BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00030736
         (1403 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62437.1| hypothetical protein VITISV_010848 [Vitis vinifera]   301   1e-78
emb|CAN67087.1| hypothetical protein VITISV_031092 [Vitis vinifera]   263   3e-67
emb|CAN64075.1| hypothetical protein VITISV_017997 [Vitis vinifera]   260   2e-66
gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group]     258   7e-66
gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]     258   7e-66
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]         258   7e-66
emb|CAN66626.1| hypothetical protein VITISV_001861 [Vitis vinifera]   258   9e-66
gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subc...   257   2e-65
gb|AAR01736.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   257   2e-65
ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449...   256   3e-65
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...   256   3e-65
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   256   3e-65
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         256   4e-65
emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]         256   4e-65
gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group...   255   6e-65
gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-...   255   6e-65
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   255   6e-65
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...   255   6e-65
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   255   6e-65
gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group...   255   7e-65

>emb|CAN62437.1| hypothetical protein VITISV_010848 [Vitis vinifera]
          Length = 622

 Score =  301 bits (770), Expect = 1e-78
 Identities = 169/389 (43%), Positives = 218/389 (56%), Gaps = 52/389 (13%)
 Frame = -2

Query: 1018 LDNKYKISEASNKKFLICNFMDFKMVDSKSIIAQVSELLLIVNQLKDAGIDLVSAFVVGV 839
            ++ KY + +   +K+ I NF +F+M   + + +Q+ +  L++N L    I L   FV G 
Sbjct: 1    MNKKYSLEDXGTQKYAIENFKNFQMTXDRDVSSQIHDYHLLINDLAIEDIKLPEPFVAGY 60

Query: 838  IISRLPPSWNGYKKKLKHAETDYDLEALQRHLRIEEDSRKRE------------------ 713
            ++   P SW  YK  +KH      LE +  H++IEE +R R+                  
Sbjct: 61   LVETFPESWKDYKNNMKHKRKQMFLEDVIIHIKIEEQNRNRDNAEKVKELSSKANVYKGI 120

Query: 712  ----LKDSPHSENHSKVNSVEESKTPNSLKP------KNDTQFXXXXXXXXXXKGAVGP- 566
                +K     EN      + ++  P SLK       KN T               V   
Sbjct: 121  SYAFIKYKNEVENQRNHEIIHKTTPPYSLKSNGVVERKNKTLKEMMNAMLKYKAHLVAKG 180

Query: 565  -----------------------CLIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPE 455
                                    LIALASIH LV+HQMDVKTAFLNGDLEEEIYMEQ E
Sbjct: 181  FKQRKDVDYFDNFALVTTIASSRVLIALASIHNLVIHQMDVKTAFLNGDLEEEIYMEQLE 240

Query: 454  GFISPGQEKKVCKLVKSLYGLKQAPMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCV 275
            G +  G+EKKVCKLVKSLYGLKQAP QWH KFD V+++ G+ +NDADKCIY+K++ + CV
Sbjct: 241  GRVVLGKEKKVCKLVKSLYGLKQAPKQWHNKFDHVLVTNGYSINDADKCIYNKYEDNTCV 300

Query: 274  ILCLYVDDMLIFGSDISVVEETKKFLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHY 95
            ++CLYVDDMLIFG+ + VV ETKKFL   FDMKDLGEA+VILGIKI R  +EL L+Q HY
Sbjct: 301  VICLYVDDMLIFGTSLEVVCETKKFLGPKFDMKDLGEAEVILGIKITRTPNELKLSQEHY 360

Query: 94   IEKFLKKYGHFDDNPAPTPLDHTIKLMKN 8
            +EK L+K+  FD     TP D    L KN
Sbjct: 361  VEKILRKFECFDCKLVSTPYDPNSLLKKN 389


>emb|CAN67087.1| hypothetical protein VITISV_031092 [Vitis vinifera]
          Length = 484

 Score =  263 bits (672), Expect = 3e-67
 Identities = 125/185 (67%), Positives = 151/185 (81%)
 Frame = -2

Query: 562 LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
           LIALASIH LV+HQMDVKTAFLNGDLEEEIYMEQP+G + P +EKKVCKLVKSLYGLKQA
Sbjct: 10  LIALASIHNLVIHQMDVKTAFLNGDLEEEIYMEQPKGCVVPEREKKVCKLVKSLYGLKQA 69

Query: 382 PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
           P QWH KFD V+++ G+ +ND DKCIY+K++ + CV++ +YVDDMLIFG+ + VV ETKK
Sbjct: 70  PKQWHNKFDHVLVTNGYSINDVDKCIYNKYEDNTCVVIYIYVDDMLIFGTSLEVVCETKK 129

Query: 202 FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
           FL S FDMKDLGEA+VILGIKI R  ++L L+Q HY+EK L+K+ HFD  P  TP D   
Sbjct: 130 FLGSKFDMKDLGEAEVILGIKITRTPNKLKLSQEHYVEKILRKFEHFDCKPVSTPYDPIS 189

Query: 22  KLMKN 8
           +L KN
Sbjct: 190 QLKKN 194


>emb|CAN64075.1| hypothetical protein VITISV_017997 [Vitis vinifera]
          Length = 635

 Score =  260 bits (664), Expect = 2e-66
 Identities = 124/187 (66%), Positives = 154/187 (82%), Gaps = 2/187 (1%)
 Frame = -2

Query: 562 LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
           L+ALASIH LV+HQMDVKTAFLNGDLEEEIYM+QP+G + PG+EKKVCKLVKSLYGLKQA
Sbjct: 315 LLALASIHNLVIHQMDVKTAFLNGDLEEEIYMDQPKGCVVPGKEKKVCKLVKSLYGLKQA 374

Query: 382 PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
           P QWH KFD V+++ G+ +NDADKCIY+K++ + CV++CLYVDDMLIFG+++ VV ETKK
Sbjct: 375 PKQWHNKFDHVLVTNGYSINDADKCIYNKYEDNTCVVICLYVDDMLIFGTNLEVVCETKK 434

Query: 202 FLSSNFDMKDLG--EADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDH 29
           FL S FDMK+LG  E +VILGIKI+R  +EL L+  HY+EK L+K+ HFD  P  T  D 
Sbjct: 435 FLGSKFDMKNLGEVEVEVILGIKIIRTPNELKLSXEHYVEKTLRKFEHFDCKPVSTXYDP 494

Query: 28  TIKLMKN 8
           + +L KN
Sbjct: 495 SSQLKKN 501


>gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1320

 Score =  258 bits (660), Expect = 7e-66
 Identities = 119/185 (64%), Positives = 149/185 (80%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            L++LA+ H L+VHQMDVKTAFLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 887  LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 946

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFDK + S GF VN+ADKC+Y +H     VILCLYVDD+LIFG+++ V+ E K 
Sbjct: 947  PKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1006

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
            FLS NFDMKDLG ADVIL IK++R  + + L QSHY+EK L ++G+ D  P+PTP DH++
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDHSL 1066

Query: 22   KLMKN 8
             L KN
Sbjct: 1067 LLRKN 1071



 Score =  104 bits (259), Expect = 2e-19
 Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
 Frame = -2

Query: 1288 RLERFDGEGFTRWQETVKFFLITIKLWYILEDGLEEIPAATDNDTEELKARRKQRQEDDF 1109
            R ++F G  F RWQ  V  +L ++K +++     E +  A          ++KQ +E   
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTSMKCFWVSTGKPEGVLTAE---------QQKQFEEATT 59

Query: 1108 MCRGHILNALDKHVYNAHRSIGTAKGLWTALDNKYKISEASNKKFLICNFMDFKMVDSKS 929
            +  G IL+ L   +   +  +  AK LW AL+ K+  ++ASN  +++  F D+KM D++S
Sbjct: 60   LFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRS 119

Query: 928  IIAQVSELLLIVNQLKDAGIDLVSAFVVGVIISRLPPSWNGYKKKLKHAETDYDLEALQR 749
            ++ Q  E+  +  +L+     L   FV G II++LPPSW  +   LKH   +Y +E L  
Sbjct: 120  VVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIA 179

Query: 748  HLRIEEDSRKRELKDSPHSENHSKVNSVE--ESKTPNSLKPKNDTQF 614
             L +EE + +++   S      S  N V   ++K+    K +  T F
Sbjct: 180  SLDVEEKAWEKDAA-SKGDGGQSSANVVHKAQNKSKGKYKAQQTTNF 225


>gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]
          Length = 1297

 Score =  258 bits (660), Expect = 7e-66
 Identities = 119/185 (64%), Positives = 149/185 (80%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            L++LA+ H L+VHQMDVKTAFLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 887  LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 946

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFDK + S GF VN+ADKC+Y +H     VILCLYVDD+LIFG+++ V+ E K 
Sbjct: 947  PKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1006

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
            FLS NFDMKDLG ADVIL IK++R  + + L QSHY+EK L ++G+ D  P+PTP DH++
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDHSL 1066

Query: 22   KLMKN 8
             L KN
Sbjct: 1067 LLRKN 1071



 Score =  104 bits (259), Expect = 2e-19
 Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
 Frame = -2

Query: 1288 RLERFDGEGFTRWQETVKFFLITIKLWYILEDGLEEIPAATDNDTEELKARRKQRQEDDF 1109
            R ++F G  F RWQ  V  +L ++K +++     E +  A          ++KQ +E   
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTSMKCFWVSTGKPEGVLTAE---------QQKQFEEATT 59

Query: 1108 MCRGHILNALDKHVYNAHRSIGTAKGLWTALDNKYKISEASNKKFLICNFMDFKMVDSKS 929
            +  G IL+ L   +   +  +  AK LW AL+ K+  ++ASN  +++  F D+KM D++S
Sbjct: 60   LFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRS 119

Query: 928  IIAQVSELLLIVNQLKDAGIDLVSAFVVGVIISRLPPSWNGYKKKLKHAETDYDLEALQR 749
            ++ Q  E+  +  +L+     L   FV G II++LPPSW  +   LKH   +Y +E L  
Sbjct: 120  VVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIA 179

Query: 748  HLRIEEDSRKRELKDSPHSENHSKVNSVE--ESKTPNSLKPKNDTQF 614
             L +EE + +++   S      S  N V   ++K+    K +  T F
Sbjct: 180  SLDVEEKAWEKDAA-SKGDGGQSSANVVHKAQNKSKGKYKAQQTTNF 225


>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  258 bits (660), Expect = 7e-66
 Identities = 119/185 (64%), Positives = 150/185 (81%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            L++LA+ H L+VHQMDVKTAFLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 887  LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 946

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFDK ++S GF VN+ADKC+Y +H     VILCLYVDD+LIFG+++ V+ E K 
Sbjct: 947  PKQWHEKFDKTLISAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1006

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
            FLS NFDMKDLG ADVIL IK++R  +E+ L QSHY+EK L ++G+ D  P+PTP D ++
Sbjct: 1007 FLSKNFDMKDLGVADVILNIKLIRGENEITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066

Query: 22   KLMKN 8
             L KN
Sbjct: 1067 LLRKN 1071



 Score =  107 bits (266), Expect = 3e-20
 Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
 Frame = -2

Query: 1288 RLERFDGEGFTRWQETVKFFLITIKLWYILEDGLEEIPAATDNDTEELKARRKQRQEDDF 1109
            R ++F G  F RWQ  V  +L  +K +++     E +  A          ++KQ +E   
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE---------QQKQFEEATT 59

Query: 1108 MCRGHILNALDKHVYNAHRSIGTAKGLWTALDNKYKISEASNKKFLICNFMDFKMVDSKS 929
            +  G IL+ L   +   +  +  AK LW AL+ K+  ++ASN  +++  F D+KM D++S
Sbjct: 60   LFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRS 119

Query: 928  IIAQVSELLLIVNQLKDAGIDLVSAFVVGVIISRLPPSWNGYKKKLKHAETDYDLEALQR 749
            ++ Q  E+  +  +L+     L   FV G II++LPPSW  +   LKH   +Y +E L  
Sbjct: 120  VVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIA 179

Query: 748  HLRIEEDSRKRELKDSPHSENHSKVNSVE--ESKTPNSLKPKNDTQF 614
             L +EE +R+++   S      S  N V   ++K+    K +  T F
Sbjct: 180  SLDVEEKAREKDAA-SKGDGGQSSANVVHKAQNKSKGKYKAQQTTNF 225


>emb|CAN66626.1| hypothetical protein VITISV_001861 [Vitis vinifera]
          Length = 422

 Score =  258 bits (659), Expect = 9e-66
 Identities = 120/186 (64%), Positives = 151/186 (81%)
 Frame = -2

Query: 562 LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
           LIA+A+IH L +HQMDVK AFLNG+L+EEIYM+Q EGFI+PGQE+KVCKLVKSLYGLKQA
Sbjct: 43  LIAIAAIHNLEIHQMDVKXAFLNGELDEEIYMDQLEGFIAPGQERKVCKLVKSLYGLKQA 102

Query: 382 PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
           P QWHEKFD  ++S GF +N+ DKC+Y K++  G VI+CLYVDDMLI GSD ++++ TK+
Sbjct: 103 PKQWHEKFDNAMISNGFKINECDKCVYVKNNQKGYVIVCLYVDDMLIIGSDTNMIKMTKQ 162

Query: 202 FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
            LSS FDMKDLG AD+ILGIK+ +  D L+L+QSHYIEK L+K+  +D  P  TP+D  +
Sbjct: 163 MLSSRFDMKDLGVADIILGIKVSKTSDGLILSQSHYIEKILEKFKKYDIRPKKTPMDVNL 222

Query: 22  KLMKNT 5
            L KNT
Sbjct: 223 HLFKNT 228


>gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1235

 Score =  257 bits (657), Expect = 2e-65
 Identities = 119/185 (64%), Positives = 149/185 (80%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            L++LA+ H L+VHQMDVKTAFLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 820  LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 879

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFDK + S GF VN+ADKC+Y +H     VILCLYVDD+LIFG+++ V+ E K 
Sbjct: 880  PKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 939

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
            FLS NFDMKDLG ADVIL IK++R  +E+ L QSHY+EK L ++G+ D  P+PTP D ++
Sbjct: 940  FLSQNFDMKDLGVADVILNIKLIRGENEITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 999

Query: 22   KLMKN 8
             L KN
Sbjct: 1000 LLRKN 1004



 Score =  108 bits (271), Expect = 9e-21
 Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 1/226 (0%)
 Frame = -2

Query: 1288 RLERFDGEGFTRWQETVKFFLITIKLWYILEDGLEEIPAATDNDTEELKARRKQRQEDDF 1109
            R ++F G  F RWQ  V  +L  +K +++     E +  A          ++KQ +E   
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE---------QQKQFEEATT 59

Query: 1108 MCRGHILNALDKHVYNAHRSIGTAKGLWTALDNKYKISEASNKKFLICNFMDFKMVDSKS 929
            +  G IL+ L   +   +  +  AK LW AL+ K+  ++ASN  +++  F D+KM D++S
Sbjct: 60   LFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRS 119

Query: 928  IIAQVSELLLIVNQLKDAGIDLVSAFVVGVIISRLPPSWNGYKKKLKHAETDYDLEALQR 749
            ++ Q  E+  +  +L+     L+  FV G II++LPPSW  +   LKH   +Y +E L  
Sbjct: 120  VVEQAHEIQTMAKELELLKCVLLDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIA 179

Query: 748  HLRIEEDSRKRE-LKDSPHSENHSKVNSVEESKTPNSLKPKNDTQF 614
             L +EE +R+++        ++ S V    ++K+    K +  T F
Sbjct: 180  SLDVEEKAREKDAASKGDGGQSSSNVVHKAQNKSKGKYKAQQTTNF 225


>gb|AAR01736.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
            gi|108709997|gb|ABF97792.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1177

 Score =  257 bits (657), Expect = 2e-65
 Identities = 119/185 (64%), Positives = 149/185 (80%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            L++LA+ H L+VHQMDVKTAFLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 812  LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 871

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFDK + S GF VN+ADKC+Y +H     VILCLYVDD+LIFG+++ V+ E K 
Sbjct: 872  PKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 931

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
            FLS NFDMKDLG ADVIL IK++R  +E+ L QSHY+EK L ++G+ D  P+PTP D ++
Sbjct: 932  FLSQNFDMKDLGVADVILNIKLIRGENEITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 991

Query: 22   KLMKN 8
             L KN
Sbjct: 992  LLRKN 996



 Score =  108 bits (271), Expect = 9e-21
 Identities = 66/214 (30%), Positives = 110/214 (51%)
 Frame = -2

Query: 1288 RLERFDGEGFTRWQETVKFFLITIKLWYILEDGLEEIPAATDNDTEELKARRKQRQEDDF 1109
            R ++F G  F RWQ  V  +LI +K +++     + I  A          ++KQ +E   
Sbjct: 36   RPDKFTGVHFKRWQIRVTLWLIAMKCFWVSTGKSKGILTAD---------QQKQFEEATT 86

Query: 1108 MCRGHILNALDKHVYNAHRSIGTAKGLWTALDNKYKISEASNKKFLICNFMDFKMVDSKS 929
            +  G IL+ L   +   +  +  AK LW AL+ K+  ++ASN  ++I  F D+KM D++S
Sbjct: 87   LFVGCILSVLGYRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIIEQFHDYKMADNRS 146

Query: 928  IIAQVSELLLIVNQLKDAGIDLVSAFVVGVIISRLPPSWNGYKKKLKHAETDYDLEALQR 749
            ++ Q  E+  +  +L+     L++ FV G II++LPPSW  +   LKH   +Y +E L  
Sbjct: 147  VVKQAHEIQTMAKELELLKCVLLNKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIA 206

Query: 748  HLRIEEDSRKRELKDSPHSENHSKVNSVEESKTP 647
               +EE +R+   KD+P   +  K    +  K P
Sbjct: 207  SFDVEEKARE---KDAPSKGDGGKCPQRKGMKAP 237


>ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449768 [Malus domestica]
          Length = 2699

 Score =  256 bits (654), Expect = 3e-65
 Identities = 121/187 (64%), Positives = 148/187 (79%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            LIA+A+++   +HQMDVKTAFLNG+L+EEIYMEQPEGF+  GQE KVCKLVKSLYGLKQA
Sbjct: 2339 LIAIAAVYNFDIHQMDVKTAFLNGELDEEIYMEQPEGFVLKGQESKVCKLVKSLYGLKQA 2398

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFD  +L+YGF +N++DKC+Y K +   CVI+CLYVDDMLI G +  V+ +TKK
Sbjct: 2399 PKQWHEKFDHTLLTYGFKINESDKCVYIKSNDKTCVIVCLYVDDMLIMGINKDVINKTKK 2458

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
             L+S+FDMKDLG+ADVILGI+I R  +  VLTQSHY EK L+++G FD  PA T  D   
Sbjct: 2459 MLNSSFDMKDLGQADVILGIQIKRNSEGYVLTQSHYPEKILRRFGQFDCKPAATSFDAGC 2518

Query: 22   KLMKNTG 2
            KL KN G
Sbjct: 2519 KLEKNKG 2525


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  256 bits (654), Expect = 3e-65
 Identities = 119/185 (64%), Positives = 148/185 (80%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            L++LA+ H L+VHQMDVKTAFLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 887  LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQA 946

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFDK + S GF VN+ADKC+Y +H     VILCLYVDD+LIFG++I V+ E K 
Sbjct: 947  PKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKS 1006

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
            FLS NFDMKDLG ADVIL IK++R  + + L QSHY+EK L ++G+ D  P+PTP D ++
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066

Query: 22   KLMKN 8
             L KN
Sbjct: 1067 SLRKN 1071



 Score =  107 bits (266), Expect = 3e-20
 Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
 Frame = -2

Query: 1288 RLERFDGEGFTRWQETVKFFLITIKLWYILEDGLEEIPAATDNDTEELKARRKQRQEDDF 1109
            R ++F G  F RWQ  V  +L  +K +++     E +  A          ++KQ +E   
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE---------QQKQFEEATT 59

Query: 1108 MCRGHILNALDKHVYNAHRSIGTAKGLWTALDNKYKISEASNKKFLICNFMDFKMVDSKS 929
            +  G IL+ L   +   +  +  AK LW AL+ K+  ++ASN  +++  F D+KM D++S
Sbjct: 60   LFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRS 119

Query: 928  IIAQVSELLLIVNQLKDAGIDLVSAFVVGVIISRLPPSWNGYKKKLKHAETDYDLEALQR 749
            ++ Q  E+  +  +L+     L   FV G II++LPPSW  +   LKH   +Y +E L  
Sbjct: 120  VVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIA 179

Query: 748  HLRIEEDSRKRELKDSPHSENHSKVNSVE--ESKTPNSLKPKNDTQF 614
             L +EE +R+++   S      S  N V   ++K+    K +  T F
Sbjct: 180  SLDVEEKAREKDAA-SKGDGGQSSANVVHKAQNKSKGKYKAQQTTNF 225


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  256 bits (654), Expect = 3e-65
 Identities = 119/185 (64%), Positives = 148/185 (80%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            L++LA+ H L+VHQMDVKTAFLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 887  LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQA 946

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFDK + S GF VN+ADKC+Y +H     VILCLYVDD+LIFG++I V+ E K 
Sbjct: 947  PKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKS 1006

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
            FLS NFDMKDLG ADVIL IK++R  + + L QSHY+EK L ++G+ D  P+PTP D ++
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066

Query: 22   KLMKN 8
             L KN
Sbjct: 1067 SLRKN 1071



 Score =  107 bits (266), Expect = 3e-20
 Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
 Frame = -2

Query: 1288 RLERFDGEGFTRWQETVKFFLITIKLWYILEDGLEEIPAATDNDTEELKARRKQRQEDDF 1109
            R ++F G  F RWQ  V  +L  +K +++     E +  A          ++KQ +E   
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE---------QQKQFEEATT 59

Query: 1108 MCRGHILNALDKHVYNAHRSIGTAKGLWTALDNKYKISEASNKKFLICNFMDFKMVDSKS 929
            +  G IL+ L   +   +  +  AK LW AL+ K+  ++ASN  +++  F D+KM D++S
Sbjct: 60   LFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRS 119

Query: 928  IIAQVSELLLIVNQLKDAGIDLVSAFVVGVIISRLPPSWNGYKKKLKHAETDYDLEALQR 749
            ++ Q  E+  +  +L+     L   FV G II++LPPSW  +   LKH   +Y +E L  
Sbjct: 120  VVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIA 179

Query: 748  HLRIEEDSRKRELKDSPHSENHSKVNSVE--ESKTPNSLKPKNDTQF 614
             L +EE +R+++   S      S  N V   ++K+    K +  T F
Sbjct: 180  SLDVEEKAREKDAA-SKGDGGQSSANVVHKAQNKSKGKYKAQQTTNF 225


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  256 bits (653), Expect = 4e-65
 Identities = 118/185 (63%), Positives = 149/185 (80%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            L++LA+ H L+VHQMDVKTAFLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 887  LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 946

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFDK ++S GF VN+ADKC+Y +H     VILCLYVDD+LIFG+++ V+ E K 
Sbjct: 947  PKQWHEKFDKTLISAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1006

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
            FLS NFDMKDLG ADVIL IK++R  + + L QSHY+EK L ++G+ D  P+PTP D ++
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066

Query: 22   KLMKN 8
             L KN
Sbjct: 1067 LLRKN 1071



 Score =  107 bits (266), Expect = 3e-20
 Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
 Frame = -2

Query: 1288 RLERFDGEGFTRWQETVKFFLITIKLWYILEDGLEEIPAATDNDTEELKARRKQRQEDDF 1109
            R ++F G  F RWQ  V  +L  +K +++     E +  A          ++KQ +E   
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE---------QQKQFEEATT 59

Query: 1108 MCRGHILNALDKHVYNAHRSIGTAKGLWTALDNKYKISEASNKKFLICNFMDFKMVDSKS 929
            +  G IL+ L   +   +  +  AK LW AL+ K+  ++ASN  +++  F D+KM D++S
Sbjct: 60   LFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRS 119

Query: 928  IIAQVSELLLIVNQLKDAGIDLVSAFVVGVIISRLPPSWNGYKKKLKHAETDYDLEALQR 749
            ++ Q  E+  +  +L+     L   FV G II++LPPSW  +   LKH   +Y +E L  
Sbjct: 120  VVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIA 179

Query: 748  HLRIEEDSRKRELKDSPHSENHSKVNSVE--ESKTPNSLKPKNDTQF 614
             L +EE +R+++   S      S  N V   ++K+    K +  T F
Sbjct: 180  SLDVEEKAREKDAA-SKGDGGQSSANVVHKAQNKSKGKYKAQQTTNF 225


>emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]
          Length = 478

 Score =  256 bits (653), Expect = 4e-65
 Identities = 118/185 (63%), Positives = 147/185 (79%)
 Frame = -2

Query: 562 LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
           L++LA  H L VHQMDVKT FLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 74  LLSLAGSHGLFVHQMDVKTVFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 133

Query: 382 PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
           P QWHEKFDK + S GF VN+ADKC+Y +HD    VILCLYVDD+LIFG+++ V+ E K 
Sbjct: 134 PKQWHEKFDKTLTSAGFAVNEADKCVYYRHDGGEGVILCLYVDDILIFGTNLEVINEVKS 193

Query: 202 FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
           FLS NFDMKDLG ADVIL IK++R  + + L QSHY+EK L ++G+ D  P+PTP D ++
Sbjct: 194 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 253

Query: 22  KLMKN 8
            L+KN
Sbjct: 254 LLLKN 258


>gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711758|gb|ABF99553.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1224

 Score =  255 bits (652), Expect = 6e-65
 Identities = 118/185 (63%), Positives = 149/185 (80%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            L++LA+ H L+VHQMDVKTAFLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 809  LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 868

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFDK++ S GF VN+ADKC+Y +H     VILCLYVDD+LIFG+++ V+ E K 
Sbjct: 869  PKQWHEKFDKILTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 928

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
            FLS NFDMKDLG ADVIL IK++R  + + L QSHY+EK L ++G+ D  P+PTP D ++
Sbjct: 929  FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 988

Query: 22   KLMKN 8
             L KN
Sbjct: 989  LLHKN 993



 Score =  105 bits (262), Expect = 1e-19
 Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
 Frame = -2

Query: 1288 RLERFDGEGFTRWQETVKFFLITIKLWYILEDGLEEIPAATDNDTEELKARRKQRQEDDF 1109
            R ++F G  F RWQ  V  +L  +K +++     + +  A          ++KQ +E   
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPKGVLTAE---------QQKQFEEATT 59

Query: 1108 MCRGHILNALDKHVYNAHRSIGTAKGLWTALDNKYKISEASNKKFLICNFMDFKMVDSKS 929
            +  G IL+ L   +   +  +  AK LW AL+ K+  ++ASN  +++  F D+KM D++S
Sbjct: 60   LFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRS 119

Query: 928  IIAQVSELLLIVNQLKDAGIDLVSAFVVGVIISRLPPSWNGYKKKLKHAETDYDLEALQR 749
            ++ Q  E+  +  +L+     L   FV G II++LPPSW  +   LKH   +Y +E L  
Sbjct: 120  VVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIA 179

Query: 748  HLRIEEDSRKRELKDSPHSENHSKVNSVE--ESKTPNSLKPKNDTQF 614
             L +EE +R+++   S      S  N V   ++K+    K +  T F
Sbjct: 180  SLDVEEKAREKDAA-SKGDGGQSSANVVHKAQNKSKGKYKAQQTTNF 225


>gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 713

 Score =  255 bits (652), Expect = 6e-65
 Identities = 118/185 (63%), Positives = 149/185 (80%)
 Frame = -2

Query: 562 LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
           L++LA+ H L+VHQMDVKTAFLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 280 LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 339

Query: 382 PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
           P QWHEKFDK + S GF+VN+ADKC+Y +H     VILCLYVDD+LIFG+++ V+ E K 
Sbjct: 340 PKQWHEKFDKTLTSAGFVVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 399

Query: 202 FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
           FLS NFDMKDLG ADVIL IK++R  + + L QSHY+EK L ++G+ D  P+PTP D ++
Sbjct: 400 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 459

Query: 22  KLMKN 8
            L KN
Sbjct: 460 LLRKN 464


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  255 bits (652), Expect = 6e-65
 Identities = 121/187 (64%), Positives = 148/187 (79%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            ++A+A++  L +HQMDVKTAFLNGDL+EEIYMEQPEGF +PGQEKKVCKLVKSLYGLKQA
Sbjct: 861  VLAIAALRNLEIHQMDVKTAFLNGDLDEEIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQA 920

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFD V+LS+GF +N+ DKC+Y K    G VI+CLYVDDMLI GSD  ++  TK 
Sbjct: 921  PKQWHEKFDNVMLSHGFKINECDKCVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKN 980

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
             L+S FDMKD+G ADVILGIKI R  +EL+L+QSHY++K L K+   +   A TP+D T+
Sbjct: 981  MLNSRFDMKDMGLADVILGIKIKRTSBELILSQSHYVDKILGKFDKDNSGVARTPVDVTL 1040

Query: 22   KLMKNTG 2
             L KN G
Sbjct: 1041 HLSKNKG 1047



 Score =  154 bits (388), Expect = 2e-34
 Identities = 80/219 (36%), Positives = 128/219 (58%)
 Frame = -2

Query: 1282 ERFDGEGFTRWQETVKFFLITIKLWYILEDGLEEIPAATDNDTEELKARRKQRQEDDFMC 1103
            E+F G  F RWQ+ + F+L T+ L   L +   ++    ++D + + A    +  D F+C
Sbjct: 42   EKFSGLNFKRWQQKMLFYLTTLNLARFLTEDAPKLKE-DEHDIQVISAIDAWKHSD-FLC 99

Query: 1102 RGHILNALDKHVYNAHRSIGTAKGLWTALDNKYKISEASNKKFLICNFMDFKMVDSKSII 923
            R +++N L   +YN +    TAK LW +LD KYK  +A  KKF++  F+D+KMVDSK+++
Sbjct: 100  RNYVMNGLTDSLYNVYSDKKTAKELWESLDRKYKTEDAGAKKFVVGRFLDYKMVDSKTVV 159

Query: 922  AQVSELLLIVNQLKDAGIDLVSAFVVGVIISRLPPSWNGYKKKLKHAETDYDLEALQRHL 743
            +QV EL +I++++   G+ L   F V  II +LPP+W  +K  LKH   +  +E L   L
Sbjct: 160  SQVQELQVILHEIHADGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKEMSIEDLIIRL 219

Query: 742  RIEEDSRKRELKDSPHSENHSKVNSVEESKTPNSLKPKN 626
            RIEED+R+ E K   H+ N ++ N VE  ++  +    N
Sbjct: 220  RIEEDNRRSE-KKGAHTLNEAQANFVEHGQSSKAKTNNN 257


>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1460

 Score =  255 bits (652), Expect = 6e-65
 Identities = 118/185 (63%), Positives = 148/185 (80%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            L++LA+ H L+VHQMDVKTAFLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 887  LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQA 946

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFDK + S GF VN+ADKC+Y +H     VILCLYVDD+LIFG+++ V+ E K 
Sbjct: 947  PKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1006

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
            FLS NFDMKDLG ADVIL IK++R  + + L QSHY+EK L ++G+ D  P+PTP D ++
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066

Query: 22   KLMKN 8
             L KN
Sbjct: 1067 SLRKN 1071



 Score =  107 bits (266), Expect = 3e-20
 Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
 Frame = -2

Query: 1288 RLERFDGEGFTRWQETVKFFLITIKLWYILEDGLEEIPAATDNDTEELKARRKQRQEDDF 1109
            R ++F G  F RWQ  V  +L  +K +++     E +  A          ++KQ +E   
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE---------QQKQFEEATT 59

Query: 1108 MCRGHILNALDKHVYNAHRSIGTAKGLWTALDNKYKISEASNKKFLICNFMDFKMVDSKS 929
            +  G IL+ L   +   +  +  AK LW AL+ K+  ++ASN  +++  F D+KM D++S
Sbjct: 60   LFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRS 119

Query: 928  IIAQVSELLLIVNQLKDAGIDLVSAFVVGVIISRLPPSWNGYKKKLKHAETDYDLEALQR 749
            ++ Q  E+  +  +L+     L   FV G II++LPPSW  +   LKH   +Y +E L  
Sbjct: 120  VVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIA 179

Query: 748  HLRIEEDSRKRELKDSPHSENHSKVNSVE--ESKTPNSLKPKNDTQF 614
             L +EE +R+++   S      S  N V   ++K+    K +  T F
Sbjct: 180  SLDVEEKAREKDAA-SKGDGGQSSANVVHKAQNKSKGKYKAQQTTNF 225


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  255 bits (652), Expect = 6e-65
 Identities = 118/185 (63%), Positives = 148/185 (80%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            L++LA+ H L+VHQMDVKTAFLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 887  LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQA 946

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFDK + S GF VN+ADKC+Y +H     VILCLYVDD+LIFG+++ V+ E K 
Sbjct: 947  PKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1006

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
            FLS NFDMKDLG ADVIL IK++R  + + L QSHY+EK L ++G+ D  P+PTP D ++
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066

Query: 22   KLMKN 8
             L KN
Sbjct: 1067 SLRKN 1071



 Score =  107 bits (266), Expect = 3e-20
 Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
 Frame = -2

Query: 1288 RLERFDGEGFTRWQETVKFFLITIKLWYILEDGLEEIPAATDNDTEELKARRKQRQEDDF 1109
            R ++F G  F RWQ  V  +L  +K +++     E +  A          ++KQ +E   
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE---------QQKQFEEATT 59

Query: 1108 MCRGHILNALDKHVYNAHRSIGTAKGLWTALDNKYKISEASNKKFLICNFMDFKMVDSKS 929
            +  G IL+ L   +   +  +  AK LW AL+ K+  ++ASN  +++  F D+KM D++S
Sbjct: 60   LFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRS 119

Query: 928  IIAQVSELLLIVNQLKDAGIDLVSAFVVGVIISRLPPSWNGYKKKLKHAETDYDLEALQR 749
            ++ Q  E+  +  +L+     L   FV G II++LPPSW  +   LKH   +Y +E L  
Sbjct: 120  VVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIA 179

Query: 748  HLRIEEDSRKRELKDSPHSENHSKVNSVE--ESKTPNSLKPKNDTQF 614
             L +EE +R+++   S      S  N V   ++K+    K +  T F
Sbjct: 180  SLDVEEKAREKDAA-SKGDGGQSSANVVHKAQNKSKGKYKAQQTTNF 225


>gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53749238|gb|AAU90098.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  255 bits (651), Expect = 7e-65
 Identities = 118/185 (63%), Positives = 148/185 (80%)
 Frame = -2

Query: 562  LIALASIHKLVVHQMDVKTAFLNGDLEEEIYMEQPEGFISPGQEKKVCKLVKSLYGLKQA 383
            L++LA+ H L+VHQMDVKTAFLNG+L+EEIYM+QP+GF+  GQE KVCKL+KSLYGLKQA
Sbjct: 887  LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQECKVCKLLKSLYGLKQA 946

Query: 382  PMQWHEKFDKVVLSYGFMVNDADKCIYSKHDSSGCVILCLYVDDMLIFGSDISVVEETKK 203
            P QWHEKFDK + S GF VN+ADKC+Y +H     VILCLYVDD+LIFG+++ V+ E K 
Sbjct: 947  PKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1006

Query: 202  FLSSNFDMKDLGEADVILGIKILRKGDELVLTQSHYIEKFLKKYGHFDDNPAPTPLDHTI 23
            FLS NFDMKDLG ADVIL IK++R  + + L QSHY+EK L ++G+ D  P+PTP D ++
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066

Query: 22   KLMKN 8
             L KN
Sbjct: 1067 SLRKN 1071



 Score =  107 bits (266), Expect = 3e-20
 Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
 Frame = -2

Query: 1288 RLERFDGEGFTRWQETVKFFLITIKLWYILEDGLEEIPAATDNDTEELKARRKQRQEDDF 1109
            R ++F G  F RWQ  V  +L  +K +++     E +  A          ++KQ +E   
Sbjct: 9    RPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAE---------QQKQFEEATT 59

Query: 1108 MCRGHILNALDKHVYNAHRSIGTAKGLWTALDNKYKISEASNKKFLICNFMDFKMVDSKS 929
            +  G IL+ L   +   +  +  AK LW AL+ K+  ++ASN  +++  F D+KM D++S
Sbjct: 60   LFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRS 119

Query: 928  IIAQVSELLLIVNQLKDAGIDLVSAFVVGVIISRLPPSWNGYKKKLKHAETDYDLEALQR 749
            ++ Q  E+  +  +L+     L   FV G II++LPPSW  +   LKH   +Y +E L  
Sbjct: 120  VVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIA 179

Query: 748  HLRIEEDSRKRELKDSPHSENHSKVNSVE--ESKTPNSLKPKNDTQF 614
             L +EE +R+++   S      S  N V   ++K+    K +  T F
Sbjct: 180  SLDVEEKAREKDAA-SKGDGGQSSANVVHKAQNKSKGKYKAQQTTNF 225