BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00034502
         (3091 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal doma...   789   0.0  
ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal doma...   716   0.0  
ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal doma...   709   0.0  
ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal doma...   708   0.0  
ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal doma...   705   0.0  
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ...   703   0.0  
ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphat...   703   0.0  
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              702   0.0  
gb|KJB77193.1| hypothetical protein B456_012G125200 [Gossypium r...   696   0.0  
gb|KJB77192.1| hypothetical protein B456_012G125200 [Gossypium r...   696   0.0  
ref|XP_012459417.1| PREDICTED: RNA polymerase II C-terminal doma...   696   0.0  
ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal doma...   690   0.0  
gb|KDO83172.1| hypothetical protein CISIN_1g000897mg [Citrus sin...   689   0.0  
gb|KDO83171.1| hypothetical protein CISIN_1g000897mg [Citrus sin...   689   0.0  
gb|KDO83165.1| hypothetical protein CISIN_1g000897mg [Citrus sin...   689   0.0  
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr...   688   0.0  
gb|KDO83166.1| hypothetical protein CISIN_1g000897mg [Citrus sin...   684   0.0  
ref|XP_011020855.1| PREDICTED: RNA polymerase II C-terminal doma...   681   0.0  
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu...   677   0.0  
ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Popu...   677   0.0  

>ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Nelumbo nucifera]
          Length = 1313

 Score =  789 bits (2037), Expect = 0.0
 Identities = 463/921 (50%), Positives = 572/921 (62%), Gaps = 68/921 (7%)
 Frame = -3

Query: 2999 NMGPEALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTRE------ILKPLSITKNQA 2838
            N   E  + GL+       GFGPL+D HR HD DSLPSPTR+      + KPLSI+    
Sbjct: 394  NTRSETSKAGLSFGSRSRIGFGPLLDLHRDHDADSLPSPTRKAPPPLPMQKPLSISDGTP 453

Query: 2837 QPNLPAISLADKSEDAIAQLCKSDALEVVSVYQPKFG--SNLLTDRLPNPIPSGELHDGN 2664
            + +L    + DK +D      ++DAL+ VS YQ KFG  S LL+DRLP+P PS E  DG+
Sbjct: 454  RSDLVTNIVEDKMDDTALHPYETDALKAVSTYQQKFGRTSLLLSDRLPSPTPSEECDDGD 513

Query: 2663 GDEEAQ-DLSDRVSSVPYMVSSTKETLV--------------------VGITGEMASDCP 2547
            GD   +   S  V  V  + SST    V                    VG  G M+S   
Sbjct: 514  GDINGEVSSSTTVGGVATINSSTSLKTVSSATSYADNLSGQGLVPAVSVGQLGSMSSHV- 572

Query: 2546 VLSCPARSSSLGPAHLEVVTPAVNXXXXXXXXXQ----PIGGMMNSKNCNIGEQSVLEGR 2379
            + +   R   L  A+ EV    +N              P+GG+M S+   I E+S+L+  
Sbjct: 573  IRTAKNRDPRLRYANSEVGPLDLNQRPPSGDHDIRKSEPLGGIMGSRKHKIVEESLLDDH 632

Query: 2378 SLKRQRNGFTPSDITEKTQPNEPSN----------------NNLSGNMKSDLRK-----A 2262
            + KRQRNG   S  +   Q    S                 + L    +SD RK     A
Sbjct: 633  TFKRQRNGLINSGASGDVQVVSGSGGWLEESSSMGLQPTDRSRLIEKRESDPRKLGSGEA 692

Query: 2261 EHGEKQLAISAIHNVQSSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVHLVKKYH-RLG 2085
              G KQ    + +NV +   EQ  + G  + VSLP L+KD+ VN T L+HL+K  H RL 
Sbjct: 693  SFGNKQDTGCSTYNVTTGGNEQLTASGIGSTVSLPSLLKDIAVNPTMLMHLIKMEHQRLA 752

Query: 2084 TNSQQKSGDSAKKATSLFSSTAIP--------LFKKYFNPREKPIVKPQITDETPTN-PQ 1932
              + QK G+ A+      SS+ +P          K    P +K     QI+ +T +  P 
Sbjct: 753  VEALQKCGNPAQSTMQSSSSSVMPGKIASVNIASKTLSEPEKKSAGNSQISVQTASMIPH 812

Query: 1931 GELSKIRLKDRDPRKNLHYGTFQQNKRSRFEQFEANGADPSVSQSGKDSFSLXXXXXXXX 1752
            G+L KIR+K RDPR+ LH  TFQ++  S  E+F+ANG     + + +D+  +        
Sbjct: 813  GDLGKIRMKPRDPRRILHSNTFQKSDSSGPERFKANGTPSPNTPTCRDNLIVRQQGEQAQ 872

Query: 1751 XXXXXXXXXXQLPDIASEFTKNLKNVADILSID---NTSVTVAEPVLSQQIPENMDRVEM 1581
                        PDIA +FTK LKN+A+ILS     NT   V + + SQ +P  MD+V+M
Sbjct: 873  TNSLLSQSTAP-PDIAQQFTKKLKNIANILSASQAINTPSVVPQTISSQPVPAKMDKVDM 931

Query: 1580 GIIATDCDNRQNKNCLPPEEHTKEPSQSPNPWGEMEHIFEGYDELQKATILXXXXXXXXE 1401
             ++ATD +++++ + L PEE    PS S N WG++EH+FEGYD+ QKA I         E
Sbjct: 932  KVVATDSNDQRSWSALTPEERAAGPS-SQNAWGDVEHLFEGYDDQQKAAIQRERARRIEE 990

Query: 1400 QNKMFAAKKXXXXXXXXXXXLNSAKFIEIDPVHQELLRMKEEKERGKSQRHLFRFPHMGM 1221
            QN+MFAA+K           LNSAKF+E+DPVH+E+LR KEE++R K QRHLFRF HMGM
Sbjct: 991  QNQMFAARKLCLVLDLDHTLLNSAKFVEVDPVHEEMLRKKEEQDREKPQRHLFRFTHMGM 1050

Query: 1220 WTKLRPGVWNFLEKASKLYELHLYTMGNKRYATEMAKLLDPSGALFSGRVISRGDDGESL 1041
            WTKLRPG+WNFLEKASKLYELHLYTMGNK YATEMAK+LDP+G LF+GRVISRGDDG+  
Sbjct: 1051 WTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGVLFAGRVISRGDDGDPF 1110

Query: 1040 DGDER-PKIKDLDGVLGMESAVVIIDDSVRVWPHYKLNMIAVERYIYFPCSRRQFGLLGP 864
            DGDER PK KDLDGVLGMESAVVIIDDSVRVWPH KLN+I VERY YFPCSRRQ GL GP
Sbjct: 1111 DGDERQPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQLGLHGP 1170

Query: 863  SLLEVGHDERSENGTLASSLAVIERIHRTFFSHQCLKNLDVRNILASEQKKILAGCCIVF 684
            SLLE+ HDER E+GTLASSLAVIERIH+ FFSHQ L ++DVRNILA+EQ+KILAGC IVF
Sbjct: 1171 SLLEIDHDERPEDGTLASSLAVIERIHQNFFSHQNLNDVDVRNILAAEQQKILAGCRIVF 1230

Query: 683  SRVFPVGLANPKLHPLWQTAEQFGAVCTNQIDERVTHIVATSLGTDKVNWALSSRRFVVQ 504
            SRVFPVG ANP LHPLWQTAEQFGAVCTNQIDE+VTH+VA SLGTDKVNWALS+ RFVV 
Sbjct: 1231 SRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEQVTHVVAISLGTDKVNWALSTGRFVVH 1290

Query: 503  PGWVEASAFLYRRADERAFAV 441
            PGWVEASA LYRRA+E  FA+
Sbjct: 1291 PGWVEASALLYRRANEHDFAI 1311


>ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X2 [Vitis vinifera]
          Length = 1276

 Score =  716 bits (1848), Expect = 0.0
 Identities = 432/929 (46%), Positives = 535/929 (57%), Gaps = 79/929 (8%)
 Frame = -3

Query: 2990 PEALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTREILKPLSITKNQAQPNLPAISL 2811
            P+AL+ GL+S + G   FGPL+D H+ HD DSLPSPT +  +   + K++    L    +
Sbjct: 374  PDALKPGLSSSR-GRFIFGPLLDLHKDHDEDSLPSPTGKAPQCFPVNKSE----LVTAKV 428

Query: 2810 ADKSEDAIAQLCKSDALEVVSVYQPKFG--SNLLTDRLPNPIPSGELHDGNGDEEAQDLS 2637
            A +++D+I    ++DAL+ VS YQ KFG  S L  D+LP+P PS E  D  GD   +  S
Sbjct: 429  AHETQDSIMHPYETDALKAVSTYQQKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSS 488

Query: 2636 DR-----------------VSSVPYMVSSTKETLVVGITGEMASDCPVLSCPARSSSLGP 2508
                               VSS P M SS  +   VG    + S  P L        + P
Sbjct: 489  SSTISAPITANAPALGHPIVSSAPQMDSSIVQGPTVGRNTSLVSSGPHLDSSVVQGLVVP 548

Query: 2507 AHLEVVTPAVNXXXXXXXXXQ-------------------------------PIGGMMNS 2421
             +   V    N         +                               P+G +++S
Sbjct: 549  RNTGAVNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSS 608

Query: 2420 KNCNIGEQSVLEGRSLKRQRNGFTPSDITEKTQ----------------PNEPSNNNLSG 2289
            +     E+ +L+G   KRQRNG T        Q                P   + N L  
Sbjct: 609  RKQKSAEEPLLDGPVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIE 668

Query: 2288 NMKSDLRKAEHGEKQLAISAIHN-VQSSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVH 2112
            N  +D +K E       I      V  +  E    + TS   SL  L+KD+ VN    ++
Sbjct: 669  NTGTDPKKLESKVTVTGIGCDKPYVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMN 728

Query: 2111 LVKKYHRLGTNSQQKSGDSAKKATSLFSSTAI-----PLFKKYFNPR---EKPIVKPQIT 1956
            +  K        QQKSGD AK      +S +I     P       P    +KP    Q+ 
Sbjct: 729  IFNKVE------QQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVP 782

Query: 1955 DETPTNPQGELSKIRLKDRDPRKNLHYGTFQQNKRSRFEQFEANGADPSVSQSGKDSFSL 1776
               P NPQ E  K+R+K RDPR+ LH  +FQ++  S  EQF+ N          K   S 
Sbjct: 783  QTGPMNPQDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTNAQKQEDQTETKSVPSH 842

Query: 1775 XXXXXXXXXXXXXXXXXXQLPDIASEFTKNLKNVADILSIDNTSV---TVAEPVLSQQIP 1605
                                PDI+ +FTKNLKN+AD++S    S    T  + + SQ + 
Sbjct: 843  SVNP----------------PDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQ 886

Query: 1604 ENMDRVEMGIIATDCDNRQNKNCLPPEEHTKEPSQSPNPWGEMEHIFEGYDELQKATILX 1425
             N DR+++    +D  ++   N   PE     P QS N WG++EH+F+GYD+ QKA I  
Sbjct: 887  VNTDRMDVKATVSDSGDQLTANGSKPES-AAGPPQSKNTWGDVEHLFDGYDDQQKAAIQR 945

Query: 1424 XXXXXXXEQNKMFAAKKXXXXXXXXXXXLNSAKFIEIDPVHQELLRMKEEKERGKSQRHL 1245
                   EQ KMF+A+K           LNSAKF+E+DPVH E+LR KEE++R KSQRHL
Sbjct: 946  ERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHL 1005

Query: 1244 FRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKRYATEMAKLLDPSGALFSGRVIS 1065
            FRFPHMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK YATEMAK+LDP G LF+GRVIS
Sbjct: 1006 FRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVIS 1065

Query: 1064 RGDDGESLDGDER-PKIKDLDGVLGMESAVVIIDDSVRVWPHYKLNMIAVERYIYFPCSR 888
            +GDDG+ LDGDER PK KDL+GVLGMESAVVIIDDSVRVWPH KLN+I VERY YFPCSR
Sbjct: 1066 KGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSR 1125

Query: 887  RQFGLLGPSLLEVGHDERSENGTLASSLAVIERIHRTFFSHQCLKNLDVRNILASEQKKI 708
            RQFGL GPSLLE+ HDER E+GTLASSLAVIERIH++FFS++ L  +DVRNILASEQ+KI
Sbjct: 1126 RQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKI 1185

Query: 707  LAGCCIVFSRVFPVGLANPKLHPLWQTAEQFGAVCTNQIDERVTHIVATSLGTDKVNWAL 528
            LAGC IVFSRVFPVG ANP LHPLWQTAE FGAVCTNQIDE+VTH+VA SLGTDKVNWAL
Sbjct: 1186 LAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWAL 1245

Query: 527  SSRRFVVQPGWVEASAFLYRRADERAFAV 441
            S+ RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 1246 STGRFVVHPGWVEASALLYRRANEQDFAI 1274


>ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X3 [Vitis vinifera]
          Length = 1273

 Score =  709 bits (1829), Expect = 0.0
 Identities = 429/929 (46%), Positives = 532/929 (57%), Gaps = 79/929 (8%)
 Frame = -3

Query: 2990 PEALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTREILKPLSITKNQAQPNLPAISL 2811
            P+AL+ GL+S + G   FGPL+D H+ HD DSLPSPT +  +   + K++    L    +
Sbjct: 374  PDALKPGLSSSR-GRFIFGPLLDLHKDHDEDSLPSPTGKAPQCFPVNKSE----LVTAKV 428

Query: 2810 ADKSEDAIAQLCKSDALEVVSVYQPKFG--SNLLTDRLPNPIPSGELHDGNGDEEAQDLS 2637
            A +++D+I    ++DAL+ VS YQ KFG  S L  D+LP+P PS E  D  GD   +  S
Sbjct: 429  AHETQDSIMHPYETDALKAVSTYQQKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSS 488

Query: 2636 DR-----------------VSSVPYMVSSTKETLVVGITGEMASDCPVLSCPARSSSLGP 2508
                               VSS P M SS  +   VG    + S  P L        + P
Sbjct: 489  SSTISAPITANAPALGHPIVSSAPQMDSSIVQGPTVGRNTSLVSSGPHLDSSVVQGLVVP 548

Query: 2507 AHLEVVTPAVNXXXXXXXXXQ-------------------------------PIGGMMNS 2421
             +   V    N         +                               P+G +++S
Sbjct: 549  RNTGAVNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSS 608

Query: 2420 KNCNIGEQSVLEGRSLKRQRNGFTPSDITEKTQ----------------PNEPSNNNLSG 2289
            +     E+ +L+G   KRQRNG T        Q                P   + N L  
Sbjct: 609  RKQKSAEEPLLDGPVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIE 668

Query: 2288 NMKSDLRKAEHGEKQLAISAIHN-VQSSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVH 2112
            N  +D +K E       I      V  +  E    + TS   SL  L+KD+ VN    ++
Sbjct: 669  NTGTDPKKLESKVTVTGIGCDKPYVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMN 728

Query: 2111 LVKKYHRLGTNSQQKSGDSAKKATSLFSSTAIPLFKKYFNPREKPIVKPQITDETP---- 1944
            +  K        QQKSGD AK      +S +I        P     +KP    + P    
Sbjct: 729  IFNKVE------QQKSGDPAKNTVLPPTSNSI---LGVVPPASVAPLKPSALGQKPAGAL 779

Query: 1943 ----TNPQGELSKIRLKDRDPRKNLHYGTFQQNKRSRFEQFEANGADPSVSQSGKDSFSL 1776
                T P  E  K+R+K RDPR+ LH  +FQ++  S  EQF+ N          K   S 
Sbjct: 780  QVPQTGPMDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTNAQKQEDQTETKSVPSH 839

Query: 1775 XXXXXXXXXXXXXXXXXXQLPDIASEFTKNLKNVADILSIDNTSV---TVAEPVLSQQIP 1605
                                PDI+ +FTKNLKN+AD++S    S    T  + + SQ + 
Sbjct: 840  SVNP----------------PDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQ 883

Query: 1604 ENMDRVEMGIIATDCDNRQNKNCLPPEEHTKEPSQSPNPWGEMEHIFEGYDELQKATILX 1425
             N DR+++    +D  ++   N   PE     P QS N WG++EH+F+GYD+ QKA I  
Sbjct: 884  VNTDRMDVKATVSDSGDQLTANGSKPES-AAGPPQSKNTWGDVEHLFDGYDDQQKAAIQR 942

Query: 1424 XXXXXXXEQNKMFAAKKXXXXXXXXXXXLNSAKFIEIDPVHQELLRMKEEKERGKSQRHL 1245
                   EQ KMF+A+K           LNSAKF+E+DPVH E+LR KEE++R KSQRHL
Sbjct: 943  ERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHL 1002

Query: 1244 FRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKRYATEMAKLLDPSGALFSGRVIS 1065
            FRFPHMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK YATEMAK+LDP G LF+GRVIS
Sbjct: 1003 FRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVIS 1062

Query: 1064 RGDDGESLDGDER-PKIKDLDGVLGMESAVVIIDDSVRVWPHYKLNMIAVERYIYFPCSR 888
            +GDDG+ LDGDER PK KDL+GVLGMESAVVIIDDSVRVWPH KLN+I VERY YFPCSR
Sbjct: 1063 KGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSR 1122

Query: 887  RQFGLLGPSLLEVGHDERSENGTLASSLAVIERIHRTFFSHQCLKNLDVRNILASEQKKI 708
            RQFGL GPSLLE+ HDER E+GTLASSLAVIERIH++FFS++ L  +DVRNILASEQ+KI
Sbjct: 1123 RQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKI 1182

Query: 707  LAGCCIVFSRVFPVGLANPKLHPLWQTAEQFGAVCTNQIDERVTHIVATSLGTDKVNWAL 528
            LAGC IVFSRVFPVG ANP LHPLWQTAE FGAVCTNQIDE+VTH+VA SLGTDKVNWAL
Sbjct: 1183 LAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWAL 1242

Query: 527  SSRRFVVQPGWVEASAFLYRRADERAFAV 441
            S+ RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 1243 STGRFVVHPGWVEASALLYRRANEQDFAI 1271


>ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X1 [Vitis vinifera]
          Length = 1285

 Score =  708 bits (1828), Expect = 0.0
 Identities = 432/938 (46%), Positives = 535/938 (57%), Gaps = 88/938 (9%)
 Frame = -3

Query: 2990 PEALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTREILKPLSITKNQAQPNLPAISL 2811
            P+AL+ GL+S + G   FGPL+D H+ HD DSLPSPT +  +   + K++    L    +
Sbjct: 374  PDALKPGLSSSR-GRFIFGPLLDLHKDHDEDSLPSPTGKAPQCFPVNKSE----LVTAKV 428

Query: 2810 ADKSEDAIAQLCKSDALEVVSVYQPKFG--SNLLTDRLPNPIPSGELHDGNGDEEAQDLS 2637
            A +++D+I    ++DAL+ VS YQ KFG  S L  D+LP+P PS E  D  GD   +  S
Sbjct: 429  AHETQDSIMHPYETDALKAVSTYQQKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSS 488

Query: 2636 DR-----------------VSSVPYMVSSTKETLVVGITGEMASDCPVLSCPARSSSLGP 2508
                               VSS P M SS  +   VG    + S  P L        + P
Sbjct: 489  SSTISAPITANAPALGHPIVSSAPQMDSSIVQGPTVGRNTSLVSSGPHLDSSVVQGLVVP 548

Query: 2507 AHLEVVTPAVNXXXXXXXXXQ-------------------------------PIGGMMNS 2421
             +   V    N         +                               P+G +++S
Sbjct: 549  RNTGAVNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSS 608

Query: 2420 KNCNIGEQSVLEGRSLKRQRNGFTPSDITEKTQ----------------PNEPSNNNLSG 2289
            +     E+ +L+G   KRQRNG T        Q                P   + N L  
Sbjct: 609  RKQKSAEEPLLDGPVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIE 668

Query: 2288 NMKSDLRKAEHGEKQLAISAIHN-VQSSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVH 2112
            N  +D +K E       I      V  +  E    + TS   SL  L+KD+ VN    ++
Sbjct: 669  NTGTDPKKLESKVTVTGIGCDKPYVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMN 728

Query: 2111 LVKKYHRLGTNSQQKSGDSAKKATSLFSSTAI-----PLFKKYFNPR---EKPIVKPQIT 1956
            +  K        QQKSGD AK      +S +I     P       P    +KP    Q+ 
Sbjct: 729  IFNKVE------QQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVP 782

Query: 1955 DETPT---------NPQGELSKIRLKDRDPRKNLHYGTFQQNKRSRFEQFEANGADPSVS 1803
               P          NPQ E  K+R+K RDPR+ LH  +FQ++  S  EQF+ N       
Sbjct: 783  QTGPMLVTSCNNAQNPQDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTNAQKQEDQ 842

Query: 1802 QSGKDSFSLXXXXXXXXXXXXXXXXXXQLPDIASEFTKNLKNVADILSIDNTSV---TVA 1632
               K   S                     PDI+ +FTKNLKN+AD++S    S    T  
Sbjct: 843  TETKSVPSHSVNP----------------PDISQQFTKNLKNIADLMSASQASSMTPTFP 886

Query: 1631 EPVLSQQIPENMDRVEMGIIATDCDNRQNKNCLPPEEHTKEPSQSPNPWGEMEHIFEGYD 1452
            + + SQ +  N DR+++    +D  ++   N   PE     P QS N WG++EH+F+GYD
Sbjct: 887  QILSSQSVQVNTDRMDVKATVSDSGDQLTANGSKPES-AAGPPQSKNTWGDVEHLFDGYD 945

Query: 1451 ELQKATILXXXXXXXXEQNKMFAAKKXXXXXXXXXXXLNSAKFIEIDPVHQELLRMKEEK 1272
            + QKA I         EQ KMF+A+K           LNSAKF+E+DPVH E+LR KEE+
Sbjct: 946  DQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQ 1005

Query: 1271 ERGKSQRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKRYATEMAKLLDPSG 1092
            +R KSQRHLFRFPHMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK YATEMAK+LDP G
Sbjct: 1006 DREKSQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKG 1065

Query: 1091 ALFSGRVISRGDDGESLDGDER-PKIKDLDGVLGMESAVVIIDDSVRVWPHYKLNMIAVE 915
             LF+GRVIS+GDDG+ LDGDER PK KDL+GVLGMESAVVIIDDSVRVWPH KLN+I VE
Sbjct: 1066 VLFAGRVISKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVE 1125

Query: 914  RYIYFPCSRRQFGLLGPSLLEVGHDERSENGTLASSLAVIERIHRTFFSHQCLKNLDVRN 735
            RY YFPCSRRQFGL GPSLLE+ HDER E+GTLASSLAVIERIH++FFS++ L  +DVRN
Sbjct: 1126 RYTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRN 1185

Query: 734  ILASEQKKILAGCCIVFSRVFPVGLANPKLHPLWQTAEQFGAVCTNQIDERVTHIVATSL 555
            ILASEQ+KILAGC IVFSRVFPVG ANP LHPLWQTAE FGAVCTNQIDE+VTH+VA SL
Sbjct: 1186 ILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSL 1245

Query: 554  GTDKVNWALSSRRFVVQPGWVEASAFLYRRADERAFAV 441
            GTDKVNWALS+ RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 1246 GTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 1283


>ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Jatropha curcas] gi|643708360|gb|KDP23276.1|
            hypothetical protein JCGZ_23109 [Jatropha curcas]
          Length = 1283

 Score =  705 bits (1820), Expect = 0.0
 Identities = 438/926 (47%), Positives = 543/926 (58%), Gaps = 73/926 (7%)
 Frame = -3

Query: 2999 NMGPEALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTREILKPLSITKNQAQPNLPA 2820
            NM  EA + G+++ K    G  PL+D H+ HD DSLPSPTRE   PL + +     + P 
Sbjct: 384  NMSLEAPKMGVSTFK-SRAGLLPLLDLHKDHDADSLPSPTREAAPPLPVRR----VSTPK 438

Query: 2819 ISLADKSEDAIAQLCKSDALEVVSVYQPKFG--SNLLTDRLPNPIPSGELHDGNGDEEAQ 2646
            ++L   +ED      ++DAL+ VS YQ KF   S  + DRLP+P PS E  +G+GD   +
Sbjct: 439  VAL--DNEDTKMHPYETDALKAVSSYQQKFNRSSFAVNDRLPSPTPSEESGNGDGDVGGE 496

Query: 2645 DLSDR-----------------VSSVPYMVSSTKETLVVGITGEMASDCPVLSCPARSSS 2517
              S                   VS+ P+  SS  + +V        S    L+  A + S
Sbjct: 497  VSSSSAVGQFRPANPPNSGQSIVSTSPHPESSNMQGVVPAKNAGPVSSGSSLTVKASAKS 556

Query: 2516 LGPAHLEV-----------VTPAVNXXXXXXXXXQPIGGMMNSKNCNIGEQSVLEGRSLK 2370
              P    V           V P VN           +GG MN K     + SVL+G SLK
Sbjct: 557  RDPRLRFVNSDANALDQNHVLPLVNNTPKVEY----LGGPMNLKKQKSVDDSVLDGPSLK 612

Query: 2369 RQRNGFTPS----------------DITEKTQPNEPSNNNLSGNMKSDLRKAEHGEK-QL 2241
            RQRN    S                + T+  +P   + N L  N  SD R+ ++G     
Sbjct: 613  RQRNVLEHSGGVGNVKTMIASGGWLEDTDMVRPQTMNRNQLVEN--SDPRRMDNGVACPS 670

Query: 2240 AISAIHNVQSSEREQFASLGT-------------SNAVSLPDLIKDVGVNSTTLVHLVK- 2103
             +S I +V  S  EQ   +GT             ++  SLPDL+K++ VN T L++L+K 
Sbjct: 671  TVSGISSVSISGNEQKPVIGTGAITEGEQIQMTGTSEASLPDLLKNIAVNPTMLLNLLKM 730

Query: 2102 -KYHRLGTNSQQKSGDSAKKATSLFSSTAIPLFKKYFNP-REKPIVKPQITDETPTNPQG 1929
             +  R   ++QQK  D AK +    ++ AI       N    +P V P+        PQ 
Sbjct: 731  GQQQRSAIDAQQKPSDPAKTSKHPLNANAILGSVPVVNVVPPQPSVMPRPAGTLQVPPQA 790

Query: 1928 ---ELSKIRLKDRDPRKNLHYGTFQQNKRSRFEQFEANGADPSVSQSGKDSFSLXXXXXX 1758
               EL KIR+K RDPR+ LHY T Q+N    +EQF+ N   P   Q  KD+  +      
Sbjct: 791  AVEELGKIRMKPRDPRRVLHYQTLQKNGNMGYEQFKTNLTSPPTDQGTKDN-QIVQKQDG 849

Query: 1757 XXXXXXXXXXXXQLPDIASEFTKNLKNVADILSIDNTSVTVAEPVLSQQIPENMDRVEMG 1578
                         +PDI+  FTK+LKN+ADI+S+ + S +    V+SQ +     R  + 
Sbjct: 850  QAETEPVPLQSLVVPDISLPFTKSLKNIADIVSVSHASTSPT--VVSQNLASQPTRTIVS 907

Query: 1577 IIATDCDNRQNKNCLPPEEHTKEPSQSP------NPWGEMEHIFEGYDELQKATILXXXX 1416
                        N   P      P  +P      + WG++EH+FEGY + QKA I     
Sbjct: 908  ------------NSEQPAGIGSAPCVAPVGPRPQDAWGDVEHLFEGYSDQQKAAIQRERA 955

Query: 1415 XXXXEQNKMFAAKKXXXXXXXXXXXLNSAKFIEIDPVHQELLRMKEEKERGKSQRHLFRF 1236
                EQ KMFAA+K           LNSAKF+E+DPVH E+LR KEE++R K  RHLFRF
Sbjct: 956  RRIEEQKKMFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRF 1015

Query: 1235 PHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKRYATEMAKLLDPSGALFSGRVISRGD 1056
            PHMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK YATEMAK+LDP+G LF+GRVISRGD
Sbjct: 1016 PHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGVLFNGRVISRGD 1075

Query: 1055 DGESLDGDER-PKIKDLDGVLGMESAVVIIDDSVRVWPHYKLNMIAVERYIYFPCSRRQF 879
            D +S D DER PK KDL+GVLGMESAVVIIDDSVRVWPH KLN+I VERYIYFPCSRRQF
Sbjct: 1076 DTDSFDSDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQF 1135

Query: 878  GLLGPSLLEVGHDERSENGTLASSLAVIERIHRTFFSHQCLKNLDVRNILASEQKKILAG 699
            GL GPSLLE+ HDER E+GTLA SLAVIE+IH+ FF+H  L + DVRNILASEQ+KILAG
Sbjct: 1136 GLPGPSLLEIDHDERPEDGTLACSLAVIEKIHQHFFTHPSLDDADVRNILASEQRKILAG 1195

Query: 698  CCIVFSRVFPVGLANPKLHPLWQTAEQFGAVCTNQIDERVTHIVATSLGTDKVNWALSSR 519
            C IVFSRVFPVG ANP LHPLWQTAEQFGAVCTNQIDE+VTH+VA SLGTDKVNWALS+ 
Sbjct: 1196 CRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTG 1255

Query: 518  RFVVQPGWVEASAFLYRRADERAFAV 441
            RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 1256 RFVVYPGWVEASALLYRRANEQDFAI 1281


>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
            gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
            phosphatase, putative [Ricinus communis]
          Length = 1195

 Score =  703 bits (1814), Expect = 0.0
 Identities = 430/926 (46%), Positives = 540/926 (58%), Gaps = 68/926 (7%)
 Frame = -3

Query: 3014 VHIERNMGPEALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTREILKPLSITKNQAQ 2835
            V+ + N+  E  +TG++S K       PL+D H+ HD DSLPSPTRE   PL      A 
Sbjct: 288  VNNKANLSIEGPKTGVSSFK-SRAALLPLLDLHKDHDADSLPSPTRESALPLP-----AY 341

Query: 2834 PNLPAISLADKSEDAIAQLCKSDALEVVSVYQPKFGSN--LLTDRLPNPIPSGELHDGNG 2661
              L    + D     +    ++DAL+ VS YQ KF  +   LTDRLP+P PS E  +G+G
Sbjct: 342  RVLTPKMVLDTGNSRMHPY-ETDALKAVSSYQQKFSKSSFALTDRLPSPTPSEESGNGDG 400

Query: 2660 D---EEAQDLS---------------DRVSSVPYMVSSTKETLVVGITGEMASDCPVLSC 2535
            D   E +  LS               +   S+P M  S+   ++   +   AS  P L+ 
Sbjct: 401  DTGGEVSSSLSVSSFRPANPLTSGQSNASISLPRMDGSSLPGVISIKSAVRASSAPSLTV 460

Query: 2534 PARSSSLGPAHLEV------------VTPAVNXXXXXXXXXQPIGGMMNSKNCNIGEQSV 2391
             A + S  P    V              P VN          PIGG MN K   I +  +
Sbjct: 461  KASAKSRDPRLRFVNSDSNALDQNHRAVPVVNTLKVE-----PIGGTMNKKRQKIVDDPI 515

Query: 2390 LEGRSLKRQRNGFTPSDI----------------TEKTQPNEPSNNNLSGNMKSDLRKAE 2259
             +G SLKRQ+N    S +                T+   P   + N L  N +SD R+ +
Sbjct: 516  PDGHSLKRQKNALENSGVVRDVKTMVGSGGWLEDTDMVGPQTMNKNQLVDNAESDPRRKD 575

Query: 2258 HGEKQLAISAIHNVQSSEREQFASLGTS------------NAVSLPDLIKDVGVNSTTLV 2115
             G    + S I +V  S  EQ    GTS            +  ++PDL+K++ VN T L+
Sbjct: 576  GGGVCTSSSCISSVNISGTEQIPVTGTSVPIGGELVPVKGSTAAIPDLLKNIAVNPTMLI 635

Query: 2114 HLVK--KYHRLGTNSQQKSGDSAKKATSLFSSTAIPLFKKYFNPREKPIVKPQITDETPT 1941
            +++K  +  RL   +QQK  D AK  T   +S ++             I+ P+       
Sbjct: 636  NILKMGQQQRLALEAQQKPVDPAKSTTYPLNSNSMLGTVPVVGAAHSGIL-PRPAGTVQV 694

Query: 1940 NPQ----GELSKIRLKDRDPRKNLHYGTFQQNKRSRFEQFEANGADPSVSQSGKDSFSLX 1773
            +PQ     +L KIR+K RDPR+ LH    Q+N     E  + N     ++Q  KD+ +L 
Sbjct: 695  SPQLGTADDLGKIRMKPRDPRRVLHNNALQRNGSMGSEHLKTNLTSIPINQETKDNQNLQ 754

Query: 1772 XXXXXXXXXXXXXXXXXQLPDIASEFTKNLKNVADILSIDNTSVTVAEPVLSQQIPENMD 1593
                              LPDI+  FTKNLKN+ADI+S+ + S +  +P+    +P+N  
Sbjct: 755  KQEGQVEKKPVPLQSLA-LPDISMPFTKNLKNIADIVSVSHASTS--QPL----VPQNPA 807

Query: 1592 RVEMGIIATDCDNRQNKNCLPPEEHTKEPS-QSPNPWGEMEHIFEGYDELQKATILXXXX 1416
               M    +  D        P          ++ N WG++EH+FEGY++ QKA I     
Sbjct: 808  SQPMRTTISSSDQFLGIGSAPGAAAAAAAGPRTQNAWGDVEHLFEGYNDQQKAAIQRERA 867

Query: 1415 XXXXEQNKMFAAKKXXXXXXXXXXXLNSAKFIEIDPVHQELLRMKEEKERGKSQRHLFRF 1236
                EQ K+F+A+K           LNSAKF+E+DPVH E+LR KEE++R K+ RHLFRF
Sbjct: 868  RRIEEQKKLFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKAHRHLFRF 927

Query: 1235 PHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKRYATEMAKLLDPSGALFSGRVISRGD 1056
            PHMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK YATEMAK+LDP+G LF+GRVISRGD
Sbjct: 928  PHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGVLFNGRVISRGD 987

Query: 1055 DGESLDGDER-PKIKDLDGVLGMESAVVIIDDSVRVWPHYKLNMIAVERYIYFPCSRRQF 879
            DGE  DGDER PK KDL+GVLGMES VVI+DDSVRVWPH KLN+I VERYIYFPCSRRQF
Sbjct: 988  DGEPFDGDERIPKSKDLEGVLGMESGVVIMDDSVRVWPHNKLNLIVVERYIYFPCSRRQF 1047

Query: 878  GLLGPSLLEVGHDERSENGTLASSLAVIERIHRTFFSHQCLKNLDVRNILASEQKKILAG 699
            GL GPSLLE+ HDER E+GTLA SLAVIERIH+ FF+H  L   DVRNILASEQ+KILAG
Sbjct: 1048 GLPGPSLLEIDHDERPEDGTLACSLAVIERIHQNFFTHPSLDEADVRNILASEQRKILAG 1107

Query: 698  CCIVFSRVFPVGLANPKLHPLWQTAEQFGAVCTNQIDERVTHIVATSLGTDKVNWALSSR 519
            C IVFSRVFPVG ANP LHPLWQTAEQFGAVCTNQIDE+VTH+VA SLGTDKVNWALS+ 
Sbjct: 1108 CRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTG 1167

Query: 518  RFVVQPGWVEASAFLYRRADERAFAV 441
            RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 1168 RFVVYPGWVEASALLYRRANEQDFAI 1193


>ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
            [Theobroma cacao] gi|508707765|gb|EOX99661.1| RNA
            polymerase II C-terminal domain phosphatase-like 3,
            putative [Theobroma cacao]
          Length = 1290

 Score =  703 bits (1814), Expect = 0.0
 Identities = 436/929 (46%), Positives = 549/929 (59%), Gaps = 66/929 (7%)
 Frame = -3

Query: 3029 SVKPRVHIERNMGPEALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTREILKPLSIT 2850
            S K  ++ + N   E L+ G+ + +   G   PL+D H+ HD DSLPSPTRE    L + 
Sbjct: 366  SAKFVINNKPNALTETLKPGVPNFR-NRGISLPLLDLHKDHDADSLPSPTRETTPCLPVN 424

Query: 2849 KNQAQPNLPAIS---LADKSEDAIAQLC---KSDALEVVSVYQPKFG--SNLLTDRLPNP 2694
            K     ++   S       S DA        ++DAL+  S YQ KFG  S   +DRLP+P
Sbjct: 425  KPLTSGDVMVKSGFMTGKGSHDAEGDKLHPYETDALKAFSTYQQKFGQGSFFSSDRLPSP 484

Query: 2693 IPSGELHDGNGDEEAQDLSDR----------------VSSVPYMVSSTKETLVVGITGEM 2562
             PS E  D  GD   +  S                  VSS P +V S   +L   IT   
Sbjct: 485  TPSEESGDEGGDNGGEVSSSSSIGNFKPNLPILGHPIVSSAP-LVDSASSSLQGQITTRN 543

Query: 2561 ASDCPVLS-------CPARSSSLGPAHLEVVTPAVNXXXXXXXXXQ-PIGGMMNSKNCNI 2406
            A+    +S         +R   L  A+       +N           P+GG+M+S+    
Sbjct: 544  ATPMSSVSNIVSKSLAKSRDPRLWFANSNASALDLNERLLHNASKVAPVGGIMDSRKKKS 603

Query: 2405 GEQSVLEGRSLKRQRNGF----------TPSDI------TEKTQPNEPSNNNLSGNMKSD 2274
             E+ +L+  +LKRQRN            T S I      T+       + N  + N++S+
Sbjct: 604  VEEPILDSPALKRQRNELENLGVARDVQTVSGIGGWLEDTDAIGSQITNRNQTAENLESN 663

Query: 2273 LRKAEHG-EKQLAISAIHNVQSSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVHLVK-- 2103
             RK ++G      +S   N+     EQ     TS   SLP L+KD+ VN T L++++K  
Sbjct: 664  SRKMDNGVTSSSTLSGKTNITVGTNEQVPVTSTSTP-SLPALLKDIAVNPTMLINILKMG 722

Query: 2102 KYHRLGTNSQQKSGDSAKKATSLFSSTAIPLFKKYFNPREKPIVK--PQITDETPTNPQG 1929
            +  RLG  +QQKS D  K      SS ++       N    P V   P I+    + P G
Sbjct: 723  QQQRLGAEAQQKSPDPVKSTFHQPSSNSLLGVVSSTNVIPSPSVNNVPSISSGISSKPAG 782

Query: 1928 ELS--------KIRLKDRDPRKNLHYGTFQQNKRSRFEQFEANGADPSVSQSGKDSFSLX 1773
             L         KIR+K RDPR+ LH  + Q++     +Q + NGA  S +Q  KD+ +  
Sbjct: 783  NLQVPSPDESGKIRMKPRDPRRVLHGNSLQRSGSMGLDQLKTNGALTSSTQGSKDNLNAQ 842

Query: 1772 XXXXXXXXXXXXXXXXXQLPDIASEFTKNLKNVADILSIDNTSVTVAEPVLSQQIPENM- 1596
                               PDI  +FT NLKN+ADI+S+   ++T   PV    +P+ + 
Sbjct: 843  KLDSQTESKPMQSQLVPP-PDITQQFTNNLKNIADIMSVSQ-ALTSLPPVSHNLVPQPVL 900

Query: 1595 ---DRVEMGIIATDCDNRQNKNCLPPEEHTKEPSQSPNPWGEMEHIFEGYDELQKATILX 1425
               D ++M  + ++ +++Q    L PE     P +S N WG++EH+FE YD+ QKA I  
Sbjct: 901  IKSDSMDMKALVSNSEDQQTGAGLAPEAGATGP-RSQNAWGDVEHLFERYDDQQKAAIQR 959

Query: 1424 XXXXXXXEQNKMFAAKKXXXXXXXXXXXLNSAKFIEIDPVHQELLRMKEEKERGKSQRHL 1245
                   EQ KMF+A+K           LNSAKFIE+DPVH+E+LR KEE++R K +RHL
Sbjct: 960  ERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFIEVDPVHEEILRKKEEQDREKPERHL 1019

Query: 1244 FRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKRYATEMAKLLDPSGALFSGRVIS 1065
            FRF HMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK YATEMAK+LDP G LF+GRVIS
Sbjct: 1020 FRFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVIS 1079

Query: 1064 RGDDGESLDGDER-PKIKDLDGVLGMESAVVIIDDSVRVWPHYKLNMIAVERYIYFPCSR 888
            RGDDG+  DGDER P+ KDL+GVLGMESAVVIIDDSVRVWPH KLN+I VERY YFPCSR
Sbjct: 1080 RGDDGDPFDGDERVPRSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSR 1139

Query: 887  RQFGLLGPSLLEVGHDERSENGTLASSLAVIERIHRTFFSHQCLKNLDVRNILASEQKKI 708
            RQFGLLGPSLLE+ HDER E+GTLASSLAVIERIH+ FFSHQ L ++DVRNILASEQ+KI
Sbjct: 1140 RQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHQDFFSHQNLDDVDVRNILASEQRKI 1199

Query: 707  LAGCCIVFSRVFPVGLANPKLHPLWQTAEQFGAVCTNQIDERVTHIVATSLGTDKVNWAL 528
            LAGC IVFSRVFPVG ANP LHPLWQTAEQFGAVCTNQIDE VTH+VA SLGTDKVNWAL
Sbjct: 1200 LAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWAL 1259

Query: 527  SSRRFVVQPGWVEASAFLYRRADERAFAV 441
            S+ +FVV PGWVEASA LYRRA+E  FA+
Sbjct: 1260 STGKFVVHPGWVEASALLYRRANEVDFAI 1288


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  702 bits (1813), Expect = 0.0
 Identities = 424/878 (48%), Positives = 527/878 (60%), Gaps = 45/878 (5%)
 Frame = -3

Query: 2939 FGPLVDFHRHHDMDSLPSPTREILKPLSITKNQAQPNLPAISLADKSEDAIAQLCKSDAL 2760
            FGPL+D H+ HD DSLPSPT +  +   + K++    L    +A +++D+I    ++DAL
Sbjct: 362  FGPLLDLHKDHDEDSLPSPTGKAPQCFPVNKSE----LVTAKVAHETQDSIMHPYETDAL 417

Query: 2759 EVVSVYQPKFG--SNLLTDRLPNPIPSGELHDGNGDEEAQDLSDRVSSVPY--------- 2613
            + VS YQ KFG  S L  D+LP+P PS E  D  GD   +  S    S P          
Sbjct: 418  KAVSTYQQKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGH 477

Query: 2612 -MVSSTKET-LVVGI-----TGEMASDC-PVLSCPARS---------SSLGPAHL-EVVT 2487
             +VSS  +  +V G+     TG + S    +L   A+S         S  G   L E   
Sbjct: 478  PIVSSAPQMDIVQGLVVPRNTGAVNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPL 537

Query: 2486 PAVNXXXXXXXXXQPIGGMMNSKNCNIGEQSVLEGRSLKRQRNGFTPSDITEKTQPNEPS 2307
            PAV+          P+G +++S+     E+ +L+G   KRQRNG T              
Sbjct: 538  PAVSNSPKVD----PLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTSP------------ 581

Query: 2306 NNNLSGNMKSDLRKAEHGEKQLAISAIH----NVQSSEREQFASLGTSNAVSLPDLIKDV 2139
                          A   E ++ ++ I      V  +  E    + TS   SL  L+KD+
Sbjct: 582  --------------ATKLESKVTVTGIGCDKPYVTVNGNEHLPVVATSTTASLQSLLKDI 627

Query: 2138 GVNSTTLVHLVKKYHRLGTNSQQKSGDSAKKATSLFSSTAI-----PLFKKYFNPR---E 1983
             VN    +++  K        QQKSGD AK      +S +I     P       P    +
Sbjct: 628  AVNPAVWMNIFNKVE------QQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQ 681

Query: 1982 KPIVKPQITDETPTNPQGELSKIRLKDRDPRKNLHYGTFQQNKRSRFEQFEANGADPSVS 1803
            KP    Q+    P NPQ E  K+R+K RDPR+ LH  +FQ++  S  EQF+ N       
Sbjct: 682  KPAGALQVPQTGPMNPQDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTNAQKQEDQ 741

Query: 1802 QSGKDSFSLXXXXXXXXXXXXXXXXXXQLPDIASEFTKNLKNVADILSIDNTSV---TVA 1632
               K   S                     PDI+ +FTKNLKN+AD++S    S    T  
Sbjct: 742  TETKSVPSHSVNP----------------PDISQQFTKNLKNIADLMSASQASSMTPTFP 785

Query: 1631 EPVLSQQIPENMDRVEMGIIATDCDNRQNKNCLPPEEHTKEPSQSPNPWGEMEHIFEGYD 1452
            + + SQ +  N DR+++    +D  ++   N   PE     P QS N WG++EH+F+GYD
Sbjct: 786  QILSSQSVQVNTDRMDVKATVSDSGDQLTANGSKPES-AAGPPQSKNTWGDVEHLFDGYD 844

Query: 1451 ELQKATILXXXXXXXXEQNKMFAAKKXXXXXXXXXXXLNSAKFIEIDPVHQELLRMKEEK 1272
            + QKA I         EQ KMF+A+K           LNSAKF+E+DPVH E+LR KEE+
Sbjct: 845  DQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQ 904

Query: 1271 ERGKSQRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKRYATEMAKLLDPSG 1092
            +R KSQRHLFRFPHMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK YATEMAK+LDP G
Sbjct: 905  DREKSQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKG 964

Query: 1091 ALFSGRVISRGDDGESLDGDER-PKIKDLDGVLGMESAVVIIDDSVRVWPHYKLNMIAVE 915
             LF+GRVIS+GDDG+ LDGDER PK KDL+GVLGMESAVVIIDDSVRVWPH KLN+I VE
Sbjct: 965  VLFAGRVISKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVE 1024

Query: 914  RYIYFPCSRRQFGLLGPSLLEVGHDERSENGTLASSLAVIERIHRTFFSHQCLKNLDVRN 735
            RY YFPCSRRQFGL GPSLLE+ HDER E+GTLASSLAVIERIH++FFS++ L  +DVRN
Sbjct: 1025 RYTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRN 1084

Query: 734  ILASEQKKILAGCCIVFSRVFPVGLANPKLHPLWQTAEQFGAVCTNQIDERVTHIVATSL 555
            ILASEQ+KILAGC IVFSRVFPVG ANP LHPLWQTAE FGAVCTNQIDE+VTH+VA SL
Sbjct: 1085 ILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSL 1144

Query: 554  GTDKVNWALSSRRFVVQPGWVEASAFLYRRADERAFAV 441
            GTDKVNWALS+ RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 1145 GTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 1182


>gb|KJB77193.1| hypothetical protein B456_012G125200 [Gossypium raimondii]
          Length = 982

 Score =  696 bits (1795), Expect = 0.0
 Identities = 428/932 (45%), Positives = 545/932 (58%), Gaps = 68/932 (7%)
 Frame = -3

Query: 3032 ISVKPRVHIERNMGPEALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTRE------I 2871
            +SV   +H   N+  EAL+ G+ + +   G   PL+D H+ HD DSLPSPTRE      +
Sbjct: 51   LSVDSEIHNMPNILTEALKPGVPNFR-NKGLSLPLLDLHKDHDADSLPSPTRETTPCLPV 109

Query: 2870 LKPLSITKNQAQPNLPAISLADKSEDAIAQLCKSDALEVVSVYQPKFG--SNLLTDRLPN 2697
            L+PL+      +           +E       ++DAL+  S YQ KFG  S   +DRLP+
Sbjct: 110  LRPLTTGDGMVRSGFMMAKGLPDAERNKMHPYETDALKAFSSYQRKFGRGSFFSSDRLPS 169

Query: 2696 PIPSGELHDGNGDEEAQDLSDR----------------VSSVPYMVSSTKETLVVG---- 2577
            P PS E  D   D   +  S                  VSS P++ S++  + + G    
Sbjct: 170  PTPSEESGDEGCDTGGEVSSSSSIGNFKPNLPVMGHPIVSSAPHIDSASSTSSMQGQFTT 229

Query: 2576 -----ITGEMASDC-PVLSCPARSSSLGPAHLEVVTPAVNXXXXXXXXXQP-IGGMMNSK 2418
                 +T   AS+     S  +R   L  A+  V    +N          P + G+M+ +
Sbjct: 230  QNATPVTVSSASNILSKASAKSRDPRLRFANSNVSALDLNQRPLHNASKVPPVSGIMDPR 289

Query: 2417 NCNIGEQSVLEGRSLKRQRN---GFTPSDI------------TEKTQPNEPSNNNLSGNM 2283
                 E+ VL+G + KRQ+N    F   D+            T+  +    + N     +
Sbjct: 290  KKKSTEEPVLDGPAPKRQKNELENFGVRDVQAVSGNGGWLEDTDNCESQITNRNQTMETL 349

Query: 2282 KSDLRKAEHGEK-QLAISAIHNVQSSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVHLV 2106
             S+ RK EHG      +S   N   ++ EQ    G SN  SLP L+KD+ VN T L++++
Sbjct: 350  DSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTGMSNP-SLPALLKDIAVNPTMLINIL 408

Query: 2105 K--KYHRLGTNSQQKSGDSAKKATSLFSSTAIPLFKKYFNPREKPIVK--PQITDETPTN 1938
            K  +  RL + SQQK+ D  K      SS  +       N    P V   P  +  T + 
Sbjct: 409  KMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVLGVIPPANVIPSPSVNVVPSSSSGTLSK 468

Query: 1937 PQGELS--------KIRLKDRDPRKNLHYGTFQQNKRSRFEQFEANGADPSVSQSG-KDS 1785
            P G L         KIR+K RDPR+ LH    Q++     +Q + NG  P+ S  G KD+
Sbjct: 469  PAGNLQGPPLDESCKIRMKPRDPRRVLHGNVLQKSGSVGPDQLKTNGTSPASSTQGSKDN 528

Query: 1784 FSLXXXXXXXXXXXXXXXXXXQLPDIASEFTKNLKNVADILSIDNTSV---TVAEPVLSQ 1614
             +                     PDIA +FT++LKN+A ++S   +      V++ ++SQ
Sbjct: 529  MNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQSLKNIAGMMSGPQSFAGLPAVSQNLVSQ 588

Query: 1613 QIPENMDRVEMGIIATDCDNRQNKNCLPPEEHTKEPSQSPNPWGEMEHIFEGYDELQKAT 1434
             I    +  +     ++ +++Q      PE     P  S N WG++EH+FE YD+ QKA 
Sbjct: 589  PIQVKSETADKNTKGSNSEDQQTGTGTAPEAGVTCPPPSQNAWGDVEHLFEKYDDRQKAA 648

Query: 1433 ILXXXXXXXXEQNKMFAAKKXXXXXXXXXXXLNSAKFIEIDPVHQELLRMKEEKERGKSQ 1254
            I         EQ KMFAA+K           LNSAKFIE+DPVH+E+LR KEE++R K Q
Sbjct: 649  IQRERARRIEEQKKMFAARKLCLVLDLDHTLLNSAKFIEVDPVHEEILRKKEEQDREKPQ 708

Query: 1253 RHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKRYATEMAKLLDPSGALFSGR 1074
            RHLFRF HMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK YATEMAK+LDP G LF+GR
Sbjct: 709  RHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGR 768

Query: 1073 VISRGDDGESLDGDER-PKIKDLDGVLGMESAVVIIDDSVRVWPHYKLNMIAVERYIYFP 897
            VISRGDDG+  DGDER P+ KDL+GVLGMES+VVIIDDSVRVWPH KLN+I VERY YFP
Sbjct: 769  VISRGDDGDPFDGDERVPRSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFP 828

Query: 896  CSRRQFGLLGPSLLEVGHDERSENGTLASSLAVIERIHRTFFSHQCLKNLDVRNILASEQ 717
            CSRRQFGLLGPSLLE+ HDER E+GTLASSLAVIERIH+ FFSHQ L +LDVRNILA+EQ
Sbjct: 829  CSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFSHQNLDDLDVRNILATEQ 888

Query: 716  KKILAGCCIVFSRVFPVGLANPKLHPLWQTAEQFGAVCTNQIDERVTHIVATSLGTDKVN 537
            +KIL+GC IVFSRVFPVG ANP LHPLWQTAEQFGAVCTNQIDE VTH+VA SLGTDKVN
Sbjct: 889  RKILSGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEHVTHVVANSLGTDKVN 948

Query: 536  WALSSRRFVVQPGWVEASAFLYRRADERAFAV 441
            WALS+ +FVV PGWVEASA LYRRA+E  FA+
Sbjct: 949  WALSTGKFVVHPGWVEASALLYRRANEHDFAI 980


>gb|KJB77192.1| hypothetical protein B456_012G125200 [Gossypium raimondii]
          Length = 1033

 Score =  696 bits (1795), Expect = 0.0
 Identities = 428/932 (45%), Positives = 545/932 (58%), Gaps = 68/932 (7%)
 Frame = -3

Query: 3032 ISVKPRVHIERNMGPEALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTRE------I 2871
            +SV   +H   N+  EAL+ G+ + +   G   PL+D H+ HD DSLPSPTRE      +
Sbjct: 102  LSVDSEIHNMPNILTEALKPGVPNFR-NKGLSLPLLDLHKDHDADSLPSPTRETTPCLPV 160

Query: 2870 LKPLSITKNQAQPNLPAISLADKSEDAIAQLCKSDALEVVSVYQPKFG--SNLLTDRLPN 2697
            L+PL+      +           +E       ++DAL+  S YQ KFG  S   +DRLP+
Sbjct: 161  LRPLTTGDGMVRSGFMMAKGLPDAERNKMHPYETDALKAFSSYQRKFGRGSFFSSDRLPS 220

Query: 2696 PIPSGELHDGNGDEEAQDLSDR----------------VSSVPYMVSSTKETLVVG---- 2577
            P PS E  D   D   +  S                  VSS P++ S++  + + G    
Sbjct: 221  PTPSEESGDEGCDTGGEVSSSSSIGNFKPNLPVMGHPIVSSAPHIDSASSTSSMQGQFTT 280

Query: 2576 -----ITGEMASDC-PVLSCPARSSSLGPAHLEVVTPAVNXXXXXXXXXQP-IGGMMNSK 2418
                 +T   AS+     S  +R   L  A+  V    +N          P + G+M+ +
Sbjct: 281  QNATPVTVSSASNILSKASAKSRDPRLRFANSNVSALDLNQRPLHNASKVPPVSGIMDPR 340

Query: 2417 NCNIGEQSVLEGRSLKRQRN---GFTPSDI------------TEKTQPNEPSNNNLSGNM 2283
                 E+ VL+G + KRQ+N    F   D+            T+  +    + N     +
Sbjct: 341  KKKSTEEPVLDGPAPKRQKNELENFGVRDVQAVSGNGGWLEDTDNCESQITNRNQTMETL 400

Query: 2282 KSDLRKAEHGEK-QLAISAIHNVQSSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVHLV 2106
             S+ RK EHG      +S   N   ++ EQ    G SN  SLP L+KD+ VN T L++++
Sbjct: 401  DSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTGMSNP-SLPALLKDIAVNPTMLINIL 459

Query: 2105 K--KYHRLGTNSQQKSGDSAKKATSLFSSTAIPLFKKYFNPREKPIVK--PQITDETPTN 1938
            K  +  RL + SQQK+ D  K      SS  +       N    P V   P  +  T + 
Sbjct: 460  KMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVLGVIPPANVIPSPSVNVVPSSSSGTLSK 519

Query: 1937 PQGELS--------KIRLKDRDPRKNLHYGTFQQNKRSRFEQFEANGADPSVSQSG-KDS 1785
            P G L         KIR+K RDPR+ LH    Q++     +Q + NG  P+ S  G KD+
Sbjct: 520  PAGNLQGPPLDESCKIRMKPRDPRRVLHGNVLQKSGSVGPDQLKTNGTSPASSTQGSKDN 579

Query: 1784 FSLXXXXXXXXXXXXXXXXXXQLPDIASEFTKNLKNVADILSIDNTSV---TVAEPVLSQ 1614
             +                     PDIA +FT++LKN+A ++S   +      V++ ++SQ
Sbjct: 580  MNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQSLKNIAGMMSGPQSFAGLPAVSQNLVSQ 639

Query: 1613 QIPENMDRVEMGIIATDCDNRQNKNCLPPEEHTKEPSQSPNPWGEMEHIFEGYDELQKAT 1434
             I    +  +     ++ +++Q      PE     P  S N WG++EH+FE YD+ QKA 
Sbjct: 640  PIQVKSETADKNTKGSNSEDQQTGTGTAPEAGVTCPPPSQNAWGDVEHLFEKYDDRQKAA 699

Query: 1433 ILXXXXXXXXEQNKMFAAKKXXXXXXXXXXXLNSAKFIEIDPVHQELLRMKEEKERGKSQ 1254
            I         EQ KMFAA+K           LNSAKFIE+DPVH+E+LR KEE++R K Q
Sbjct: 700  IQRERARRIEEQKKMFAARKLCLVLDLDHTLLNSAKFIEVDPVHEEILRKKEEQDREKPQ 759

Query: 1253 RHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKRYATEMAKLLDPSGALFSGR 1074
            RHLFRF HMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK YATEMAK+LDP G LF+GR
Sbjct: 760  RHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGR 819

Query: 1073 VISRGDDGESLDGDER-PKIKDLDGVLGMESAVVIIDDSVRVWPHYKLNMIAVERYIYFP 897
            VISRGDDG+  DGDER P+ KDL+GVLGMES+VVIIDDSVRVWPH KLN+I VERY YFP
Sbjct: 820  VISRGDDGDPFDGDERVPRSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFP 879

Query: 896  CSRRQFGLLGPSLLEVGHDERSENGTLASSLAVIERIHRTFFSHQCLKNLDVRNILASEQ 717
            CSRRQFGLLGPSLLE+ HDER E+GTLASSLAVIERIH+ FFSHQ L +LDVRNILA+EQ
Sbjct: 880  CSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFSHQNLDDLDVRNILATEQ 939

Query: 716  KKILAGCCIVFSRVFPVGLANPKLHPLWQTAEQFGAVCTNQIDERVTHIVATSLGTDKVN 537
            +KIL+GC IVFSRVFPVG ANP LHPLWQTAEQFGAVCTNQIDE VTH+VA SLGTDKVN
Sbjct: 940  RKILSGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEHVTHVVANSLGTDKVN 999

Query: 536  WALSSRRFVVQPGWVEASAFLYRRADERAFAV 441
            WALS+ +FVV PGWVEASA LYRRA+E  FA+
Sbjct: 1000 WALSTGKFVVHPGWVEASALLYRRANEHDFAI 1031


>ref|XP_012459417.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X1 [Gossypium raimondii]
            gi|763810289|gb|KJB77191.1| hypothetical protein
            B456_012G125200 [Gossypium raimondii]
          Length = 1272

 Score =  696 bits (1795), Expect = 0.0
 Identities = 428/932 (45%), Positives = 545/932 (58%), Gaps = 68/932 (7%)
 Frame = -3

Query: 3032 ISVKPRVHIERNMGPEALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTRE------I 2871
            +SV   +H   N+  EAL+ G+ + +   G   PL+D H+ HD DSLPSPTRE      +
Sbjct: 341  LSVDSEIHNMPNILTEALKPGVPNFR-NKGLSLPLLDLHKDHDADSLPSPTRETTPCLPV 399

Query: 2870 LKPLSITKNQAQPNLPAISLADKSEDAIAQLCKSDALEVVSVYQPKFG--SNLLTDRLPN 2697
            L+PL+      +           +E       ++DAL+  S YQ KFG  S   +DRLP+
Sbjct: 400  LRPLTTGDGMVRSGFMMAKGLPDAERNKMHPYETDALKAFSSYQRKFGRGSFFSSDRLPS 459

Query: 2696 PIPSGELHDGNGDEEAQDLSDR----------------VSSVPYMVSSTKETLVVG---- 2577
            P PS E  D   D   +  S                  VSS P++ S++  + + G    
Sbjct: 460  PTPSEESGDEGCDTGGEVSSSSSIGNFKPNLPVMGHPIVSSAPHIDSASSTSSMQGQFTT 519

Query: 2576 -----ITGEMASDC-PVLSCPARSSSLGPAHLEVVTPAVNXXXXXXXXXQP-IGGMMNSK 2418
                 +T   AS+     S  +R   L  A+  V    +N          P + G+M+ +
Sbjct: 520  QNATPVTVSSASNILSKASAKSRDPRLRFANSNVSALDLNQRPLHNASKVPPVSGIMDPR 579

Query: 2417 NCNIGEQSVLEGRSLKRQRN---GFTPSDI------------TEKTQPNEPSNNNLSGNM 2283
                 E+ VL+G + KRQ+N    F   D+            T+  +    + N     +
Sbjct: 580  KKKSTEEPVLDGPAPKRQKNELENFGVRDVQAVSGNGGWLEDTDNCESQITNRNQTMETL 639

Query: 2282 KSDLRKAEHGEK-QLAISAIHNVQSSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVHLV 2106
             S+ RK EHG      +S   N   ++ EQ    G SN  SLP L+KD+ VN T L++++
Sbjct: 640  DSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTGMSNP-SLPALLKDIAVNPTMLINIL 698

Query: 2105 K--KYHRLGTNSQQKSGDSAKKATSLFSSTAIPLFKKYFNPREKPIVK--PQITDETPTN 1938
            K  +  RL + SQQK+ D  K      SS  +       N    P V   P  +  T + 
Sbjct: 699  KMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVLGVIPPANVIPSPSVNVVPSSSSGTLSK 758

Query: 1937 PQGELS--------KIRLKDRDPRKNLHYGTFQQNKRSRFEQFEANGADPSVSQSG-KDS 1785
            P G L         KIR+K RDPR+ LH    Q++     +Q + NG  P+ S  G KD+
Sbjct: 759  PAGNLQGPPLDESCKIRMKPRDPRRVLHGNVLQKSGSVGPDQLKTNGTSPASSTQGSKDN 818

Query: 1784 FSLXXXXXXXXXXXXXXXXXXQLPDIASEFTKNLKNVADILSIDNTSV---TVAEPVLSQ 1614
             +                     PDIA +FT++LKN+A ++S   +      V++ ++SQ
Sbjct: 819  MNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQSLKNIAGMMSGPQSFAGLPAVSQNLVSQ 878

Query: 1613 QIPENMDRVEMGIIATDCDNRQNKNCLPPEEHTKEPSQSPNPWGEMEHIFEGYDELQKAT 1434
             I    +  +     ++ +++Q      PE     P  S N WG++EH+FE YD+ QKA 
Sbjct: 879  PIQVKSETADKNTKGSNSEDQQTGTGTAPEAGVTCPPPSQNAWGDVEHLFEKYDDRQKAA 938

Query: 1433 ILXXXXXXXXEQNKMFAAKKXXXXXXXXXXXLNSAKFIEIDPVHQELLRMKEEKERGKSQ 1254
            I         EQ KMFAA+K           LNSAKFIE+DPVH+E+LR KEE++R K Q
Sbjct: 939  IQRERARRIEEQKKMFAARKLCLVLDLDHTLLNSAKFIEVDPVHEEILRKKEEQDREKPQ 998

Query: 1253 RHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKRYATEMAKLLDPSGALFSGR 1074
            RHLFRF HMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK YATEMAK+LDP G LF+GR
Sbjct: 999  RHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGR 1058

Query: 1073 VISRGDDGESLDGDER-PKIKDLDGVLGMESAVVIIDDSVRVWPHYKLNMIAVERYIYFP 897
            VISRGDDG+  DGDER P+ KDL+GVLGMES+VVIIDDSVRVWPH KLN+I VERY YFP
Sbjct: 1059 VISRGDDGDPFDGDERVPRSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFP 1118

Query: 896  CSRRQFGLLGPSLLEVGHDERSENGTLASSLAVIERIHRTFFSHQCLKNLDVRNILASEQ 717
            CSRRQFGLLGPSLLE+ HDER E+GTLASSLAVIERIH+ FFSHQ L +LDVRNILA+EQ
Sbjct: 1119 CSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFSHQNLDDLDVRNILATEQ 1178

Query: 716  KKILAGCCIVFSRVFPVGLANPKLHPLWQTAEQFGAVCTNQIDERVTHIVATSLGTDKVN 537
            +KIL+GC IVFSRVFPVG ANP LHPLWQTAEQFGAVCTNQIDE VTH+VA SLGTDKVN
Sbjct: 1179 RKILSGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEHVTHVVANSLGTDKVN 1238

Query: 536  WALSSRRFVVQPGWVEASAFLYRRADERAFAV 441
            WALS+ +FVV PGWVEASA LYRRA+E  FA+
Sbjct: 1239 WALSTGKFVVHPGWVEASALLYRRANEHDFAI 1270


>ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X2 [Gossypium raimondii]
          Length = 1251

 Score =  690 bits (1781), Expect = 0.0
 Identities = 424/917 (46%), Positives = 538/917 (58%), Gaps = 68/917 (7%)
 Frame = -3

Query: 2987 EALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTRE------ILKPLSITKNQAQPNL 2826
            EAL+ G+ + +   G   PL+D H+ HD DSLPSPTRE      +L+PL+      +   
Sbjct: 335  EALKPGVPNFR-NKGLSLPLLDLHKDHDADSLPSPTRETTPCLPVLRPLTTGDGMVRSGF 393

Query: 2825 PAISLADKSEDAIAQLCKSDALEVVSVYQPKFG--SNLLTDRLPNPIPSGELHDGNGDEE 2652
                    +E       ++DAL+  S YQ KFG  S   +DRLP+P PS E  D   D  
Sbjct: 394  MMAKGLPDAERNKMHPYETDALKAFSSYQRKFGRGSFFSSDRLPSPTPSEESGDEGCDTG 453

Query: 2651 AQDLSDR----------------VSSVPYMVSSTKETLVVG---------ITGEMASDC- 2550
             +  S                  VSS P++ S++  + + G         +T   AS+  
Sbjct: 454  GEVSSSSSIGNFKPNLPVMGHPIVSSAPHIDSASSTSSMQGQFTTQNATPVTVSSASNIL 513

Query: 2549 PVLSCPARSSSLGPAHLEVVTPAVNXXXXXXXXXQP-IGGMMNSKNCNIGEQSVLEGRSL 2373
               S  +R   L  A+  V    +N          P + G+M+ +     E+ VL+G + 
Sbjct: 514  SKASAKSRDPRLRFANSNVSALDLNQRPLHNASKVPPVSGIMDPRKKKSTEEPVLDGPAP 573

Query: 2372 KRQRN---GFTPSDI------------TEKTQPNEPSNNNLSGNMKSDLRKAEHGEK-QL 2241
            KRQ+N    F   D+            T+  +    + N     + S+ RK EHG     
Sbjct: 574  KRQKNELENFGVRDVQAVSGNGGWLEDTDNCESQITNRNQTMETLDSNSRKMEHGVTCSS 633

Query: 2240 AISAIHNVQSSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVHLVK--KYHRLGTNSQQK 2067
             +S   N   ++ EQ    G SN  SLP L+KD+ VN T L++++K  +  RL + SQQK
Sbjct: 634  TLSGKTNTTVNKNEQVPLTGMSNP-SLPALLKDIAVNPTMLINILKMGQQQRLPSESQQK 692

Query: 2066 SGDSAKKATSLFSSTAIPLFKKYFNPREKPIVK--PQITDETPTNPQGELS--------K 1917
            + D  K      SS  +       N    P V   P  +  T + P G L         K
Sbjct: 693  TPDPLKNTLYQPSSNPVLGVIPPANVIPSPSVNVVPSSSSGTLSKPAGNLQGPPLDESCK 752

Query: 1916 IRLKDRDPRKNLHYGTFQQNKRSRFEQFEANGADPSVSQSG-KDSFSLXXXXXXXXXXXX 1740
            IR+K RDPR+ LH    Q++     +Q + NG  P+ S  G KD+ +             
Sbjct: 753  IRMKPRDPRRVLHGNVLQKSGSVGPDQLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKP 812

Query: 1739 XXXXXXQLPDIASEFTKNLKNVADILSIDNTSV---TVAEPVLSQQIPENMDRVEMGIIA 1569
                    PDIA +FT++LKN+A ++S   +      V++ ++SQ I    +  +     
Sbjct: 813  IQCQFVPPPDIAQQFTQSLKNIAGMMSGPQSFAGLPAVSQNLVSQPIQVKSETADKNTKG 872

Query: 1568 TDCDNRQNKNCLPPEEHTKEPSQSPNPWGEMEHIFEGYDELQKATILXXXXXXXXEQNKM 1389
            ++ +++Q      PE     P  S N WG++EH+FE YD+ QKA I         EQ KM
Sbjct: 873  SNSEDQQTGTGTAPEAGVTCPPPSQNAWGDVEHLFEKYDDRQKAAIQRERARRIEEQKKM 932

Query: 1388 FAAKKXXXXXXXXXXXLNSAKFIEIDPVHQELLRMKEEKERGKSQRHLFRFPHMGMWTKL 1209
            FAA+K           LNSAKFIE+DPVH+E+LR KEE++R K QRHLFRF HMGMWTKL
Sbjct: 933  FAARKLCLVLDLDHTLLNSAKFIEVDPVHEEILRKKEEQDREKPQRHLFRFHHMGMWTKL 992

Query: 1208 RPGVWNFLEKASKLYELHLYTMGNKRYATEMAKLLDPSGALFSGRVISRGDDGESLDGDE 1029
            RPG+WNFLEKASKLYELHLYTMGNK YATEMAK+LDP G LF+GRVISRGDDG+  DGDE
Sbjct: 993  RPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDE 1052

Query: 1028 R-PKIKDLDGVLGMESAVVIIDDSVRVWPHYKLNMIAVERYIYFPCSRRQFGLLGPSLLE 852
            R P+ KDL+GVLGMES+VVIIDDSVRVWPH KLN+I VERY YFPCSRRQFGLLGPSLLE
Sbjct: 1053 RVPRSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLE 1112

Query: 851  VGHDERSENGTLASSLAVIERIHRTFFSHQCLKNLDVRNILASEQKKILAGCCIVFSRVF 672
            + HDER E+GTLASSLAVIERIH+ FFSHQ L +LDVRNILA+EQ+KIL+GC IVFSRVF
Sbjct: 1113 IDHDERPEDGTLASSLAVIERIHQNFFSHQNLDDLDVRNILATEQRKILSGCRIVFSRVF 1172

Query: 671  PVGLANPKLHPLWQTAEQFGAVCTNQIDERVTHIVATSLGTDKVNWALSSRRFVVQPGWV 492
            PVG ANP LHPLWQTAEQFGAVCTNQIDE VTH+VA SLGTDKVNWALS+ +FVV PGWV
Sbjct: 1173 PVGEANPHLHPLWQTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWV 1232

Query: 491  EASAFLYRRADERAFAV 441
            EASA LYRRA+E  FA+
Sbjct: 1233 EASALLYRRANEHDFAI 1249


>gb|KDO83172.1| hypothetical protein CISIN_1g000897mg [Citrus sinensis]
            gi|641864487|gb|KDO83173.1| hypothetical protein
            CISIN_1g000897mg [Citrus sinensis]
          Length = 960

 Score =  689 bits (1777), Expect = 0.0
 Identities = 415/899 (46%), Positives = 530/899 (58%), Gaps = 68/899 (7%)
 Frame = -3

Query: 2933 PLVDFHRHHDMDSLPSPTRE------ILKPLSITKNQAQPNLPAISLADKSEDAIAQLCK 2772
            PL+D H+ HD+DSLPSPTRE      + + L +     +    A  L+  +E       +
Sbjct: 78   PLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGMVKSWAAAAKLSHNAEVHKTPHYE 137

Query: 2771 SDALEVVSVYQPKFGSN--LLTDRLPNPIPSGELHDGNGDEEAQDLS------------- 2637
            +DAL   S YQ KFG N   +   LP+P PS E  DG+GD   +  S             
Sbjct: 138  TDALRAFSSYQQKFGRNSFFMNSELPSPTPSEESGDGDGDTGGEISSATAVDQPKPVNMP 197

Query: 2636 ----DRVSSVPYMVS-----STKETLVVGITGEMASDC--------PVLSCPARSSSLGP 2508
                  VSS P  +S     S+ + L        AS          PV+  P +S    P
Sbjct: 198  TLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPVVKPNPVVKAPIKSRD--P 255

Query: 2507 AHLEVVTPAVNXXXXXXXXXQ------PIGGMMNSKNCNIGEQSVLEGRSLKRQRNGFTP 2346
                  + A+N                P+G +M+S+     E+ VL+G +LKRQRNGF  
Sbjct: 256  RLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVLDGPALKRQRNGFEN 315

Query: 2345 SDI----------------TEKTQPNEPSNNNLSGNMKSDLRKAEHGEKQLAISAIHNVQ 2214
            S +                T+  +P   + N L  + +S+ RK ++G      S   NV 
Sbjct: 316  SGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLVDSAESNSRKLDNGATSPITSGTPNVV 375

Query: 2213 SSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVHLVK--KYHRLGTNSQQKSGDSAKKAT 2040
             S  E   +   S  VSLP L+KD+ VN T L++++K  +  +L  ++QQKS DS+    
Sbjct: 376  VSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNILKMGQQQKLAADAQQKSNDSSMNTM 435

Query: 2039 SLFSSTAIPLFKKYFNPREKPI-VKPQITDETPTNPQGELSKIRLKDRDPRKNLHYGTFQ 1863
                 ++IP           P+ V   I     + P  EL K+R+K RDPR+ LH G   
Sbjct: 436  HPPIPSSIP-----------PVSVTCSIPSGILSKPMDELGKVRMKPRDPRRVLH-GNAL 483

Query: 1862 QNKRSRFEQFEANGADPSVSQSGKDSFSLXXXXXXXXXXXXXXXXXXQLPDIASEFTKNL 1683
            Q   S   +F+ +G     +Q  K++ +                   Q PDI  +FTKNL
Sbjct: 484  QRSGSLGPEFKTDGPSAPCTQGSKENLNFQKQLGAPEAKPVLSQSVLQ-PDITQQFTKNL 542

Query: 1682 KNVADILSIDNTSVTVAEPVLSQQIPENMDRVEMGI----IATDCDNRQNKNCLPPEEHT 1515
            K++AD +S+       +EP++SQ  P    +++ G     + T+ D++Q      PE   
Sbjct: 543  KHIADFMSVSQP--LTSEPMVSQNSPIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGP 600

Query: 1514 KEPSQSPNPWGEMEHIFEGYDELQKATILXXXXXXXXEQNKMFAAKKXXXXXXXXXXXLN 1335
               +   + WG++EH+FEGYD+ QKA I         EQ KMF+A+K           LN
Sbjct: 601  VG-AHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLN 659

Query: 1334 SAKFIEIDPVHQELLRMKEEKERGKSQRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELH 1155
            SAKF E+DPVH E+LR KEE++R K  RHLFRFPHMGMWTKLRPG+W FLE+ASKL+E+H
Sbjct: 660  SAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMH 719

Query: 1154 LYTMGNKRYATEMAKLLDPSGALFSGRVISRGDDGESLDGDER-PKIKDLDGVLGMESAV 978
            LYTMGNK YATEMAK+LDP G LF+GRVISRGDDG+  DGDER PK KDL+GVLGMESAV
Sbjct: 720  LYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAV 779

Query: 977  VIIDDSVRVWPHYKLNMIAVERYIYFPCSRRQFGLLGPSLLEVGHDERSENGTLASSLAV 798
            VIIDDSVRVWPH KLN+I VERY YFPCSRRQFGLLGPSLLE+ HDERSE+GTLASSL V
Sbjct: 780  VIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGV 839

Query: 797  IERIHRTFFSHQCLKNLDVRNILASEQKKILAGCCIVFSRVFPVGLANPKLHPLWQTAEQ 618
            IER+H+ FFSHQ L ++DVRNILA+EQ+KILAGC IVFSRVFPVG ANP LHPLWQTAEQ
Sbjct: 840  IERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQ 899

Query: 617  FGAVCTNQIDERVTHIVATSLGTDKVNWALSSRRFVVQPGWVEASAFLYRRADERAFAV 441
            FGAVCT  ID++VTH+VA SLGTDKVNWALS+ RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 900  FGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 958


>gb|KDO83171.1| hypothetical protein CISIN_1g000897mg [Citrus sinensis]
          Length = 995

 Score =  689 bits (1777), Expect = 0.0
 Identities = 415/899 (46%), Positives = 530/899 (58%), Gaps = 68/899 (7%)
 Frame = -3

Query: 2933 PLVDFHRHHDMDSLPSPTRE------ILKPLSITKNQAQPNLPAISLADKSEDAIAQLCK 2772
            PL+D H+ HD+DSLPSPTRE      + + L +     +    A  L+  +E       +
Sbjct: 113  PLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGMVKSWAAAAKLSHNAEVHKTPHYE 172

Query: 2771 SDALEVVSVYQPKFGSN--LLTDRLPNPIPSGELHDGNGDEEAQDLS------------- 2637
            +DAL   S YQ KFG N   +   LP+P PS E  DG+GD   +  S             
Sbjct: 173  TDALRAFSSYQQKFGRNSFFMNSELPSPTPSEESGDGDGDTGGEISSATAVDQPKPVNMP 232

Query: 2636 ----DRVSSVPYMVS-----STKETLVVGITGEMASDC--------PVLSCPARSSSLGP 2508
                  VSS P  +S     S+ + L        AS          PV+  P +S    P
Sbjct: 233  TLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPVVKPNPVVKAPIKSRD--P 290

Query: 2507 AHLEVVTPAVNXXXXXXXXXQ------PIGGMMNSKNCNIGEQSVLEGRSLKRQRNGFTP 2346
                  + A+N                P+G +M+S+     E+ VL+G +LKRQRNGF  
Sbjct: 291  RLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVLDGPALKRQRNGFEN 350

Query: 2345 SDI----------------TEKTQPNEPSNNNLSGNMKSDLRKAEHGEKQLAISAIHNVQ 2214
            S +                T+  +P   + N L  + +S+ RK ++G      S   NV 
Sbjct: 351  SGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLVDSAESNSRKLDNGATSPITSGTPNVV 410

Query: 2213 SSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVHLVK--KYHRLGTNSQQKSGDSAKKAT 2040
             S  E   +   S  VSLP L+KD+ VN T L++++K  +  +L  ++QQKS DS+    
Sbjct: 411  VSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNILKMGQQQKLAADAQQKSNDSSMNTM 470

Query: 2039 SLFSSTAIPLFKKYFNPREKPI-VKPQITDETPTNPQGELSKIRLKDRDPRKNLHYGTFQ 1863
                 ++IP           P+ V   I     + P  EL K+R+K RDPR+ LH G   
Sbjct: 471  HPPIPSSIP-----------PVSVTCSIPSGILSKPMDELGKVRMKPRDPRRVLH-GNAL 518

Query: 1862 QNKRSRFEQFEANGADPSVSQSGKDSFSLXXXXXXXXXXXXXXXXXXQLPDIASEFTKNL 1683
            Q   S   +F+ +G     +Q  K++ +                   Q PDI  +FTKNL
Sbjct: 519  QRSGSLGPEFKTDGPSAPCTQGSKENLNFQKQLGAPEAKPVLSQSVLQ-PDITQQFTKNL 577

Query: 1682 KNVADILSIDNTSVTVAEPVLSQQIPENMDRVEMGI----IATDCDNRQNKNCLPPEEHT 1515
            K++AD +S+       +EP++SQ  P    +++ G     + T+ D++Q      PE   
Sbjct: 578  KHIADFMSVSQP--LTSEPMVSQNSPIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGP 635

Query: 1514 KEPSQSPNPWGEMEHIFEGYDELQKATILXXXXXXXXEQNKMFAAKKXXXXXXXXXXXLN 1335
               +   + WG++EH+FEGYD+ QKA I         EQ KMF+A+K           LN
Sbjct: 636  VG-AHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLN 694

Query: 1334 SAKFIEIDPVHQELLRMKEEKERGKSQRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELH 1155
            SAKF E+DPVH E+LR KEE++R K  RHLFRFPHMGMWTKLRPG+W FLE+ASKL+E+H
Sbjct: 695  SAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMH 754

Query: 1154 LYTMGNKRYATEMAKLLDPSGALFSGRVISRGDDGESLDGDER-PKIKDLDGVLGMESAV 978
            LYTMGNK YATEMAK+LDP G LF+GRVISRGDDG+  DGDER PK KDL+GVLGMESAV
Sbjct: 755  LYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAV 814

Query: 977  VIIDDSVRVWPHYKLNMIAVERYIYFPCSRRQFGLLGPSLLEVGHDERSENGTLASSLAV 798
            VIIDDSVRVWPH KLN+I VERY YFPCSRRQFGLLGPSLLE+ HDERSE+GTLASSL V
Sbjct: 815  VIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGV 874

Query: 797  IERIHRTFFSHQCLKNLDVRNILASEQKKILAGCCIVFSRVFPVGLANPKLHPLWQTAEQ 618
            IER+H+ FFSHQ L ++DVRNILA+EQ+KILAGC IVFSRVFPVG ANP LHPLWQTAEQ
Sbjct: 875  IERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQ 934

Query: 617  FGAVCTNQIDERVTHIVATSLGTDKVNWALSSRRFVVQPGWVEASAFLYRRADERAFAV 441
            FGAVCT  ID++VTH+VA SLGTDKVNWALS+ RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 935  FGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 993


>gb|KDO83165.1| hypothetical protein CISIN_1g000897mg [Citrus sinensis]
          Length = 1234

 Score =  689 bits (1777), Expect = 0.0
 Identities = 415/899 (46%), Positives = 530/899 (58%), Gaps = 68/899 (7%)
 Frame = -3

Query: 2933 PLVDFHRHHDMDSLPSPTRE------ILKPLSITKNQAQPNLPAISLADKSEDAIAQLCK 2772
            PL+D H+ HD+DSLPSPTRE      + + L +     +    A  L+  +E       +
Sbjct: 352  PLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGMVKSWAAAAKLSHNAEVHKTPHYE 411

Query: 2771 SDALEVVSVYQPKFGSN--LLTDRLPNPIPSGELHDGNGDEEAQDLS------------- 2637
            +DAL   S YQ KFG N   +   LP+P PS E  DG+GD   +  S             
Sbjct: 412  TDALRAFSSYQQKFGRNSFFMNSELPSPTPSEESGDGDGDTGGEISSATAVDQPKPVNMP 471

Query: 2636 ----DRVSSVPYMVS-----STKETLVVGITGEMASDC--------PVLSCPARSSSLGP 2508
                  VSS P  +S     S+ + L        AS          PV+  P +S    P
Sbjct: 472  TLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPVVKPNPVVKAPIKSRD--P 529

Query: 2507 AHLEVVTPAVNXXXXXXXXXQ------PIGGMMNSKNCNIGEQSVLEGRSLKRQRNGFTP 2346
                  + A+N                P+G +M+S+     E+ VL+G +LKRQRNGF  
Sbjct: 530  RLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVLDGPALKRQRNGFEN 589

Query: 2345 SDI----------------TEKTQPNEPSNNNLSGNMKSDLRKAEHGEKQLAISAIHNVQ 2214
            S +                T+  +P   + N L  + +S+ RK ++G      S   NV 
Sbjct: 590  SGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLVDSAESNSRKLDNGATSPITSGTPNVV 649

Query: 2213 SSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVHLVK--KYHRLGTNSQQKSGDSAKKAT 2040
             S  E   +   S  VSLP L+KD+ VN T L++++K  +  +L  ++QQKS DS+    
Sbjct: 650  VSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNILKMGQQQKLAADAQQKSNDSSMNTM 709

Query: 2039 SLFSSTAIPLFKKYFNPREKPI-VKPQITDETPTNPQGELSKIRLKDRDPRKNLHYGTFQ 1863
                 ++IP           P+ V   I     + P  EL K+R+K RDPR+ LH G   
Sbjct: 710  HPPIPSSIP-----------PVSVTCSIPSGILSKPMDELGKVRMKPRDPRRVLH-GNAL 757

Query: 1862 QNKRSRFEQFEANGADPSVSQSGKDSFSLXXXXXXXXXXXXXXXXXXQLPDIASEFTKNL 1683
            Q   S   +F+ +G     +Q  K++ +                   Q PDI  +FTKNL
Sbjct: 758  QRSGSLGPEFKTDGPSAPCTQGSKENLNFQKQLGAPEAKPVLSQSVLQ-PDITQQFTKNL 816

Query: 1682 KNVADILSIDNTSVTVAEPVLSQQIPENMDRVEMGI----IATDCDNRQNKNCLPPEEHT 1515
            K++AD +S+       +EP++SQ  P    +++ G     + T+ D++Q      PE   
Sbjct: 817  KHIADFMSVSQP--LTSEPMVSQNSPIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGP 874

Query: 1514 KEPSQSPNPWGEMEHIFEGYDELQKATILXXXXXXXXEQNKMFAAKKXXXXXXXXXXXLN 1335
               +   + WG++EH+FEGYD+ QKA I         EQ KMF+A+K           LN
Sbjct: 875  VG-AHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLN 933

Query: 1334 SAKFIEIDPVHQELLRMKEEKERGKSQRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELH 1155
            SAKF E+DPVH E+LR KEE++R K  RHLFRFPHMGMWTKLRPG+W FLE+ASKL+E+H
Sbjct: 934  SAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMH 993

Query: 1154 LYTMGNKRYATEMAKLLDPSGALFSGRVISRGDDGESLDGDER-PKIKDLDGVLGMESAV 978
            LYTMGNK YATEMAK+LDP G LF+GRVISRGDDG+  DGDER PK KDL+GVLGMESAV
Sbjct: 994  LYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAV 1053

Query: 977  VIIDDSVRVWPHYKLNMIAVERYIYFPCSRRQFGLLGPSLLEVGHDERSENGTLASSLAV 798
            VIIDDSVRVWPH KLN+I VERY YFPCSRRQFGLLGPSLLE+ HDERSE+GTLASSL V
Sbjct: 1054 VIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGV 1113

Query: 797  IERIHRTFFSHQCLKNLDVRNILASEQKKILAGCCIVFSRVFPVGLANPKLHPLWQTAEQ 618
            IER+H+ FFSHQ L ++DVRNILA+EQ+KILAGC IVFSRVFPVG ANP LHPLWQTAEQ
Sbjct: 1114 IERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQ 1173

Query: 617  FGAVCTNQIDERVTHIVATSLGTDKVNWALSSRRFVVQPGWVEASAFLYRRADERAFAV 441
            FGAVCT  ID++VTH+VA SLGTDKVNWALS+ RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 1174 FGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 1232


>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 3-like
            [Citrus sinensis] gi|557541056|gb|ESR52100.1|
            hypothetical protein CICLE_v10030535mg [Citrus
            clementina]
          Length = 1234

 Score =  688 bits (1775), Expect = 0.0
 Identities = 415/899 (46%), Positives = 530/899 (58%), Gaps = 68/899 (7%)
 Frame = -3

Query: 2933 PLVDFHRHHDMDSLPSPTRE------ILKPLSITKNQAQPNLPAISLADKSEDAIAQLCK 2772
            PL+D H+ HD+DSLPSPTRE      + + L +     +    A  L+  +E       +
Sbjct: 352  PLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGVVKSWAAAAKLSHNAEVHKTPHYE 411

Query: 2771 SDALEVVSVYQPKFGSN--LLTDRLPNPIPSGELHDGNGDEEAQDLS------------- 2637
            +DAL   S YQ KFG N   +   LP+P PS E  DG+GD   +  S             
Sbjct: 412  TDALRAFSSYQQKFGRNSFFMNSELPSPTPSEESGDGDGDTGGEISSATAVDQPKPVNMP 471

Query: 2636 ----DRVSSVPYMVS-----STKETLVVGITGEMASDC--------PVLSCPARSSSLGP 2508
                  VSS P  +S     S+ + L        AS          PV+  P +S    P
Sbjct: 472  TLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPVVKPNPVVKAPIKSRD--P 529

Query: 2507 AHLEVVTPAVNXXXXXXXXXQ------PIGGMMNSKNCNIGEQSVLEGRSLKRQRNGFTP 2346
                  + A+N                P+G +M+S+     E+ VL+G +LKRQRNGF  
Sbjct: 530  RLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVLDGPALKRQRNGFEN 589

Query: 2345 SDI----------------TEKTQPNEPSNNNLSGNMKSDLRKAEHGEKQLAISAIHNVQ 2214
            S +                T+  +P   + N L  + +S+ RK ++G      S   NV 
Sbjct: 590  SGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLVDSAESNSRKLDNGATSPITSGTPNVV 649

Query: 2213 SSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVHLVK--KYHRLGTNSQQKSGDSAKKAT 2040
             S  E   +   S  VSLP L+KD+ VN T L++++K  +  +L  ++QQKS DS+    
Sbjct: 650  VSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNILKMGQQQKLAADAQQKSNDSSMNTM 709

Query: 2039 SLFSSTAIPLFKKYFNPREKPI-VKPQITDETPTNPQGELSKIRLKDRDPRKNLHYGTFQ 1863
                 ++IP           P+ V   I     + P  EL K+R+K RDPR+ LH G   
Sbjct: 710  HPPIPSSIP-----------PVSVTCSIPSGILSKPMDELGKVRMKPRDPRRVLH-GNAL 757

Query: 1862 QNKRSRFEQFEANGADPSVSQSGKDSFSLXXXXXXXXXXXXXXXXXXQLPDIASEFTKNL 1683
            Q   S   +F+ +G     +Q  K++ +                   Q PDI  +FTKNL
Sbjct: 758  QRSGSLGPEFKTDGPSAPCTQGSKENLNFQKQLGAPEAKPVLSQSVLQ-PDITQQFTKNL 816

Query: 1682 KNVADILSIDNTSVTVAEPVLSQQIPENMDRVEMGI----IATDCDNRQNKNCLPPEEHT 1515
            K++AD +S+       +EP++SQ  P    +++ G     + T+ D++Q      PE   
Sbjct: 817  KHIADFMSVSQP--LTSEPMVSQNSPIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGP 874

Query: 1514 KEPSQSPNPWGEMEHIFEGYDELQKATILXXXXXXXXEQNKMFAAKKXXXXXXXXXXXLN 1335
               +   + WG++EH+FEGYD+ QKA I         EQ KMF+A+K           LN
Sbjct: 875  VG-AHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLN 933

Query: 1334 SAKFIEIDPVHQELLRMKEEKERGKSQRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELH 1155
            SAKF E+DPVH E+LR KEE++R K  RHLFRFPHMGMWTKLRPG+W FLE+ASKL+E+H
Sbjct: 934  SAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMH 993

Query: 1154 LYTMGNKRYATEMAKLLDPSGALFSGRVISRGDDGESLDGDER-PKIKDLDGVLGMESAV 978
            LYTMGNK YATEMAK+LDP G LF+GRVISRGDDG+  DGDER PK KDL+GVLGMESAV
Sbjct: 994  LYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAV 1053

Query: 977  VIIDDSVRVWPHYKLNMIAVERYIYFPCSRRQFGLLGPSLLEVGHDERSENGTLASSLAV 798
            VIIDDSVRVWPH KLN+I VERY YFPCSRRQFGLLGPSLLE+ HDERSE+GTLASSL V
Sbjct: 1054 VIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGV 1113

Query: 797  IERIHRTFFSHQCLKNLDVRNILASEQKKILAGCCIVFSRVFPVGLANPKLHPLWQTAEQ 618
            IER+H+ FFSHQ L ++DVRNILA+EQ+KILAGC IVFSRVFPVG ANP LHPLWQTAEQ
Sbjct: 1114 IERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQ 1173

Query: 617  FGAVCTNQIDERVTHIVATSLGTDKVNWALSSRRFVVQPGWVEASAFLYRRADERAFAV 441
            FGAVCT  ID++VTH+VA SLGTDKVNWALS+ RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 1174 FGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 1232


>gb|KDO83166.1| hypothetical protein CISIN_1g000897mg [Citrus sinensis]
          Length = 1218

 Score =  684 bits (1764), Expect = 0.0
 Identities = 413/898 (45%), Positives = 525/898 (58%), Gaps = 67/898 (7%)
 Frame = -3

Query: 2933 PLVDFHRHHDMDSLPSPTRE------ILKPLSITKNQAQPNLPAISLADKSEDAIAQLCK 2772
            PL+D H+ HD+DSLPSPTRE      + + L +     +    A  L+  +E       +
Sbjct: 352  PLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGMVKSWAAAAKLSHNAEVHKTPHYE 411

Query: 2771 SDALEVVSVYQPKFGSN--LLTDRLPNPIPSGELHDGNGDEEAQDLS------------- 2637
            +DAL   S YQ KFG N   +   LP+P PS E  DG+GD   +  S             
Sbjct: 412  TDALRAFSSYQQKFGRNSFFMNSELPSPTPSEESGDGDGDTGGEISSATAVDQPKPVNMP 471

Query: 2636 ----DRVSSVPYMVS-----STKETLVVGITGEMASDC--------PVLSCPARSSSLGP 2508
                  VSS P  +S     S+ + L        AS          PV+  P +S    P
Sbjct: 472  TLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPVVKPNPVVKAPIKSRD--P 529

Query: 2507 AHLEVVTPAVNXXXXXXXXXQ------PIGGMMNSKNCNIGEQSVLEGRSLKRQRNGFTP 2346
                  + A+N                P+G +M+S+     E+ VL+G +LKRQRNGF  
Sbjct: 530  RLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVLDGPALKRQRNGFEN 589

Query: 2345 SDI----------------TEKTQPNEPSNNNLSGNMKSDLRKAEHGEKQLAISAIHNVQ 2214
            S +                T+  +P   + N L  + +S+ RK ++G      S   NV 
Sbjct: 590  SGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLVDSAESNSRKLDNGATSPITSGTPNVV 649

Query: 2213 SSEREQFASLGTSNAVSLPDLIKDVGVNSTTLVHLVK--KYHRLGTNSQQKSGDSAKKAT 2040
             S  E   +   S  VSLP L+KD+ VN T L++++K  +  +L  ++QQKS DS+    
Sbjct: 650  VSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNILKMGQQQKLAADAQQKSNDSS---- 705

Query: 2039 SLFSSTAIPLFKKYFNPREKPIVKPQITDETPTNPQGELSKIRLKDRDPRKNLHYGTFQQ 1860
                           N    PI          + P  EL K+R+K RDPR+ LH G   Q
Sbjct: 706  --------------MNTMHPPIPS--------SIPPDELGKVRMKPRDPRRVLH-GNALQ 742

Query: 1859 NKRSRFEQFEANGADPSVSQSGKDSFSLXXXXXXXXXXXXXXXXXXQLPDIASEFTKNLK 1680
               S   +F+ +G     +Q  K++ +                   Q PDI  +FTKNLK
Sbjct: 743  RSGSLGPEFKTDGPSAPCTQGSKENLNFQKQLGAPEAKPVLSQSVLQ-PDITQQFTKNLK 801

Query: 1679 NVADILSIDNTSVTVAEPVLSQQIPENMDRVEMGI----IATDCDNRQNKNCLPPEEHTK 1512
            ++AD +S+       +EP++SQ  P    +++ G     + T+ D++Q      PE    
Sbjct: 802  HIADFMSVSQP--LTSEPMVSQNSPIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGPV 859

Query: 1511 EPSQSPNPWGEMEHIFEGYDELQKATILXXXXXXXXEQNKMFAAKKXXXXXXXXXXXLNS 1332
              +   + WG++EH+FEGYD+ QKA I         EQ KMF+A+K           LNS
Sbjct: 860  G-AHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLNS 918

Query: 1331 AKFIEIDPVHQELLRMKEEKERGKSQRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHL 1152
            AKF E+DPVH E+LR KEE++R K  RHLFRFPHMGMWTKLRPG+W FLE+ASKL+E+HL
Sbjct: 919  AKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHL 978

Query: 1151 YTMGNKRYATEMAKLLDPSGALFSGRVISRGDDGESLDGDER-PKIKDLDGVLGMESAVV 975
            YTMGNK YATEMAK+LDP G LF+GRVISRGDDG+  DGDER PK KDL+GVLGMESAVV
Sbjct: 979  YTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVV 1038

Query: 974  IIDDSVRVWPHYKLNMIAVERYIYFPCSRRQFGLLGPSLLEVGHDERSENGTLASSLAVI 795
            IIDDSVRVWPH KLN+I VERY YFPCSRRQFGLLGPSLLE+ HDERSE+GTLASSL VI
Sbjct: 1039 IIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVI 1098

Query: 794  ERIHRTFFSHQCLKNLDVRNILASEQKKILAGCCIVFSRVFPVGLANPKLHPLWQTAEQF 615
            ER+H+ FFSHQ L ++DVRNILA+EQ+KILAGC IVFSRVFPVG ANP LHPLWQTAEQF
Sbjct: 1099 ERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQF 1158

Query: 614  GAVCTNQIDERVTHIVATSLGTDKVNWALSSRRFVVQPGWVEASAFLYRRADERAFAV 441
            GAVCT  ID++VTH+VA SLGTDKVNWALS+ RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 1159 GAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 1216


>ref|XP_011020855.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Populus euphratica]
          Length = 1271

 Score =  681 bits (1758), Expect = 0.0
 Identities = 429/950 (45%), Positives = 543/950 (57%), Gaps = 92/950 (9%)
 Frame = -3

Query: 3014 VHIERNMGPEALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTRE------ILKPLSI 2853
            VH + N   E  + G+ S +   G   PL+D  + HD DSLPSPTRE      + + L I
Sbjct: 340  VHNKPNFSIEPPKPGVPSFR-SRGVLLPLLDLKKFHDEDSLPSPTRETAPSFPVQRLLPI 398

Query: 2852 TKNQAQPNLPAISLADKSEDAIAQLCKSDALEVVSVYQPKFGSN-LLTDRLPNPIPSGEL 2676
                    LP   +A  +E+      ++DAL+ VS YQ KF  N   T+ LP+P PS E 
Sbjct: 399  GDGMISSGLPVPKVASITEEPRVHPYETDALKAVSSYQQKFNRNSFFTNELPSPTPSEES 458

Query: 2675 HDGNGD---EEAQDLSDRVSSVPYMVSSTKETL----------------------VVGIT 2571
             +G+GD   E +  L+    +V   VS  K                         VV  T
Sbjct: 459  GNGDGDIAGEVSSSLTANYRTVNPPVSERKSASPSPPPPPPPPPPPPHLNNSCIRVVIPT 518

Query: 2570 GEMASDCPVLSCPARSSSLG-PAHLEVVTPAVNXXXXXXXXXQ---------PIGGMMNS 2421
             + A      S  A++S+      L  V   V+                   P G +  S
Sbjct: 519  RDSAPVSSGTSSTAKASAKSRDPRLRYVNTDVSALDQNQRTLLMVNNPPRAEPSGAIAGS 578

Query: 2420 KNCNIGEQSVLEGRSLKRQRNGF------------------------------TPSDITE 2331
            +   I E+ VL+G SLKRQRN F                                +   E
Sbjct: 579  RKQKI-EEDVLDGTSLKRQRNSFDNFGGVRDIRSMTGTGGWLEDTDMAEPQTVNKNQRAE 637

Query: 2330 KTQPNEPSNNNL----SGNMKSDLRKAEHGEKQLAISAIHNVQSSEREQFASLGTSNAVS 2163
              +P +  NN +    +G++ S++  +  G  Q+ +  I+ V  SE+   A + ++   S
Sbjct: 638  NAEPGQRINNGVVRPSTGSVMSNVNCS--GNVQVPVMGINTVAGSEQ---APVTSTTTAS 692

Query: 2162 LPDLIKDVGVNSTTLVHLVK--KYHRLGTNSQQKSGDSAKKATSLFSSTAIPLFKKYFN- 1992
            LPDL+KD+ VN T L++++K  +  RL  + QQK  D AK  +   SS+++P      N 
Sbjct: 693  LPDLLKDITVNPTLLINILKMGQQQRLALDGQQKLADPAKSTSHPPSSSSVPGATPEVNA 752

Query: 1991 ---------PREKPIVKPQITDETPTNPQGELSKIRLKDRDPRKNLHYGTFQQNKRSRFE 1839
                     PR     K Q+  +  T    E  KIR+K RDPR+ LH    Q+      E
Sbjct: 753  VSSQPSGILPRSAG--KAQVPSQVATT--DESGKIRMKPRDPRRVLHNNALQRAGSLGSE 808

Query: 1838 QFEANGADPSVSQSGKDSFSLXXXXXXXXXXXXXXXXXXQLPDIASEFTKNLKNVADILS 1659
            QF+      S +Q  KD+ +L                    PDI+S FTK+L+N+ADI+S
Sbjct: 809  QFKTTTL-TSTTQGTKDNQNLQKQEGLAELNPVVP------PDISSSFTKSLQNIADIVS 861

Query: 1658 IDNTSVT---VAEPVLSQQIPENMDRVEMGIIATDCDNRQNKNCLPPEEHTKEPSQSPNP 1488
            +  T  T   V++ V SQ +    DRV+     ++ D +      P  E     S S N 
Sbjct: 862  VSQTCTTPPFVSQNVASQPVQIKSDRVDGKTGTSNSDQKMGPASSP--EVVAASSLSQNT 919

Query: 1487 WGEMEHIFEGYDELQKATILXXXXXXXXEQNKMFAAKKXXXXXXXXXXXLNSAKFIEIDP 1308
            W ++EH+FEGYD+ QKA I         EQ K+FAA+K           LNSAKF+E+DP
Sbjct: 920  WEDVEHLFEGYDDQQKAAIQRERARRIEEQKKLFAARKLCLVLDLDHTLLNSAKFVEVDP 979

Query: 1307 VHQELLRMKEEKERGKSQRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKRY 1128
            VH E+LR KEE++R K  RHLFRFPHMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK Y
Sbjct: 980  VHDEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLY 1039

Query: 1127 ATEMAKLLDPSGALFSGRVISRGDDGESLDGDER-PKIKDLDGVLGMESAVVIIDDSVRV 951
            ATEMAK+LDP G LF+GRV+SRGDDG+ LDGDER PK KDL+GVLGMES VVIIDDS+RV
Sbjct: 1040 ATEMAKVLDPKGVLFAGRVVSRGDDGDLLDGDERVPKSKDLEGVLGMESGVVIIDDSLRV 1099

Query: 950  WPHYKLNMIAVERYIYFPCSRRQFGLLGPSLLEVGHDERSENGTLASSLAVIERIHRTFF 771
            WPH KLN+I VERYIYFPCSRRQFGL GPSLLE+ HD+R E+GTLA SLAVIERIH+ FF
Sbjct: 1100 WPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDQRPEDGTLACSLAVIERIHQNFF 1159

Query: 770  SHQCLKNLDVRNILASEQKKILAGCCIVFSRVFPVGLANPKLHPLWQTAEQFGAVCTNQI 591
            +H  L   DVRNIL+SEQ+KILAGC +VFSRVFPVG  NP LHPLWQTAEQFGAVCTNQI
Sbjct: 1160 THHSLDEADVRNILSSEQRKILAGCRVVFSRVFPVGEVNPHLHPLWQTAEQFGAVCTNQI 1219

Query: 590  DERVTHIVATSLGTDKVNWALSSRRFVVQPGWVEASAFLYRRADERAFAV 441
            DE+VTH+VA SLGTDKVNWALS+ RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 1220 DEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQEFAI 1269


>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
            gi|550343308|gb|EEE79627.2| hypothetical protein
            POPTR_0003s16280g [Populus trichocarpa]
          Length = 1247

 Score =  677 bits (1747), Expect = 0.0
 Identities = 426/949 (44%), Positives = 540/949 (56%), Gaps = 91/949 (9%)
 Frame = -3

Query: 3014 VHIERNMGPEALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTRE------ILKPLSI 2853
            VH + N   E  + G+ S K   G   PL+D  + HD DSLPSPTRE      + + L I
Sbjct: 313  VHNKPNFSIEPPKPGVPSFK-SRGVLLPLLDLKKFHDEDSLPSPTRETAPSFPVQRLLPI 371

Query: 2852 TKNQAQPNLPAISLADKSEDAIAQLCKSDALEVVSVYQPKFGSN-LLTDRLPNPIPSGEL 2676
                    LP   +A  +E+      ++DAL+ VS YQ KF  N   T+ LP+P PS E 
Sbjct: 372  GDGMISSGLPVPKVASITEEPRVHPYETDALKAVSSYQKKFNLNSFFTNELPSPTPSEES 431

Query: 2675 HDGNGDEEAQ--------------DLSDRVSSVP----------------YMVSSTKETL 2586
             +G+GD   +               +SDR S+ P                ++ +S+   +
Sbjct: 432  GNGDGDTAGEVSSSSTVNYRTVNPPVSDRKSASPSPSPPPPPPPPPPPPPHLNNSSIRVV 491

Query: 2585 VVGITGEMASDCPVLSCPARSSSLGPAHLEVVTPA--------VNXXXXXXXXXQPIGGM 2430
            +        S     +  A + S  P    V T A                   +P G +
Sbjct: 492  IPTRNSAPVSSGTSSTVKASAKSRDPRLRYVNTDASALDQNQRTLLMVNNPPRAEPSGAI 551

Query: 2429 MNSKNCNIGEQSVLEGRSLKRQRNGF------------------------------TPSD 2340
              S+   I E+ VL+G SLKRQRN F                                + 
Sbjct: 552  AGSRKQKI-EEDVLDGTSLKRQRNSFDNFGVVRDIRSMTGTGGWLEDTDMAEPQTVNKNQ 610

Query: 2339 ITEKTQPNEPSNNNL----SGNMKSDLRKAEHGEKQLAISAIHNVQSSEREQFASLGTSN 2172
              E  +P +  NN +    +G++ S +  +  G  Q+ +  I+ +  SE+   A + ++ 
Sbjct: 611  WAENAEPGQRINNGVVCPSTGSVMSSVSCS--GNVQVPVMGINTIAGSEQ---APVTSTT 665

Query: 2171 AVSLPDLIKDVGVNSTTLVHLVK--KYHRLGTNSQQKSGDSAKKATSLFSST----AIPL 2010
              SLPDL+KD+ VN T L++++K  +  RL  + QQK  D AK  +   SS     AIP 
Sbjct: 666  TASLPDLLKDITVNPTMLINILKMGQQQRLALDGQQKLADPAKSTSHPPSSNTVLGAIPE 725

Query: 2009 FKKYFNPREKPIVKPQITDETPTN--PQGELSKIRLKDRDPRKNLHYGTFQQNKRSRFEQ 1836
                 +     + +     + P+      E  KIR+K RDPR+ LH    Q+      EQ
Sbjct: 726  VNAVSSLPSGILPRSAGKAQGPSQIATTDESGKIRMKPRDPRRVLHNNALQRAGSLGSEQ 785

Query: 1835 FEANGADPSVSQSGKDSFSLXXXXXXXXXXXXXXXXXXQLPDIASEFTKNLKNVADILSI 1656
            F+      S +Q  KD+ +L                    PDI+S FTK+LKN+ADI+S+
Sbjct: 786  FKTTTL-TSTTQGTKDNQNLQKQEGLAELKPVVP------PDISSPFTKSLKNIADIVSV 838

Query: 1655 DNTSVT---VAEPVLSQQIPENMDRVEMGIIATDCDNRQNKNCLPPEEHTKEPSQSPNPW 1485
              T  T   V++ V SQ +    DRV+     ++ D +      P  E     S S N W
Sbjct: 839  SQTCTTPPFVSQNVASQPVQIKSDRVDGKTGISNSDQKMGPASSP--EVVAASSLSQNTW 896

Query: 1484 GEMEHIFEGYDELQKATILXXXXXXXXEQNKMFAAKKXXXXXXXXXXXLNSAKFIEIDPV 1305
             ++EH+FEGYD+ QKA I         EQ K+FAA+K           LNSAKF+E+DPV
Sbjct: 897  EDVEHLFEGYDDQQKAAIQRERARRIEEQKKLFAARKLCLVLDLDHTLLNSAKFVEVDPV 956

Query: 1304 HQELLRMKEEKERGKSQRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKRYA 1125
            H E+LR KEE++R K  RHLFRFPHMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK YA
Sbjct: 957  HDEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYA 1016

Query: 1124 TEMAKLLDPSGALFSGRVISRGDDGESLDGDER-PKIKDLDGVLGMESAVVIIDDSVRVW 948
            TEMAK+LDP G LF+GRV+SRGDDG+ LDGDER PK KDL+GVLGMES VVIIDDS+RVW
Sbjct: 1017 TEMAKVLDPKGVLFAGRVVSRGDDGDLLDGDERVPKSKDLEGVLGMESGVVIIDDSLRVW 1076

Query: 947  PHYKLNMIAVERYIYFPCSRRQFGLLGPSLLEVGHDERSENGTLASSLAVIERIHRTFFS 768
            PH KLN+I VERYIYFPCSRRQFGL GPSLLE+ HDER E+GTLA SLAVIERIH+ FF+
Sbjct: 1077 PHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIERIHQNFFT 1136

Query: 767  HQCLKNLDVRNILASEQKKILAGCCIVFSRVFPVGLANPKLHPLWQTAEQFGAVCTNQID 588
            H  L   DVRNILASEQ+KILAGC IVFSRVFPVG  NP LHPLWQ+AEQFGAVCTNQID
Sbjct: 1137 HHSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEVNPHLHPLWQSAEQFGAVCTNQID 1196

Query: 587  ERVTHIVATSLGTDKVNWALSSRRFVVQPGWVEASAFLYRRADERAFAV 441
            E+VTH+VA SLGTDKVNWALS+ RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 1197 EQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 1245


>ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
            gi|550343307|gb|EEE79693.2| hypothetical protein
            POPTR_0003s16280g [Populus trichocarpa]
          Length = 1030

 Score =  677 bits (1747), Expect = 0.0
 Identities = 426/949 (44%), Positives = 540/949 (56%), Gaps = 91/949 (9%)
 Frame = -3

Query: 3014 VHIERNMGPEALRTGLTSCKVGTGGFGPLVDFHRHHDMDSLPSPTRE------ILKPLSI 2853
            VH + N   E  + G+ S K   G   PL+D  + HD DSLPSPTRE      + + L I
Sbjct: 96   VHNKPNFSIEPPKPGVPSFK-SRGVLLPLLDLKKFHDEDSLPSPTRETAPSFPVQRLLPI 154

Query: 2852 TKNQAQPNLPAISLADKSEDAIAQLCKSDALEVVSVYQPKFGSN-LLTDRLPNPIPSGEL 2676
                    LP   +A  +E+      ++DAL+ VS YQ KF  N   T+ LP+P PS E 
Sbjct: 155  GDGMISSGLPVPKVASITEEPRVHPYETDALKAVSSYQKKFNLNSFFTNELPSPTPSEES 214

Query: 2675 HDGNGDEEAQ--------------DLSDRVSSVP----------------YMVSSTKETL 2586
             +G+GD   +               +SDR S+ P                ++ +S+   +
Sbjct: 215  GNGDGDTAGEVSSSSTVNYRTVNPPVSDRKSASPSPSPPPPPPPPPPPPPHLNNSSIRVV 274

Query: 2585 VVGITGEMASDCPVLSCPARSSSLGPAHLEVVTPA--------VNXXXXXXXXXQPIGGM 2430
            +        S     +  A + S  P    V T A                   +P G +
Sbjct: 275  IPTRNSAPVSSGTSSTVKASAKSRDPRLRYVNTDASALDQNQRTLLMVNNPPRAEPSGAI 334

Query: 2429 MNSKNCNIGEQSVLEGRSLKRQRNGF------------------------------TPSD 2340
              S+   I E+ VL+G SLKRQRN F                                + 
Sbjct: 335  AGSRKQKI-EEDVLDGTSLKRQRNSFDNFGVVRDIRSMTGTGGWLEDTDMAEPQTVNKNQ 393

Query: 2339 ITEKTQPNEPSNNNL----SGNMKSDLRKAEHGEKQLAISAIHNVQSSEREQFASLGTSN 2172
              E  +P +  NN +    +G++ S +  +  G  Q+ +  I+ +  SE+   A + ++ 
Sbjct: 394  WAENAEPGQRINNGVVCPSTGSVMSSVSCS--GNVQVPVMGINTIAGSEQ---APVTSTT 448

Query: 2171 AVSLPDLIKDVGVNSTTLVHLVK--KYHRLGTNSQQKSGDSAKKATSLFSST----AIPL 2010
              SLPDL+KD+ VN T L++++K  +  RL  + QQK  D AK  +   SS     AIP 
Sbjct: 449  TASLPDLLKDITVNPTMLINILKMGQQQRLALDGQQKLADPAKSTSHPPSSNTVLGAIPE 508

Query: 2009 FKKYFNPREKPIVKPQITDETPTN--PQGELSKIRLKDRDPRKNLHYGTFQQNKRSRFEQ 1836
                 +     + +     + P+      E  KIR+K RDPR+ LH    Q+      EQ
Sbjct: 509  VNAVSSLPSGILPRSAGKAQGPSQIATTDESGKIRMKPRDPRRVLHNNALQRAGSLGSEQ 568

Query: 1835 FEANGADPSVSQSGKDSFSLXXXXXXXXXXXXXXXXXXQLPDIASEFTKNLKNVADILSI 1656
            F+      S +Q  KD+ +L                    PDI+S FTK+LKN+ADI+S+
Sbjct: 569  FKTTTL-TSTTQGTKDNQNLQKQEGLAELKPVVP------PDISSPFTKSLKNIADIVSV 621

Query: 1655 DNTSVT---VAEPVLSQQIPENMDRVEMGIIATDCDNRQNKNCLPPEEHTKEPSQSPNPW 1485
              T  T   V++ V SQ +    DRV+     ++ D +      P  E     S S N W
Sbjct: 622  SQTCTTPPFVSQNVASQPVQIKSDRVDGKTGISNSDQKMGPASSP--EVVAASSLSQNTW 679

Query: 1484 GEMEHIFEGYDELQKATILXXXXXXXXEQNKMFAAKKXXXXXXXXXXXLNSAKFIEIDPV 1305
             ++EH+FEGYD+ QKA I         EQ K+FAA+K           LNSAKF+E+DPV
Sbjct: 680  EDVEHLFEGYDDQQKAAIQRERARRIEEQKKLFAARKLCLVLDLDHTLLNSAKFVEVDPV 739

Query: 1304 HQELLRMKEEKERGKSQRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKRYA 1125
            H E+LR KEE++R K  RHLFRFPHMGMWTKLRPG+WNFLEKASKLYELHLYTMGNK YA
Sbjct: 740  HDEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYA 799

Query: 1124 TEMAKLLDPSGALFSGRVISRGDDGESLDGDER-PKIKDLDGVLGMESAVVIIDDSVRVW 948
            TEMAK+LDP G LF+GRV+SRGDDG+ LDGDER PK KDL+GVLGMES VVIIDDS+RVW
Sbjct: 800  TEMAKVLDPKGVLFAGRVVSRGDDGDLLDGDERVPKSKDLEGVLGMESGVVIIDDSLRVW 859

Query: 947  PHYKLNMIAVERYIYFPCSRRQFGLLGPSLLEVGHDERSENGTLASSLAVIERIHRTFFS 768
            PH KLN+I VERYIYFPCSRRQFGL GPSLLE+ HDER E+GTLA SLAVIERIH+ FF+
Sbjct: 860  PHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIERIHQNFFT 919

Query: 767  HQCLKNLDVRNILASEQKKILAGCCIVFSRVFPVGLANPKLHPLWQTAEQFGAVCTNQID 588
            H  L   DVRNILASEQ+KILAGC IVFSRVFPVG  NP LHPLWQ+AEQFGAVCTNQID
Sbjct: 920  HHSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEVNPHLHPLWQSAEQFGAVCTNQID 979

Query: 587  ERVTHIVATSLGTDKVNWALSSRRFVVQPGWVEASAFLYRRADERAFAV 441
            E+VTH+VA SLGTDKVNWALS+ RFVV PGWVEASA LYRRA+E+ FA+
Sbjct: 980  EQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 1028