BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00035577
         (1294 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s...   530   e-147
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              517   e-144
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   517   e-144
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...   497   e-137
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   490   e-135
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...   480   e-132
ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III s...   476   e-131
gb|KHG07033.1| DNA-directed RNA polymerase III subunit RPC1 [Gos...   475   e-131
ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III s...   473   e-130
ref|XP_010535561.1| PREDICTED: DNA-directed RNA polymerase III s...   473   e-130
ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III s...   469   e-129
ref|XP_008358068.1| PREDICTED: DNA-directed RNA polymerase III s...   464   e-128
ref|XP_008358064.1| PREDICTED: DNA-directed RNA polymerase III s...   464   e-128
ref|XP_009358374.1| PREDICTED: DNA-directed RNA polymerase III s...   464   e-128
ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   460   e-126
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   459   e-126
ref|XP_011005565.1| PREDICTED: DNA-directed RNA polymerase III s...   455   e-125
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...   454   e-124
ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III s...   453   e-124
ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s...   445   e-122

>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
            nucifera]
          Length = 1392

 Score =  530 bits (1365), Expect = e-147
 Identities = 265/389 (68%), Positives = 308/389 (79%), Gaps = 13/389 (3%)
 Frame = -1

Query: 1129 TDAEIQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALL 950
            T   + FTK+PY+EDVGPRKIKSI+FSM SG EI KA+E+QV+ S +YD +RKP  + LL
Sbjct: 4    TQDRMLFTKEPYIEDVGPRKIKSIRFSMFSGDEIRKAAEVQVWRSVYYDVNRKPIDDGLL 63

Query: 949  DSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARIL 770
            DSRMGPA+K   C TC GS TDCPGH+GY +L LPVFNVGYF+ IL++LKC+CKSCARIL
Sbjct: 64   DSRMGPASKSGICTTCDGSFTDCPGHFGYLNLALPVFNVGYFSTILDILKCICKSCARIL 123

Query: 769  LSERDRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKK-- 617
            L E  R  YLKKMR+ K +ALQK  L K I+ KC       K  KC+RCGYING VKK  
Sbjct: 124  LEEEKRKDYLKKMRSSKADALQKNNLMKQIVKKCTTMLSSKKALKCTRCGYINGFVKKGA 183

Query: 616  ----SGTVMGIVHDRSKLMDGVTEECEAAISKAKDSRTSFTVVYVLNPVRVLDLFRRILD 449
                +G+ +GIVHDRSK+ D   EEC +AIS  K+S+ SF VV+VLNPVR+L LF+R++D
Sbjct: 184  SISGTGSTLGIVHDRSKVNDESLEECSSAISHKKESKASFRVVHVLNPVRILALFKRMVD 243

Query: 448  QDCDLLYLSDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQ 269
            +DC+LLYL DRPEKLIITDI VPPIAIRPS F+D G  SNEDDITSKL+ II+AN  LRQ
Sbjct: 244  EDCELLYLYDRPEKLIITDIAVPPIAIRPSVFMDAGTMSNEDDITSKLSAIIRANAPLRQ 303

Query: 268  DLHCTSPTSKCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGN 89
            DL   +P SKCL  W+ LQ+EVAQYINSDVRG+P SMQ SKPLRGF+QRLKGKQGRFRGN
Sbjct: 304  DLQGANPKSKCLLDWDQLQIEVAQYINSDVRGIPTSMQPSKPLRGFVQRLKGKQGRFRGN 363

Query: 88   LSGKRVEYTARTVISPDPNLKITEVGIPI 2
            LSGKRVEYT RTVISPDPNLKITEV IPI
Sbjct: 364  LSGKRVEYTGRTVISPDPNLKITEVAIPI 392


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  517 bits (1331), Expect = e-144
 Identities = 248/379 (65%), Positives = 309/379 (81%), Gaps = 7/379 (1%)
 Frame = -1

Query: 1117 IQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRM 938
            IQFTK+PY+EDVGPRKI+SI+F++ S +EI KA+E+QV+   +YD +RKP +N LLD RM
Sbjct: 5    IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64

Query: 937  GPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSER 758
            GPANK  TCATC G+  DCPGH GY  L LPV+NVGY + I+++LKC+CKSC+R+LL E+
Sbjct: 65   GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124

Query: 757  DRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVMG 599
                YLKKMR+ K+EAL+K  L K I+ KC       K  KCSRCGY+NG+VKK+ +V+G
Sbjct: 125  ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVLG 184

Query: 598  IVHDRSKLMDGVTEECEAAISKAKDSRTSFTVVYVLNPVRVLDLFRRILDQDCDLLYLSD 419
            I+HDRSK+ DG  EEC +AIS  K+S+ SF+VV +LNPV+VL LF+R++D+DCDLL L++
Sbjct: 185  IIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLAE 244

Query: 418  RPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCTSPTSK 239
            RPEKL++T+I VPPIAIRPS F+DGG  SNE+D+T +L  IIQAN SL Q+L  T  TSK
Sbjct: 245  RPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTSK 304

Query: 238  CLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYTA 59
            CLA W+ LQ+EVAQYINSDVRGVPL+MQ+++PL GF+QRLKGKQGRFRGNLSGKRVEYT 
Sbjct: 305  CLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTG 364

Query: 58   RTVISPDPNLKITEVGIPI 2
            RTVISPDPNLKITEV IPI
Sbjct: 365  RTVISPDPNLKITEVAIPI 383


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Vitis
            vinifera]
          Length = 1383

 Score =  517 bits (1331), Expect = e-144
 Identities = 248/379 (65%), Positives = 309/379 (81%), Gaps = 7/379 (1%)
 Frame = -1

Query: 1117 IQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRM 938
            IQFTK+PY+EDVGPRKI+SI+F++ S +EI KA+E+QV+   +YD +RKP +N LLD RM
Sbjct: 5    IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64

Query: 937  GPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSER 758
            GPANK  TCATC G+  DCPGH GY  L LPV+NVGY + I+++LKC+CKSC+R+LL E+
Sbjct: 65   GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124

Query: 757  DRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVMG 599
                YLKKMR+ K+EAL+K  L K I+ KC       K  KCSRCGY+NG+VKK+ +V+G
Sbjct: 125  ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVLG 184

Query: 598  IVHDRSKLMDGVTEECEAAISKAKDSRTSFTVVYVLNPVRVLDLFRRILDQDCDLLYLSD 419
            I+HDRSK+ DG  EEC +AIS  K+S+ SF+VV +LNPV+VL LF+R++D+DCDLL L++
Sbjct: 185  IIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLAE 244

Query: 418  RPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCTSPTSK 239
            RPEKL++T+I VPPIAIRPS F+DGG  SNE+D+T +L  IIQAN SL Q+L  T  TSK
Sbjct: 245  RPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTSK 304

Query: 238  CLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYTA 59
            CLA W+ LQ+EVAQYINSDVRGVPL+MQ+++PL GF+QRLKGKQGRFRGNLSGKRVEYT 
Sbjct: 305  CLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTG 364

Query: 58   RTVISPDPNLKITEVGIPI 2
            RTVISPDPNLKITEV IPI
Sbjct: 365  RTVISPDPNLKITEVAIPI 383


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
            gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
            [Theobroma cacao]
          Length = 1395

 Score =  497 bits (1279), Expect = e-137
 Identities = 246/378 (65%), Positives = 298/378 (78%), Gaps = 7/378 (1%)
 Frame = -1

Query: 1114 QFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRMG 935
            +FTK+PY+EDVGPRKIKSIQFSM+S +EI KA+E+QV+ + +YD   +P +  LLD RMG
Sbjct: 4    KFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMG 63

Query: 934  PANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSERD 755
            PANK   CATCHG+  DCPGHYGY  L LPV+NVGY + IL++LKC+CKSC+RI+L E+ 
Sbjct: 64   PANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKL 123

Query: 754  RISYLKKMRNPKLEALQKTGLAKAILNKC------KPKKCSRCGYINGVVKKSGTVMGIV 593
               YLK+MR+PK++AL+K  + K+I+ KC      K  KC RCGY+NG VKK+  ++GI+
Sbjct: 124  CKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASSKAVKCWRCGYVNGTVKKAVAMLGII 183

Query: 592  HDRSKLMDGVTEECEAAISKAKDSRTSFTV-VYVLNPVRVLDLFRRILDQDCDLLYLSDR 416
            HDRSK+ D   EE  +AIS  K+S+ SF V  YVLNPV+VL LF+R+ D DC+LLYLSDR
Sbjct: 184  HDRSKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLSDR 243

Query: 415  PEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCTSPTSKC 236
            PEKLIIT+I VPPI IRPS  +DG + SNE+DIT +L  IIQAN SLRQ+L  T+   KC
Sbjct: 244  PEKLIITNIAVPPIPIRPSVIMDGSQ-SNENDITERLKRIIQANASLRQELVETNAAFKC 302

Query: 235  LAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYTAR 56
            L  WE+LQVEVAQYINSDVRGVP SMQ SKPL GF+QR+KGK GRFRGNLSGKRVEYT R
Sbjct: 303  LGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFVQRIKGKHGRFRGNLSGKRVEYTGR 362

Query: 55   TVISPDPNLKITEVGIPI 2
            TVISPDPNLKITEV IPI
Sbjct: 363  TVISPDPNLKITEVAIPI 380


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score =  490 bits (1261), Expect = e-135
 Identities = 246/383 (64%), Positives = 299/383 (78%), Gaps = 6/383 (1%)
 Frame = -1

Query: 1132 QTDAEIQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 953
            Q    I FTKQPY+EDVGPRKI+SIQFSMMS +EIMKA+E+QV+   +Y  +R P +  L
Sbjct: 7    QKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIEGGL 66

Query: 952  LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 773
            LD RMGPANK  TCATCHG  ++CPGHYGY  L LPV+NVGY + IL++LKC+CK C+R+
Sbjct: 67   LDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYCSRL 126

Query: 772  LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC-----KPKKCSRCGYINGVVKKSGT 608
            LL E+    YLKKMRNPK+EAL+KT L K+I+ KC     K  KC RCGYING+VKK+  
Sbjct: 127  LLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMASKAVKCPRCGYINGMVKKAVA 186

Query: 607  VMGIVHDRSKLMDGVTEECEAAISKAKDSRTSFTV-VYVLNPVRVLDLFRRILDQDCDLL 431
            V+GI+HDRSK+ + + +E  +AI+  K+S+ +  V  Y+LNPV VL LF+R+ D DC++L
Sbjct: 187  VLGIIHDRSKVTESL-QEFASAITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEVL 245

Query: 430  YLSDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCTS 251
            YLS+RPEKLIIT+I VPPIAIRPS  +DG + SNE+DIT +L  IIQ N SL+Q+L   +
Sbjct: 246  YLSERPEKLIITNIAVPPIAIRPSVIMDGSQ-SNENDITERLKRIIQTNASLQQELVEAN 304

Query: 250  PTSKCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRV 71
               K LA WE LQVEVAQYINSDVRGVP SMQ ++PL GF+QRLKGKQGRFRGNLSGKRV
Sbjct: 305  SAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRV 364

Query: 70   EYTARTVISPDPNLKITEVGIPI 2
            EYT RTVISPDPNLKITEV IPI
Sbjct: 365  EYTGRTVISPDPNLKITEVAIPI 387


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score =  480 bits (1235), Expect = e-132
 Identities = 246/398 (61%), Positives = 299/398 (75%), Gaps = 21/398 (5%)
 Frame = -1

Query: 1132 QTDAEIQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 953
            Q    I FTKQPY+EDVGPRKI+SIQFSMMS +EIMKA+E+QV+   +Y  +R P +  L
Sbjct: 7    QKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIEGGL 66

Query: 952  LDSRM---------------GPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNA 818
            LD RM               GPANK  TCATCHG  ++CPGHYGY  L LPV+NVGY + 
Sbjct: 67   LDPRMEKIIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLST 126

Query: 817  ILNVLKCVCKSCARILLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC-----KPKKC 653
            IL++LKC+CK C+R+LL E+    YLKKMRNPK+EAL+KT L K+I+ KC     K  KC
Sbjct: 127  ILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMASKAVKC 186

Query: 652  SRCGYINGVVKKSGTVMGIVHDRSKLMDGVTEECEAAISKAKDSRTSFTVV-YVLNPVRV 476
             RCGYING+VKK+  V+GI+HDRSK+ + + +E  +AI+  K+S+ +  V  Y+LNPV V
Sbjct: 187  PRCGYINGMVKKAVAVLGIIHDRSKVTESL-QEFASAITHTKESKAAVNVATYILNPVNV 245

Query: 475  LDLFRRILDQDCDLLYLSDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTI 296
            L LF+R+ D DC++LYLS+RPEKLIIT+I VPPIAIRPS  +DG + SNE+DIT +L  I
Sbjct: 246  LFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGSQ-SNENDITERLKRI 304

Query: 295  IQANTSLRQDLHCTSPTSKCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLK 116
            IQ N SL+Q+L   +   K LA WE LQVEVAQYINSDVRGVP SMQ ++PL GF+QRLK
Sbjct: 305  IQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLK 364

Query: 115  GKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPI 2
            GKQGRFRGNLSGKRVEYT RTVISPDPNLKITEV IPI
Sbjct: 365  GKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPI 402


>ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Gossypium raimondii] gi|763752836|gb|KJB20224.1|
            hypothetical protein B456_003G139100 [Gossypium
            raimondii]
          Length = 1398

 Score =  476 bits (1226), Expect = e-131
 Identities = 237/383 (61%), Positives = 291/383 (75%), Gaps = 6/383 (1%)
 Frame = -1

Query: 1132 QTDAEIQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 953
            Q   +I FTK+PY+EDVGPR+IKSI+FSM S +EI KA+E+QV+   +YD   +P +  L
Sbjct: 3    QRSQDIVFTKRPYIEDVGPRRIKSIKFSMFSDSEIAKAAEVQVYKGVYYDLQSRPIEGGL 62

Query: 952  LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 773
            LD RMGP NK   CATC GS  DCPGHYGY  L+LPV+NVGY + IL++LKC+CKSC+RI
Sbjct: 63   LDPRMGPPNKSGKCATCDGSFGDCPGHYGYLPLVLPVYNVGYLSTILDILKCICKSCSRI 122

Query: 772  LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC------KPKKCSRCGYINGVVKKSG 611
            LL ++    YLKKMR PK E L+K  + K+++ KC      K  KCSRCGY+NG VKK+ 
Sbjct: 123  LLDDKLAKDYLKKMRAPKTEPLKKAEIMKSVVKKCTAMAGGKAVKCSRCGYLNGTVKKAP 182

Query: 610  TVMGIVHDRSKLMDGVTEECEAAISKAKDSRTSFTVVYVLNPVRVLDLFRRILDQDCDLL 431
             ++G+ HDRSK+ D   EE ++AIS  K+S++S     VLNPV+VL LF+R+ D DC+LL
Sbjct: 183  KMIGVFHDRSKVNDNSLEELKSAISHTKESKSSINTSSVLNPVKVLSLFKRMTDVDCELL 242

Query: 430  YLSDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCTS 251
            YLSDRPEK IIT+I VPP AIRPS  VDG + SNE+DIT +L  IIQAN+SLRQ L  ++
Sbjct: 243  YLSDRPEKFIITNIAVPPTAIRPSVPVDGSQ-SNENDITERLKRIIQANSSLRQQLVDSN 301

Query: 250  PTSKCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRV 71
                CL  W+LLQV+VAQYINSDVRGVP  MQ ++PL GF+QRLKGKQGRFRGNLSGKRV
Sbjct: 302  AAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQPARPLSGFLQRLKGKQGRFRGNLSGKRV 361

Query: 70   EYTARTVISPDPNLKITEVGIPI 2
            E+T RTVISPDPNLKITEV IPI
Sbjct: 362  EFTGRTVISPDPNLKITEVAIPI 384


>gb|KHG07033.1| DNA-directed RNA polymerase III subunit RPC1 [Gossypium arboreum]
          Length = 1050

 Score =  475 bits (1222), Expect = e-131
 Identities = 237/383 (61%), Positives = 290/383 (75%), Gaps = 6/383 (1%)
 Frame = -1

Query: 1132 QTDAEIQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 953
            Q   +I FTK+PY+EDVGPR+IKSI+FSM S +EI KA+E+QV+   +YD   +P +  L
Sbjct: 3    QRSQDIVFTKRPYIEDVGPRRIKSIKFSMFSDSEIAKAAEVQVYKGVYYDPQSRPIEGGL 62

Query: 952  LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 773
            LD RMGP NK   CATC GS  DCPGHYGY  L+LPV+NVGY + IL++LKC+CKSC+RI
Sbjct: 63   LDPRMGPPNKSGKCATCDGSFGDCPGHYGYLPLVLPVYNVGYLSTILDILKCICKSCSRI 122

Query: 772  LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC------KPKKCSRCGYINGVVKKSG 611
            LL ++    YLKKMR PK E L+K  + K+++ KC      K  KCSRCGY+NG VKK+ 
Sbjct: 123  LLDDKLAKDYLKKMRAPKTEPLKKAEIMKSVVKKCTAMAGGKAVKCSRCGYLNGTVKKAP 182

Query: 610  TVMGIVHDRSKLMDGVTEECEAAISKAKDSRTSFTVVYVLNPVRVLDLFRRILDQDCDLL 431
             ++G+ HDRSK+ D  +EE ++AIS  K+S++S     VLNPV+VL LF+R+ D DC+LL
Sbjct: 183  KMIGVFHDRSKVNDNSSEELKSAISHTKESKSSINTSSVLNPVKVLSLFKRMTDVDCELL 242

Query: 430  YLSDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCTS 251
            YLSDRPEK IIT+I VPP AIRPS  VD    SNE+DIT +L  IIQAN+SLRQ L  ++
Sbjct: 243  YLSDRPEKFIITNIAVPPTAIRPSVPVD----SNENDITERLKRIIQANSSLRQQLVDSN 298

Query: 250  PTSKCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRV 71
                CL  W+LLQV+VAQYINSDVRGVP  MQ S+PL GF+QRLKGKQGRFRGNLSGKRV
Sbjct: 299  AAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQPSRPLSGFLQRLKGKQGRFRGNLSGKRV 358

Query: 70   EYTARTVISPDPNLKITEVGIPI 2
            E+T RTVISPDPNLKITEV IPI
Sbjct: 359  EFTGRTVISPDPNLKITEVAIPI 381


>ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Gossypium raimondii]
          Length = 1395

 Score =  473 bits (1218), Expect = e-130
 Identities = 236/383 (61%), Positives = 289/383 (75%), Gaps = 6/383 (1%)
 Frame = -1

Query: 1132 QTDAEIQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 953
            Q   +I FTK+PY+EDVGPR+IKSI+FSM S +EI KA+E+QV+   +YD   +P +  L
Sbjct: 3    QRSQDIVFTKRPYIEDVGPRRIKSIKFSMFSDSEIAKAAEVQVYKGVYYDLQSRPIEGGL 62

Query: 952  LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 773
            LD RMGP NK   CATC GS  DCPGHYGY  L+LPV+NVGY + IL++LKC+CKSC+RI
Sbjct: 63   LDPRMGPPNKSGKCATCDGSFGDCPGHYGYLPLVLPVYNVGYLSTILDILKCICKSCSRI 122

Query: 772  LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC------KPKKCSRCGYINGVVKKSG 611
            LL ++    YLKKMR PK E L+K  + K+++ KC      K  KCSRCGY+NG VKK+ 
Sbjct: 123  LLDDKLAKDYLKKMRAPKTEPLKKAEIMKSVVKKCTAMAGGKAVKCSRCGYLNGTVKKAP 182

Query: 610  TVMGIVHDRSKLMDGVTEECEAAISKAKDSRTSFTVVYVLNPVRVLDLFRRILDQDCDLL 431
             ++G+ HDRSK+ D   EE ++AIS  K+S++S     VLNPV+VL LF+R+ D DC+LL
Sbjct: 183  KMIGVFHDRSKVNDNSLEELKSAISHTKESKSSINTSSVLNPVKVLSLFKRMTDVDCELL 242

Query: 430  YLSDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCTS 251
            YLSDRPEK IIT+I VPP AIRPS  VDG    NE+DIT +L  IIQAN+SLRQ L  ++
Sbjct: 243  YLSDRPEKFIITNIAVPPTAIRPSVPVDG----NENDITERLKRIIQANSSLRQQLVDSN 298

Query: 250  PTSKCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRV 71
                CL  W+LLQV+VAQYINSDVRGVP  MQ ++PL GF+QRLKGKQGRFRGNLSGKRV
Sbjct: 299  AAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQPARPLSGFLQRLKGKQGRFRGNLSGKRV 358

Query: 70   EYTARTVISPDPNLKITEVGIPI 2
            E+T RTVISPDPNLKITEV IPI
Sbjct: 359  EFTGRTVISPDPNLKITEVAIPI 381


>ref|XP_010535561.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Tarenaya
            hassleriana]
          Length = 1376

 Score =  473 bits (1217), Expect = e-130
 Identities = 241/386 (62%), Positives = 296/386 (76%), Gaps = 9/386 (2%)
 Frame = -1

Query: 1132 QTDAEIQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 953
            Q   EI+FTK+PY+EDVGPR+IKSI+FS+ S TE+MKA+E+QV+   +YD + KP +  L
Sbjct: 2    QATKEIEFTKKPYIEDVGPRRIKSIEFSIFSETEVMKAAEVQVWQGVYYDTNGKPIEGGL 61

Query: 952  LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 773
            LD RMGP NK   C TC G+  +CPGHYGY  L LPV+N+GYFN IL++LKC+CK C+R+
Sbjct: 62   LDPRMGPPNKKGKCTTCDGNFQNCPGHYGYLKLALPVYNIGYFNNILDILKCICKRCSRM 121

Query: 772  LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC------KPKKCSRCGYINGVVKKSG 611
            LL E+    YLKKMRNPK+E+L+KT LAKA++ KC      K   C +CGY+NG+VKK+ 
Sbjct: 122  LLDEKLSEDYLKKMRNPKMESLKKTELAKAVVKKCSAMASSKIITCKKCGYLNGMVKKAA 181

Query: 610  TV--MGIVHDRSKLMDGVTEECEAAISKAKDSRTSFT-VVYVLNPVRVLDLFRRILDQDC 440
            T   +GI HDRS++ +G  EE ++AIS  K+S  +   + YVLNPV VL LF+ + ++DC
Sbjct: 182  TSSGIGISHDRSRIHEGDVEEFKSAISHTKESSGAINPITYVLNPVSVLALFKGMSNKDC 241

Query: 439  DLLYLSDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLH 260
            +LLYL+DRPEKLIIT I VPPI+IRPS  + GG  SNE+DIT +L  +IQ N SLRQ L 
Sbjct: 242  ELLYLADRPEKLIITSIAVPPISIRPSVII-GGTQSNENDITERLKRVIQNNASLRQFLV 300

Query: 259  CTSPTSKCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSG 80
              + + K L AWE LQVEVAQYINSDVRGVPL+MQ SKPL GFIQRLKGKQGRFRGNLSG
Sbjct: 301  EPTTSPKNLHAWESLQVEVAQYINSDVRGVPLAMQPSKPLSGFIQRLKGKQGRFRGNLSG 360

Query: 79   KRVEYTARTVISPDPNLKITEVGIPI 2
            KRVEYT RTVISPDPNLKITEV IPI
Sbjct: 361  KRVEYTGRTVISPDPNLKITEVAIPI 386


>ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Sesamum
            indicum]
          Length = 1405

 Score =  469 bits (1207), Expect = e-129
 Identities = 227/384 (59%), Positives = 292/384 (76%), Gaps = 7/384 (1%)
 Frame = -1

Query: 1132 QTDAEIQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 953
            +  A +QF+KQPY+EDVGPR+I+SIQFS  SGTE++K +E++V    +YD  +KP  N L
Sbjct: 3    KVQATLQFSKQPYIEDVGPRRIESIQFSTFSGTEVLKTAEVEVSRGVYYDSTKKPIDNGL 62

Query: 952  LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 773
            LD  MGP NK   C TC+G+  +CPGH GY  L LPV+NVGY + I+++LKC+CK CAR+
Sbjct: 63   LDPHMGPPNKNGFCKTCYGNFRECPGHCGYLALALPVYNVGYLSTIIDILKCICKKCARV 122

Query: 772  LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKS 614
            LL E++R  +LKKMRNPKLE L+K  + K ++ +C       +  KCSRCGYING+VKK 
Sbjct: 123  LLEEKERQEFLKKMRNPKLEPLKKNEILKKVVKRCNAMAGSKRAVKCSRCGYINGMVKKG 182

Query: 613  GTVMGIVHDRSKLMDGVTEECEAAISKAKDSRTSFTVVYVLNPVRVLDLFRRILDQDCDL 434
               + I HDR+K++D   EEC++A+S  KDS+ +     +++P  V  L R +LD+DC+L
Sbjct: 183  P--LKIQHDRAKIVDSDLEECQSAVSHTKDSKGNVNFSSIIDPKLVYQLLRNMLDEDCEL 240

Query: 433  LYLSDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCT 254
            LYL+DRPEKL++T+ILVPPIAIRPS FVDGG  SNE+DIT +L  IIQAN SLRQ+L  T
Sbjct: 241  LYLNDRPEKLMVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQELLET 300

Query: 253  SPTSKCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKR 74
            +  +K L +W+ LQ+EVAQYINSDVRG+P  M ++KPL GF+QRLKGKQGRFRGNLSGKR
Sbjct: 301  NLYNKNLTSWDDLQMEVAQYINSDVRGLPFHMTTAKPLSGFVQRLKGKQGRFRGNLSGKR 360

Query: 73   VEYTARTVISPDPNLKITEVGIPI 2
            VEYT RTVISPDPNLKI+EV IPI
Sbjct: 361  VEYTGRTVISPDPNLKISEVAIPI 384


>ref|XP_008358068.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Malus domestica]
          Length = 1390

 Score =  464 bits (1195), Expect = e-128
 Identities = 235/381 (61%), Positives = 292/381 (76%), Gaps = 9/381 (2%)
 Frame = -1

Query: 1117 IQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRM 938
            I FTKQP++ED G  +I+  +FS MS  EI K +E+Q+F   +YD +RKP +  LLD R+
Sbjct: 9    IIFTKQPFIEDEGHLRIEKWKFSAMSDKEIRKMAEVQIFKGQYYDSNRKPIEGGLLDPRL 68

Query: 937  GPANKFI-TCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSE 761
            GPAN+    CATC G+  DCPGH+GY  L LPVFNVGY + I+++LKC+CK C+ ILL E
Sbjct: 69   GPANRSSGACATCGGTTKDCPGHFGYLVLALPVFNVGYLSTIVDILKCICKLCSGILLEE 128

Query: 760  RDRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVM 602
              RI +LKKMR PK+E ++K+ L K I+ KC       +P KCS+CG+ING VKK+  V+
Sbjct: 129  GMRIEFLKKMRRPKMEPMKKSELMKVIVKKCNSLTTNNRPVKCSKCGFINGSVKKAVGVL 188

Query: 601  GIVHDRSKLMDGVTEECEAAISKAKDSRTSFT-VVYVLNPVRVLDLFRRILDQDCDLLYL 425
            GI+HDRSK + GV ++  +AIS  K+S+ SF    + LNP RV  LF+R++D+DC+LLYL
Sbjct: 189  GIIHDRSKFI-GVMDDFRSAISHTKESKASFNPATHNLNPARVFSLFKRMVDEDCELLYL 247

Query: 424  SDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCTSPT 245
            SDRPE LI+T+I VPPI IRPS  VDG + SNE+DIT +L  IIQ+N+SLRQDL   S  
Sbjct: 248  SDRPENLIMTNIAVPPIPIRPSVIVDGSQ-SNENDITERLKRIIQSNSSLRQDLIEASSA 306

Query: 244  SKCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEY 65
            +KCLA+WE+LQVEVAQYINSDVRGVP SMQ+SKPL GF+QRLKGK GRFRGNLSGKRVEY
Sbjct: 307  AKCLASWEILQVEVAQYINSDVRGVPFSMQTSKPLAGFVQRLKGKGGRFRGNLSGKRVEY 366

Query: 64   TARTVISPDPNLKITEVGIPI 2
            T RTVISPDPNLKITEVGIPI
Sbjct: 367  TGRTVISPDPNLKITEVGIPI 387


>ref|XP_008358064.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Malus domestica]
          Length = 1419

 Score =  464 bits (1195), Expect = e-128
 Identities = 235/381 (61%), Positives = 292/381 (76%), Gaps = 9/381 (2%)
 Frame = -1

Query: 1117 IQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRM 938
            I FTKQP++ED G  +I+  +FS MS  EI K +E+Q+F   +YD +RKP +  LLD R+
Sbjct: 9    IIFTKQPFIEDEGHLRIEKWKFSAMSDKEIRKMAEVQIFKGQYYDSNRKPIEGGLLDPRL 68

Query: 937  GPANKFI-TCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSE 761
            GPAN+    CATC G+  DCPGH+GY  L LPVFNVGY + I+++LKC+CK C+ ILL E
Sbjct: 69   GPANRSSGACATCGGTTKDCPGHFGYLVLALPVFNVGYLSTIVDILKCICKLCSGILLEE 128

Query: 760  RDRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVM 602
              RI +LKKMR PK+E ++K+ L K I+ KC       +P KCS+CG+ING VKK+  V+
Sbjct: 129  GMRIEFLKKMRRPKMEPMKKSELMKVIVKKCNSLTTNNRPVKCSKCGFINGSVKKAVGVL 188

Query: 601  GIVHDRSKLMDGVTEECEAAISKAKDSRTSFT-VVYVLNPVRVLDLFRRILDQDCDLLYL 425
            GI+HDRSK + GV ++  +AIS  K+S+ SF    + LNP RV  LF+R++D+DC+LLYL
Sbjct: 189  GIIHDRSKFI-GVMDDFRSAISHTKESKASFNPATHNLNPARVFSLFKRMVDEDCELLYL 247

Query: 424  SDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCTSPT 245
            SDRPE LI+T+I VPPI IRPS  VDG + SNE+DIT +L  IIQ+N+SLRQDL   S  
Sbjct: 248  SDRPENLIMTNIAVPPIPIRPSVIVDGSQ-SNENDITERLKRIIQSNSSLRQDLIEASSA 306

Query: 244  SKCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEY 65
            +KCLA+WE+LQVEVAQYINSDVRGVP SMQ+SKPL GF+QRLKGK GRFRGNLSGKRVEY
Sbjct: 307  AKCLASWEILQVEVAQYINSDVRGVPFSMQTSKPLAGFVQRLKGKGGRFRGNLSGKRVEY 366

Query: 64   TARTVISPDPNLKITEVGIPI 2
            T RTVISPDPNLKITEVGIPI
Sbjct: 367  TGRTVISPDPNLKITEVGIPI 387


>ref|XP_009358374.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Pyrus x
            bretschneideri]
          Length = 864

 Score =  464 bits (1194), Expect = e-128
 Identities = 235/381 (61%), Positives = 292/381 (76%), Gaps = 9/381 (2%)
 Frame = -1

Query: 1117 IQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRM 938
            I FTKQP++ED G  +I+  +FS MS  EI K +E+Q+F   +YD +RKP +  LLD R+
Sbjct: 9    IIFTKQPFIEDEGHLRIEKWKFSAMSDKEIGKMAEVQIFKGQYYDSNRKPIEGGLLDPRL 68

Query: 937  GPANKFI-TCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSE 761
            GPAN+    CATC G+  DCPGH+GY  L LPVFNVGY + I+++LKC+CK C+ ILL E
Sbjct: 69   GPANRSSGACATCGGTTKDCPGHFGYLVLALPVFNVGYLSTIVDILKCICKLCSGILLEE 128

Query: 760  RDRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVM 602
              RI +LKKMR PK+E ++K+ L K I+ KC       +P KCS+CG+ING VKK+  V+
Sbjct: 129  GMRIEFLKKMRRPKMEPMKKSELMKVIVKKCNSLTTNNRPVKCSKCGFINGSVKKAVGVL 188

Query: 601  GIVHDRSKLMDGVTEECEAAISKAKDSRTSFT-VVYVLNPVRVLDLFRRILDQDCDLLYL 425
            GI+HDRSK + GV ++  +AIS  K+S+ SF    + LNP RV  LF+R++D+DC+LLYL
Sbjct: 189  GIIHDRSKFV-GVMDDFRSAISHTKESKASFNPATHNLNPARVFSLFKRMVDEDCELLYL 247

Query: 424  SDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCTSPT 245
            SDRPE LI+T+I VPPI IRPS  VDG + SNE+DIT +L  IIQ+N+SLRQDL   S  
Sbjct: 248  SDRPENLIMTNIAVPPIPIRPSVIVDGSQ-SNENDITERLKRIIQSNSSLRQDLMEASSA 306

Query: 244  SKCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEY 65
            +KCLA+WE+LQVEVAQYINSDVRGVP SMQ+SKPL GF+QRLKGK GRFRGNLSGKRVEY
Sbjct: 307  AKCLASWEILQVEVAQYINSDVRGVPFSMQTSKPLAGFVQRLKGKGGRFRGNLSGKRVEY 366

Query: 64   TARTVISPDPNLKITEVGIPI 2
            T RTVISPDPNLKITEVGIPI
Sbjct: 367  TGRTVISPDPNLKITEVGIPI 387


>ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit rpc1 [Cucumis melo]
          Length = 1400

 Score =  460 bits (1183), Expect = e-126
 Identities = 230/379 (60%), Positives = 285/379 (75%), Gaps = 9/379 (2%)
 Frame = -1

Query: 1111 FTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRMGP 932
            FTKQPY+EDVGPRKIKS+QF+  SG EI K +E+QV+   +YD  RKP    LLD RMGP
Sbjct: 11   FTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMGP 70

Query: 931  ANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSERDR 752
            ANK   C+TCH +  DCPGHYGY +L LPVFNVGYF  IL +LKC+CKSC+RILL E+  
Sbjct: 71   ANKGCKCSTCHANFGDCPGHYGYVNLSLPVFNVGYFTTILEILKCICKSCSRILLEEKLY 130

Query: 751  ISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVMGIV 593
              +L+KMRNPKLEAL+K  L K I+ KC       K  KCSRCGY+NG VKK+ +++GI+
Sbjct: 131  KDFLRKMRNPKLEALRKCDLVKKIIKKCSTLTTGNKSTKCSRCGYLNGSVKKAVSMLGIL 190

Query: 592  HDRSKLMDG--VTEECEAAISKAKDSRTSFTVVYVLNPVRVLDLFRRILDQDCDLLYLSD 419
            H R++  D   V+E+  A  + + D         +LNP RVL LF+R+ D+DC+LL+LSD
Sbjct: 191  HYRARSKDAGVVSEDLRAPYNVSND---------ILNPFRVLCLFQRMSDEDCELLFLSD 241

Query: 418  RPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCTSPTSK 239
            RPEKLIIT++LVPPIAIRPS  +DG + SNE+DIT +L  IIQ N S+ Q+L  ++  +K
Sbjct: 242  RPEKLIITNVLVPPIAIRPSVIMDGSQ-SNENDITERLKRIIQQNASVSQELSTSNSQAK 300

Query: 238  CLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYTA 59
            CL +W++LQ EVAQ INSDVRG+P +MQ SKPL GF+QRLKGKQGRFRGNL GKRVE+T 
Sbjct: 301  CLESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEFTG 360

Query: 58   RTVISPDPNLKITEVGIPI 2
            RTVISPDPNLKITEV +PI
Sbjct: 361  RTVISPDPNLKITEVAVPI 379


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Cucumis
            sativus]
          Length = 1400

 Score =  459 bits (1182), Expect = e-126
 Identities = 230/379 (60%), Positives = 285/379 (75%), Gaps = 9/379 (2%)
 Frame = -1

Query: 1111 FTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRMGP 932
            FTKQPY+EDVGPRKIKS+QF+  SG EI K +E+QV+   +YD  RKP    LLD RMGP
Sbjct: 11   FTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMGP 70

Query: 931  ANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSERDR 752
            ANK   CATCH +  DCPGHYGY +L LPVFNVGYF  IL +LKC+CKSC+RILL E+  
Sbjct: 71   ANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRILLEEKLF 130

Query: 751  ISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVMGIV 593
              +L+KMRNPKLEAL+K  L K I+ KC       K  +CSRCGY+NG VKK+ +++GI+
Sbjct: 131  KDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNKSTRCSRCGYLNGSVKKAVSMLGIL 190

Query: 592  HDRSKLMDG--VTEECEAAISKAKDSRTSFTVVYVLNPVRVLDLFRRILDQDCDLLYLSD 419
            H R++  D   V+E+  A  + + D         +LNP RVL LF+R+ D+DC+LL+LS+
Sbjct: 191  HYRARSKDAGVVSEDLRAPYNVSND---------ILNPFRVLCLFQRMSDEDCELLFLSN 241

Query: 418  RPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCTSPTSK 239
            RPEKLIIT++LVPPIAIRPS  +DG + SNE+DIT +L  IIQ N S+ Q+L  ++  +K
Sbjct: 242  RPEKLIITNVLVPPIAIRPSVIMDGSQ-SNENDITERLKRIIQQNASVSQELSTSNSQAK 300

Query: 238  CLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYTA 59
            CL +W++LQ EVAQ INSDVRG+P SMQ SKPL GF+QRLKGKQGRFRGNL GKRVE+T 
Sbjct: 301  CLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEFTG 360

Query: 58   RTVISPDPNLKITEVGIPI 2
            RTVISPDPNLKITEV +PI
Sbjct: 361  RTVISPDPNLKITEVAVPI 379


>ref|XP_011005565.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Populus
            euphratica]
          Length = 1410

 Score =  455 bits (1170), Expect = e-125
 Identities = 232/385 (60%), Positives = 287/385 (74%), Gaps = 8/385 (2%)
 Frame = -1

Query: 1132 QTDAEIQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 953
            Q   +I +TKQPYVEDVGPR+IKSIQFS MSG++I+KASE QV    +YD ++K     L
Sbjct: 3    QRAQDIIYTKQPYVEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGL 62

Query: 952  LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 773
            LD+RMG  NK  TC TC GS TDCPGH+GY +L+LPV+NVGY + IL++LKC+CKSC+R+
Sbjct: 63   LDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRV 122

Query: 772  LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC------KPKKCSRCGYINGVVKKSG 611
            L+ E+ R SYLK+MRNP+ E L+K  L K I+ KC      K  KC RCGY+NG+VKK+G
Sbjct: 123  LIDEKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSKAVKCLRCGYMNGMVKKAG 182

Query: 610  TVMGIVHDRSKLMDGVTEECEAAISKAKDSRTSF-TVVYVLNPVRVLDLFRRILDQDCDL 434
            +V+GI+HDRSKL DG  EEC++AI   +++R       Y+LNPVRVL LF+RI+++DC+L
Sbjct: 183  SVVGIIHDRSKLSDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRIVEEDCEL 242

Query: 433  LYLSDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCT 254
            LYL  RPEKLIIT I VPPI+IRPS F +G + SNE+DIT +L  IIQ N  LR +L   
Sbjct: 243  LYLQGRPEKLIITTIAVPPISIRPSVFTEGSQ-SNENDITERLKQIIQFNAKLRLELLEG 301

Query: 253  SPTS-KCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGK 77
              T  K L  W+ LQ  V  YINSDVR +PL MQ  +PL GF+QRL GKQGRFR NL+GK
Sbjct: 302  RRTGIKYLIGWDELQAVVTLYINSDVR-IPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGK 360

Query: 76   RVEYTARTVISPDPNLKITEVGIPI 2
            RVE+T RTVISPDPNLKITEV IPI
Sbjct: 361  RVEFTGRTVISPDPNLKITEVAIPI 385


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1394

 Score =  454 bits (1167), Expect = e-124
 Identities = 230/385 (59%), Positives = 288/385 (74%), Gaps = 8/385 (2%)
 Frame = -1

Query: 1132 QTDAEIQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 953
            Q   +I +TKQPY+EDVGPR+IKSIQFS MSG++I+KASE QV    +YD ++K     L
Sbjct: 3    QRAQDIIYTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGL 62

Query: 952  LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 773
            LD+RMG  NK  TC TC GS TDCPGH+GY +L+LPV+NVGY + IL++LKC+CKSC+R+
Sbjct: 63   LDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRV 122

Query: 772  LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC------KPKKCSRCGYINGVVKKSG 611
            L+ E+ R SYLK+MRNP+ E L+K  L K I+ KC      K  KC RCGY+NG+VKK+G
Sbjct: 123  LVDEKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSKAVKCLRCGYMNGMVKKAG 182

Query: 610  TVMGIVHDRSKLMDGVTEECEAAISKAKDSRTSF-TVVYVLNPVRVLDLFRRILDQDCDL 434
            +V+GI+HDRSKL+DG  EEC++AI   +++R       Y+LNPVRVL LF+R++++DC+L
Sbjct: 183  SVVGIIHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCEL 242

Query: 433  LYLSDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCT 254
            LYL  RPEKLIIT I VPPI+IRPS F +G + SNE+DIT +L  IIQ N  LR +L   
Sbjct: 243  LYLQGRPEKLIITTIAVPPISIRPSVFTEGSQ-SNENDITERLKQIIQFNAKLRLELLEG 301

Query: 253  SPTS-KCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGK 77
              T  K L  W+ LQ  V  YINSDVR +PL MQ  +PL GF+QRL GKQGRFR NL+GK
Sbjct: 302  RRTGIKYLIGWDELQAVVTLYINSDVR-IPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGK 360

Query: 76   RVEYTARTVISPDPNLKITEVGIPI 2
            RVE+T RTVISPDPNLKITEV IPI
Sbjct: 361  RVEFTGRTVISPDPNLKITEVAIPI 385


>ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Elaeis
            guineensis]
          Length = 1369

 Score =  453 bits (1165), Expect = e-124
 Identities = 225/373 (60%), Positives = 276/373 (73%)
 Frame = -1

Query: 1120 EIQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSR 941
            +++ TK+PY+EDVGPRKIKSI+FS  SG EI K +E+QV+N+  YD + KP +N LLD R
Sbjct: 4    KLRCTKEPYIEDVGPRKIKSIRFSTFSGEEIRKLAEVQVWNNRIYDLNLKPIENGLLDPR 63

Query: 940  MGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSE 761
            MG  N+   CATCHG+ TDCPGH+GY  L LPVFNVGYFN+ILN+LKC+CK C RILL E
Sbjct: 64   MGAPNRQTECATCHGNFTDCPGHFGYLKLTLPVFNVGYFNSILNILKCICKGCGRILLDE 123

Query: 760  RDRISYLKKMRNPKLEALQKTGLAKAILNKCKPKKCSRCGYINGVVKKSGTVMGIVHDRS 581
              R SYLKKMRNPK +  QK  L K + +KCKP +C RCGY NGVVKK+ + +  + D S
Sbjct: 124  TLRKSYLKKMRNPKADIFQKNALMKMVRDKCKPSRCLRCGYANGVVKKARSGLYFIQDFS 183

Query: 580  KLMDGVTEECEAAISKAKDSRTSFTVVYVLNPVRVLDLFRRILDQDCDLLYLSDRPEKLI 401
            K  D   EE  +A+S  KD +TSF V +VL+ V VL LFR++LD+DC+LL L DRPEKLI
Sbjct: 184  KTADPSVEEFRSALSHTKD-KTSFQVSHVLSAVAVLSLFRKMLDEDCELLNLYDRPEKLI 242

Query: 400  ITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCTSPTSKCLAAWE 221
            +T I VPP++IRPS  VD G++SNED+ITS L  II  N+ LR+DL   +P  KCL  W 
Sbjct: 243  VTHIAVPPVSIRPSVIVDSGRSSNEDNITSILKNIINTNSILREDLEGAAPPFKCLDCWT 302

Query: 220  LLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYTARTVISP 41
             LQ++V +YINS+   +P S       RG +QRLKGKQGRFRGNLSGKRVE+T RTVISP
Sbjct: 303  HLQIQVVEYINSEAPCIPDSKH-----RGLVQRLKGKQGRFRGNLSGKRVEFTGRTVISP 357

Query: 40   DPNLKITEVGIPI 2
            DPNLKITEV IPI
Sbjct: 358  DPNLKITEVAIPI 370


>ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED:
            DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris]
          Length = 1390

 Score =  445 bits (1145), Expect = e-122
 Identities = 225/384 (58%), Positives = 278/384 (72%), Gaps = 7/384 (1%)
 Frame = -1

Query: 1132 QTDAEIQFTKQPYVEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 953
            +T   IQFTK+PY+EDVGPRKIKSIQFS+ S  EI+K  E++V+   +YD  +KP  N L
Sbjct: 3    RTQEIIQFTKEPYIEDVGPRKIKSIQFSLFSEVEILKLGEVEVYRGVYYDSTKKPIPNGL 62

Query: 952  LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 773
            LD RMGP NK   C TCHG+  +CPGHYGY  L LPV+NVGY   ++++LKC+CK C+ I
Sbjct: 63   LDPRMGPPNKNGGCETCHGNFRECPGHYGYLVLTLPVYNVGYLGTVVDLLKCICKCCSSI 122

Query: 772  LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKS 614
            LL +++R  +LKKMRNP+ E L K+ L K ++ KC       K   CS+CGY+NG+VKK 
Sbjct: 123  LLDDKERRVFLKKMRNPRTEPLMKSELQKKVVKKCTSMTSGQKSVTCSKCGYMNGMVKKG 182

Query: 613  GTVMGIVHDRSKLMDGVTEECEAAISKAKDSRTSFTVVYVLNPVRVLDLFRRILDQDCDL 434
               + I+H+R        +E  AAIS   D +TS +V   ++P  V  LF+ + D+DC+L
Sbjct: 183  Q--LKIIHERGNRF---LDEFNAAISHKIDLKTSVSVPPEIDPKAVYSLFKNMSDEDCEL 237

Query: 433  LYLSDRPEKLIITDILVPPIAIRPSAFVDGGKNSNEDDITSKLNTIIQANTSLRQDLHCT 254
            LYLSDRPEKL++T I VPPIAIRPS FVDGG  SNE+DIT +L  IIQ N  L +D+  T
Sbjct: 238  LYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQENARLLEDISDT 297

Query: 253  SPTSKCLAAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKR 74
            S  +K L AW  LQ+EVAQYINSDVRGVPL +Q+SKP+ GF QRLKGKQGRFRGNLSGKR
Sbjct: 298  SFQNKSLNAWVGLQMEVAQYINSDVRGVPLHLQASKPMSGFTQRLKGKQGRFRGNLSGKR 357

Query: 73   VEYTARTVISPDPNLKITEVGIPI 2
            VEYT RTVISPDPNLKITEV IPI
Sbjct: 358  VEYTGRTVISPDPNLKITEVAIPI 381