BLASTX nr result

ID: Papaver29_contig00027579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00027579
         (886 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012465796.1| PREDICTED: F-box protein At5g07610-like [Gos...    59   2e-07
ref|XP_009771002.1| PREDICTED: F-box protein At5g07610-like [Nic...    60   2e-06

>ref|XP_012465796.1| PREDICTED: F-box protein At5g07610-like [Gossypium raimondii]
           gi|763813901|gb|KJB80753.1| hypothetical protein
           B456_013G114100 [Gossypium raimondii]
          Length = 397

 Score = 58.5 bits (140), Expect(2) = 2e-07
 Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
 Frame = -2

Query: 390 IKDSCNGLLLCMDMTEKTKILVVCNLSTGQHREI-APPKYRKKKDXXXXXXLVFNPLKSL 214
           I  SCNGLLLC    +     ++CN +T + R I  P                F+PL S 
Sbjct: 109 ILQSCNGLLLCESYRQS---YLICNPTTKKFRRIYCPSNSAYNFISKCFVSFAFDPLTSP 165

Query: 213 DYEIVCIW-----GCKF--EIYSSKTRSWRLC 139
           DY I+CIW      CKF  ++YSSKT SW LC
Sbjct: 166 DYRIICIWESYREPCKFNLDLYSSKTGSWDLC 197



 Score = 24.6 bits (52), Expect(2) = 2e-07
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 83  NGCLNWFNCNNRDLVYFDIEQQVLKTL 3
           NG ++W       L YFD+E++ L+T+
Sbjct: 219 NGRIHWCGYGEESL-YFDVEKECLETM 244


>ref|XP_009771002.1| PREDICTED: F-box protein At5g07610-like [Nicotiana sylvestris]
          Length = 445

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
 Frame = -2

Query: 384 DSCNGLLLCMD--MTEKTKILVVCNLSTGQHREIAPPKYRKKKDXXXXXXLVFNPLKSLD 211
           +SCNGL  C+D  +++  +   + NL TG++R I  P+   + D      L F+P KS D
Sbjct: 157 NSCNGLF-CLDFKLSDGRREFYIYNLITGENRFIPLPETINEPDLVRTMNLAFDPEKSGD 215

Query: 210 YEIVCIW------GCKFEIYSSKTRSWRLCDRFYYMGSY 112
           Y++VC+W        +F +YSS T +WR  + +Y    Y
Sbjct: 216 YDVVCVWLSVSENQLRFSVYSSGTGNWRHSNEYYDCNEY 254


Top