BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00035860
         (1064 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010649354.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   511   e-142
ref|XP_010649353.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   509   e-141
emb|CBI37517.3| unnamed protein product [Vitis vinifera]              507   e-141
ref|XP_008227548.1| PREDICTED: DNA topoisomerase 3-alpha [Prunus...   501   e-139
ref|XP_010649355.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   500   e-139
ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [The...   499   e-138
ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma ca...   499   e-138
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   497   e-138
ref|XP_012489371.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   497   e-138
ref|XP_010270299.1| PREDICTED: DNA topoisomerase 3-alpha [Nelumb...   496   e-137
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   495   e-137
ref|XP_011465095.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   493   e-136
ref|XP_009622051.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   491   e-136
ref|XP_009622049.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   491   e-136
ref|XP_012489370.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   489   e-135
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   488   e-135
ref|XP_012489369.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   485   e-134
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   485   e-134
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha [Cicer ...   484   e-134
ref|XP_010320983.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   483   e-133

>ref|XP_010649354.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Vitis vinifera]
          Length = 918

 Score =  511 bits (1317), Expect = e-142
 Identities = 246/354 (69%), Positives = 283/354 (79%)
 Frame = -1

Query: 1064 FGQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDA 885
            FGQQF+PT+LTLDSG+TRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDR YATKD+
Sbjct: 474  FGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDS 533

Query: 884  NMRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMET 705
            N RFSPT LGEALVMGYDDMGYELWKP LR+ ME  MKAVS G K + +VL  CLE+M+ 
Sbjct: 534  NTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKA 593

Query: 704  CFRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFM 525
            CF DARL K +LL+AM +FFERSNR+ G +QH  G+VVR+C  C ESDMVLR+K DGNFM
Sbjct: 594  CFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFM 653

Query: 524  VGCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGC 345
            VGCLGYPQCRN VWLPGSI EAA+T   C  CTP PV+ IQFKFRR++IPPN++ +HLGC
Sbjct: 654  VGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGC 713

Query: 344  VGGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQT 165
            V GCD+ILRQL +ICGTGSR   S+ P RG G  A+S N QRSN   +     C+HC QT
Sbjct: 714  VCGCDEILRQLTEICGTGSR-ICSTVPARGRGSNASSTNAQRSNTRQT----ACIHCSQT 768

Query: 164  GHSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            GHSSN+C +R+PR + SQS   N   GE+S+ C+ CG PC LR ANTENNRGRK
Sbjct: 769  GHSSNDCPSRVPRSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNRGRK 822


>ref|XP_010649353.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Vitis vinifera]
          Length = 919

 Score =  509 bits (1312), Expect = e-141
 Identities = 244/354 (68%), Positives = 281/354 (79%)
 Frame = -1

Query: 1064 FGQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDA 885
            FGQQF+PT+LTLDSG+TRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDR YATKD+
Sbjct: 474  FGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDS 533

Query: 884  NMRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMET 705
            N RFSPT LGEALVMGYDDMGYELWKP LR+ ME  MKAVS G K + +VL  CLE+M+ 
Sbjct: 534  NTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKA 593

Query: 704  CFRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFM 525
            CF DARL K +LL+AM +FFERSNR+ G +QH  G+VVR+C  C ESDMVLR+K DGNFM
Sbjct: 594  CFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFM 653

Query: 524  VGCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGC 345
            VGCLGYPQCRN VWLPGSI EAA+T   C  CTP PV+ IQFKFRR++IPPN++ +HLGC
Sbjct: 654  VGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGC 713

Query: 344  VGGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQT 165
            V GCD+ILRQL +ICGTGSR   +    RG G  A+S N QRSN   +     C+HC QT
Sbjct: 714  VCGCDEILRQLTEICGTGSRICSTVPAARGRGSNASSTNAQRSNTRQT----ACIHCSQT 769

Query: 164  GHSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            GHSSN+C +R+PR + SQS   N   GE+S+ C+ CG PC LR ANTENNRGRK
Sbjct: 770  GHSSNDCPSRVPRSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNRGRK 823


>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  507 bits (1306), Expect = e-141
 Identities = 245/354 (69%), Positives = 281/354 (79%)
 Frame = -1

Query: 1064 FGQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDA 885
            FGQQF+PT+LTLDSG+TRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDR YATKD+
Sbjct: 149  FGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDS 208

Query: 884  NMRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMET 705
            N RFSPT LGEALVMGYDDMGYELWKP LR+ ME  MKAVS G K + +VL  CLE+M+ 
Sbjct: 209  NTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKA 268

Query: 704  CFRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFM 525
            CF DARL K +LL+AM +FFERSNR+ G +QH  G+VVR+C  C ESDMVLR+K DGNFM
Sbjct: 269  CFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFM 328

Query: 524  VGCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGC 345
            VGCLGYPQCRN VWLPGSI EAA+T   C  CTP PV+ IQFKFRR++IPPN++ +HLGC
Sbjct: 329  VGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGC 388

Query: 344  VGGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQT 165
            V GCD+ILRQL +ICGTGSR S      RG G  A+S N QRSN   +     C+HC QT
Sbjct: 389  VCGCDEILRQLTEICGTGSRIS-----ARGRGSNASSTNAQRSNTRQT----ACIHCSQT 439

Query: 164  GHSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            GHSSN+C +R+PR + SQS   N   GE+S+ C+ CG PC LR ANTENNRGRK
Sbjct: 440  GHSSNDCPSRVPRSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNRGRK 493


>ref|XP_008227548.1| PREDICTED: DNA topoisomerase 3-alpha [Prunus mume]
          Length = 910

 Score =  501 bits (1290), Expect = e-139
 Identities = 238/353 (67%), Positives = 282/353 (79%)
 Frame = -1

Query: 1061 GQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDAN 882
            GQQF+PT+LTLDSG+TRPPPLLSEADLL+CMDK GIGTDATMHDHIKKLLDR YATKD++
Sbjct: 476  GQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDSS 535

Query: 881  MRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMETC 702
            MRFSPT LGEALVMGYDDMGY+LWKP LRA ME  MKAVSEG KSK +VL+ CL++M+ C
Sbjct: 536  MRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGAKSKAEVLETCLQQMKAC 595

Query: 701  FRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFMV 522
            F DARL K +L +AM +FFERSNR+GG +QH+ GE VRRC  C E+DMVLRQ +DGNFMV
Sbjct: 596  FLDARLNKVKLFEAMAVFFERSNRSGGDEQHVSGEFVRRCGLCQEADMVLRQNRDGNFMV 655

Query: 521  GCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGCV 342
            GCLG+PQCRN VWLPGS+ EAAVT  +C SCTP PV++IQF FRR++IPP++ ANHLGC+
Sbjct: 656  GCLGFPQCRNVVWLPGSVSEAAVTTNVCNSCTPGPVYLIQFTFRRLEIPPDYSANHLGCI 715

Query: 341  GGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQTG 162
            GGCD+ LRQL +ICGTGSR S      RG G  A  NN QRSN  T QG   C++C QTG
Sbjct: 716  GGCDETLRQLTEICGTGSRLS-----ARGRGGPAMPNNVQRSN--TRQG--ACIYCHQTG 766

Query: 161  HSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            HSS  C ++   P++S+ ++ N Q G+ S++C  CGA C LR ANT  NRGRK
Sbjct: 767  HSSGNCPSQSSGPRSSRPQSMNVQSGQVSISCSACGALCALRTANTTTNRGRK 819


>ref|XP_010649355.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Vitis vinifera]
          Length = 916

 Score =  500 bits (1287), Expect = e-139
 Identities = 242/354 (68%), Positives = 279/354 (78%)
 Frame = -1

Query: 1064 FGQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDA 885
            FGQQF+PT+LTLDSG+TRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDR YATKD+
Sbjct: 474  FGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDS 533

Query: 884  NMRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMET 705
            N RFSPT LGEALVMGYDDMGYELWKP LR+ ME  MKAVS G K + +VL  CLE+M+ 
Sbjct: 534  NTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKA 593

Query: 704  CFRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFM 525
            CF DARL K +LL+AM +FFERS+   G +QH  G+VVR+C  C ESDMVLR+K DGNFM
Sbjct: 594  CFLDARLNKVKLLEAMALFFERSS---GDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFM 650

Query: 524  VGCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGC 345
            VGCLGYPQCRN VWLPGSI EAA+T   C  CTP PV+ IQFKFRR++IPPN++ +HLGC
Sbjct: 651  VGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGC 710

Query: 344  VGGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQT 165
            V GCD+ILRQL +ICGTGSR   +    RG G  A+S N QRSN   +     C+HC QT
Sbjct: 711  VCGCDEILRQLTEICGTGSRICSTVPAARGRGSNASSTNAQRSNTRQT----ACIHCSQT 766

Query: 164  GHSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            GHSSN+C +R+PR + SQS   N   GE+S+ C+ CG PC LR ANTENNRGRK
Sbjct: 767  GHSSNDCPSRVPRSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNRGRK 820


>ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
            gi|508700742|gb|EOX92638.1| Topoisomerase 3alpha isoform
            2, partial [Theobroma cacao]
          Length = 845

 Score =  499 bits (1285), Expect = e-138
 Identities = 239/355 (67%), Positives = 286/355 (80%), Gaps = 2/355 (0%)
 Frame = -1

Query: 1061 GQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDAN 882
            GQQF+PTSLTLD+G+TRPPPLLSEADLL+CMDKAGIGTDATMHDHIKKLLDR YATKD+N
Sbjct: 479  GQQFIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSN 538

Query: 881  MRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMETC 702
             RFSPT LGEALVMGYDDMGYELWKP+LR+ ME  MK VS G K K +VL  CL++M+ C
Sbjct: 539  TRFSPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKAC 598

Query: 701  FRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFMV 522
            F DARL K +LL+AM +FFERSN++ G D H+ GEVVR+C  C ES MVL++ +DGNFMV
Sbjct: 599  FLDARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMV 658

Query: 521  GCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGCV 342
            GCLG+PQCRNA+WLPGS+LEAAVT  IC SC P PV++IQFKFR+++IPP F+ANHLGC+
Sbjct: 659  GCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCI 718

Query: 341  GGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQTG 162
            GGCDDILRQL +ICGTGSR S      RG G T  S+N QR+  ++ QG   C++C+QTG
Sbjct: 719  GGCDDILRQLIEICGTGSRMS-----ARGRGPTTTSSNVQRN--SSRQG--ACLYCQQTG 769

Query: 161  HSSNECQTRMPRPQASQSRT--RNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            HSSN+C ++    + S+SRT  +N  +GE SV+C  CG PC LR ANT NNRGRK
Sbjct: 770  HSSNDCPSQFSGSRNSRSRTSSQNGMQGEPSVSCSTCGTPCVLRTANTANNRGRK 824


>ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
            gi|508700741|gb|EOX92637.1| Topoisomerase 3alpha isoform
            1 [Theobroma cacao]
          Length = 914

 Score =  499 bits (1285), Expect = e-138
 Identities = 239/353 (67%), Positives = 285/353 (80%)
 Frame = -1

Query: 1061 GQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDAN 882
            GQQF+PTSLTLD+G+TRPPPLLSEADLL+CMDKAGIGTDATMHDHIKKLLDR YATKD+N
Sbjct: 479  GQQFIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSN 538

Query: 881  MRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMETC 702
             RFSPT LGEALVMGYDDMGYELWKP+LR+ ME  MK VS G K K +VL  CL++M+ C
Sbjct: 539  TRFSPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKAC 598

Query: 701  FRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFMV 522
            F DARL K +LL+AM +FFERSN++ G D H+ GEVVR+C  C ES MVL++ +DGNFMV
Sbjct: 599  FLDARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMV 658

Query: 521  GCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGCV 342
            GCLG+PQCRNA+WLPGS+LEAAVT  IC SC P PV++IQFKFR+++IPP F+ANHLGC+
Sbjct: 659  GCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCI 718

Query: 341  GGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQTG 162
            GGCDDILRQL +ICGTGSR S      RG G T  S+N QR+  ++ QG   C++C+QTG
Sbjct: 719  GGCDDILRQLIEICGTGSRMS-----ARGRGPTTTSSNVQRN--SSRQG--ACLYCQQTG 769

Query: 161  HSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            HSSN+C ++    + S+SRT + Q GE SV+C  CG PC LR ANT NNRGRK
Sbjct: 770  HSSNDCPSQFSGSRNSRSRT-SSQNGEPSVSCSTCGTPCVLRTANTANNRGRK 821


>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Fragaria vesca
            subsp. vesca]
          Length = 908

 Score =  497 bits (1280), Expect = e-138
 Identities = 238/353 (67%), Positives = 276/353 (78%)
 Frame = -1

Query: 1061 GQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDAN 882
            GQQFMPT+LTLDSG+TRPPPLLSEADLL CMDK GIGTDATMHDHIKKLLDR YATKDAN
Sbjct: 476  GQQFMPTTLTLDSGVTRPPPLLSEADLLGCMDKEGIGTDATMHDHIKKLLDRFYATKDAN 535

Query: 881  MRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMETC 702
             RFSPT LGEALVMGYDDMGY+LWKP LRA ME  MKAVSEG KSK +VL+ CL++M+ C
Sbjct: 536  TRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGNKSKAEVLETCLQQMKGC 595

Query: 701  FRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFMV 522
            F DAR  K +L +AM +FFERSNR GG DQH  GE +RRC  C E+DMVLR+ +DGNFMV
Sbjct: 596  FLDARQNKVKLFEAMAVFFERSNRPGGDDQHTSGEFIRRCGLCQEADMVLRKNRDGNFMV 655

Query: 521  GCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGCV 342
            GC+GYPQCRNA+WLPGS+ EA  T  IC SCTP PV +IQF FRR++IPPN+  NHLGC+
Sbjct: 656  GCMGYPQCRNAIWLPGSVSEAVATTNICNSCTPGPVHLIQFTFRRLEIPPNYSTNHLGCI 715

Query: 341  GGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQTG 162
            GGCD+ILRQL +ICGTGSRS+      RG G T +SN  Q +   T QG   C++C Q+G
Sbjct: 716  GGCDEILRQLTEICGTGSRSA-----ARGRGPTTSSNVQQNN---TRQG--ACIYCHQSG 765

Query: 161  HSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            HSS +C ++   P++ + RT N Q GE SV+C  CGAPC LR ANT  NRGRK
Sbjct: 766  HSSGDCPSQSSGPRSVRPRTMNAQSGEISVSCTTCGAPCVLRTANTTQNRGRK 818


>ref|XP_012489371.1| PREDICTED: DNA topoisomerase 3-alpha isoform X4 [Gossypium raimondii]
            gi|763773368|gb|KJB40491.1| hypothetical protein
            B456_007G066700 [Gossypium raimondii]
            gi|763773370|gb|KJB40493.1| hypothetical protein
            B456_007G066700 [Gossypium raimondii]
          Length = 909

 Score =  497 bits (1279), Expect = e-138
 Identities = 240/353 (67%), Positives = 281/353 (79%)
 Frame = -1

Query: 1061 GQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDAN 882
            GQQF+P SLTLD+G+TRPPPLLSEADLL+CMDKAGIGTDATMHDHIKKLLDR YATKD+N
Sbjct: 479  GQQFVPASLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSN 538

Query: 881  MRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMETC 702
             RFSPT LGEALVMGYDDMGYELWKP+LR+ ME  MK VS G KSK +VL  CL++M+ C
Sbjct: 539  TRFSPTNLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKSKDEVLATCLQQMKAC 598

Query: 701  FRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFMV 522
            F DARL K +LL+AM +FFERSNRA G D +  GEVVR+C  C ES MVL++ +DGNFMV
Sbjct: 599  FFDARLNKVKLLEAMAVFFERSNRAVGGDNYAAGEVVRQCDLCQESSMVLKKNRDGNFMV 658

Query: 521  GCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGCV 342
            GC G+PQCRNA+WLPGSILEAAVT  IC+SC P PV++IQFKFR+++IPP F+ANHLGC+
Sbjct: 659  GCSGFPQCRNAIWLPGSILEAAVTSNICSSCNPGPVYLIQFKFRQIEIPPGFNANHLGCI 718

Query: 341  GGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQTG 162
            GGCDD LRQL +ICGTGSR S      RG G T  S+N QRS    S    +C+HC+QTG
Sbjct: 719  GGCDDTLRQLIEICGTGSRMS-----ARGRGPTTTSSNGQRS----SNRHNSCIHCQQTG 769

Query: 161  HSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            HSSN+C ++  R + SQS T N + G+ SV+C  CG PC LR ANT NNRGRK
Sbjct: 770  HSSNDCPSQFSRSRNSQSHT-NSENGDPSVSCSTCGMPCVLRTANTANNRGRK 821


>ref|XP_010270299.1| PREDICTED: DNA topoisomerase 3-alpha [Nelumbo nucifera]
          Length = 921

 Score =  496 bits (1277), Expect = e-137
 Identities = 240/353 (67%), Positives = 282/353 (79%)
 Frame = -1

Query: 1061 GQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDAN 882
            GQQF+PT+LTLDSG+TRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKD+N
Sbjct: 481  GQQFIPTALTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDSN 540

Query: 881  MRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMETC 702
             RFSPT LGEALVMGYDDMGYELWKP LR+ ME  MKAVS G K K +VL+ CL++M+ C
Sbjct: 541  TRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKAEVLETCLQQMKAC 600

Query: 701  FRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFMV 522
            F DARL K +LL+AM IFFER NR G  +Q    ++VR C AC ES+MVL++K DGNFMV
Sbjct: 601  FLDARLNKVKLLEAMAIFFERCNRPGTNEQQGAVDIVRPCSACQESNMVLKRKPDGNFMV 660

Query: 521  GCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGCV 342
            GCLG+PQCRN VWLPGSI  A VT  IC SC+P PVF IQFKFRR++IP ++D +HLGC+
Sbjct: 661  GCLGFPQCRNVVWLPGSISTATVTNHICDSCSPGPVFKIQFKFRRLEIPSDYDVDHLGCI 720

Query: 341  GGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQTG 162
            GGCD+ L+QL +ICGTGSR+  S++  RG G TA+S N QR   +T QG   C HCRQTG
Sbjct: 721  GGCDETLKQLTEICGTGSRNPPSTS-ARGRGTTASSTNAQR--VSTMQG--VCEHCRQTG 775

Query: 161  HSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            HSSN+C T++ R Q+ + R RN QRG +SV+C+ CG  C LR ANT NNRGRK
Sbjct: 776  HSSNDCPTQVSRRQSVRPRGRNSQRGGSSVSCNSCGTLCALRTANTANNRGRK 828


>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score =  495 bits (1275), Expect = e-137
 Identities = 244/357 (68%), Positives = 279/357 (78%), Gaps = 3/357 (0%)
 Frame = -1

Query: 1064 FGQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDA 885
            FGQQF PT+LTLDSG+TRPPPLLSEADLL CMDKAGIGTDATMHDHIKKLLDR YA KD+
Sbjct: 484  FGQQFTPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKDS 543

Query: 884  NMRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMET 705
            N RFSPT LGEALVMGYDDMGYELWKP LRA ME  MKAVS G K K +VL+ CL++M+ 
Sbjct: 544  NTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSIGTKRKAEVLETCLQQMKA 603

Query: 704  CFRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFM 525
            CF DAR  K +LL+AM IFFERSNR+ G +Q   G+VVRRC  C ESDMVLRQK DGNFM
Sbjct: 604  CFSDARTNKGKLLEAMAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQKPDGNFM 663

Query: 524  VGCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGC 345
            VGCLGYPQCRN VWLPGS+ EA+VT   CTSC+P PVF IQFKFRR++IPPN+   HLGC
Sbjct: 664  VGCLGYPQCRNVVWLPGSVSEASVTENTCTSCSPGPVFKIQFKFRRLEIPPNYSVQHLGC 723

Query: 344  VGGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQT 165
            +GGCDDILRQL +ICGTGSR++ S+   RG G   AS++ QR N   S+   +C +CRQT
Sbjct: 724  IGGCDDILRQLVEICGTGSRNN-SNTSGRGRGNPTASSSAQRGN---SRAQSSCAYCRQT 779

Query: 164  GHSSNECQTRMPRPQASQSRTRNPQ---RGETSVTCDKCGAPCPLREANTENNRGRK 3
            GH SN+C +     QAS+ RT   Q    GE+S+ C+ CGAPC LR ANT NNRGRK
Sbjct: 780  GHLSNDCPS-----QASRGRTARAQEVDNGESSIPCNSCGAPCILRTANTANNRGRK 831


>ref|XP_011465095.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Fragaria vesca
            subsp. vesca]
          Length = 909

 Score =  493 bits (1268), Expect = e-136
 Identities = 238/354 (67%), Positives = 276/354 (77%), Gaps = 1/354 (0%)
 Frame = -1

Query: 1061 GQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDAN 882
            GQQFMPT+LTLDSG+TRPPPLLSEADLL CMDK GIGTDATMHDHIKKLLDR YATKDAN
Sbjct: 476  GQQFMPTTLTLDSGVTRPPPLLSEADLLGCMDKEGIGTDATMHDHIKKLLDRFYATKDAN 535

Query: 881  MRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMETC 702
             RFSPT LGEALVMGYDDMGY+LWKP LRA ME  MKAVSEG KSK +VL+ CL++M+ C
Sbjct: 536  TRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGNKSKAEVLETCLQQMKGC 595

Query: 701  FRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFMV 522
            F DAR  K +L +AM +FFERSNR GG DQH  GE +RRC  C E+DMVLR+ +DGNFMV
Sbjct: 596  FLDARQNKVKLFEAMAVFFERSNRPGGDDQHTSGEFIRRCGLCQEADMVLRKNRDGNFMV 655

Query: 521  GCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGCV 342
            GC+GYPQCRNA+WLPGS+ EA  T  IC SCTP PV +IQF FRR++IPPN+  NHLGC+
Sbjct: 656  GCMGYPQCRNAIWLPGSVSEAVATTNICNSCTPGPVHLIQFTFRRLEIPPNYSTNHLGCI 715

Query: 341  GGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQTG 162
            GGCD+ILRQL +ICGTGSRS+      RG G T +SN  Q +   T QG   C++C Q+G
Sbjct: 716  GGCDEILRQLTEICGTGSRSA-----ARGRGPTTSSNVQQNN---TRQG--ACIYCHQSG 765

Query: 161  HSSNECQTRMPRPQASQSRTRNPQ-RGETSVTCDKCGAPCPLREANTENNRGRK 3
            HSS +C ++   P++ + RT N Q  GE SV+C  CGAPC LR ANT  NRGRK
Sbjct: 766  HSSGDCPSQSSGPRSVRPRTMNAQSAGEISVSCTTCGAPCVLRTANTTQNRGRK 819


>ref|XP_009622051.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Nicotiana
            tomentosiformis]
          Length = 853

 Score =  491 bits (1265), Expect = e-136
 Identities = 238/354 (67%), Positives = 278/354 (78%)
 Frame = -1

Query: 1064 FGQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDA 885
            FGQQF+PTSLTLDSG+TRPPPLLSEADLL CMDKAGIGTDATMHDHIKKLLDR YA KD+
Sbjct: 426  FGQQFIPTSLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKDS 485

Query: 884  NMRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMET 705
            + RFSPT LGEALVMGYDDMGYELWKP LRA ME  MKAVS G K K +VL+ CL++M+ 
Sbjct: 486  STRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSMGTKRKTEVLETCLQQMKA 545

Query: 704  CFRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFM 525
            CF DAR  K +L +AM IFFERSNR+ G +Q   G+VVRRC  C ESDMVLRQK DGNFM
Sbjct: 546  CFLDARANKGKLFEAMAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQKPDGNFM 605

Query: 524  VGCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGC 345
            VGCLGYPQCRN VWLPGS+ EA+VT   CTSC P PV+ IQF+FRR++IPPN+ A H+GC
Sbjct: 606  VGCLGYPQCRNVVWLPGSLSEASVTENTCTSCGPGPVYKIQFRFRRLEIPPNYSAQHIGC 665

Query: 344  VGGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQT 165
            +GGCDDILRQL +ICGTGSRSS S+   RG G   AS++ QR N   S+   +C +CRQT
Sbjct: 666  IGGCDDILRQLVEICGTGSRSS-SNTFGRGRGNPRASSSAQRGN---SRAQGSCAYCRQT 721

Query: 164  GHSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            GH SN+C ++  R + ++S+  + Q GE  + C+ CG PC LR ANT NNRGRK
Sbjct: 722  GHLSNDCPSQASRSRTARSQEVDLQNGEPLIPCNSCGEPCNLRTANTANNRGRK 775


>ref|XP_009622049.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Nicotiana
            tomentosiformis]
          Length = 913

 Score =  491 bits (1265), Expect = e-136
 Identities = 238/354 (67%), Positives = 278/354 (78%)
 Frame = -1

Query: 1064 FGQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDA 885
            FGQQF+PTSLTLDSG+TRPPPLLSEADLL CMDKAGIGTDATMHDHIKKLLDR YA KD+
Sbjct: 486  FGQQFIPTSLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKDS 545

Query: 884  NMRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMET 705
            + RFSPT LGEALVMGYDDMGYELWKP LRA ME  MKAVS G K K +VL+ CL++M+ 
Sbjct: 546  STRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSMGTKRKTEVLETCLQQMKA 605

Query: 704  CFRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFM 525
            CF DAR  K +L +AM IFFERSNR+ G +Q   G+VVRRC  C ESDMVLRQK DGNFM
Sbjct: 606  CFLDARANKGKLFEAMAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQKPDGNFM 665

Query: 524  VGCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGC 345
            VGCLGYPQCRN VWLPGS+ EA+VT   CTSC P PV+ IQF+FRR++IPPN+ A H+GC
Sbjct: 666  VGCLGYPQCRNVVWLPGSLSEASVTENTCTSCGPGPVYKIQFRFRRLEIPPNYSAQHIGC 725

Query: 344  VGGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQT 165
            +GGCDDILRQL +ICGTGSRSS S+   RG G   AS++ QR N   S+   +C +CRQT
Sbjct: 726  IGGCDDILRQLVEICGTGSRSS-SNTFGRGRGNPRASSSAQRGN---SRAQGSCAYCRQT 781

Query: 164  GHSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            GH SN+C ++  R + ++S+  + Q GE  + C+ CG PC LR ANT NNRGRK
Sbjct: 782  GHLSNDCPSQASRSRTARSQEVDLQNGEPLIPCNSCGEPCNLRTANTANNRGRK 835


>ref|XP_012489370.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Gossypium raimondii]
          Length = 917

 Score =  489 bits (1260), Expect = e-135
 Identities = 240/361 (66%), Positives = 281/361 (77%), Gaps = 8/361 (2%)
 Frame = -1

Query: 1061 GQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDAN 882
            GQQF+P SLTLD+G+TRPPPLLSEADLL+CMDKAGIGTDATMHDHIKKLLDR YATKD+N
Sbjct: 479  GQQFVPASLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSN 538

Query: 881  MRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMETC 702
             RFSPT LGEALVMGYDDMGYELWKP+LR+ ME  MK VS G KSK +VL  CL++M+ C
Sbjct: 539  TRFSPTNLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKSKDEVLATCLQQMKAC 598

Query: 701  FRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFMV 522
            F DARL K +LL+AM +FFERSNRA G D +  GEVVR+C  C ES MVL++ +DGNFMV
Sbjct: 599  FFDARLNKVKLLEAMAVFFERSNRAVGGDNYAAGEVVRQCDLCQESSMVLKKNRDGNFMV 658

Query: 521  GCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLG-- 348
            GC G+PQCRNA+WLPGSILEAAVT  IC+SC P PV++IQFKFR+++IPP F+ANHLG  
Sbjct: 659  GCSGFPQCRNAIWLPGSILEAAVTSNICSSCNPGPVYLIQFKFRQIEIPPGFNANHLGKD 718

Query: 347  ------CVGGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVT 186
                  C+GGCDD LRQL +ICGTGSR S      RG G T  S+N QRS    S    +
Sbjct: 719  IGPMTRCIGGCDDTLRQLIEICGTGSRMS-----ARGRGPTTTSSNGQRS----SNRHNS 769

Query: 185  CMHCRQTGHSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGR 6
            C+HC+QTGHSSN+C ++  R + SQS T N + G+ SV+C  CG PC LR ANT NNRGR
Sbjct: 770  CIHCQQTGHSSNDCPSQFSRSRNSQSHT-NSENGDPSVSCSTCGMPCVLRTANTANNRGR 828

Query: 5    K 3
            K
Sbjct: 829  K 829


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223533243|gb|EEF34998.1| prokaryotic DNA
            topoisomerase, putative, partial [Ricinus communis]
          Length = 833

 Score =  488 bits (1257), Expect = e-135
 Identities = 229/353 (64%), Positives = 274/353 (77%)
 Frame = -1

Query: 1061 GQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDAN 882
            GQQFMPT+LTLDSG+TRPPPLLSE+DLL+CMDKAGIGTDATMHDHIKKLLDR YATKDAN
Sbjct: 478  GQQFMPTTLTLDSGVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDAN 537

Query: 881  MRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMETC 702
             RFSPT LGEALVMGYDDMGYELWKP+LR+ ME  MK VS G KSK +VL+ CL++M+TC
Sbjct: 538  TRFSPTNLGEALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHKSKAEVLETCLQQMKTC 597

Query: 701  FRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFMV 522
            F DAR+ K +LL+AM +FFERS+R+ G D H   ++VR+C  C E++MVLR+ +DGNFMV
Sbjct: 598  FLDARINKVKLLEAMAVFFERSDRSSGNDNHATVDIVRQCGLCRETNMVLRRNRDGNFMV 657

Query: 521  GCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGCV 342
            GC+GYPQCRNA+WLPG I+EA VT  +C  CTP PV++IQFKFR+++IPP F  NHLGC+
Sbjct: 658  GCMGYPQCRNAIWLPGPIIEATVTTSVCNYCTPGPVYLIQFKFRQLEIPPGFSVNHLGCI 717

Query: 341  GGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQTG 162
            GGCDD LRQL DICGTGSR        R        +N+Q+SN   +    TC+HC QTG
Sbjct: 718  GGCDDTLRQLTDICGTGSR-----VQARARAPNTTPSNSQQSNTRFA----TCVHCHQTG 768

Query: 161  HSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            H+S +C  ++   +  QSR  N Q GE+SVTC  CG PC LR ANT NNRGRK
Sbjct: 769  HASIDCPLQLSGSRRVQSRGTNEQMGESSVTCGTCGTPCALRTANTANNRGRK 821


>ref|XP_012489369.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Gossypium raimondii]
            gi|763773367|gb|KJB40490.1| hypothetical protein
            B456_007G066700 [Gossypium raimondii]
            gi|763773369|gb|KJB40492.1| hypothetical protein
            B456_007G066700 [Gossypium raimondii]
          Length = 928

 Score =  485 bits (1249), Expect = e-134
 Identities = 240/372 (64%), Positives = 281/372 (75%), Gaps = 19/372 (5%)
 Frame = -1

Query: 1061 GQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDAN 882
            GQQF+P SLTLD+G+TRPPPLLSEADLL+CMDKAGIGTDATMHDHIKKLLDR YATKD+N
Sbjct: 479  GQQFVPASLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSN 538

Query: 881  MRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMETC 702
             RFSPT LGEALVMGYDDMGYELWKP+LR+ ME  MK VS G KSK +VL  CL++M+ C
Sbjct: 539  TRFSPTNLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKSKDEVLATCLQQMKAC 598

Query: 701  FRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFMV 522
            F DARL K +LL+AM +FFERSNRA G D +  GEVVR+C  C ES MVL++ +DGNFMV
Sbjct: 599  FFDARLNKVKLLEAMAVFFERSNRAVGGDNYAAGEVVRQCDLCQESSMVLKKNRDGNFMV 658

Query: 521  GCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHL--- 351
            GC G+PQCRNA+WLPGSILEAAVT  IC+SC P PV++IQFKFR+++IPP F+ANHL   
Sbjct: 659  GCSGFPQCRNAIWLPGSILEAAVTSNICSSCNPGPVYLIQFKFRQIEIPPGFNANHLVLL 718

Query: 350  ----------------GCVGGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQR 219
                            GC+GGCDD LRQL +ICGTGSR S      RG G T  S+N QR
Sbjct: 719  SHYFPRCPILMKFSSYGCIGGCDDTLRQLIEICGTGSRMS-----ARGRGPTTTSSNGQR 773

Query: 218  SNATTSQGPVTCMHCRQTGHSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPL 39
            S    S    +C+HC+QTGHSSN+C ++  R + SQS T N + G+ SV+C  CG PC L
Sbjct: 774  S----SNRHNSCIHCQQTGHSSNDCPSQFSRSRNSQSHT-NSENGDPSVSCSTCGMPCVL 828

Query: 38   REANTENNRGRK 3
            R ANT NNRGRK
Sbjct: 829  RTANTANNRGRK 840


>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
          Length = 940

 Score =  485 bits (1249), Expect = e-134
 Identities = 233/353 (66%), Positives = 277/353 (78%)
 Frame = -1

Query: 1061 GQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDAN 882
            GQQF+PT+LTLDSG+TRPPPLLSEADLL+CMDKAGIGTDATMHDHIKKLLDR YA KDAN
Sbjct: 511  GQQFIPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDAN 570

Query: 881  MRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMETC 702
             RF+PT +GEALVMGYDDMGYELWKP+LR+ ME  MK VS G KSK DVL +CL++M+ C
Sbjct: 571  TRFAPTNIGEALVMGYDDMGYELWKPNLRSMMESDMKEVSVGNKSKADVLANCLQQMKAC 630

Query: 701  FRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFMV 522
            F DARLKK +LL+AMGIFFERS   GG DQ   GEVVR+C  C ES+MVL++ +DGN MV
Sbjct: 631  FLDARLKKVKLLEAMGIFFERS---GGEDQQAAGEVVRQCGICQESNMVLKKSRDGNLMV 687

Query: 521  GCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGCV 342
            GCL +PQCRNAVWLPGS+ EAAVT   C SCTP PV++IQFKFR+ +IPP F+ NHLGC+
Sbjct: 688  GCLAFPQCRNAVWLPGSVSEAAVTTNTCNSCTPGPVYLIQFKFRQHEIPPGFNVNHLGCI 747

Query: 341  GGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQTG 162
            GGCD+ LRQL +ICGTGSR      P RG G TA+SNN Q+SN         C++C+Q G
Sbjct: 748  GGCDETLRQLIEICGTGSR-----IPARGRGPTASSNNGQQSNHRQR----ACIYCQQMG 798

Query: 161  HSSNECQTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            HSS++C ++    + +++   NPQ GE+S+ C  CG PC LR ANT NNRGRK
Sbjct: 799  HSSSDCPSQFSGSRNARANGMNPQSGESSIQCTTCGTPCVLRTANTANNRGRK 851


>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha [Cicer arietinum]
          Length = 920

 Score =  484 bits (1246), Expect = e-134
 Identities = 233/355 (65%), Positives = 275/355 (77%), Gaps = 2/355 (0%)
 Frame = -1

Query: 1061 GQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDAN 882
            GQQF+PT+LTLDSG+TRPPP LSEADLL+CMDK GIGTDATMHDHIKKLLDR YATKDA+
Sbjct: 480  GQQFIPTTLTLDSGVTRPPPPLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDAS 539

Query: 881  MRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMETC 702
            MRF+PT LGEALVMGYDDMGY+LWKP LRA ME  MK+VSEG KSK +VL   L++M+ C
Sbjct: 540  MRFTPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKSVSEGTKSKTEVLDTSLQQMKAC 599

Query: 701  FRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFMV 522
            F DARL K +LL+AMGIFFERSNR+GG +Q+  GEVVRRC  C ESDMVL++ +DGNFMV
Sbjct: 600  FLDARLNKVKLLEAMGIFFERSNRSGGEEQNAIGEVVRRCGLCRESDMVLKKSRDGNFMV 659

Query: 521  GCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGCV 342
            GCLG+PQCRNAVWLPGS+ EA VT   C++CTP PV+ IQFKFR+++IPPN+D NHLGC+
Sbjct: 660  GCLGFPQCRNAVWLPGSVSEAVVTTNTCSNCTPGPVYRIQFKFRQLEIPPNYDVNHLGCI 719

Query: 341  GGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQTG 162
            GGCD+IL QL +ICGTG R      P R  G T ++ N   +N   +     CM+C++TG
Sbjct: 720  GGCDEILTQLTEICGTGPR-----MPARPRGPTTSTGNAHHTNPRQA----VCMNCQETG 770

Query: 161  HSSNEC--QTRMPRPQASQSRTRNPQRGETSVTCDKCGAPCPLREANTENNRGRK 3
            HSSN+C  QT   R         N Q GE SV+C+ CG PC LR ANT NNRGRK
Sbjct: 771  HSSNDCPSQTLRSRNARQHGNVMNQQSGEASVSCNSCGTPCVLRTANTANNRGRK 825


>ref|XP_010320983.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Solanum
            lycopersicum]
          Length = 831

 Score =  483 bits (1243), Expect = e-133
 Identities = 239/357 (66%), Positives = 274/357 (76%), Gaps = 3/357 (0%)
 Frame = -1

Query: 1064 FGQQFMPTSLTLDSGITRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDA 885
            FGQQF PT+LTLDSG+ RPPPLLSEADLL CMDKAGIGTDATMHDHIKKLLDR YA KD+
Sbjct: 400  FGQQFTPTTLTLDSGVIRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKDS 459

Query: 884  NMRFSPTTLGEALVMGYDDMGYELWKPDLRAKMELGMKAVSEGRKSKIDVLKDCLEEMET 705
            N RFSPT LGEALVMGYDDMGYELWKP LRA ME  MKAVS G K K +VL+ CL++M+ 
Sbjct: 460  NTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSTGTKRKAEVLETCLQQMKA 519

Query: 704  CFRDARLKKEELLKAMGIFFERSNRAGGVDQHIGGEVVRRCPACNESDMVLRQKQDGNFM 525
            CF DAR  KE+LL+AM IFFERSNR+   +Q   G VVRRC  C ESDMVLRQK DGNFM
Sbjct: 520  CFSDARTNKEKLLEAMAIFFERSNRSSSGEQQAVGAVVRRCGLCLESDMVLRQKPDGNFM 579

Query: 524  VGCLGYPQCRNAVWLPGSILEAAVTPQICTSCTPAPVFMIQFKFRRMDIPPNFDANHLGC 345
            VGCLGYPQCRN VWLPGS+ EA+VT   C +C+P PVF IQFKFR+ +IPP++   HLGC
Sbjct: 580  VGCLGYPQCRNVVWLPGSVSEASVTENTCITCSPGPVFKIQFKFRQQEIPPDYSVQHLGC 639

Query: 344  VGGCDDILRQLRDICGTGSRSSVSSAPTRGNGRTAASNNTQRSNATTSQGPVTCMHCRQT 165
            +GGCDDILRQL +ICGTGSR+S S+   RG G   A ++ QR N   S+   +C +CRQT
Sbjct: 640  IGGCDDILRQLVEICGTGSRNS-SNPSGRGRGNPTAFSSAQRDN---SRAQSSCAYCRQT 695

Query: 164  GHSSNECQTRMPRPQASQSRTRNPQ---RGETSVTCDKCGAPCPLREANTENNRGRK 3
            GH SN+C +     QAS+ RT   Q    GE+S+ C+ CGAPC LR ANT NNRGRK
Sbjct: 696  GHLSNDCPS-----QASRDRTARAQEVDNGESSMPCNSCGAPCILRTANTANNRGRK 747