BLASTX nr result
ID: Papaver29_contig00035684
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00035684
(491 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I sub... 76 9e-12
ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I sub... 74 6e-11
gb|AIO05696.1| putative RNA polymerase AI large subunit, partial... 72 1e-10
ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I sub... 72 1e-10
ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I sub... 72 2e-10
gb|ACJ63312.1| RNA polymerase I large subunit [Ceratophyllum dem... 71 4e-10
gb|ACJ63313.1| RNA polymerase I large subunit [Drimys winteri] 70 5e-10
ref|XP_011625527.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 66 9e-09
gb|ERN11762.1| hypothetical protein AMTR_s00022p00245030 [Ambore... 66 9e-09
ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub... 64 3e-08
gb|ACJ63315.1| RNA polymerase I large subunit [Liriodendron tuli... 64 4e-08
gb|AAS55440.1| RNA polymerase I largest subunit [Amborella trich... 63 8e-08
ref|XP_013663557.1| PREDICTED: DNA-directed RNA polymerase I sub... 62 2e-07
ref|XP_013672001.1| PREDICTED: DNA-directed RNA polymerase I sub... 62 2e-07
ref|XP_013604500.1| PREDICTED: DNA-directed RNA polymerase I sub... 62 2e-07
ref|XP_009116470.1| PREDICTED: DNA-directed RNA polymerase I sub... 62 2e-07
emb|CDX72007.1| BnaC08g28670D [Brassica napus] 62 2e-07
emb|CDY06084.1| BnaA09g36960D [Brassica napus] 62 2e-07
ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I sub... 62 2e-07
ref|XP_009104070.1| PREDICTED: DNA-directed RNA polymerase I sub... 62 2e-07
>ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
acuminata subsp. malaccensis]
Length = 1640
Score = 76.3 bits (186), Expect = 9e-12
Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Frame = -1
Query: 224 DALLMKFNTY*GHARAS*REN-TSSLLKKQRASL-QLRKKDFLKLMKLKYFISLAHPGEL 51
D L K N Y S R+N T +LKKQ++S Q+ KKDF+KLMKLKY SLA PGE
Sbjct: 1063 DTSLAKSNAYIRELPCSLRDNATDFVLKKQKSSPHQINKKDFMKLMKLKYLSSLAEPGEA 1122
Query: 50 VGVLAAESVGEPSSEM 3
VGV+AA+SVGEPS++M
Sbjct: 1123 VGVVAAQSVGEPSTQM 1138
>ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Elaeis
guineensis]
Length = 1674
Score = 73.6 bits (179), Expect = 6e-11
Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Frame = -1
Query: 263 QELLMSTLGGGCEDALLMKFNTY*GHARAS*RENTSS---LLKKQRASL-QLRKKDFLKL 96
Q +++ L EDA L K N Y REN ++ L K + SL Q+R+KD +KL
Sbjct: 1072 QTVVLDRLSSQLEDAHLSKSNGYLKELPYLLRENATTFARLSKNHQGSLRQIRRKDLMKL 1131
Query: 95 MKLKYFISLAHPGELVGVLAAESVGEPSSEM 3
MKLKY SLA PGE VGV+AA+SVGEPS++M
Sbjct: 1132 MKLKYLSSLAEPGEPVGVIAAQSVGEPSTQM 1162
>gb|AIO05696.1| putative RNA polymerase AI large subunit, partial [Cocos nucifera]
Length = 1669
Score = 72.4 bits (176), Expect = 1e-10
Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Frame = -1
Query: 263 QELLMSTLGGGCEDALLMKFNTY*GHARAS*RENTSS---LLKKQRASL-QLRKKDFLKL 96
Q +++ L EDA L K N Y REN ++ L K + SL Q+R++D +KL
Sbjct: 1068 QTVVLDRLSSQLEDAHLSKSNGYIKELPYLLRENATTFARLSKNHQGSLHQIRRRDLMKL 1127
Query: 95 MKLKYFISLAHPGELVGVLAAESVGEPSSEM 3
MKLKY SLA PGE VGV+AA+SVGEPS++M
Sbjct: 1128 MKLKYMSSLAEPGEPVGVIAAQSVGEPSTQM 1158
>ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Phoenix
dactylifera]
Length = 1665
Score = 72.4 bits (176), Expect = 1e-10
Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Frame = -1
Query: 263 QELLMSTLGGGCEDALLMKFNTY*GHARAS*RENTSS---LLKKQRASL-QLRKKDFLKL 96
Q +++ L EDA L K N Y REN ++ L K + SL Q+++KD +KL
Sbjct: 1062 QTVVLDRLSSQLEDAHLSKSNGYIKELPYLLRENATTFARLSKNHQGSLHQIKRKDLMKL 1121
Query: 95 MKLKYFISLAHPGELVGVLAAESVGEPSSEM 3
MKLKY SLA PGE VGV+AA+SVGEPS++M
Sbjct: 1122 MKLKYLSSLAEPGEPVGVIAAQSVGEPSTQM 1152
>ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
acuminata subsp. malaccensis]
Length = 1641
Score = 72.0 bits (175), Expect = 2e-10
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = -1
Query: 263 QELLMSTLGGGCEDALLMKFNTY*GHARAS*RENTSSLLKKQRASL--QLRKKDFLKLMK 90
Q++++ D L K N Y S R+ + + K + S Q+ +KDF+KLMK
Sbjct: 1046 QKVVLQKFSDQISDTSLAKSNAYIRELPCSLRDKATDFILKNQKSFPHQINQKDFMKLMK 1105
Query: 89 LKYFISLAHPGELVGVLAAESVGEPSSEM 3
LKY SLA PGE VGV+AA+SVGEPS++M
Sbjct: 1106 LKYLSSLAEPGEAVGVVAAQSVGEPSTQM 1134
>gb|ACJ63312.1| RNA polymerase I large subunit [Ceratophyllum demersum]
Length = 538
Score = 70.9 bits (172), Expect = 4e-10
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = -1
Query: 263 QELLMSTLGGGCEDALLMKFNTY*GHARAS*RENTSSLL----KKQRASLQLRKKDFLKL 96
Q+++ L G +DA L F+ Y G + E L K++R SL L KK F+KL
Sbjct: 451 QDVVQEKLCGKNKDARLHHFHGYLGAFPSGLEEKAKDYLNGLSKEKRTSLGLSKKGFMKL 510
Query: 95 MKLKYFISLAHPGELVGVLAAESVGEPS 12
MKLKY SLA PGE VG++AA+SVGEPS
Sbjct: 511 MKLKYLTSLAQPGEPVGIIAAQSVGEPS 538
>gb|ACJ63313.1| RNA polymerase I large subunit [Drimys winteri]
Length = 539
Score = 70.5 bits (171), Expect = 5e-10
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Frame = -1
Query: 263 QELLMSTLGGGCEDALLMKFNTY*GHARAS*RENTS----SLLKKQRASLQLRK-KDFLK 99
Q +++ L G EDA L K + Y + SL KK+R SL LRK K+F+
Sbjct: 451 QNIVLEKLSGQLEDAHLSKSDAYIKELPNALERKAKDFFCSLTKKKRHSLHLRKQKNFMN 510
Query: 98 LMKLKYFISLAHPGELVGVLAAESVGEPS 12
LMKLKY SLA PGE VGV+AA+SVGEPS
Sbjct: 511 LMKLKYLSSLAQPGEAVGVIAAQSVGEPS 539
>ref|XP_011625527.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
rpa1 [Amborella trichopoda]
Length = 1605
Score = 66.2 bits (160), Expect = 9e-09
Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 5/80 (6%)
Frame = -1
Query: 227 EDALLMKFNTY*GHARAS*RENTSSLL----KKQRASLQLRK-KDFLKLMKLKYFISLAH 63
EDAL ++++Y + E + + KK+R SL LRK K F L+KLKYF SLA
Sbjct: 1011 EDALPSEYDSYIKDLPDALEEKMNKFIEKLSKKKRDSLHLRKLKHFRNLLKLKYFSSLAQ 1070
Query: 62 PGELVGVLAAESVGEPSSEM 3
PGE VGV+AA+S+GEPS++M
Sbjct: 1071 PGEAVGVIAAQSIGEPSTQM 1090
>gb|ERN11762.1| hypothetical protein AMTR_s00022p00245030 [Amborella trichopoda]
Length = 1600
Score = 66.2 bits (160), Expect = 9e-09
Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 5/80 (6%)
Frame = -1
Query: 227 EDALLMKFNTY*GHARAS*RENTSSLL----KKQRASLQLRK-KDFLKLMKLKYFISLAH 63
EDAL ++++Y + E + + KK+R SL LRK K F L+KLKYF SLA
Sbjct: 1006 EDALPSEYDSYIKDLPDALEEKMNKFIEKLSKKKRDSLHLRKLKHFRNLLKLKYFSSLAQ 1065
Query: 62 PGELVGVLAAESVGEPSSEM 3
PGE VGV+AA+S+GEPS++M
Sbjct: 1066 PGEAVGVIAAQSIGEPSTQM 1085
>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nelumbo
nucifera]
Length = 1676
Score = 64.3 bits (155), Expect = 3e-08
Identities = 34/57 (59%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Frame = -1
Query: 170 RENTSSLLKKQRASLQLRK-KDFLKLMKLKYFISLAHPGELVGVLAAESVGEPSSEM 3
++ +L KK+ SL LRK KDF+KLM+ KY SLA PGE VGV+AA+SVGEPS++M
Sbjct: 1122 KDYIDTLSKKKLKSLNLRKRKDFMKLMRSKYISSLAQPGEPVGVVAAQSVGEPSTQM 1178
>gb|ACJ63315.1| RNA polymerase I large subunit [Liriodendron tulipifera]
Length = 558
Score = 63.9 bits (154), Expect = 4e-08
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = -1
Query: 263 QELLMSTLGGGCEDALLMKFNTY*GHARAS*RENTSSLLKKQRASLQLRK-KDFLKLMKL 87
Q +++ G ED N R ++ +L KK+R S LRK K+F+ L+KL
Sbjct: 474 QRIILEKHSGQHEDPSNSYINELPDALRGKAKDFIGTLSKKKRDSFHLRKQKNFMNLVKL 533
Query: 86 KYFISLAHPGELVGVLAAESVGEPS 12
KY SLA PGE VGVLAA+S+GEPS
Sbjct: 534 KYLSSLAQPGEAVGVLAAQSIGEPS 558
>gb|AAS55440.1| RNA polymerase I largest subunit [Amborella trichopoda]
Length = 542
Score = 63.2 bits (152), Expect = 8e-08
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Frame = -1
Query: 227 EDALLMKFNTY*GHARAS*RENTSSLL----KKQRASLQLRK-KDFLKLMKLKYFISLAH 63
EDAL ++++Y + E + + KK+R SL LRK K F L+KLKYF SLA
Sbjct: 466 EDALPSEYDSYIKDLPDALEEKMNKFIEKLSKKKRDSLHLRKLKHFRNLLKLKYFSSLAQ 525
Query: 62 PGELVGVLAAESVGEPS 12
PGE VGV+AA+S+GEPS
Sbjct: 526 PGEAVGVIAAQSIGEPS 542
>ref|XP_013663557.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like isoform X1
[Brassica napus] gi|923714914|ref|XP_013663558.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa1-like isoform X2 [Brassica napus]
gi|923714919|ref|XP_013663559.1| PREDICTED: DNA-directed
RNA polymerase I subunit rpa1-like isoform X3 [Brassica
napus]
Length = 1643
Score = 62.0 bits (149), Expect = 2e-07
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = -1
Query: 149 LKKQRASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVGEPSSEM 3
+K++ AS +R++D LKL+K K+F SLA PGE VGVLAA+SVGEPS++M
Sbjct: 1094 MKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQM 1142
>ref|XP_013672001.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Brassica
napus]
Length = 1643
Score = 62.0 bits (149), Expect = 2e-07
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = -1
Query: 149 LKKQRASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVGEPSSEM 3
+K++ AS +R++D LKL+K K+F SLA PGE VGVLAA+SVGEPS++M
Sbjct: 1094 MKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQM 1142
>ref|XP_013604500.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Brassica
oleracea var. oleracea]
Length = 1643
Score = 62.0 bits (149), Expect = 2e-07
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = -1
Query: 149 LKKQRASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVGEPSSEM 3
+K++ AS +R++D LKL+K K+F SLA PGE VGVLAA+SVGEPS++M
Sbjct: 1094 MKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQM 1142
>ref|XP_009116470.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Brassica rapa]
Length = 1640
Score = 62.0 bits (149), Expect = 2e-07
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = -1
Query: 149 LKKQRASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVGEPSSEM 3
+K++ AS +R++D LKL+K K+F SLA PGE VGVLAA+SVGEPS++M
Sbjct: 1094 MKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQM 1142
>emb|CDX72007.1| BnaC08g28670D [Brassica napus]
Length = 1535
Score = 62.0 bits (149), Expect = 2e-07
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = -1
Query: 149 LKKQRASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVGEPSSEM 3
+K++ AS +R++D LKL+K K+F SLA PGE VGVLAA+SVGEPS++M
Sbjct: 1094 MKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQM 1142
>emb|CDY06084.1| BnaA09g36960D [Brassica napus]
Length = 1521
Score = 62.0 bits (149), Expect = 2e-07
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = -1
Query: 149 LKKQRASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVGEPSSEM 3
+K++ AS +R++D LKL+K K+F SLA PGE VGVLAA+SVGEPS++M
Sbjct: 1094 MKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQM 1142
>ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Tarenaya
hassleriana]
Length = 1671
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Frame = -1
Query: 230 CEDALLMKFNTY*GHARAS*RENTSSLLK----KQRASLQLRKKDFLKLMKLKYFISLAH 63
C + +L + N Y + ++ ++ K+R + +L K++ LKL+K KYF SLA
Sbjct: 1093 CSEDMLSESNCYITDLPVTLKKQAEKFVEALPLKERIASKLVKEELLKLVKPKYFASLAQ 1152
Query: 62 PGELVGVLAAESVGEPSSEM 3
PGE VGVLAA+SVGEPS++M
Sbjct: 1153 PGEPVGVLAAQSVGEPSTQM 1172
>ref|XP_009104070.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Brassica
rapa]
Length = 1625
Score = 61.6 bits (148), Expect = 2e-07
Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Frame = -1
Query: 263 QELLMSTLGGGCEDALLMKFNTY*GHARAS*RENTSSLLK-----KQRASLQLRKKDFLK 99
Q++++ T C + +L N+Y + ++ ++ ++ AS +R++D LK
Sbjct: 1046 QDMILET----CSEDMLSGSNSYITDLPITLKKRAEKFVESMPMDERIASKMVRQEDLLK 1101
Query: 98 LMKLKYFISLAHPGELVGVLAAESVGEPSSEM 3
L+K KYF SLA PGE VGVLAA+SVGEPS++M
Sbjct: 1102 LVKSKYFASLAQPGEPVGVLAAQSVGEPSTQM 1133