BLASTX nr result

ID: Papaver29_contig00034456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00034456
         (669 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDY25380.1| BnaA05g19040D [Brassica napus]                         60   1e-06
ref|XP_009139649.1| PREDICTED: uncharacterized protein LOC103863...    59   3e-06
ref|XP_013637330.1| PREDICTED: uncharacterized protein LOC106342...    59   3e-06
ref|XP_013725026.1| PREDICTED: inner membrane protein BB_0250-li...    58   6e-06

>emb|CDY25380.1| BnaA05g19040D [Brassica napus]
          Length = 208

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 10/71 (14%)
 Frame = +2

Query: 218 LTTVVTLDGTWKSLVELFFKGFP---------IYMIHIG-IF**SGASDDVCSKLGIGEE 367
           L  ++TLDGTW+S  E F +  P         +   ++G +F  SGASDDVCSKLGIG+E
Sbjct: 72  LARMLTLDGTWQSFAESFSRNAPYLGGVCISDMIPFYLGKLFRQSGASDDVCSKLGIGKE 131

Query: 368 EEVGITQDVQQ 400
           + +GITQ VQ+
Sbjct: 132 KAMGITQAVQK 142


>ref|XP_009139649.1| PREDICTED: uncharacterized protein LOC103863647 [Brassica rapa]
           gi|923606791|ref|XP_013742943.1| PREDICTED: inner
           membrane protein BB_0250-like [Brassica napus]
           gi|674932169|emb|CDY01113.1| BnaA04g07060D [Brassica
           napus]
          Length = 353

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 18/79 (22%)
 Frame = +2

Query: 218 LTTVVTLDGTWKSLVELFFKGFPIYMIHIG------------------IF**SGASDDVC 343
           L  ++TLDGTW+S  E F +  P  M  +                   +F  SGASDDVC
Sbjct: 177 LARMLTLDGTWQSFAESFSRNAPYIMSTVSWVYWGVCISDMIPFYLGKLFRQSGASDDVC 236

Query: 344 SKLGIGEEEEVGITQDVQQ 400
           SKLGIG+E+ +GITQ VQ+
Sbjct: 237 SKLGIGKEKAMGITQAVQK 255


>ref|XP_013637330.1| PREDICTED: uncharacterized protein LOC106342836 [Brassica oleracea
           var. oleracea] gi|923927386|ref|XP_013732613.1|
           PREDICTED: uncharacterized protein LOC106436199
           [Brassica napus] gi|674885219|emb|CDY47333.1|
           BnaCnng14700D [Brassica napus]
          Length = 359

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 18/79 (22%)
 Frame = +2

Query: 218 LTTVVTLDGTWKSLVELFFKGFPIYMIHIG------------------IF**SGASDDVC 343
           L  ++TLDGTW+S  E F +  P  M  +                   +F  SGASDDVC
Sbjct: 183 LARMLTLDGTWQSFAESFSRNAPYIMSTVSWVYWGVCISDMIPFYLGKLFRKSGASDDVC 242

Query: 344 SKLGIGEEEEVGITQDVQQ 400
           SKLGIG+E+ +GITQ VQ+
Sbjct: 243 SKLGIGKEKAMGITQAVQK 261


>ref|XP_013725026.1| PREDICTED: inner membrane protein BB_0250-like [Brassica napus]
          Length = 267

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 18/79 (22%)
 Frame = +2

Query: 218 LTTVVTLDGTWKSLVELFFKGFPIYMIHIG------------------IF**SGASDDVC 343
           L  ++TLDGTW+S  E F +  P  M  +                   +F  SG+SDDVC
Sbjct: 91  LARMLTLDGTWQSFAESFSRNAPYIMSTVSWVYWGVCISDMIPFYLGKLFRQSGSSDDVC 150

Query: 344 SKLGIGEEEEVGITQDVQQ 400
           SKLGIG+E+ +GITQ VQ+
Sbjct: 151 SKLGIGKEKAMGITQAVQK 169


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