BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00036118
         (1068 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010267984.1| PREDICTED: RNA polymerase II-associated prot...   314   7e-83
ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily pr...   313   1e-82
ref|XP_010267983.1| PREDICTED: RNA polymerase II-associated prot...   312   3e-82
ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Popu...   311   4e-82
ref|XP_008388471.1| PREDICTED: RNA polymerase II-associated prot...   309   2e-81
ref|XP_011038926.1| PREDICTED: RNA polymerase II-associated prot...   309   3e-81
ref|XP_009373287.1| PREDICTED: RNA polymerase II-associated prot...   309   3e-81
ref|XP_011038925.1| PREDICTED: RNA polymerase II-associated prot...   308   4e-81
ref|XP_011023786.1| PREDICTED: RNA polymerase II-associated prot...   308   5e-81
ref|XP_008246007.1| PREDICTED: RNA polymerase II-associated prot...   308   5e-81
ref|XP_011038924.1| PREDICTED: RNA polymerase II-associated prot...   307   1e-80
ref|XP_011023785.1| PREDICTED: RNA polymerase II-associated prot...   307   1e-80
ref|XP_009373288.1| PREDICTED: RNA polymerase II-associated prot...   306   2e-80
ref|XP_008388472.1| PREDICTED: RNA polymerase II-associated prot...   306   2e-80
ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated prot...   306   2e-80
gb|KDO81669.1| hypothetical protein CISIN_1g013696mg [Citrus sin...   305   3e-80
gb|KDO81667.1| hypothetical protein CISIN_1g013696mg [Citrus sin...   305   3e-80
gb|KHG26705.1| RNA polymerase II-associated 3 [Gossypium arboreum]    305   4e-80
ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfam...   305   4e-80
ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citr...   305   5e-80

>ref|XP_010267984.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Nelumbo
            nucifera]
          Length = 484

 Score =  314 bits (805), Expect = 7e-83
 Identities = 186/382 (48%), Positives = 232/382 (60%), Gaps = 48/382 (12%)
 Frame = -2

Query: 1004 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQ-------------------- 885
            MARVP K++RD+ ++FQG L+DLQ W           +AQ                    
Sbjct: 1    MARVPKKNSRDEGMNFQGFLNDLQDWELSLKEKDKKLRAQTSEETKALPTQRVGMKNASQ 60

Query: 884  -SHSPGVSEK-------------------------RVSMTSSNQFGYSRNSDPITRISNS 783
             S  PG+  +                           S  S  +F +SRN D + ++S+S
Sbjct: 61   LSSEPGIGGRGRQLKEQNTAAVGRDKGPGGESPSVHYSRNSKYRFDFSRNFDAVNKLSSS 120

Query: 782  LLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMAYLRIKRFE 603
             L+ E+SPDA S+KELGNEYFKQKKFNEAIDCYSRSIAL P+AVAYANRAMAYL+IKRFE
Sbjct: 121  YLNAEDSPDATSEKELGNEYFKQKKFNEAIDCYSRSIALMPTAVAYANRAMAYLKIKRFE 180

Query: 602  EAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEPENQEVKKQHADV 423
            EAE+DCTEALNLDDRYIKAYSRRATARKEL KLK +IED+EFALRLEP NQE+KKQ+A+ 
Sbjct: 181  EAEDDCTEALNLDDRYIKAYSRRATARKELGKLKAAIEDAEFALRLEPNNQELKKQYAES 240

Query: 422  KGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHTKVGGKPSDVGSGSKTARISVASG 243
            K LY KE+LKKAS   AR++ Q      V  ++    K   KPS +    K+   +   G
Sbjct: 241  KALYDKEILKKAS-GIARNAIQGETAAQVDRMKGTDGKFPSKPSIIVQEIKSK--TTVGG 297

Query: 242  NISSKPQSYGPSEGG--KALKVNPQGVQSLDKKREQKTAVQELXXXXXXXXXXXXAKNLS 69
              S   +S G  E    K+     +G  ++DK+ E KT+VQEL             KN++
Sbjct: 298  TRSWIKESDGSQEDATLKSSADTFKGSHAVDKREELKTSVQELASRAASRAMAEAVKNIT 357

Query: 68   PPKTAYQFEVSWKGLSGDPALQ 3
            PPK+AY+FEVSW+GLSGD ALQ
Sbjct: 358  PPKSAYEFEVSWRGLSGDRALQ 379


>ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily protein, putative isoform 1
            [Theobroma cacao] gi|508719763|gb|EOY11660.1|
            Tetratricopeptide repeat-like superfamily protein,
            putative isoform 1 [Theobroma cacao]
          Length = 468

 Score =  313 bits (803), Expect = 1e-82
 Identities = 189/364 (51%), Positives = 228/364 (62%), Gaps = 35/364 (9%)
 Frame = -2

Query: 989  NKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPG--VSEKR----------VSM 846
            +KH+RDQ LDFQG L++LQ W           K+Q+       +EK            S 
Sbjct: 3    SKHSRDQALDFQGFLNNLQDWELSLKEKDKIMKSQASDKEQLTNEKGRPTGKSSLIDSST 62

Query: 845  TSSNQFGYSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRSIAL 666
            TSS Q+ Y +N D    +S+S + +E  PDA S+KELGNEYFKQKKF EAIDCYSRSI L
Sbjct: 63   TSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIGL 122

Query: 665  SPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIED 486
            SP+AVA+ANRAMAYL+IK+F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIED
Sbjct: 123  SPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 182

Query: 485  SEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEI------- 327
            +EFALRLEP NQE+KKQHA+ K LY+KE+L+KAS    R S QEA+ VG +E        
Sbjct: 183  TEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQEVGKSETKENGLGM 241

Query: 326  --------QTGHTKVGG---KPSDVGSGSKTARISVASGNISSKPQSYGPSEGGKALKVN 180
                    +TG   V G   K S+     K  + SV S  I  +    G  + G  L   
Sbjct: 242  HSASNSTQRTGVATVQGYQTKVSEYDKQKKPEKGSVTSEGIGDRNTLAGSRKDGTQLDSG 301

Query: 179  PQGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGD 15
              G++S+ K     K E K +VQEL            AKN+SPP TAYQFEVSW+ LSGD
Sbjct: 302  IVGLESIKKNNRTRKPELKASVQELASLAATRAMAEAAKNISPPNTAYQFEVSWRALSGD 361

Query: 14   PALQ 3
             ALQ
Sbjct: 362  RALQ 365


>ref|XP_010267983.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Nelumbo
            nucifera]
          Length = 489

 Score =  312 bits (800), Expect = 3e-82
 Identities = 186/387 (48%), Positives = 232/387 (59%), Gaps = 53/387 (13%)
 Frame = -2

Query: 1004 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQ-------------------- 885
            MARVP K++RD+ ++FQG L+DLQ W           +AQ                    
Sbjct: 1    MARVPKKNSRDEGMNFQGFLNDLQDWELSLKEKDKKLRAQTSEETKALPTQRVGMKNASQ 60

Query: 884  -SHSPGVSEK------------------------------RVSMTSSNQFGYSRNSDPIT 798
             S  PG+  +                                S  S  +F +SRN D + 
Sbjct: 61   LSSEPGIGGRGRQLKEQVFSPQNTAAVGRDKGPGGESPSVHYSRNSKYRFDFSRNFDAVN 120

Query: 797  RISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMAYLR 618
            ++S+S L+ E+SPDA S+KELGNEYFKQKKFNEAIDCYSRSIAL P+AVAYANRAMAYL+
Sbjct: 121  KLSSSYLNAEDSPDATSEKELGNEYFKQKKFNEAIDCYSRSIALMPTAVAYANRAMAYLK 180

Query: 617  IKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEPENQEVKK 438
            IKRFEEAE+DCTEALNLDDRYIKAYSRRATARKEL KLK +IED+EFALRLEP NQE+KK
Sbjct: 181  IKRFEEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKAAIEDAEFALRLEPNNQELKK 240

Query: 437  QHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHTKVGGKPSDVGSGSKTARI 258
            Q+A+ K LY KE+LKKAS   AR++ Q      V  ++    K   KPS +    K+   
Sbjct: 241  QYAESKALYDKEILKKAS-GIARNAIQGETAAQVDRMKGTDGKFPSKPSIIVQEIKSK-- 297

Query: 257  SVASGNISSKPQSYGPSEGG--KALKVNPQGVQSLDKKREQKTAVQELXXXXXXXXXXXX 84
            +   G  S   +S G  E    K+     +G  ++DK+ E KT+VQEL            
Sbjct: 298  TTVGGTRSWIKESDGSQEDATLKSSADTFKGSHAVDKREELKTSVQELASRAASRAMAEA 357

Query: 83   AKNLSPPKTAYQFEVSWKGLSGDPALQ 3
             KN++PPK+AY+FEVSW+GLSGD ALQ
Sbjct: 358  VKNITPPKSAYEFEVSWRGLSGDRALQ 384


>ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Populus trichocarpa]
            gi|550337753|gb|ERP60190.1| hypothetical protein
            POPTR_0005s01710g [Populus trichocarpa]
          Length = 402

 Score =  311 bits (798), Expect = 4e-82
 Identities = 190/366 (51%), Positives = 228/366 (62%), Gaps = 32/366 (8%)
 Frame = -2

Query: 1004 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSP------GVSEKRVSMT 843
            MARVP KH RDQ LDFQG L+DLQ W           K    S       G SE + S  
Sbjct: 1    MARVPGKHGRDQALDFQGFLNDLQDWELLKDTDKKMKKKSRASDVKIGEDGRSEGKTSAA 60

Query: 842  SSN-----QFGYSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSR 678
             S+     Q+ YSRN   I R+S+S   DE + DA ++KELGNEYFKQKKFNEAI+CYSR
Sbjct: 61   DSSRSGSGQYEYSRNFGAINRLSSSFTTDEITVDATTEKELGNEYFKQKKFNEAIECYSR 120

Query: 677  SIALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKE 498
            SIALSP+AVAYANRAMAYL+IKRF EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKE
Sbjct: 121  SIALSPTAVAYANRAMAYLKIKRFREAEDDCTEALNLDDRYIKAYSRRATARKELGKLKE 180

Query: 497  SIEDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTE---- 330
            SIEDSEFAL+LEP NQE+KKQ+A+VK LY+KE+L+KAS    R S Q  ++ G +E    
Sbjct: 181  SIEDSEFALKLEPNNQEIKKQYAEVKSLYEKEILQKAS-GTLRSSLQGTQQGGRSEASVN 239

Query: 329  --------IQTGHTKVGGKPSD---VGSGSKTARISVASGNISSKPQSYGPSEGGKALKV 183
                    I T  T V     D      G+   + SV    + ++ +S G          
Sbjct: 240  GHAVHPVSIATQKTGVSASKKDNTKENDGNNLVKKSVHVKELRNRSKSDGHVGNDSPANA 299

Query: 182  NP-QGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLS 21
             P   V+S+ K     ++E KT+V EL            AKN++PP +AYQFEVSW+G S
Sbjct: 300  TPSSSVESVQKNNRTRRQELKTSVIELASQAASRAMAEAAKNITPPNSAYQFEVSWQGFS 359

Query: 20   GDPALQ 3
            GD ALQ
Sbjct: 360  GDRALQ 365


>ref|XP_008388471.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Malus
            domestica]
          Length = 412

 Score =  309 bits (792), Expect = 2e-81
 Identities = 180/336 (53%), Positives = 212/336 (63%), Gaps = 2/336 (0%)
 Frame = -2

Query: 1004 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGVSEKRVSMTSSNQFG 825
            MAR PNKH RDQ LDFQG LSDLQ W           + Q       + R S TSS  + 
Sbjct: 1    MARPPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQVSQQEXLKTRDSGTSSGNYD 60

Query: 824  YSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAY 645
            YSRN D I RIS+SL  ++  PDA S+KELGNEYFKQKKF EAIDCYSRSIALSPSAVAY
Sbjct: 61   YSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSAVAY 120

Query: 644  ANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRL 465
            ANR MAY++I+RF+EAE+DCT ALNLDDRYIKAYSRRATARKEL KLKES ED+EFALRL
Sbjct: 121  ANRGMAYIKIRRFQEAEDDCTXALNLDDRYIKAYSRRATARKELGKLKESFEDAEFALRL 180

Query: 464  EPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHTKVGGKP-SD 288
            EP NQE+KKQ+ + K LY K  L+KAS  A ++S QE ++ G  +     TKV GK    
Sbjct: 181  EPHNQEIKKQYTEAKSLYDKSNLEKAS-GALKNSVQEXQKRGKLD-----TKVNGKGIQP 234

Query: 287  VGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQKTAVQEL-XXX 111
            V   ++   I+    +                         + +KK E K +VQEL    
Sbjct: 235  VSXSAQITEITXVQDHTKG---------------------DNTNKKLEVKASVQELASRA 273

Query: 110  XXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
                      KN++PP TAYQFEVSW+ LSGD ALQ
Sbjct: 274  ASKAKVVAAEKNITPPTTAYQFEVSWRDLSGDSALQ 309


>ref|XP_011038926.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X3
            [Populus euphratica]
          Length = 472

 Score =  309 bits (791), Expect = 3e-81
 Identities = 185/370 (50%), Positives = 223/370 (60%), Gaps = 36/370 (9%)
 Frame = -2

Query: 1004 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGVSEKR---------- 855
            MAR P KH RDQ LDFQG L+DLQ W                S  + E            
Sbjct: 1    MARAPGKHGRDQALDFQGFLNDLQDWELLKDTDKKVKTKSQASDKIGEDGRSKGKTSAVD 60

Query: 854  VSMTSSNQFGYSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRS 675
             S + S Q+ YSRN   I R+S++   DE + DA ++KELGNEYFKQKKFNEAI+CYSRS
Sbjct: 61   SSRSGSGQYDYSRNFGAINRLSSNFTTDEITVDATTEKELGNEYFKQKKFNEAIECYSRS 120

Query: 674  IALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKES 495
            IALSP+AVAYANRAMAYL+IKRF EAE+DCTE LNLDD YIKAYSRRATARKEL KLKES
Sbjct: 121  IALSPTAVAYANRAMAYLKIKRFREAEDDCTETLNLDDHYIKAYSRRATARKELGKLKES 180

Query: 494  IEDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTE----- 330
            IEDSEFAL+LEP NQE+KKQ+A+VK LY+KE+L+KAS  A R S Q  ++ G +E     
Sbjct: 181  IEDSEFALKLEPINQEIKKQYAEVKSLYEKEILQKAS-GALRSSLQGTQKGGRSEASVNG 239

Query: 329  -------IQTGHTKVGGKPSD---VGSGSKTARISVASGNISSKPQSYGPSEGGKALKVN 180
                   I T +T V     D      G+   + SV    + +K    G    G     +
Sbjct: 240  HAVHPVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGSKSDGHVGNDS 299

Query: 179  P------QGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVSW 33
            P        V S+ K     ++E KT+V EL            AKN++PP +AYQFEVSW
Sbjct: 300  PANATLSSSVDSVQKNNRTQRQELKTSVMELASQAASRAMAEAAKNITPPNSAYQFEVSW 359

Query: 32   KGLSGDPALQ 3
            +G SGD ALQ
Sbjct: 360  RGFSGDRALQ 369


>ref|XP_009373287.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Pyrus x
            bretschneideri]
          Length = 412

 Score =  309 bits (791), Expect = 3e-81
 Identities = 182/336 (54%), Positives = 219/336 (65%), Gaps = 2/336 (0%)
 Frame = -2

Query: 1004 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGVSEKRVSMTSSNQFG 825
            MA  PNKH RDQ LDFQG LSDLQ W           + Q       + R S TSS  + 
Sbjct: 1    MASPPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQVSQQEKLKTRDSGTSSENYD 60

Query: 824  YSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAY 645
            YSRN D I RIS+SL  ++  PDA S+KELGNEYFKQKKF EAIDCYSRSIALSPSAVAY
Sbjct: 61   YSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSAVAY 120

Query: 644  ANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRL 465
            ANR MA ++IKRF+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKES ED+EFALRL
Sbjct: 121  ANRGMACIKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESFEDAEFALRL 180

Query: 464  EPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHTKVGGKP-SD 288
            EP NQE+K+Q+ + K LY K  L+KAS  A ++S QE ++ G ++     TKV GK    
Sbjct: 181  EPHNQEIKRQYTEAKSLYDKSNLQKAS-GALKNSVQEMQKRGKSD-----TKVNGKGIQP 234

Query: 287  VGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQKTAVQEL-XXX 111
            V S ++   I+                    A++ + +G  + +KK+E K +VQEL    
Sbjct: 235  VSSKAQITEIT--------------------AVQDHDKG-DNTNKKQEVKASVQELASRA 273

Query: 110  XXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
                      KN++PP TAYQFEVSW+ LSGD ALQ
Sbjct: 274  ASKAKVVAAEKNITPPTTAYQFEVSWRDLSGDSALQ 309


>ref|XP_011038925.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
            [Populus euphratica]
          Length = 472

 Score =  308 bits (790), Expect = 4e-81
 Identities = 185/370 (50%), Positives = 223/370 (60%), Gaps = 36/370 (9%)
 Frame = -2

Query: 1004 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGVSEKR---------- 855
            MAR P KH RDQ LDFQG L+DLQ W                S  + E            
Sbjct: 1    MARAPGKHGRDQALDFQGFLNDLQDWELLKDTDKKVKTKSQASDVIGEDGRSKGKTSAVD 60

Query: 854  VSMTSSNQFGYSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRS 675
             S + S Q+ YSRN   I R+S++   DE + DA ++KELGNEYFKQKKFNEAI+CYSRS
Sbjct: 61   SSRSGSGQYDYSRNFGAINRLSSNFTTDEITVDATTEKELGNEYFKQKKFNEAIECYSRS 120

Query: 674  IALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKES 495
            IALSP+AVAYANRAMAYL+IKRF EAE+DCTE LNLDD YIKAYSRRATARKEL KLKES
Sbjct: 121  IALSPTAVAYANRAMAYLKIKRFREAEDDCTETLNLDDHYIKAYSRRATARKELGKLKES 180

Query: 494  IEDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTE----- 330
            IEDSEFAL+LEP NQE+KKQ+A+VK LY+KE+L+KAS  A R S Q  ++ G +E     
Sbjct: 181  IEDSEFALKLEPINQEIKKQYAEVKSLYEKEILQKAS-GALRSSLQGTQKGGRSEASVNG 239

Query: 329  -------IQTGHTKVGGKPSD---VGSGSKTARISVASGNISSKPQSYGPSEGGKALKVN 180
                   I T +T V     D      G+   + SV    + +K    G    G     +
Sbjct: 240  HAVHPVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGSKSDGHVGNDS 299

Query: 179  P------QGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVSW 33
            P        V S+ K     ++E KT+V EL            AKN++PP +AYQFEVSW
Sbjct: 300  PANATLSSSVDSVQKNNRTQRQELKTSVMELASQAASRAMAEAAKNITPPNSAYQFEVSW 359

Query: 32   KGLSGDPALQ 3
            +G SGD ALQ
Sbjct: 360  RGFSGDRALQ 369


>ref|XP_011023786.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Populus
            euphratica]
          Length = 472

 Score =  308 bits (789), Expect = 5e-81
 Identities = 185/370 (50%), Positives = 225/370 (60%), Gaps = 36/370 (9%)
 Frame = -2

Query: 1004 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGVSEKRVSM------- 846
            MAR P KH RDQ LDFQG L+DLQ W           K    S  + E   S        
Sbjct: 1    MARAPGKHGRDQALDFQGFLNDLQDWELLKDTDKKMKKKSQASDMIGEDERSTGKTSSAV 60

Query: 845  ---TSSNQFGYSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRS 675
               +SS  + +SRN D I R+SNS   DE + DA ++KELGNEYFKQKK+ EAI+CYSRS
Sbjct: 61   DFSSSSGMYDHSRNFDAINRLSNSFAIDESTVDATTEKELGNEYFKQKKYKEAIECYSRS 120

Query: 674  IALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKES 495
            IALSP+AVAYANRAMAYL+IKRF EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKES
Sbjct: 121  IALSPTAVAYANRAMAYLKIKRFPEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKES 180

Query: 494  IEDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQ-TG 318
            IEDSEFAL+LEP NQE+KKQ+A+VK LY+KE+L+KAS  + R S Q AK+ G +E    G
Sbjct: 181  IEDSEFALKLEPNNQEIKKQYAEVKSLYEKEILQKAS-ESLRSSLQGAKKGGRSETSVNG 239

Query: 317  HT---------KVGGKPSD-----VGSGSKTARISVASGNISSKPQSYGPSEGG------ 198
            H          + G   S         G    + SV    I +K    G    G      
Sbjct: 240  HAVHPVSNVTRRTGASASQKDKAKENDGDGVVKKSVYVEEIKNKSTGAGSRSDGQLGNDS 299

Query: 197  KALKVNPQGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVSW 33
            +A  +     + + +     ++E K +V+EL            AKN++PP +AYQFEVSW
Sbjct: 300  RANAIPSSNAEIIQRNNRAGRQELKASVKELASQAASRAMAEAAKNITPPNSAYQFEVSW 359

Query: 32   KGLSGDPALQ 3
            +G SGD ALQ
Sbjct: 360  RGFSGDRALQ 369


>ref|XP_008246007.1| PREDICTED: RNA polymerase II-associated protein 3 [Prunus mume]
          Length = 411

 Score =  308 bits (789), Expect = 5e-81
 Identities = 174/335 (51%), Positives = 214/335 (63%), Gaps = 1/335 (0%)
 Frame = -2

Query: 1004 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGVSEKRVSMTSSNQFG 825
            MAR PNKH RDQ LDFQG LSDLQ W           + Q       + R   TSS  + 
Sbjct: 1    MARAPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQDSHQEKLKTRDLGTSSGNYD 60

Query: 824  YSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAY 645
            YSRN D I  +S+S   ++  PDA S+KELGNEYFKQKKF EAIDCYSRSIALSPSAVAY
Sbjct: 61   YSRNLDSINTMSSSFTSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSAVAY 120

Query: 644  ANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRL 465
            ANRAMAY++IK F EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIED+EFALRL
Sbjct: 121  ANRAMAYIKIKSFREAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDAEFALRL 180

Query: 464  EPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHTKVGGKP-SD 288
            EP+NQE+KKQ+ + K LY+K +L+K S  A ++S QE ++VG  +     TKV G+    
Sbjct: 181  EPQNQEIKKQYTEAKSLYEKTILQKTS-GARKNSVQEMQKVGKLD-----TKVNGQSIQP 234

Query: 287  VGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQKTAVQELXXXX 108
            V S ++   ++    +                         +  +K+E K +VQEL    
Sbjct: 235  VSSSAQITEMTAVQDHTKR---------------------NNTTRKQEVKASVQELASRA 273

Query: 107  XXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
                    A+ ++PP +AYQFEVSW+GL+GD A Q
Sbjct: 274  ASRVKAVAAEKITPPNSAYQFEVSWRGLAGDNAGQ 308


>ref|XP_011038924.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
            [Populus euphratica]
          Length = 473

 Score =  307 bits (786), Expect = 1e-80
 Identities = 186/371 (50%), Positives = 225/371 (60%), Gaps = 37/371 (9%)
 Frame = -2

Query: 1004 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSP------GVSEKRVSMT 843
            MAR P KH RDQ LDFQG L+DLQ W                S       G S+ + S  
Sbjct: 1    MARAPGKHGRDQALDFQGFLNDLQDWELLKDTDKKVKTKSQASDVKIGEDGRSKGKTSAV 60

Query: 842  SSN-----QFGYSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSR 678
             S+     Q+ YSRN   I R+S++   DE + DA ++KELGNEYFKQKKFNEAI+CYSR
Sbjct: 61   DSSRSGSGQYDYSRNFGAINRLSSNFTTDEITVDATTEKELGNEYFKQKKFNEAIECYSR 120

Query: 677  SIALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKE 498
            SIALSP+AVAYANRAMAYL+IKRF EAE+DCTE LNLDD YIKAYSRRATARKEL KLKE
Sbjct: 121  SIALSPTAVAYANRAMAYLKIKRFREAEDDCTETLNLDDHYIKAYSRRATARKELGKLKE 180

Query: 497  SIEDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTE---- 330
            SIEDSEFAL+LEP NQE+KKQ+A+VK LY+KE+L+KAS  A R S Q  ++ G +E    
Sbjct: 181  SIEDSEFALKLEPINQEIKKQYAEVKSLYEKEILQKAS-GALRSSLQGTQKGGRSEASVN 239

Query: 329  --------IQTGHTKVGGKPSD---VGSGSKTARISVASGNISSKPQSYGPSEGGKALKV 183
                    I T +T V     D      G+   + SV    + +K    G    G     
Sbjct: 240  GHAVHPVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGSKSDGHVGND 299

Query: 182  NP------QGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVS 36
            +P        V S+ K     ++E KT+V EL            AKN++PP +AYQFEVS
Sbjct: 300  SPANATLSSSVDSVQKNNRTQRQELKTSVMELASQAASRAMAEAAKNITPPNSAYQFEVS 359

Query: 35   WKGLSGDPALQ 3
            W+G SGD ALQ
Sbjct: 360  WRGFSGDRALQ 370


>ref|XP_011023785.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Populus
            euphratica]
          Length = 473

 Score =  307 bits (786), Expect = 1e-80
 Identities = 186/371 (50%), Positives = 225/371 (60%), Gaps = 37/371 (9%)
 Frame = -2

Query: 1004 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSP---GVSEKRVSMTSS- 837
            MAR P KH RDQ LDFQG L+DLQ W           K    S    G  E+    TSS 
Sbjct: 1    MARAPGKHGRDQALDFQGFLNDLQDWELLKDTDKKMKKKSQASDMKIGEDERSTGKTSSA 60

Query: 836  -------NQFGYSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSR 678
                     + +SRN D I R+SNS   DE + DA ++KELGNEYFKQKK+ EAI+CYSR
Sbjct: 61   VDFSSSSGMYDHSRNFDAINRLSNSFAIDESTVDATTEKELGNEYFKQKKYKEAIECYSR 120

Query: 677  SIALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKE 498
            SIALSP+AVAYANRAMAYL+IKRF EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKE
Sbjct: 121  SIALSPTAVAYANRAMAYLKIKRFPEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKE 180

Query: 497  SIEDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQ-T 321
            SIEDSEFAL+LEP NQE+KKQ+A+VK LY+KE+L+KAS  + R S Q AK+ G +E    
Sbjct: 181  SIEDSEFALKLEPNNQEIKKQYAEVKSLYEKEILQKAS-ESLRSSLQGAKKGGRSETSVN 239

Query: 320  GHT---------KVGGKPSD-----VGSGSKTARISVASGNISSKPQSYGPSEGG----- 198
            GH          + G   S         G    + SV    I +K    G    G     
Sbjct: 240  GHAVHPVSNVTRRTGASASQKDKAKENDGDGVVKKSVYVEEIKNKSTGAGSRSDGQLGND 299

Query: 197  -KALKVNPQGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVS 36
             +A  +     + + +     ++E K +V+EL            AKN++PP +AYQFEVS
Sbjct: 300  SRANAIPSSNAEIIQRNNRAGRQELKASVKELASQAASRAMAEAAKNITPPNSAYQFEVS 359

Query: 35   WKGLSGDPALQ 3
            W+G SGD ALQ
Sbjct: 360  WRGFSGDRALQ 370


>ref|XP_009373288.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Pyrus x
            bretschneideri]
          Length = 411

 Score =  306 bits (784), Expect = 2e-80
 Identities = 184/340 (54%), Positives = 222/340 (65%), Gaps = 6/340 (1%)
 Frame = -2

Query: 1004 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGVSEK----RVSMTSS 837
            MA  PNKH RDQ LDFQG LSDLQ W             +   P VS++    R S TSS
Sbjct: 1    MASPPNKHGRDQALDFQGFLSDLQDWELSLKDKD-----KKMRPQVSQQEKLTRDSGTSS 55

Query: 836  NQFGYSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRSIALSPS 657
              + YSRN D I RIS+SL  ++  PDA S+KELGNEYFKQKKF EAIDCYSRSIALSPS
Sbjct: 56   ENYDYSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPS 115

Query: 656  AVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEF 477
            AVAYANR MA ++IKRF+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKES ED+EF
Sbjct: 116  AVAYANRGMACIKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESFEDAEF 175

Query: 476  ALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHTKVGGK 297
            ALRLEP NQE+K+Q+ + K LY K  L+KAS  A ++S QE ++ G ++     TKV GK
Sbjct: 176  ALRLEPHNQEIKRQYTEAKSLYDKSNLQKAS-GALKNSVQEMQKRGKSD-----TKVNGK 229

Query: 296  P-SDVGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQKTAVQEL 120
                V S ++   I+                    A++ + +G  + +KK+E K +VQEL
Sbjct: 230  GIQPVSSKAQITEIT--------------------AVQDHDKG-DNTNKKQEVKASVQEL 268

Query: 119  -XXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
                          KN++PP TAYQFEVSW+ LSGD ALQ
Sbjct: 269  ASRAASKAKVVAAEKNITPPTTAYQFEVSWRDLSGDSALQ 308


>ref|XP_008388472.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Malus
            domestica]
          Length = 411

 Score =  306 bits (784), Expect = 2e-80
 Identities = 182/340 (53%), Positives = 215/340 (63%), Gaps = 6/340 (1%)
 Frame = -2

Query: 1004 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGVSEK----RVSMTSS 837
            MAR PNKH RDQ LDFQG LSDLQ W             +   P VS++    R S TSS
Sbjct: 1    MARPPNKHGRDQALDFQGFLSDLQDWELSLKDKD-----KKMRPQVSQQEXLTRDSGTSS 55

Query: 836  NQFGYSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRSIALSPS 657
              + YSRN D I RIS+SL  ++  PDA S+KELGNEYFKQKKF EAIDCYSRSIALSPS
Sbjct: 56   GNYDYSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPS 115

Query: 656  AVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEF 477
            AVAYANR MAY++I+RF+EAE+DCT ALNLDDRYIKAYSRRATARKEL KLKES ED+EF
Sbjct: 116  AVAYANRGMAYIKIRRFQEAEDDCTXALNLDDRYIKAYSRRATARKELGKLKESFEDAEF 175

Query: 476  ALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHTKVGGK 297
            ALRLEP NQE+KKQ+ + K LY K  L+KAS  A ++S QE ++ G  +     TKV GK
Sbjct: 176  ALRLEPHNQEIKKQYTEAKSLYDKSNLEKAS-GALKNSVQEXQKRGKLD-----TKVNGK 229

Query: 296  P-SDVGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQKTAVQEL 120
                V   ++   I+    +                         + +KK E K +VQEL
Sbjct: 230  GIQPVSXSAQITEITXVQDHTKG---------------------DNTNKKLEVKASVQEL 268

Query: 119  -XXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
                          KN++PP TAYQFEVSW+ LSGD ALQ
Sbjct: 269  ASRAASKAKVVAAEKNITPPTTAYQFEVSWRDLSGDSALQ 308


>ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated protein 3-like [Citrus
            sinensis]
          Length = 438

 Score =  306 bits (784), Expect = 2e-80
 Identities = 178/345 (51%), Positives = 225/345 (65%), Gaps = 17/345 (4%)
 Frame = -2

Query: 986  KHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSP----GVSEKRVSMTSSNQFGYS 819
            KHNRDQ LDFQG L+DLQ W           K ++ S       S K     S +   YS
Sbjct: 3    KHNRDQALDFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGNSYS 62

Query: 818  RNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYAN 639
            RN DP++ IS+SL+++E +PDA S+KELGNE FKQKKF EAIDCYSRSIALSP+AVAYAN
Sbjct: 63   RNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYAN 122

Query: 638  RAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEP 459
            RAMAYL+++RF+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIEDSEFALRLEP
Sbjct: 123  RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEP 182

Query: 458  ENQEVKKQHADVKGLYKKEVLKKAS-------AAAARDSTQEAKRVGVTEIQTGHTKVGG 300
            +NQE+KKQ A+VK LY+KEV +KAS        +  + +  E + V  T  +TG  ++  
Sbjct: 183  QNQEIKKQLAEVKSLYEKEVFQKASKTLEKYGKSGMKVNGHEVRAVRNTTQKTGVAEI-- 240

Query: 299  KPSDVGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQ------K 138
               D+    KT      + N+  + ++ G  +G  A   N   +  LDK+  +       
Sbjct: 241  --QDLTISKKT-----ENKNLRDESKTEGQRDGSGA---NATHISGLDKRNHRTKKAVLD 290

Query: 137  TAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
             +VQEL            AKN++PPK+AY+FEVSW+G +GD ALQ
Sbjct: 291  ASVQELATRATSRAVAEAAKNITPPKSAYEFEVSWRGFAGDHALQ 335


>gb|KDO81669.1| hypothetical protein CISIN_1g013696mg [Citrus sinensis]
          Length = 372

 Score =  305 bits (782), Expect = 3e-80
 Identities = 178/341 (52%), Positives = 222/341 (65%), Gaps = 13/341 (3%)
 Frame = -2

Query: 986  KHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSP----GVSEKRVSMTSSNQFGYS 819
            KHNRDQ LDFQG L+DLQ W           K ++ S       S K     S +   YS
Sbjct: 3    KHNRDQALDFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGNSYS 62

Query: 818  RNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYAN 639
            RN DP++ IS+SL+++E +PDA S+KELGNE FKQKKF EAIDCYSRSIALSP+AVAYAN
Sbjct: 63   RNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYAN 122

Query: 638  RAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEP 459
            RAMAYL+++RF+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIEDSEFALRLEP
Sbjct: 123  RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEP 182

Query: 458  ENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVG--VTEIQTGHTKVG-GKPSD 288
            +NQE+KKQ A+VK LY+KEV +KAS    +      K  G  V  ++    K G  +  D
Sbjct: 183  QNQEIKKQLAEVKSLYEKEVFQKASKTLEKYGKSGMKVNGHEVRAVRNTIQKTGVAEIQD 242

Query: 287  VGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQ------KTAVQ 126
            +    KT      + N+  + ++ G  +G  A   N   +  LDK+  +        +VQ
Sbjct: 243  LTISKKT-----ENKNLRDESKTEGQRDGSGA---NATHISGLDKRNHRTKKAVLDASVQ 294

Query: 125  ELXXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
            EL            AKN++PPK+AY+FEVSW+G +GD ALQ
Sbjct: 295  ELATRATSRAVAEAAKNITPPKSAYEFEVSWRGFAGDHALQ 335


>gb|KDO81667.1| hypothetical protein CISIN_1g013696mg [Citrus sinensis]
          Length = 438

 Score =  305 bits (782), Expect = 3e-80
 Identities = 178/341 (52%), Positives = 222/341 (65%), Gaps = 13/341 (3%)
 Frame = -2

Query: 986  KHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSP----GVSEKRVSMTSSNQFGYS 819
            KHNRDQ LDFQG L+DLQ W           K ++ S       S K     S +   YS
Sbjct: 3    KHNRDQALDFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGNSYS 62

Query: 818  RNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYAN 639
            RN DP++ IS+SL+++E +PDA S+KELGNE FKQKKF EAIDCYSRSIALSP+AVAYAN
Sbjct: 63   RNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYAN 122

Query: 638  RAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEP 459
            RAMAYL+++RF+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIEDSEFALRLEP
Sbjct: 123  RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEP 182

Query: 458  ENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVG--VTEIQTGHTKVG-GKPSD 288
            +NQE+KKQ A+VK LY+KEV +KAS    +      K  G  V  ++    K G  +  D
Sbjct: 183  QNQEIKKQLAEVKSLYEKEVFQKASKTLEKYGKSGMKVNGHEVRAVRNTIQKTGVAEIQD 242

Query: 287  VGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQ------KTAVQ 126
            +    KT      + N+  + ++ G  +G  A   N   +  LDK+  +        +VQ
Sbjct: 243  LTISKKT-----ENKNLRDESKTEGQRDGSGA---NATHISGLDKRNHRTKKAVLDASVQ 294

Query: 125  ELXXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
            EL            AKN++PPK+AY+FEVSW+G +GD ALQ
Sbjct: 295  ELATRATSRAVAEAAKNITPPKSAYEFEVSWRGFAGDHALQ 335


>gb|KHG26705.1| RNA polymerase II-associated 3 [Gossypium arboreum]
          Length = 472

 Score =  305 bits (781), Expect = 4e-80
 Identities = 180/374 (48%), Positives = 224/374 (59%), Gaps = 45/374 (12%)
 Frame = -2

Query: 989  NKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGVSEKRV-------------- 852
            +KH+RDQ +DFQG L+DLQ W           K  S + G  +  +              
Sbjct: 3    SKHSRDQAMDFQGFLNDLQDWELSLKDKGKNKKMTSQASGKEQLNITEKGRPTGKRSLNS 62

Query: 851  --SMTSSNQFGYSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSR 678
              S TSS Q+ Y +N D  + +S S + +E  PDA S+KELGNEYFKQKKF EAIDCYSR
Sbjct: 63   SSSTTSSEQYDYLKNYDKWSNLSTSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSR 122

Query: 677  SIALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKE 498
            SIALSP+AVAYANRAMAYL+I++F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKE
Sbjct: 123  SIALSPTAVAYANRAMAYLKIRKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKE 182

Query: 497  SIEDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAAR----------------- 369
            SIED+EF LRLEP +Q++KKQHA+ K LY+KE+L+KAS    +                 
Sbjct: 183  SIEDAEFGLRLEPNSQDMKKQHAEFKALYEKEILQKASGVIKKSMQGAQEVGKSATIDNG 242

Query: 368  -------DSTQEAKRVGVTEIQTGHTKVGGKPSDVGSGSKTARISVASGNISSKPQSYGP 210
                   DSTQ   R G+   Q   TKV    S++    K  + SV    I  +  S G 
Sbjct: 243  LGMHTMSDSTQ---RKGIAAAQGSQTKV----SEIDKQKKPEKGSVTLEEIGKRNTSAGN 295

Query: 209  SEGGKALKVNPQGVQSL-----DKKREQKTAVQELXXXXXXXXXXXXAKNLSPPKTAYQF 45
            +  G  L V   G +++      +K+E K +VQ+L            AKN+SPP TAYQF
Sbjct: 296  TADGTQLDVEIAGPENIKRNTKTRKQELKASVQDLAFRAASRAMAEAAKNISPPNTAYQF 355

Query: 44   EVSWKGLSGDPALQ 3
            EVSW+ LSGD  LQ
Sbjct: 356  EVSWRALSGDRLLQ 369


>ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 4 [Theobroma cacao] gi|508719766|gb|EOY11663.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 4 [Theobroma cacao]
          Length = 421

 Score =  305 bits (781), Expect = 4e-80
 Identities = 183/341 (53%), Positives = 218/341 (63%), Gaps = 12/341 (3%)
 Frame = -2

Query: 989 NKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPG--VSEKR----------VSM 846
           +KH+RDQ LDFQG L++LQ W           K+Q+       +EK            S 
Sbjct: 3   SKHSRDQALDFQGFLNNLQDWELSLKEKDKIMKSQASDKEQLTNEKGRPTGKSSLIDSST 62

Query: 845 TSSNQFGYSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRSIAL 666
           TSS Q+ Y +N D    +S+S + +E  PDA S+KELGNEYFKQKKF EAIDCYSRSI L
Sbjct: 63  TSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIGL 122

Query: 665 SPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIED 486
           SP+AVA+ANRAMAYL+IK+F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIED
Sbjct: 123 SPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 182

Query: 485 SEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHTKV 306
           +EFALRLEP NQE+KKQHA+ K LY+KE+L+KAS    R S QEA+ VG +E     TK 
Sbjct: 183 TEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQEVGKSE-----TKE 236

Query: 305 GGKPSDVGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQKTAVQ 126
            G      S S T R  VA+       Q Y   +  +             +K E K +VQ
Sbjct: 237 NGLGMHSASNS-TQRTGVAT------VQGYQTKKNNRT------------RKPELKASVQ 277

Query: 125 ELXXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
           EL            AKN+SPP TAYQFEVSW+ LSGD ALQ
Sbjct: 278 ELASLAATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQ 318


>ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citrus clementina]
            gi|557535662|gb|ESR46780.1| hypothetical protein
            CICLE_v10003914mg [Citrus clementina]
          Length = 977

 Score =  305 bits (780), Expect = 5e-80
 Identities = 180/350 (51%), Positives = 225/350 (64%), Gaps = 13/350 (3%)
 Frame = -2

Query: 1013 YYAMARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSP----GVSEKRVSM 846
            Y A+      HNRDQ LDFQG L+DLQ W           K ++ S       S K    
Sbjct: 533  YKAINEKMPPHNRDQALDFQGFLNDLQDWDLSLHEKDKKMKHKASSKDNLVSSSLKSGEK 592

Query: 845  TSSNQFGYSRNSDPITRISNSLLHDEESPDANSQKELGNEYFKQKKFNEAIDCYSRSIAL 666
             S +   YSRN DP++RIS+SL+++E +PDA S+KELGNE FKQKKF EAIDCYSRSIAL
Sbjct: 593  PSPSGNSYSRNYDPVSRISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIAL 652

Query: 665  SPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIED 486
            SP+AVAYANRAMAYL+++RF+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIED
Sbjct: 653  SPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 712

Query: 485  SEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVG--VTEIQTGHT 312
            SEFALRLEP+NQE+KKQ A+VK LY+KEV +KAS    +      K  G  V  ++    
Sbjct: 713  SEFALRLEPQNQEIKKQLAEVKSLYEKEVFQKASKTLEKYGKSGMKVNGHEVRAVRNTIQ 772

Query: 311  KVG-GKPSDVGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQ-- 141
            K G  +  D+    KT      + N+  + ++ G  +G  A   N   +  LDK+  +  
Sbjct: 773  KTGVAEIQDLTISKKT-----ENKNLRDESKTEGQRDGSGA---NATHISGLDKRNHRTK 824

Query: 140  ----KTAVQELXXXXXXXXXXXXAKNLSPPKTAYQFEVSWKGLSGDPALQ 3
                  +VQEL            AKN++PPK+AY+FEVSW+G +GD ALQ
Sbjct: 825  KAVLDASVQELATRATSRAVAEAAKNITPPKSAYEFEVSWRGFAGDHALQ 874