKPQSYGPLEGGKTLKVNP---Q 174
             V  ++    K   KPS      K+   +   G  S   +S G  E   TLK +    +
Sbjct: 271 AQVDRMKGTDGKFPSKPSIIVQEIKSK--TTVGGTRSWIKESDGSQEDA-TLKSSADTFK 327

Query: 173 GVQSLDKKREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
           G  ++DK+ E KT+VQEL             KN++PPK+AY+FEVSW+GLSGD ALQ
Sbjct: 328 GSHAVDKREELKTSVQELASRAASRAMAEAVKNITPPKSAYEFEVSWRGLSGDRALQ 384


>ref|XP_011038929.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X6
           [Populus euphratica]
          Length = 462

 Score =  125 bits (315), Expect = 9e-27
 Identities = 86/200 (43%), Positives = 109/200 (54%), Gaps = 26/200 (13%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIEDSEFAL+LEP NQEIKKQ+A+VK LY+KE+L+KAS  A R S Q  ++
Sbjct: 161 RKELGKLKESIEDSEFALKLEPINQEIKKQYAEVKSLYEKEILQKAS-GALRSSLQGTQK 219

Query: 344 VGVTE------------IQTGHTKVGGKPSD---AGSGSKTARISVASGNISSKPQSYGP 210
            G +E            I T +T V     D      G+   + SV    + +K    G 
Sbjct: 220 GGRSEASVNGHAVHPVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGS 279

Query: 209 LEGGKTLKVNP------QGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPP 63
              G     +P        V S+ K     ++E KT+V EL            AKN++PP
Sbjct: 280 KSDGHVGNDSPANATLSSSVDSVQKNNRTQRQELKTSVMELASQAASRAMAEAAKNITPP 339

Query: 62  KTAYQFEVSWKGLSGDPALQ 3
            +AYQFEVSW+G SGD ALQ
Sbjct: 340 NSAYQFEVSWRGFSGDRALQ 359


>ref|XP_011038928.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X5
           [Populus euphratica]
          Length = 462

 Score =  125 bits (315), Expect = 9e-27
 Identities = 86/200 (43%), Positives = 109/200 (54%), Gaps = 26/200 (13%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIEDSEFAL+LEP NQEIKKQ+A+VK LY+KE+L+KAS  A R S Q  ++
Sbjct: 161 RKELGKLKESIEDSEFALKLEPINQEIKKQYAEVKSLYEKEILQKAS-GALRSSLQGTQK 219

Query: 344 VGVTE------------IQTGHTKVGGKPSD---AGSGSKTARISVASGNISSKPQSYGP 210
            G +E            I T +T V     D      G+   + SV    + +K    G 
Sbjct: 220 GGRSEASVNGHAVHPVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGS 279

Query: 209 LEGGKTLKVNP------QGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPP 63
              G     +P        V S+ K     ++E KT+V EL            AKN++PP
Sbjct: 280 KSDGHVGNDSPANATLSSSVDSVQKNNRTQRQELKTSVMELASQAASRAMAEAAKNITPP 339

Query: 62  KTAYQFEVSWKGLSGDPALQ 3
            +AYQFEVSW+G SGD ALQ
Sbjct: 340 NSAYQFEVSWRGFSGDRALQ 359


>ref|XP_011038927.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X4
           [Populus euphratica]
          Length = 463

 Score =  125 bits (315), Expect = 9e-27
 Identities = 86/200 (43%), Positives = 109/200 (54%), Gaps = 26/200 (13%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIEDSEFAL+LEP NQEIKKQ+A+VK LY+KE+L+KAS  A R S Q  ++
Sbjct: 162 RKELGKLKESIEDSEFALKLEPINQEIKKQYAEVKSLYEKEILQKAS-GALRSSLQGTQK 220

Query: 344 VGVTE------------IQTGHTKVGGKPSD---AGSGSKTARISVASGNISSKPQSYGP 210
            G +E            I T +T V     D      G+   + SV    + +K    G 
Sbjct: 221 GGRSEASVNGHAVHPVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGS 280

Query: 209 LEGGKTLKVNP------QGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPP 63
              G     +P        V S+ K     ++E KT+V EL            AKN++PP
Sbjct: 281 KSDGHVGNDSPANATLSSSVDSVQKNNRTQRQELKTSVMELASQAASRAMAEAAKNITPP 340

Query: 62  KTAYQFEVSWKGLSGDPALQ 3
            +AYQFEVSW+G SGD ALQ
Sbjct: 341 NSAYQFEVSWRGFSGDRALQ 360


>ref|XP_011038926.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X3
           [Populus euphratica]
          Length = 472

 Score =  125 bits (315), Expect = 9e-27
 Identities = 86/200 (43%), Positives = 109/200 (54%), Gaps = 26/200 (13%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIEDSEFAL+LEP NQEIKKQ+A+VK LY+KE+L+KAS  A R S Q  ++
Sbjct: 171 RKELGKLKESIEDSEFALKLEPINQEIKKQYAEVKSLYEKEILQKAS-GALRSSLQGTQK 229

Query: 344 VGVTE------------IQTGHTKVGGKPSD---AGSGSKTARISVASGNISSKPQSYGP 210
            G +E            I T +T V     D      G+   + SV    + +K    G 
Sbjct: 230 GGRSEASVNGHAVHPVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGS 289

Query: 209 LEGGKTLKVNP------QGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPP 63
              G     +P        V S+ K     ++E KT+V EL            AKN++PP
Sbjct: 290 KSDGHVGNDSPANATLSSSVDSVQKNNRTQRQELKTSVMELASQAASRAMAEAAKNITPP 349

Query: 62  KTAYQFEVSWKGLSGDPALQ 3
            +AYQFEVSW+G SGD ALQ
Sbjct: 350 NSAYQFEVSWRGFSGDRALQ 369


>ref|XP_011038925.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
           [Populus euphratica]
          Length = 472

 Score =  125 bits (315), Expect = 9e-27
 Identities = 86/200 (43%), Positives = 109/200 (54%), Gaps = 26/200 (13%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIEDSEFAL+LEP NQEIKKQ+A+VK LY+KE+L+KAS  A R S Q  ++
Sbjct: 171 RKELGKLKESIEDSEFALKLEPINQEIKKQYAEVKSLYEKEILQKAS-GALRSSLQGTQK 229

Query: 344 VGVTE------------IQTGHTKVGGKPSD---AGSGSKTARISVASGNISSKPQSYGP 210
            G +E            I T +T V     D      G+   + SV    + +K    G 
Sbjct: 230 GGRSEASVNGHAVHPVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGS 289

Query: 209 LEGGKTLKVNP------QGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPP 63
              G     +P        V S+ K     ++E KT+V EL            AKN++PP
Sbjct: 290 KSDGHVGNDSPANATLSSSVDSVQKNNRTQRQELKTSVMELASQAASRAMAEAAKNITPP 349

Query: 62  KTAYQFEVSWKGLSGDPALQ 3
            +AYQFEVSW+G SGD ALQ
Sbjct: 350 NSAYQFEVSWRGFSGDRALQ 369


>ref|XP_011038924.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
           [Populus euphratica]
          Length = 473

 Score =  125 bits (315), Expect = 9e-27
 Identities = 86/200 (43%), Positives = 109/200 (54%), Gaps = 26/200 (13%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIEDSEFAL+LEP NQEIKKQ+A+VK LY+KE+L+KAS  A R S Q  ++
Sbjct: 172 RKELGKLKESIEDSEFALKLEPINQEIKKQYAEVKSLYEKEILQKAS-GALRSSLQGTQK 230

Query: 344 VGVTE------------IQTGHTKVGGKPSD---AGSGSKTARISVASGNISSKPQSYGP 210
            G +E            I T +T V     D      G+   + SV    + +K    G 
Sbjct: 231 GGRSEASVNGHAVHPVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGS 290

Query: 209 LEGGKTLKVNP------QGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPP 63
              G     +P        V S+ K     ++E KT+V EL            AKN++PP
Sbjct: 291 KSDGHVGNDSPANATLSSSVDSVQKNNRTQRQELKTSVMELASQAASRAMAEAAKNITPP 350

Query: 62  KTAYQFEVSWKGLSGDPALQ 3
            +AYQFEVSW+G SGD ALQ
Sbjct: 351 NSAYQFEVSWRGFSGDRALQ 370


>ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Populus trichocarpa]
           gi|550337753|gb|ERP60190.1| hypothetical protein
           POPTR_0005s01710g [Populus trichocarpa]
          Length = 402

 Score =  125 bits (315), Expect = 9e-27
 Identities = 84/195 (43%), Positives = 110/195 (56%), Gaps = 21/195 (10%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIEDSEFAL+LEP+NQEIKKQ+A+VK LY+KE+L+KAS    R S Q  ++
Sbjct: 172 RKELGKLKESIEDSEFALKLEPNNQEIKKQYAEVKSLYEKEILQKAS-GTLRSSLQGTQQ 230

Query: 344 VGVTE------------IQTGHTKVGGKPSD---AGSGSKTARISVASGNISSKPQSYGP 210
            G +E            I T  T V     D      G+   + SV    + ++ +S G 
Sbjct: 231 GGRSEASVNGHAVHPVSIATQKTGVSASKKDNTKENDGNNLVKKSVHVKELRNRSKSDGH 290

Query: 209 LEGGKTLKVNP-QGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQ 48
           +         P   V+S+ K     ++E KT+V EL            AKN++PP +AYQ
Sbjct: 291 VGNDSPANATPSSSVESVQKNNRTRRQELKTSVIELASQAASRAMAEAAKNITPPNSAYQ 350

Query: 47  FEVSWKGLSGDPALQ 3
           FEVSW+G SGD ALQ
Sbjct: 351 FEVSWQGFSGDRALQ 365


>ref|XP_012434281.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
           [Gossypium raimondii] gi|763778334|gb|KJB45457.1|
           hypothetical protein B456_007G306700 [Gossypium
           raimondii]
          Length = 472

 Score =  125 bits (314), Expect = 1e-26
 Identities = 81/200 (40%), Positives = 109/200 (54%), Gaps = 26/200 (13%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASA------------ 381
           RKELGKLKESIED+EF LRLEP+NQ++KKQHA+ K LY+KE+L+KAS             
Sbjct: 174 RKELGKLKESIEDAEFGLRLEPNNQDMKKQHAEFKALYEKEILQKASGVIKKSMQGAQEV 233

Query: 380 --AATRDS-------TQEAKRVGVTEIQTGHTKVGGKPSDAGSGSKTARISVASGNISSK 228
             +AT D+       +   +R G+  +Q   TKV    S+     K  + SV    I  +
Sbjct: 234 GKSATIDNGLGMHTMSDSTQRKGIAAVQGSQTKV----SECDKQKKPEKGSVTLEEIGKR 289

Query: 227 PQSYGPLEGGKTLKVNPQGVQSL-----DKKREQKTAVQELXXXXXXXXXXXXAKNLSPP 63
             S G    G  L     G +++      +K+E K +VQ+L            AK++SPP
Sbjct: 290 NTSAGNTADGTQLDAEIAGPENIKRDTKSRKQELKASVQDLASRAASRAMAEAAKSISPP 349

Query: 62  KTAYQFEVSWKGLSGDPALQ 3
            TAYQFEVSW+ LSGD +LQ
Sbjct: 350 STAYQFEVSWRALSGDRSLQ 369


>ref|XP_012434282.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
           [Gossypium raimondii] gi|763778333|gb|KJB45456.1|
           hypothetical protein B456_007G306700 [Gossypium
           raimondii]
          Length = 462

 Score =  125 bits (314), Expect = 1e-26
 Identities = 81/200 (40%), Positives = 109/200 (54%), Gaps = 26/200 (13%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASA------------ 381
           RKELGKLKESIED+EF LRLEP+NQ++KKQHA+ K LY+KE+L+KAS             
Sbjct: 164 RKELGKLKESIEDAEFGLRLEPNNQDMKKQHAEFKALYEKEILQKASGVIKKSMQGAQEV 223

Query: 380 --AATRDS-------TQEAKRVGVTEIQTGHTKVGGKPSDAGSGSKTARISVASGNISSK 228
             +AT D+       +   +R G+  +Q   TKV    S+     K  + SV    I  +
Sbjct: 224 GKSATIDNGLGMHTMSDSTQRKGIAAVQGSQTKV----SECDKQKKPEKGSVTLEEIGKR 279

Query: 227 PQSYGPLEGGKTLKVNPQGVQSL-----DKKREQKTAVQELXXXXXXXXXXXXAKNLSPP 63
             S G    G  L     G +++      +K+E K +VQ+L            AK++SPP
Sbjct: 280 NTSAGNTADGTQLDAEIAGPENIKRDTKSRKQELKASVQDLASRAASRAMAEAAKSISPP 339

Query: 62  KTAYQFEVSWKGLSGDPALQ 3
            TAYQFEVSW+ LSGD +LQ
Sbjct: 340 STAYQFEVSWRALSGDRSLQ 359


>gb|KJB45455.1| hypothetical protein B456_007G306700 [Gossypium raimondii]
          Length = 379

 Score =  125 bits (314), Expect = 1e-26
 Identities = 81/200 (40%), Positives = 109/200 (54%), Gaps = 26/200 (13%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASA------------ 381
           RKELGKLKESIED+EF LRLEP+NQ++KKQHA+ K LY+KE+L+KAS             
Sbjct: 81  RKELGKLKESIEDAEFGLRLEPNNQDMKKQHAEFKALYEKEILQKASGVIKKSMQGAQEV 140

Query: 380 --AATRDS-------TQEAKRVGVTEIQTGHTKVGGKPSDAGSGSKTARISVASGNISSK 228
             +AT D+       +   +R G+  +Q   TKV    S+     K  + SV    I  +
Sbjct: 141 GKSATIDNGLGMHTMSDSTQRKGIAAVQGSQTKV----SECDKQKKPEKGSVTLEEIGKR 196

Query: 227 PQSYGPLEGGKTLKVNPQGVQSL-----DKKREQKTAVQELXXXXXXXXXXXXAKNLSPP 63
             S G    G  L     G +++      +K+E K +VQ+L            AK++SPP
Sbjct: 197 NTSAGNTADGTQLDAEIAGPENIKRDTKSRKQELKASVQDLASRAASRAMAEAAKSISPP 256

Query: 62  KTAYQFEVSWKGLSGDPALQ 3
            TAYQFEVSW+ LSGD +LQ
Sbjct: 257 STAYQFEVSWRALSGDRSLQ 276


>ref|XP_006382392.1| hypothetical protein POPTR_0005s01710g [Populus trichocarpa]
           gi|550337752|gb|ERP60189.1| hypothetical protein
           POPTR_0005s01710g [Populus trichocarpa]
          Length = 462

 Score =  124 bits (311), Expect = 3e-26
 Identities = 84/199 (42%), Positives = 110/199 (55%), Gaps = 25/199 (12%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIEDSEFAL+LEP+NQEIKKQ+A+VK LY+KE+L+KAS    R S Q  ++
Sbjct: 162 RKELGKLKESIEDSEFALKLEPNNQEIKKQYAEVKSLYEKEILQKAS-GTLRSSLQGTQQ 220

Query: 344 VGVTE------------IQTGHTKVGGKPSD-------AGSGSKTARISVASGNISSKPQ 222
            G +E            I T  T V     D          G+   + SV    + ++ +
Sbjct: 221 GGRSEASVNGHAVHPVSIATQKTGVSASKKDNTKLEQEENDGNNLVKKSVHVKELRNRSK 280

Query: 221 SYGPLEGGKTLKVNP-QGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPPK 60
           S G +         P   V+S+ K     ++E KT+V EL            AKN++PP 
Sbjct: 281 SDGHVGNDSPANATPSSSVESVQKNNRTRRQELKTSVIELASQAASRAMAEAAKNITPPN 340

Query: 59  TAYQFEVSWKGLSGDPALQ 3
           +AYQFEVSW+G SGD ALQ
Sbjct: 341 SAYQFEVSWQGFSGDRALQ 359


>gb|KHG26705.1| RNA polymerase II-associated 3 [Gossypium arboreum]
          Length = 472

 Score =  124 bits (310), Expect = 4e-26
 Identities = 82/200 (41%), Positives = 108/200 (54%), Gaps = 26/200 (13%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASA------------ 381
           RKELGKLKESIED+EF LRLEP++Q++KKQHA+ K LY+KE+L+KAS             
Sbjct: 174 RKELGKLKESIEDAEFGLRLEPNSQDMKKQHAEFKALYEKEILQKASGVIKKSMQGAQEV 233

Query: 380 --AATRDS-------TQEAKRVGVTEIQTGHTKVGGKPSDAGSGSKTARISVASGNISSK 228
             +AT D+       +   +R G+   Q   TKV    S+     K  + SV    I  +
Sbjct: 234 GKSATIDNGLGMHTMSDSTQRKGIAAAQGSQTKV----SEIDKQKKPEKGSVTLEEIGKR 289

Query: 227 PQSYGPLEGGKTLKVNPQGVQSL-----DKKREQKTAVQELXXXXXXXXXXXXAKNLSPP 63
             S G    G  L V   G +++      +K+E K +VQ+L            AKN+SPP
Sbjct: 290 NTSAGNTADGTQLDVEIAGPENIKRNTKTRKQELKASVQDLAFRAASRAMAEAAKNISPP 349

Query: 62  KTAYQFEVSWKGLSGDPALQ 3
            TAYQFEVSW+ LSGD  LQ
Sbjct: 350 NTAYQFEVSWRALSGDRLLQ 369


>ref|XP_009767331.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X5
           [Nicotiana sylvestris]
          Length = 449

 Score =  124 bits (310), Expect = 4e-26
 Identities = 82/189 (43%), Positives = 99/189 (52%), Gaps = 15/189 (7%)
 Frame = -3

Query: 524 RKELGKLKESIEDSEFALRLEPDNQEIKKQHADVKDLYKKEVLKKASAAATRDSTQEAKR 345
           RKELGKLKESIED+EFA RLEP NQEIKKQ+ +VK LY+KE+LK+ S  AT  S Q A+ 
Sbjct: 169 RKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVS-GATGVSAQGAQN 227

Query: 344 VGVTEIQTGHTKVGGKPSDAGSGSKTARISVASGNISSKP---------------QSYGP 210
            G T       K G      GS  K A +       SS+                 S G 
Sbjct: 228 TGKT------NKTGPVIQSVGSSQKVAEVRKIPAKESSRDVPGTAMEVEDTHMQINSKGS 281

Query: 209 LEGGKTLKVNPQGVQSLDKKREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVSWK 30
                   +NP      + K+E K +VQEL            AKN++PP +AYQFEVSW+
Sbjct: 282 DASATVPTLNPAKRPHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNSAYQFEVSWR 341

Query: 29  GLSGDPALQ 3
           GLSGD  LQ
Sbjct: 342 GLSGDRDLQ 350