BLASTX nr result

ID: Papaver29_contig00034864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00034864
         (547 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010265029.1| PREDICTED: RNA-binding protein 42-like [Nelu...    80   4e-13
ref|XP_010660214.1| PREDICTED: RNA-binding protein 42-like isofo...    74   3e-11
ref|XP_002266454.2| PREDICTED: RNA-binding protein 42-like isofo...    74   3e-11
ref|XP_002272469.1| PREDICTED: RNA-binding protein 42 [Vitis vin...    71   4e-10
emb|CAN63219.1| hypothetical protein VITISV_033169 [Vitis vinifera]    71   4e-10
ref|XP_008441837.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...    64   3e-08
ref|XP_010262346.1| PREDICTED: RNA-binding protein 42-like isofo...    64   6e-08
ref|XP_010262343.1| PREDICTED: RNA-binding protein 42-like isofo...    64   6e-08
ref|XP_004152823.1| PREDICTED: RNA-binding protein 42 [Cucumis s...    64   6e-08
gb|KNA12341.1| hypothetical protein SOVF_126450 [Spinacia oleracea]    60   8e-07
ref|XP_010102230.1| hypothetical protein L484_024511 [Morus nota...    57   4e-06
emb|CDO99991.1| unnamed protein product [Coffea canephora]             57   5e-06

>ref|XP_010265029.1| PREDICTED: RNA-binding protein 42-like [Nelumbo nucifera]
          Length = 261

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 46/86 (53%), Positives = 54/86 (62%)
 Frame = -3

Query: 260 STSSQFTYSNGSYFPLPFHLXXXXXXQPDPMAAYQYPNSHIPPTPTYQIPAPAPSKILMP 81
           S+S+Q+TYSNGSYFPLPFHL      Q DP AA QY   ++PP P+ QIPAP P K    
Sbjct: 14  SSSAQYTYSNGSYFPLPFHL-----QQQDPTAAQQYSKPYMPPAPSVQIPAP-PVK-FPA 66

Query: 80  PPMHPSVYXXXXXXXTGYTLPQYQQA 3
            P+ P VY         Y+LPQYQQA
Sbjct: 67  APVIPPVYPAPAPVAGIYSLPQYQQA 92


>ref|XP_010660214.1| PREDICTED: RNA-binding protein 42-like isoform X2 [Vitis vinifera]
          Length = 217

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 47/92 (51%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
 Frame = -3

Query: 272 ASDGSTSSQFTYSNGSYFPLPFHLXXXXXXQPDPMAAY-QYPNSHI-PPTPTYQIPAPAP 99
           +S  S+SSQFTYSN SYFPLPFHL      Q DPMAA  QYP  ++ PP P  Q+P P P
Sbjct: 7   SSSTSSSSQFTYSNASYFPLPFHL-----QQSDPMAAVSQYPKPYVAPPPPPVQVPVP-P 60

Query: 98  SKILMPPPMHPSVYXXXXXXXTGYTLPQYQQA 3
            KI    P++P+           Y+LPQYQQA
Sbjct: 61  VKIPAVAPVYPA----PAPVAGVYSLPQYQQA 88


>ref|XP_002266454.2| PREDICTED: RNA-binding protein 42-like isoform X1 [Vitis vinifera]
           gi|731417227|ref|XP_010660213.1| PREDICTED: RNA-binding
           protein 42-like isoform X1 [Vitis vinifera]
          Length = 257

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 47/92 (51%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
 Frame = -3

Query: 272 ASDGSTSSQFTYSNGSYFPLPFHLXXXXXXQPDPMAAY-QYPNSHI-PPTPTYQIPAPAP 99
           +S  S+SSQFTYSN SYFPLPFHL      Q DPMAA  QYP  ++ PP P  Q+P P P
Sbjct: 7   SSSTSSSSQFTYSNASYFPLPFHL-----QQSDPMAAVSQYPKPYVAPPPPPVQVPVP-P 60

Query: 98  SKILMPPPMHPSVYXXXXXXXTGYTLPQYQQA 3
            KI    P++P+           Y+LPQYQQA
Sbjct: 61  VKIPAVAPVYPA----PAPVAGVYSLPQYQQA 88


>ref|XP_002272469.1| PREDICTED: RNA-binding protein 42 [Vitis vinifera]
          Length = 257

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
 Frame = -3

Query: 272 ASDGSTSSQFTYSNGSYFPLPFHLXXXXXXQPDPMAAYQYPNSHIPPT-PTYQIPAPAPS 96
           +S  S+SSQFTYSN SYFPLPFHL      Q  PMA  QYP  ++ P+ P   +P P P 
Sbjct: 8   SSSSSSSSQFTYSNASYFPLPFHL-----QQSGPMAVSQYPQPYVAPSPPPVHVPVP-PV 61

Query: 95  KILMPPPMHPSVYXXXXXXXTGYTLPQYQQA 3
           KI    P++P+           Y+LPQYQQA
Sbjct: 62  KISTIAPVYPA----SAPGAGVYSLPQYQQA 88


>emb|CAN63219.1| hypothetical protein VITISV_033169 [Vitis vinifera]
          Length = 257

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
 Frame = -3

Query: 272 ASDGSTSSQFTYSNGSYFPLPFHLXXXXXXQPDPMAAYQYPNSHIPPT-PTYQIPAPAPS 96
           +S  S+SSQFTYSN SYFPLPFHL      Q  PMA  QYP  ++ P+ P   +P P P 
Sbjct: 8   SSSSSSSSQFTYSNASYFPLPFHL-----QQSGPMAVSQYPQPYVAPSPPPVHVPVP-PV 61

Query: 95  KILMPPPMHPSVYXXXXXXXTGYTLPQYQQA 3
           KI    P++P+           Y+LPQYQQA
Sbjct: 62  KISTIAPVYPA----SAPGAGVYSLPQYQQA 88


>ref|XP_008441837.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 42 [Cucumis
           melo]
          Length = 253

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 39/91 (42%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = -3

Query: 272 ASDGSTSSQFTYSNGSYFPLPFHLXXXXXXQPDPMAAYQYPNSHI-PPTPTYQIPAPAPS 96
           ++  S++SQFTYSNGSYFPLPFHL         P     YP+ ++ PP P    P P P 
Sbjct: 10  SASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPP----PYPSPYVAPPGPP---PVPLPV 62

Query: 95  KILMPPPMHPSVYXXXXXXXTGYTLPQYQQA 3
             + P P  P            YTLPQYQQA
Sbjct: 63  APVYPAPAPPPAV---------YTLPQYQQA 84


>ref|XP_010262346.1| PREDICTED: RNA-binding protein 42-like isoform X2 [Nelumbo
           nucifera]
          Length = 178

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 36/86 (41%), Positives = 47/86 (54%)
 Frame = -3

Query: 260 STSSQFTYSNGSYFPLPFHLXXXXXXQPDPMAAYQYPNSHIPPTPTYQIPAPAPSKILMP 81
           S S+ ++Y+NG YFP+PFHL      Q DP AA QY   ++PP P    P   P+  ++P
Sbjct: 14  SASAPYSYTNGPYFPVPFHL-----QQQDPTAAQQYTKPYVPPAP----PVKIPTASVIP 64

Query: 80  PPMHPSVYXXXXXXXTGYTLPQYQQA 3
           P     VY         Y+LPQYQQA
Sbjct: 65  P-----VYPAAAPVAGVYSLPQYQQA 85


>ref|XP_010262343.1| PREDICTED: RNA-binding protein 42-like isoform X1 [Nelumbo
           nucifera] gi|720020250|ref|XP_010262344.1| PREDICTED:
           RNA-binding protein 42-like isoform X1 [Nelumbo
           nucifera]
          Length = 192

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 36/86 (41%), Positives = 47/86 (54%)
 Frame = -3

Query: 260 STSSQFTYSNGSYFPLPFHLXXXXXXQPDPMAAYQYPNSHIPPTPTYQIPAPAPSKILMP 81
           S S+ ++Y+NG YFP+PFHL      Q DP AA QY   ++PP P    P   P+  ++P
Sbjct: 14  SASAPYSYTNGPYFPVPFHL-----QQQDPTAAQQYTKPYVPPAP----PVKIPTASVIP 64

Query: 80  PPMHPSVYXXXXXXXTGYTLPQYQQA 3
           P     VY         Y+LPQYQQA
Sbjct: 65  P-----VYPAAAPVAGVYSLPQYQQA 85


>ref|XP_004152823.1| PREDICTED: RNA-binding protein 42 [Cucumis sativus]
           gi|700206151|gb|KGN61270.1| hypothetical protein
           Csa_2G075290 [Cucumis sativus]
          Length = 253

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 39/91 (42%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = -3

Query: 272 ASDGSTSSQFTYSNGSYFPLPFHLXXXXXXQPDPMAAYQYPNSHI-PPTPTYQIPAPAPS 96
           ++  S++SQFTYSNGSYFPLPFHL         P    QY + ++ PP P    P P P 
Sbjct: 10  SASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPP----QYSSPYVAPPGPP---PVPLPV 62

Query: 95  KILMPPPMHPSVYXXXXXXXTGYTLPQYQQA 3
             + P P  P            YTLPQYQQA
Sbjct: 63  APVYPAPAPPPAV---------YTLPQYQQA 84


>gb|KNA12341.1| hypothetical protein SOVF_126450 [Spinacia oleracea]
          Length = 245

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 40/91 (43%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = -3

Query: 272 ASDGSTSSQFTYSNGSYFPLPFHLXXXXXXQPDPMAAYQYPNSHIPPTPTYQIPAPAPSK 93
           +S  S SSQFTYSNGSYFP PFHL              Q P    PP P    P PA   
Sbjct: 7   SSSSSISSQFTYSNGSYFPTPFHL--------------QQPQYAAPPQP----PLPAAVS 48

Query: 92  ILMPPPMHPSVYXXXXXXXTG-YTLPQYQQA 3
           ++   P  PSV         G YTLPQ+QQA
Sbjct: 49  VI---PAAPSVVPSAYPAAPGVYTLPQFQQA 76


>ref|XP_010102230.1| hypothetical protein L484_024511 [Morus notabilis]
           gi|587904977|gb|EXB93173.1| hypothetical protein
           L484_024511 [Morus notabilis]
          Length = 249

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 36/87 (41%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = -3

Query: 260 STSSQFTYSNGS-YFPLPFHLXXXXXXQPDPMAAYQYPNSHIPPTPTYQIPAPAPSKILM 84
           ++SSQ+TY+NGS YFP+PFHL         P A  QYP ++   +    IP P       
Sbjct: 18  ASSSQYTYANGSSYFPMPFHL-------QQPSAVSQYPTAYAVGS---SIPIP------- 60

Query: 83  PPPMHPSVYXXXXXXXTGYTLPQYQQA 3
           PPP+   VY         Y+LPQYQQA
Sbjct: 61  PPPVAAPVYPAPAPVAGVYSLPQYQQA 87


>emb|CDO99991.1| unnamed protein product [Coffea canephora]
          Length = 250

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 34/90 (37%), Positives = 43/90 (47%)
 Frame = -3

Query: 272 ASDGSTSSQFTYSNGSYFPLPFHLXXXXXXQPDPMAAYQYPNSHIPPTPTYQIPAPAPSK 93
           +S  + SSQFTY+ G+YFP PFHL              Q P +++       IP     +
Sbjct: 11  SSSSAASSQFTYTTGTYFPTPFHL--------------QQPQTYVAAAAAASIP-----Q 51

Query: 92  ILMPPPMHPSVYXXXXXXXTGYTLPQYQQA 3
              PPP  P VY       T Y+LPQYQQA
Sbjct: 52  FPAPPPAVPHVYPAPATVPTVYSLPQYQQA 81


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