BLASTX nr result
ID: Papaver29_contig00027238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00027238
(2462 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 143 2e-87
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 143 7e-87
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 139 3e-86
gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas] 135 4e-76
ref|XP_009375083.1| PREDICTED: uncharacterized protein LOC103963... 131 2e-66
ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein A... 114 1e-65
ref|XP_008382787.1| PREDICTED: putative ribonuclease H protein A... 132 7e-64
ref|XP_009116295.1| PREDICTED: putative ribonuclease H protein A... 117 4e-63
ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936... 111 3e-62
ref|XP_009151561.1| PREDICTED: putative ribonuclease H protein A... 101 7e-59
ref|XP_008364703.1| PREDICTED: putative ribonuclease H protein A... 120 7e-59
ref|XP_008346916.1| PREDICTED: putative ribonuclease H protein A... 121 3e-58
ref|XP_009140270.1| PREDICTED: putative ribonuclease H protein A... 124 6e-58
ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844... 93 9e-58
ref|XP_010693635.1| PREDICTED: uncharacterized protein LOC104906... 119 8e-56
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 102 1e-55
ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prun... 119 2e-55
ref|XP_013651180.1| PREDICTED: uncharacterized protein LOC106355... 104 3e-55
ref|XP_013601015.1| PREDICTED: uncharacterized protein LOC106308... 103 4e-55
ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein A... 115 3e-54
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 143 bits (360), Expect(4) = 2e-87
Identities = 77/228 (33%), Positives = 132/228 (57%), Gaps = 3/228 (1%)
Frame = -2
Query: 2113 FLVGGDKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNL 1934
FL G D + + ++ V W ++C+P + GGLG+R N A L KMAW+I+ N D +
Sbjct: 829 FLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKV 888
Query: 1933 LKEKYYSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWMSNLP 1754
L+EKY ++ ++ S WRSI+KG+D + +I+W++ +GR ++ WND W+ + P
Sbjct: 889 LREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGP 948
Query: 1753 LSVIAEASNQ-NVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKA--ISIGSDKCED 1583
L+ + NQ ++ D+ V+D+I R WD A+ + + + ++A I+I S++ ED
Sbjct: 949 LASNTDCINQPHMTDIKVEDLIT-SQRRWDTGALHNILPTNMIDMVRATPIAINSEQ-ED 1006
Query: 1582 QVVWSHSKNGDIIVRDAYNFLISNKIGNILPDHNWRFLWKLNCPQKIK 1439
+ W HS G + V AY+ LI+ G+ D + ++W+ C +KIK
Sbjct: 1007 FLSWPHSTTGMVTVSSAYS-LIAGHDGD---DRSHDWIWRATCTEKIK 1050
Score = 84.7 bits (208), Expect(4) = 2e-87
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Frame = -1
Query: 1442 QIFLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWI 1263
++F+W NGL +N R+ +++ C +C E ET +HLF C W+ +
Sbjct: 1050 KLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACWDSAVPPL 1109
Query: 1262 GFQPNLDYINPSTLKYFCRFKGKIG-GVNWVNIFPFILWSIWNGRNEWVFNKRVFLPSHV 1086
FQ + S +K C + K G G NW IFP+ILW++W RN VF+ + PS +
Sbjct: 1110 TFQTSNHLHMHSWMKAACSSQQKDGYGTNWSLIFPYILWNLWKARNRLVFDNNITAPSDI 1169
Query: 1085 LARALRSARE 1056
L R+ + E
Sbjct: 1170 LNRSFMESSE 1179
Score = 84.3 bits (207), Expect(4) = 2e-87
Identities = 41/119 (34%), Positives = 68/119 (57%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SG ++ +KS L S+N+ + + L+V VA+ G YLGIP+ R+ NT+ +
Sbjct: 714 SGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVI 773
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWG 2101
+K+ ++ W + +LN AGR L++ L V + M ++ LP S +ID+ +NFLWG
Sbjct: 774 DKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWG 832
Score = 84.0 bits (206), Expect(4) = 2e-87
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Frame = -3
Query: 984 PRHGFSKIKCDGASNNVKD-AEIGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P GF+K+ DGA + A GG++R +NG + A +I ++ +AE+W +REGLL
Sbjct: 1203 PAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYICNIGTANSFLAELWGLREGLL 1262
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYREAN 628
L KN G KL ETDS VQ+ +++ L+KD + L+ F +I + RE N
Sbjct: 1263 LAKNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGN 1322
Query: 627 GVADYLAKSSVAKEIEGEWITSPPTSILRLLSNDLVGRAVVR 502
AD+LA + + PP + L D +G A R
Sbjct: 1323 QCADFLANLGQSSSWGTTILERPPDDLRIFLQRDAIGLASSR 1364
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 143 bits (360), Expect(4) = 7e-87
Identities = 77/228 (33%), Positives = 132/228 (57%), Gaps = 3/228 (1%)
Frame = -2
Query: 2113 FLVGGDKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNL 1934
FL G D + + ++ V W ++C+P + GGLG+R N A L KMAW+I+ N D +
Sbjct: 829 FLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKV 888
Query: 1933 LKEKYYSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWMSNLP 1754
L+EKY ++ ++ S WRSI+KG+D + +I+W++ +GR ++ WND W+ + P
Sbjct: 889 LREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGP 948
Query: 1753 LSVIAEASNQ-NVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKA--ISIGSDKCED 1583
L+ + NQ ++ D+ V+D+I R WD A+ + + + ++A I+I S++ ED
Sbjct: 949 LASNTDCINQPHMTDIKVEDLIT-SQRRWDTGALHNILPTNMIDMVRATPIAINSEQ-ED 1006
Query: 1582 QVVWSHSKNGDIIVRDAYNFLISNKIGNILPDHNWRFLWKLNCPQKIK 1439
+ W HS G + V AY+ LI+ G+ D + ++W+ C +KIK
Sbjct: 1007 FLSWPHSTTGMVTVSSAYS-LIAGHDGD---DRSHDWIWRATCTEKIK 1050
Score = 84.3 bits (207), Expect(4) = 7e-87
Identities = 41/119 (34%), Positives = 68/119 (57%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SG ++ +KS L S+N+ + + L+V VA+ G YLGIP+ R+ NT+ +
Sbjct: 714 SGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVI 773
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWG 2101
+K+ ++ W + +LN AGR L++ L V + M ++ LP S +ID+ +NFLWG
Sbjct: 774 DKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWG 832
Score = 84.3 bits (207), Expect(4) = 7e-87
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Frame = -3
Query: 984 PRHGFSKIKCDGASNNVKD-AEIGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P GF+K+ DGA + A GG++R +NG + A +I ++ +AE+W +REGLL
Sbjct: 1203 PAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLL 1262
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYREAN 628
L KN G KL ETDS VQ+ +++ L+KD + L+ F +I + RE N
Sbjct: 1263 LAKNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGN 1322
Query: 627 GVADYLAKSSVAKEIEGEWITSPPTSILRLLSNDLVGRAVVR 502
AD+LA + + PP + L D +G A R
Sbjct: 1323 QCADFLANLGQSSSWGTTILERPPDDLRIFLQRDAIGLASSR 1364
Score = 82.4 bits (202), Expect(4) = 7e-87
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Frame = -1
Query: 1442 QIFLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWI 1263
++F+W NGL +N R+ +++ C +C E ET +HLF C W+ +
Sbjct: 1050 KLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACWDSAVPPL 1109
Query: 1262 GFQPNLDYINPSTLKYFCRFKGKIG-GVNWVNIFPFILWSIWNGRNEWVFNKRVFLPSHV 1086
FQ + S +K C + K G NW IFP+ILW++W RN VF+ + PS +
Sbjct: 1110 TFQTSNHLHMHSWMKAACSSQQKDGYSTNWSLIFPYILWNLWKARNRLVFDNNITAPSDI 1169
Query: 1085 LARALRSARE 1056
L R+ + E
Sbjct: 1170 LNRSFMESSE 1179
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 139 bits (349), Expect(4) = 3e-86
Identities = 77/228 (33%), Positives = 130/228 (57%), Gaps = 3/228 (1%)
Frame = -2
Query: 2113 FLVGGDKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNL 1934
FL G D + + ++ V W ++C+P + GGLG+R N A L KMAW+I+ N D +
Sbjct: 1361 FLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKV 1420
Query: 1933 LKEKYYSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWMSNLP 1754
L+EKY ++ ++ S WRSI+KG+D + +I+W++ +GR ++ WND W+ + P
Sbjct: 1421 LREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGP 1480
Query: 1753 LSVIAEASNQ-NVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKA--ISIGSDKCED 1583
L+ + NQ ++ D+ V+D+ R WD A+ + + + ++A I+I S++ ED
Sbjct: 1481 LASNTDCINQPHMTDIKVEDLTT-SQRRWDTGALHNILPINMIDMVRATPIAINSEQ-ED 1538
Query: 1582 QVVWSHSKNGDIIVRDAYNFLISNKIGNILPDHNWRFLWKLNCPQKIK 1439
W HS G + V AY+ LI+ G+ H+W +W+ C +KIK
Sbjct: 1539 FPSWPHSTTGMVTVSSAYS-LIAGHDGD-GRSHDW--IWRATCTEKIK 1582
Score = 84.7 bits (208), Expect(4) = 3e-86
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Frame = -1
Query: 1442 QIFLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWI 1263
++F+W NGL +N R+ +++ C +C E ET +HLF C W+ +
Sbjct: 1582 KLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACWDSAVPPL 1641
Query: 1262 GFQPNLDYINPSTLKYFCRFKGKIG-GVNWVNIFPFILWSIWNGRNEWVFNKRVFLPSHV 1086
FQ + S +K C + K G G NW IFP+ILW++W RN VF+ + PS +
Sbjct: 1642 TFQTSNHLHMHSWMKAACSSQQKDGYGTNWSLIFPYILWNLWKARNRLVFDNNITAPSDI 1701
Query: 1085 LARALRSARE 1056
L R+ + E
Sbjct: 1702 LNRSFMESSE 1711
Score = 84.3 bits (207), Expect(4) = 3e-86
Identities = 41/119 (34%), Positives = 68/119 (57%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SG ++ +KS L S+N+ + + L+V VA+ G YLGIP+ R+ NT+ +
Sbjct: 1246 SGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVI 1305
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWG 2101
+K+ ++ W + +LN AGR L++ L V + M ++ LP S +ID+ +NFLWG
Sbjct: 1306 DKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWG 1364
Score = 84.3 bits (207), Expect(4) = 3e-86
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Frame = -3
Query: 984 PRHGFSKIKCDGASNNVKD-AEIGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P GF+K+ DGA + A GG++R +NG + A +I ++ +AE+W +REGLL
Sbjct: 1735 PAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLL 1794
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYREAN 628
L KN G KL ETDS VQ+ +++ L+KD + L+ F +I + RE N
Sbjct: 1795 LAKNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGN 1854
Query: 627 GVADYLAKSSVAKEIEGEWITSPPTSILRLLSNDLVGRAVVR 502
AD+LA + + PP + L D +G A R
Sbjct: 1855 QCADFLANLGQSSSWGTTILERPPDDLRIFLQRDAIGLASSR 1896
>gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas]
Length = 1836
Score = 135 bits (339), Expect(4) = 4e-76
Identities = 71/228 (31%), Positives = 119/228 (52%), Gaps = 3/228 (1%)
Frame = -2
Query: 2113 FLVGGDKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNL 1934
FL G + K I+ V W +CRP GGLG+R N+A L KMAW+I+ N D +
Sbjct: 1299 FLWGHTDNTKKIHTVNWSHICRPRQMGGLGLRTARDFNMAFLTKMAWQIFTNQDRLWVKV 1358
Query: 1933 LKEKYYSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWMSNLP 1754
L+EKY + + + S WR ILKGR+ + ++W + DG ++ W+D W P
Sbjct: 1359 LREKYVKQDDFLHIPQCSNASWGWRGILKGRNILAKGLKWCVGDGTAINFWHDWWTGKKP 1418
Query: 1753 LSVIAEA--SNQNVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISI-GSDKCED 1583
L + Q+ P + I N R WD+ A+ + +I+A+ + +++ D
Sbjct: 1419 LITATNTHDAGQHEPTTVSAFIDN--QRNWDIQALSNLLPPSTINDIRAVPLPAANQQVD 1476
Query: 1582 QVVWSHSKNGDIIVRDAYNFLISNKIGNILPDHNWRFLWKLNCPQKIK 1439
++ W HS +G + V A++F+ G+ D+++ ++WKL C +K+K
Sbjct: 1477 KLTWPHSNSGLVSVSSAFSFI----SGHDDSDNSYAWIWKLPCVEKVK 1520
Score = 80.5 bits (197), Expect(4) = 4e-76
Identities = 40/119 (33%), Positives = 64/119 (53%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SG ++ +KST+ S NL K + + + + + G YLGIP+ R+ +T+ +
Sbjct: 1184 SGLQVNLSKSTIFCSPNLHAGLRKQIGDKMNIPTSDNLGTYLGIPMLQKRVSRHTFSSVV 1243
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWG 2101
EK+ ++ W + TLN AGR L++ L V + M L LP S +D+ +NFLWG
Sbjct: 1244 EKMRKKLATWKASTLNMAGRRILVQSSLASVPTYTMQALALPVSTCNDVDKICRNFLWG 1302
Score = 75.9 bits (185), Expect(4) = 4e-76
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Frame = -3
Query: 984 PRHGFSKIKCDGASN-NVKDAEIGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P+ GF K+ DGA N A GG++R G + + +I ++ +AE+W REGL+
Sbjct: 1673 PQPGFVKMNSDGAMKANSGMASAGGLLRDHMGNWIVGFSTNIGHTNSFLAELWGFREGLV 1732
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYREAN 628
+ KN G + ETDS VQ+ + + +L+ D + L+ F + I +RE N
Sbjct: 1733 IAKNRGYNHIIAETDSEAVVQVLINDRAVGPFDFTLLADCKSLIHQFQECRIMHTFREGN 1792
Query: 627 GVADYLAKSSVAKEIEGEWITSPPTSILRLLSNDLVG 517
AD+LA + W PP + LL+ D G
Sbjct: 1793 QCADHLANIGQSITSGTTWWDHPPAELTELLNRDAWG 1829
Score = 66.6 bits (161), Expect(4) = 4e-76
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Frame = -1
Query: 1442 QIFLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWI 1263
++F+W NGL N R+ + C C ET +HLF C WE
Sbjct: 1520 KLFIWKIMENGLLTNSERRRRGLLEAATCPSCGTNDETIDHLFRSCDVAVNCWEAAAPPT 1579
Query: 1262 GFQPNLDYINPSTLKYFCRFKGKIG-GVNWVNIFPFILWSIWNGRNEWVFNKRVFLPSHV 1086
F + ++ C G G++W IFP+ILW++W GRN VFN + +
Sbjct: 1580 AFMYSFHLPVTVWMEKSCASNQTNGRGISWRLIFPYILWNMWKGRNNQVFNNVCTNGNAI 1639
Query: 1085 LARALRSAREFLNARGNLEHE-MCRTEDIVVPW 990
+ A + A E R L H R + +PW
Sbjct: 1640 VKIAEQEASE--AQRFLLPHAGPLRARQLWIPW 1670
>ref|XP_009375083.1| PREDICTED: uncharacterized protein LOC103963932 [Pyrus x
bretschneideri]
Length = 1815
Score = 131 bits (330), Expect(4) = 2e-66
Identities = 73/230 (31%), Positives = 113/230 (49%), Gaps = 13/230 (5%)
Frame = -2
Query: 2089 KKSINKVGWEK---VCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNLLKEKY 1919
K+ +K+ W + P D GGLG R+ + N ALL K WR+ PDS ++K +Y
Sbjct: 1268 KEGAHKIHWVSKGVLGLPKDMGGLGFRNFQEFNEALLAKQCWRLITEPDSLWAKVIKARY 1327
Query: 1918 YSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWMSNLPLSVIA 1739
+ +S+IW K R S +W S++ GR V+ W I G+ V VW D W+ +LPL
Sbjct: 1328 FPHSSIWDAKKGGRASWAWSSLICGRGLVREGSHWQILGGQEVRVWQDRWLPSLPLGHPE 1387
Query: 1738 EASNQNV-PDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISIGSDKCEDQVVWSHS 1562
V P L V +I +S W++ + FISE + I+ +G +D+++W S
Sbjct: 1388 PVGQVAVTPSLRVSALICPESGRWNINFLQPFISEEAMQAIEETPLGDLSRKDRLIWDTS 1447
Query: 1561 KNGDIIVRDAYNFLISNKIGNI---------LPDHNWRFLWKLNCPQKIK 1439
KNG V+ Y +L + +P W+ +WKL P K++
Sbjct: 1448 KNGAYSVKSGYRWLQGRSLVRRDLRRPSVRGVPKAFWKGIWKLEVPPKLR 1497
Score = 77.8 bits (190), Expect(4) = 2e-66
Identities = 38/119 (31%), Positives = 65/119 (54%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ ++ KS++ AN+ + + M AL ++V +PG YLG+P WGR ++
Sbjct: 1148 SGQKVNLEKSSVFFGANVPKVNVEQMGNALGMKVVINPGTYLGVPTIWGRSKKRGLAYVK 1207
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWG 2101
++ ++QGW TL+ AG+ LIK V+ + + M + K P ++ ++D F WG
Sbjct: 1208 GRVMEKLQGWKQNTLSRAGKEVLIKAVIQAIPAYPMCIFKFPGAVCKELDALVAGFWWG 1266
Score = 61.6 bits (148), Expect(4) = 2e-66
Identities = 44/149 (29%), Positives = 60/149 (40%), Gaps = 17/149 (11%)
Frame = -1
Query: 1436 FLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLW--------- 1284
FLWL HN L ++L+R+ S C +C ET H+F C V P+W
Sbjct: 1499 FLWLTVHNCLPTRDALFRRRSSQTSTCPICCCHDETIEHIFLSCSWVEPIWFGGALGYKM 1558
Query: 1283 -----EKIKDWIG--FQPNLDYINPSTLKYFCRFKGKIGGVNW-VNIFPFILWSIWNGRN 1128
DWI F PNL C G + W + F W IW R
Sbjct: 1559 DRPSLPSWSDWIQGVFSPNL-----------C----NSGDIMWRQSYIVFTCWCIWKARC 1603
Query: 1127 EWVFNKRVFLPSHVLARALRSAREFLNAR 1041
++VF + P VLA + R F++A+
Sbjct: 1604 DFVFKEVPINPLKVLAAISEAVRSFISAK 1632
Score = 54.7 bits (130), Expect(4) = 2e-66
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Frame = -3
Query: 1041 GKPGA*NVQN*RHCCSMDFPRHGFSKIKCDGA-SNNVKDAEIGGIIRVDNGGFQACLARH 865
G G N Q R C P + F KI D + S K +G I+R F A
Sbjct: 1640 GGEGRRNSQVTRWCA----PTYPFVKINVDASWSKASKMGFVGVIVRDMESKFVAAARHP 1695
Query: 864 IYKNDNNVAEVWEIREGLLLEKNIGIKKLEVETDSTYAVQLCKRETST-PWVMRSLIKDI 688
I AE + + G L +G++ + +E+DS A++ S W ++ +
Sbjct: 1696 INAPSAAAAEAYALLHGCRLGAELGVRYVILESDSLDAIKCLSSSLSMGSWEAYPVLARV 1755
Query: 687 EELMLSFDDIVIGQRYREANGVADYLAKSSVAKEIEGEWITSPPTSILRLLSND 526
++L F D R ANGVA +A ++ + W+ PP+S++ +L+ND
Sbjct: 1756 KQLGGDFIDCRWSWVPRSANGVAHKIASIGFSEMSDIVWVVRPPSSLVYVLNND 1809
>ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 1011
Score = 114 bits (285), Expect(4) = 1e-65
Identities = 62/216 (28%), Positives = 116/216 (53%), Gaps = 5/216 (2%)
Frame = -2
Query: 2071 VGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNLLKEKYY--SYSNIW 1898
V WEK+C+P GGLG+R N AL+ K+ WR+ + +S +L+ KY S ++
Sbjct: 478 VSWEKICKPKAEGGLGIRGSRDMNKALIAKVGWRLLRDTESLWARVLRSKYNVGSIHDLS 537
Query: 1897 TCGKKNRTSVSWRSILKG-RDTVKSSIRWSIRDGRNVSVWNDPWMSNLPLSVIAEAS-NQ 1724
G+++ S +W S++ G R+ V + W+I +GR++ W D W+SN PLS + +
Sbjct: 538 WTGRRSNGSSTWSSVVLGIREVVMTGHSWAIGNGRDIKFWTDRWLSNQPLSSVTIGELPE 597
Query: 1723 NVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISIGS-DKCEDQVVWSHSKNGDI 1547
D+ V+++ WDL I F+++ E+ A+ + + + ED++ WS + NG
Sbjct: 598 GYEDVTVREMWVVGG-GWDLAHIAPFVTDETRLELAAVVVDTVNDSEDRLAWSQTNNGQF 656
Query: 1546 IVRDAYNFLISNKIGNILPDHNWRFLWKLNCPQKIK 1439
V+ AY + + ++ +R +W + P++++
Sbjct: 657 TVKSAYALITRDDAPRPNMEYLFRRMWHVVAPERVR 692
Score = 93.6 bits (231), Expect(4) = 1e-65
Identities = 46/119 (38%), Positives = 72/119 (60%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ +S KS + S N+ + ++RA + +D GKYLG+P+ RI +T+ +
Sbjct: 354 SGQKVSLPKSKIFFSNNVTTERGERISRASGIAATRDLGKYLGMPILQKRINKDTFGEVL 413
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWG 2101
EK+A+R+ GW +TL+ AGR T+ K VL + H MS + LP S + K+D ++F+WG
Sbjct: 414 EKVASRLSGWKKQTLSLAGRVTMTKAVLSSIPVHTMSTINLPVSTLEKLDSLSRSFVWG 472
Score = 62.4 bits (150), Expect(4) = 1e-65
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Frame = -3
Query: 984 PRHGFSKIKCDGASN-NVKDAEIGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
PR G+ K+ DG+S+ N A GG++R G + A +I + +AE+W + GL+
Sbjct: 846 PRSGWMKLNTDGSSHGNPGAATAGGVLRNGEGEWCGGFALNIGRCGALLAELWGVYYGLV 905
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYREAN 628
GI++LE+E DS V+ + L++ L+ + I YREAN
Sbjct: 906 AAWEKGIRRLELEVDSQVVVEFLTIGIGDTHSLSFLVRMCHGLLKKDWLVHIVHVYREAN 965
Query: 627 GVADYLAKSSVAKEIEGEWITSPPTSILRLLSNDLVG 517
+AD LA + + + P ++ LL D+VG
Sbjct: 966 RLADGLANLAFSLPFGFHRLDETPIEVVVLLQGDVVG 1002
Score = 52.4 bits (124), Expect(4) = 1e-65
Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 5/153 (3%)
Frame = -1
Query: 1442 QIFLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWI 1263
++FLWL + + N YR+H+S C +C ET H+ C A+ +W++ +
Sbjct: 692 RMFLWLVGNQAIMTNAERYRRHLSGTDVCQVCKGGIETILHVLRDCPAMRGIWDRFVPAV 751
Query: 1262 GFQPNLDYINPSTLKYFCRFKGKIGGVNWVNIFPFILWSIWNGRNEWVFNKRVFLPSHV- 1086
Q L G + W F +W W R +F K V
Sbjct: 752 KRQTFFSMPLLEWLYKNLSDNGTGSEIPWPTTFALAVWWGWKWRCGNIFGKNSLWRDRVG 811
Query: 1085 ----LARALRSAREFLNARGNLEHEMCRTEDIV 999
LA+ + SA E N++H RTE +V
Sbjct: 812 FLRNLAKEVMSANEAEKGNSNVDH---RTERMV 841
>ref|XP_008382787.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 801
Score = 132 bits (333), Expect(4) = 7e-64
Identities = 76/232 (32%), Positives = 119/232 (51%), Gaps = 11/232 (4%)
Frame = -2
Query: 2101 GDKD-KKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNLLKE 1925
G+KD + ++ V + + P D G LG R+ + N ALL K WR+ +P+S ++K
Sbjct: 252 GNKDGARKMHWVSXDVLGLPKDLGXLGFRNFQEFNDALLAKQCWRLVSDPNSLWARVIKA 311
Query: 1924 KYYSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWMSNLPLSV 1745
+Y+ NIW K R S +W SIL GRD +K W I G++V VW D W+ +LP+
Sbjct: 312 RYFPRCNIWEATKGGRASWAWSSILTGRDLLKLGSHWQILGGQDVRVWVDKWLPSLPMGH 371
Query: 1744 IAEASNQNVP-DLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISIGSDKCEDQVVWS 1568
+ V +L V +I DSR WDL + F+S+ + I+ IG +D+++W
Sbjct: 372 PMPLGSVPVTLNLRVSSLICPDSRRWDLNFLLPFLSDSDKQAIEDTPIGDLSRKDRIIWG 431
Query: 1567 HSKNGDIIVRDAYNFLISNKI---------GNILPDHNWRFLWKLNCPQKIK 1439
SKNG V+ Y ++ S + +P W+ +WKL P K++
Sbjct: 432 SSKNGIYSVKSGYRWIQSXSLARRDCRLSXARRVPSVLWKAIWKLEVPPKLR 483
Score = 77.0 bits (188), Expect(4) = 7e-64
Identities = 39/119 (32%), Positives = 63/119 (52%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ ++ KS++ AN+ S S + L + V +PG YLG+P WGR ++
Sbjct: 134 SGQKVNLMKSSVFFGANVPASLSAHLGSILGMAVVCNPGTYLGVPAIWGRSKKRGLSYVX 193
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWG 2101
++ +MQGW +L+ AG+ LIK V+ + + MS+ K P + ++D F WG
Sbjct: 194 GRILEKMQGWKQSSLSRAGKEVLIKAVVQAIPAYPMSIFKFPAIVCKELDTLVAAFWWG 252
Score = 59.3 bits (142), Expect(4) = 7e-64
Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Frame = -1
Query: 1436 FLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWIGF 1257
FLWL HN L E+L+R+ S C C + ET HLFF C V P+W F
Sbjct: 485 FLWLTLHNCLPTCEALFRRRSSLSXTCPXCLSHDETIEHLFFTCPWVEPVW--------F 536
Query: 1256 QPNLDY-INPSTLKYFCRFKGKI--------GGVNWVNIF-PFILWSIWNGRNEWVFNKR 1107
L+Y I+ + + + + + +W+ + + W IW R ++VFNK
Sbjct: 537 GGALNYKIDRAAIHSWVEWLXAVWSSSLVPSNHADWMRSYIAYTCWVIWKTRCDFVFNKV 596
Query: 1106 VFLPSHVLARALRSAREFLNARGNL 1032
PS VL + FL A +L
Sbjct: 597 PIYPSKVLFAISTAVGSFLAANVSL 621
Score = 47.8 bits (112), Expect(4) = 7e-64
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 2/155 (1%)
Frame = -3
Query: 984 PRHGFSKIKCDGASNNVKDAEIGGI-IRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P KI D + + V G+ IR G F A I AE + G
Sbjct: 641 PTSPLXKINVDASWSKVSKLGFAGVVIRAAEGRFVAAARYPISAPSAAAAEALALLRGCD 700
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRETST-PWVMRSLIKDIEELMLSFDDIVIGQRYREA 631
L +GI ++ +E+D AV W ++ +++L +F R A
Sbjct: 701 LGVALGINEVIIESDCRDAVNCLSDSLEMGSWEAFPVLAQVKQLREAFQFCRWSWVPRSA 760
Query: 630 NGVADYLAKSSVAKEIEGEWITSPPTSILRLLSND 526
NGVA LA + E W+ PP+S++ +L+ND
Sbjct: 761 NGVAHELASVGFTEMREFVWVERPPSSLVFVLNND 795
>ref|XP_009116295.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 782
Score = 117 bits (292), Expect(4) = 4e-63
Identities = 64/216 (29%), Positives = 118/216 (54%), Gaps = 5/216 (2%)
Frame = -2
Query: 2071 VGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNLLKEKYY--SYSNIW 1898
V WEK+C+P GGLG+R N AL+ K+ WR+ + +S +L+ KY S ++
Sbjct: 249 VSWEKICKPKAEGGLGIRGSRDMNKALIAKVGWRLLRDTESLWARVLRSKYNVGSIHDLS 308
Query: 1897 TCGKKNRTSVSWRSILKG-RDTVKSSIRWSIRDGRNVSVWNDPWMSNLPLSVIAEAS-NQ 1724
G+++ S +W S++ G R+ V + W+I +GR++ W D W+SN PLS + +
Sbjct: 309 WTGRRSNGSSTWSSVVLGIREVVMTGHSWAIGNGRDIKFWTDRWLSNQPLSSVTIGELPE 368
Query: 1723 NVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISIGS-DKCEDQVVWSHSKNGDI 1547
D+ V+++ WDL I F+++ E+ A+ + + + ED++ WS +KNG +
Sbjct: 369 GYEDVTVREMWVVGG-GWDLAHIAPFVTDETRLELAAVVVDTVNDSEDRLAWSQTKNGQL 427
Query: 1546 IVRDAYNFLISNKIGNILPDHNWRFLWKLNCPQKIK 1439
V+ AY + + ++ +R +W + P+++K
Sbjct: 428 TVKSAYALITRDDAPRPNMEYLFRRMWHVVPPERVK 463
Score = 89.7 bits (221), Expect(4) = 4e-63
Identities = 45/119 (37%), Positives = 70/119 (58%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ +S KS + S N+ + ++RA + +D GKYLG+P+ RI +T+ +
Sbjct: 125 SGQKVSLPKSKIFFSNNVTTERGERISRASGIAATRDLGKYLGMPILQKRINKDTFGEVL 184
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWG 2101
EK+A+ + GW +TL+ AGR T K VL + H MS + LP S + K+D ++F+WG
Sbjct: 185 EKVASLLSGWKKQTLSLAGRVTTTKAVLSSIPVHTMSTINLPVSTLEKLDSLSRSFVWG 243
Score = 60.8 bits (146), Expect(4) = 4e-63
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Frame = -3
Query: 984 PRHGFSKIKCDGASNNVKDAEI-GGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P+ G+ K+ DG+S+ E GG++R G + A +I + +AE+W + G +
Sbjct: 617 PQSGWMKLNTDGSSHGNPGPETAGGVLRNGEGEWCGGFALNIERCGALLAELWRVYYGFV 676
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYREAN 628
+ GI++LE+E DS V+ + L++ L+ + I YREAN
Sbjct: 677 VAWEKGIRRLELEVDSQVVVEFLTTGIGDTHSLSFLVRMCHGLLKKDWLVHIVHVYREAN 736
Query: 627 GVADYLAKSSVAKEIEGEWITSPPTSILRLLSNDLVG 517
+AD LA + + + P ++ LL D+VG
Sbjct: 737 RLADCLANLAFSLPFGFHRLDETPIEVVVLLQEDVVG 773
Score = 46.6 bits (109), Expect(4) = 4e-63
Identities = 40/156 (25%), Positives = 60/156 (38%), Gaps = 5/156 (3%)
Frame = -1
Query: 1442 QIFLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWI 1263
++FLWL + + N YR H+S C +C ET H+ C A+ +W+ +
Sbjct: 463 KMFLWLVGNQAIMTNAERYRWHLSGTDVCQVCKGGIETILHVLRDCPAMRGIWDLFVPAV 522
Query: 1262 GFQPNLDYINPSTLKYFCRFKGKIGGVNWVNIFPFILWSIWNGRNEWVFNKRVFLPSHV- 1086
Q L G + W F +W W R +F K + V
Sbjct: 523 KRQTFFSMPLLEWLYKNLSDNGTGREIPWPTTFALAVWWGWKWRCGNIFGKNSLWRNRVG 582
Query: 1085 ----LARALRSAREFLNARGNLEHEMCRTEDIVVPW 990
LA+ + A E N++H RTE I+V W
Sbjct: 583 FLRNLAKEVMLANEAEKGNPNVDH---RTE-IMVGW 614
>ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936764 [Pyrus x
bretschneideri]
Length = 1365
Score = 111 bits (278), Expect(4) = 3e-62
Identities = 70/235 (29%), Positives = 112/235 (47%), Gaps = 11/235 (4%)
Frame = -2
Query: 2113 FLVGGDKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNL 1934
FL G +DK ++ V WE V P GGLG++D N ALL K W++ +
Sbjct: 824 FLWGHTEDKSKVHLVKWETVSTPKSMGGLGLKDTHAMNQALLAKTGWKLMQRDPGLWAQV 883
Query: 1933 LKEKYYSYSN-IWTCGKK-NRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWM-- 1766
LK KY + + + C K S +WR IL G + + +RW + G + W D W+
Sbjct: 884 LKGKYLKHHDMVGACSAKFTNCSHTWRGILFGAQIIPNGMRWRVGSGSQIHFWKDNWLES 943
Query: 1765 ------SNLPLSVIAEASNQNVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISI 1604
+ +PLS A+ +V D L D W++ + + + E I ++ +
Sbjct: 944 GVLENFATIPLS--ADMLEWSVDDFLTDD-------GWNVELLYSCLPPDIVEHIFSLHV 994
Query: 1603 G-SDKCEDQVVWSHSKNGDIIVRDAYNFLISNKIGNILPDHNWRFLWKLNCPQKI 1442
G ++ ED+V+WS + +G V+ AY L + +I+P W F+WKL P K+
Sbjct: 995 GIANHREDKVIWSLTNSGTFSVKTAYLSLFGD--DDIIP-WKWNFIWKLKLPPKL 1046
Score = 86.3 bits (212), Expect(4) = 3e-62
Identities = 43/119 (36%), Positives = 66/119 (55%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ ++ KS + S N+ RS + +A + D G+YLG+PL R+ TY ++
Sbjct: 709 SGQQVNFDKSCIYCSPNISRSKAIEIANICGSPLTSDLGQYLGVPLLHSRVNKETYGNIV 768
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWG 2101
EK+ R+ W S TL+ AGR ++ V + + M +LP S+ KID+ +NFLWG
Sbjct: 769 EKVQRRLSAWKSNTLSMAGRLVYLQSVASAIPIYSMQSTRLPISICDKIDKLNRNFLWG 827
Score = 61.6 bits (148), Expect(4) = 3e-62
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Frame = -3
Query: 984 PRHGFSKIKCDGASNN-VKDAEIGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P G KI DG+ N+ + GG+IR G + A ++ + AE+W + GL
Sbjct: 1200 PPIGRYKINTDGSCNDPFRHISAGGLIRNSEGDWIKGFAANLGRGTIMEAELWGVFMGLS 1259
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYREAN 628
+ + G + + +E DS AV L ++ + +LI D +E + + YRE N
Sbjct: 1260 IAWDEGCRDVILECDSWDAVTLIQKPILDSHPLYNLIIDCKEAIGKNWRCEVTHIYREMN 1319
Query: 627 GVADYLAKSSVAKEIEGEWITSPPTSILRLLSNDLVGRAVVRNV 496
AD++A + SPPTS +L +D +GRA+ R V
Sbjct: 1320 ASADHMADLGHGLSLGLHVFVSPPTSASNVLVSDSIGRALPRAV 1363
Score = 51.6 bits (122), Expect(4) = 3e-62
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Frame = -1
Query: 1436 FLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWIGF 1257
FLW H + N R+ +N+ C +C N E+ +H+F C+ W + +G
Sbjct: 1049 FLWTIGHGKILTNVQRARRGFTNNPCCPICPNIEESMDHIFRSCKQSPFFW----NGVGI 1104
Query: 1256 QPN------LDYIN--PSTLKYFCRFKGKIGGVNWVNIFPFILWSIWNGRNEWVFNKRVF 1101
P LD+ + L+ C I G+ W IF LW W GRN VFN
Sbjct: 1105 PPEVAHSFALDFQSWMAINLRTQC---STIHGLPWNLIFASTLWYCWKGRNNLVFNDGQQ 1161
Query: 1100 LPSHVLARALRSAREFLNARGNLEHEMCRTEDIVVPWI 987
P + AR++ +A + + R + I + WI
Sbjct: 1162 PPVSPQKFIFQFARDWYDANKSTSSKPPR-QIISIHWI 1198
>ref|XP_009151561.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 1204
Score = 101 bits (251), Expect(4) = 7e-59
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 7/218 (3%)
Frame = -2
Query: 2071 VGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNLLKEKYY---SYSNI 1901
+ W++VCRP GGLG+R N ALL K+ WR+ ++ + +L+ KY + +
Sbjct: 671 ISWDRVCRPKADGGLGIRVSRDMNKALLAKVGWRLLNDKEGLWARVLRSKYSVGDMHDSS 730
Query: 1900 WTCGKKNRTSVSWRSILKG-RDTVKSSIRWSIRDGRNVSVWNDPWMSNLPL--SVIAEAS 1730
W N S +WRS++ G R+ V W I +GR + W D W+S PL V+ +
Sbjct: 731 WMVAGSN-VSSTWRSVVMGIREVVAKGHSWVIGNGREIKFWTDKWLSRQPLMGEVLGDLP 789
Query: 1729 NQNVPDLLVKDIINFDSRTWDLTAIDGFI-SERVAEEIKAISIGSDKCEDQVVWSHSKNG 1553
+ ++ +++ D WDL+ I +I ER E + + +D++ W NG
Sbjct: 790 -EGYENITARELW-LDGGGWDLSRISPYIPDERRLERVAVVVDTVSGVKDRLAWGEVPNG 847
Query: 1552 DIIVRDAYNFLISNKIGNILPDHNWRFLWKLNCPQKIK 1439
V+ AY+ + + ++ ++ +W++ P++++
Sbjct: 848 QFTVKTAYDLITRDNTPRQQMENLFKSMWRVVAPERVR 885
Score = 90.1 bits (222), Expect(4) = 7e-59
Identities = 44/119 (36%), Positives = 71/119 (59%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ +S KS + S N+ R + ++R + ++ GKYLG+P+ RI T+ +
Sbjct: 547 SGQKVSLPKSKIFFSGNVTRERGELISRESGISSTRELGKYLGMPILQKRINKETFGEVL 606
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWG 2101
EK+A+R+ GW +TL+ AGR T+ K VL + H MS + +P S + K+D ++F+WG
Sbjct: 607 EKVASRLSGWKKQTLSLAGRVTMTKAVLSSIPVHSMSTIHMPVSTLDKLDSLSRSFVWG 665
Score = 62.8 bits (151), Expect(4) = 7e-59
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Frame = -3
Query: 984 PRHGFSKIKCDGASN-NVKDAEIGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
PR G+ K+ DGAS+ N A GG++R G + A +I + +AE+W + GL+
Sbjct: 1039 PRGGWMKLNTDGASHGNPGLASAGGVLRDGEGEWCGGFALNIGRCSAPLAELWGVYYGLV 1098
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYREAN 628
+ GI++LEVE DS V + L++ + + I YREAN
Sbjct: 1099 IAWEKGIRRLEVEVDSKMVVGFLTTGIEDTHPLSFLVRLCHGFLTRDWLVRIVHVYREAN 1158
Query: 627 GVADYLAKSSVAKEIEGEWITSPPTSILRLLSNDLVGRAVVRNVRL 490
+AD LA +++ P + L+ D+ G R VRL
Sbjct: 1159 RLADGLANLAISLPFGFHRFDVVPLEFVSLIREDVDGLLQPRQVRL 1204
Score = 45.8 bits (107), Expect(4) = 7e-59
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 6/157 (3%)
Frame = -1
Query: 1442 QIFLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWI 1263
++FLWL + + N YR+H+S C +C ET H+ C A+ +W + ++
Sbjct: 885 RVFLWLVGNQAIMTNAERYRRHLSGTDVCQVCKGGVETILHVLRDCPAMEGIWSR---FV 941
Query: 1262 GFQPNLDYINPSTLKYFCR---FKGKIGGVNWVNIFPFILWSIWNGRNEWVFNKRVFLPS 1092
+ + L++ R + W F +W W R VF
Sbjct: 942 PSTKRQAFFSMPLLEWLYRNLYDNDAQNEIPWATTFALGVWWGWKWRCGNVFGDNRLWRD 1001
Query: 1091 HVLARALRS-AREFLNARGNLEHEMCRTE--DIVVPW 990
V + LR+ ARE + A+ E R + +I+V W
Sbjct: 1002 RV--KFLRNLAREVMRAKKTEEESRARVQRVEIMVGW 1036
>ref|XP_008364703.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 749
Score = 120 bits (300), Expect(4) = 7e-59
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 15/237 (6%)
Frame = -2
Query: 2104 GGDKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNLLKE 1925
GG K I+ V E + P + GG+G + + N ALL K WR+ P+S ++K
Sbjct: 187 GGGK----IHWVSKEVLGLPKNIGGMGFKSFKEFNDALLAKQCWRLICEPNSLWARVIKA 242
Query: 1924 KYYSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWMSNL---- 1757
+Y+ + + K R S +W S+L GRD + W I G +V VW D W+ +L
Sbjct: 243 RYFPHCSFLEASKGGRASWAWSSLLSGRDVILQGTHWQILGGEDVRVWVDRWLPSLXLGH 302
Query: 1756 --PLSVIAEASNQNVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISIGSDKCED 1583
PL +A N V L SR WDL + F ++ E I+A IG D
Sbjct: 303 PVPLGGVAVXRNLRVCKLFCP-----LSREWDLNFLQPFXTDVEXETIRATPIGDSSRRD 357
Query: 1582 QVVWSHSKNGDIIVRDAYNFLISNKI---------GNILPDHNWRFLWKLNCPQKIK 1439
+++W+ SKNG V+ Y ++ S + +P+ W+ LWK+ P KI+
Sbjct: 358 RLIWAASKNGRYSVKSGYRWIQSRSLCLRDSRLPHARSVPEELWKCLWKIEVPPKIR 414
Score = 82.0 bits (201), Expect(4) = 7e-59
Identities = 40/120 (33%), Positives = 64/120 (53%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ ++ KS++ AN S+ + R L + V DPG YLG+P WGR ++
Sbjct: 65 SGQEVNMQKSSMYFGANTPCEVSQELGRILGMPVVGDPGTYLGVPALWGRSKNRGLAYVK 124
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWGE 2098
++A ++QGW TL+ AG+ LIK V+ + + M++ K P + +D F WG+
Sbjct: 125 GRIAGKLQGWKQSTLSKAGKEVLIKAVVQAIPAYPMNIFKFPAVVCDDLDALVAGFWWGK 184
Score = 54.7 bits (130), Expect(4) = 7e-59
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Frame = -1
Query: 1436 FLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWIGF 1257
FLW HN L N +L+++ SN C +C + E++ H+F C V +W + +
Sbjct: 416 FLWSSLHNALATNMNLFKRRASNSPICPICLCDDESTVHIFLLCPWVKHVW--FGGVLSY 473
Query: 1256 QPNLDYINPSTLKYFCRFKGKIGGVN---WV-NIFPFILWSIWNGRNEWVFNKRVFLPSH 1089
+ + I+ L F G + WV + F W IW R ++VFN +PS
Sbjct: 474 KVDGSAISSWFLWLQAIFSSNFGAPDDGMWVRSCVAFTCWFIWKARCDFVFNXVKIIPSR 533
Query: 1088 VLARALRSAREFLNARGNLEHEMC 1017
V+ A+ SA + A G E+C
Sbjct: 534 VV-XAISSAMDSFLAAGR-SXEVC 555
Score = 43.1 bits (100), Expect(4) = 7e-59
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Frame = -3
Query: 984 PRHGFSKIKCDGASNNVKDAE-IGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P FSKI D + + +G ++R G F A I ++ AE + G
Sbjct: 574 PDPPFSKINVDASWCRMSLVGFVGVVVRSAEGQFIAAARYSIKASNAAAAEALALLHGCK 633
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRE----TSTPWVMRSLIKDIEELMLSFDDIVIGQRY 640
L +G+ ++ +E+DS AV + + +++K I E +F
Sbjct: 634 LGVTLGLSEVIIESDSLEAVSCLSNSLEDGSXEAFPFLAMVKKIGE---TFQXCRWSWVP 690
Query: 639 REANGVADYLAKSSVAKEIEGEWITSPPTSILRLLSND 526
R AN AD L+ + + W+ PP+S++ +L+ND
Sbjct: 691 RTANMAADVLSSRVCTEMCDVVWVDRPPSSLVFVLNND 728
>ref|XP_008346916.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 1007
Score = 121 bits (303), Expect(4) = 3e-58
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 15/237 (6%)
Frame = -2
Query: 2104 GGDKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNLLKE 1925
GG K I+ V E + P + GG+G + + N ALL K WR+ P+S ++K
Sbjct: 445 GGGK----IHWVSKEVLGLPKNIGGMGFKSFKEFNDALLAKQCWRLICEPNSLWARVIKA 500
Query: 1924 KYYSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWMSNL---- 1757
+Y+ + + K R S +W S+L GRD + W I G +V VW D W+ +L
Sbjct: 501 RYFPHCSFLEASKGGRASWAWSSLLSGRDVILQGTHWQILGGEDVRVWVDRWLPSLLLGH 560
Query: 1756 --PLSVIAEASNQNVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISIGSDKCED 1583
PL +A N V L SR WDL + F ++ E I+A IG D
Sbjct: 561 PVPLGXVAVTRNLRVCKLFCP-----LSREWDLNFLQPFXTDVEXETIRATPIGDSSRRD 615
Query: 1582 QVVWSHSKNGDIIVRDAYNFLISNKI---------GNILPDHNWRFLWKLNCPQKIK 1439
+++W+ SKNG V+ Y ++ S + +P+ W+ LWK+ P KI+
Sbjct: 616 RLIWAASKNGRYSVKSGYRWIQSRSLCLRDSRLPHARSVPEELWKCLWKIEVPPKIR 672
Score = 82.4 bits (202), Expect(4) = 3e-58
Identities = 40/120 (33%), Positives = 64/120 (53%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ ++ KS++ AN S+ + R L + V DPG YLG+P WGR ++
Sbjct: 323 SGQEVNMQKSSMYFGANTPCEVSQELGRILGMPVVGDPGTYLGVPALWGRXKNRGLAYVK 382
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWGE 2098
++A ++QGW TL+ AG+ LIK V+ + + M++ K P + +D F WG+
Sbjct: 383 GRIAGKLQGWKQSTLSKAGKEVLIKAVVQAIPAYPMNIFKFPAVVCDDLDALVAGFWWGK 442
Score = 51.2 bits (121), Expect(4) = 3e-58
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Frame = -1
Query: 1436 FLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWIGF 1257
FLW HN L +L+++ SN C +C + E++ H+F C V +W + +
Sbjct: 674 FLWSSLHNALATKVNLFKRGASNSPICPICLCDDESTVHIFLLCPWVKHVW--FGGVLSY 731
Query: 1256 QPNLDYINPSTLKYFCRFKGKIGGVN---WV-NIFPFILWSIWNGRNEWVFNKRVFLPSH 1089
+ + I+ L F G + WV + F W IW R ++VFN +PS
Sbjct: 732 KVDGXAISSWFLWLQAIFSSNFGAPDDGMWVRSCVAFTCWFIWKARCDFVFNXVKIIPSR 791
Query: 1088 VLARALRSAREFLNARGNLEHEMC 1017
V+ A+ SA + A G E+C
Sbjct: 792 VV-XAISSAMDSFLAAGR-SXEVC 813
Score = 43.1 bits (100), Expect(4) = 3e-58
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Frame = -3
Query: 984 PRHGFSKIKCDGASNNVKDAE-IGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P FSKI D + + +G ++R G F A I ++ AE + G
Sbjct: 832 PDPPFSKINVDASWCRMSLVGFVGVVVRSAEGQFIAAARYSIKASNAAAAEALALLHGCK 891
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRE----TSTPWVMRSLIKDIEELMLSFDDIVIGQRY 640
L +G+ ++ +E+DS AV + + +++K I E +F
Sbjct: 892 LGVTLGLSEVIIESDSLEAVSCLSNSLEDGSXEAFPFLAMVKKIGE---TFQXCRWSWVP 948
Query: 639 REANGVADYLAKSSVAKEIEGEWITSPPTSILRLLSND 526
R AN AD L+ + + W+ PP+S++ +L+ND
Sbjct: 949 RTANMAADVLSSRVCTEMCDVVWVDRPPSSLVFVLNND 986
>ref|XP_009140270.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 866
Score = 124 bits (311), Expect(4) = 6e-58
Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 10/235 (4%)
Frame = -2
Query: 2113 FLVGGDKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNL 1934
F G D K ++ W ++ P GG+G RD+E N ALL K AWRI P+S + +
Sbjct: 325 FWWGKDDGSKGMHWFAWNRMSLPKKEGGMGFRDIEKFNDALLGKQAWRILTKPNSLMARV 384
Query: 1933 LKEKYYSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWM---- 1766
+K +Y+ ++I + + S WRSIL G+D + +R I +G + W DPW+
Sbjct: 385 MKGRYFPSTSILNARETRQNSYIWRSILHGKDLLTKGVRCVIGNGNTIDTWTDPWLPTNP 444
Query: 1765 SNLPLSVIAEASNQNVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISIGSDKCE 1586
P+ + + N V D + + + + W+ I +++ AEEI AI + S +
Sbjct: 445 PRAPVPIFDQHGNSKVSDFMHRGL-----KEWNEELIRNTMNQADAEEILAIKLCSSDED 499
Query: 1585 DQVVWSHSKNGDIIVRDAYNFLISNKIGN--ILPDHN----WRFLWKLNCPQKIK 1439
DQ+VW ++K GD V+ Y +L ++ N ++P + +WKLN K+K
Sbjct: 500 DQLVWHYNKTGDYTVKSGY-WLATHTPNNQQVIPPPGDTQLKQLIWKLNTAPKVK 553
Score = 77.0 bits (188), Expect(4) = 6e-58
Identities = 42/120 (35%), Positives = 63/120 (52%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ ++ KS++ + + M L + GKYLGIP Q+GR ++T
Sbjct: 210 SGQAVNLNKSSITFGSRVKDQVKTQMRHLLGIHNEGGGGKYLGIPEQFGRKKAEILKYVT 269
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWGE 2098
EK+ + QGW +K L+P G+ LIK V S + M+ KLPKS+ +I+ F WG+
Sbjct: 270 EKVKTKTQGWQNKFLSPGGKEVLIKSVASATSVYPMNTFKLPKSVCEEINNILATFWWGK 329
Score = 54.7 bits (130), Expect(4) = 6e-58
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Frame = -1
Query: 1436 FLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKI----KD 1269
F+W L L ++L R+HI+N + C C E ET++HLFF C +W
Sbjct: 555 FMWKMITLSLPLGKNLQRRHITNSVKCPHCYQE-ETADHLFFDCINAQCIWRASGYPNSG 613
Query: 1268 WIGFQPNLDYINPSTLKYFCRFKGKIGGVNWVNIFPFILWSIWNGRNEWVFNKRVFLPSH 1089
+ Q L+ L + + W +ILW IW RN+ +F +++ +
Sbjct: 614 LLRSQVTLEAKLSLLLNQDATIPDHLKQLPW-----WILWRIWKDRNKMIFQQKLTHWRY 668
Query: 1088 VLARALRSAREFLNAR 1041
+L A + +E++ A+
Sbjct: 669 LLQAAYQDTKEWMEAQ 684
Score = 40.8 bits (94), Expect(4) = 6e-58
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Frame = -3
Query: 984 PRHGFSKIKCDGASNNVKD-AEIGGIIRVDNGGFQACLARHIYKNDNNV-AEVWEIREGL 811
P GF K DG+ N+ A+ G +IR G F+ K N + +E+ + +
Sbjct: 709 PEMGFVKCNYDGSFYNINTPAQAGWLIRDSTGLFKGAGQFKTRKPHNALESELQALLGAM 768
Query: 810 LLEKNIGIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYREA 631
++ + G K+ E D+ + L K+ T V+ L +DI + F+ + RE+
Sbjct: 769 MICWSQGYTKVIFEGDNINVINLLKKRTKNINVVNWL-RDIWKWEQKFESLQYTWTNRES 827
Query: 630 NGVADYLAKSSVAKEIEGEWITSPPTSILRLLSND 526
N AD LAK + E + P I ++S D
Sbjct: 828 NSCADLLAKQQLQDNDEYIYHPCIPNVIRDVISVD 862
>ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844431 [Brassica rapa]
Length = 1834
Score = 92.8 bits (229), Expect(4) = 9e-58
Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 9/229 (3%)
Frame = -2
Query: 2098 DKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNLLKEKY 1919
D D+K + V WEKVC+P GGLG+R + N+ALL K+ WR+ + D +L++K+
Sbjct: 1293 DGDRKQ-HLVAWEKVCKPRREGGLGIRSAKEMNIALLAKLGWRVLNTHDDLWVQILRKKF 1351
Query: 1918 ---YSYSNIWTCGKKNRTSVSWRSILKG-RDTVKSSIRWSIRDGRNVSVWNDPWMSNLPL 1751
+ + W K S +WRSI+ G + V W + DGR V W D W+ PL
Sbjct: 1352 RVGEIHESSWLV-PKGTWSPTWRSIILGVGECVVPGTCWILGDGRRVRFWKDNWLMQEPL 1410
Query: 1750 SVIAEASNQNVPDLLV----KDIINFDSRTWDLTAIDGFISERVAEEIKAISIGS-DKCE 1586
+ S ++P+ L+ +D+ R W + I+ +IS + ++ I
Sbjct: 1411 QSL---STVDIPEELLEAKARDLWQ-SGRGWLIQCIEPYISMEHRLCLASVVIDDVTGAR 1466
Query: 1585 DQVVWSHSKNGDIIVRDAYNFLISNKIGNILPDHNWRFLWKLNCPQKIK 1439
D++ W SK+G V+ AY L ++ + + +W++ P++++
Sbjct: 1467 DRMSWGGSKDGLFSVKSAYALLTKDEKPRPNMNAFYDRVWRVIVPERVR 1515
Score = 87.8 bits (216), Expect(4) = 9e-58
Identities = 42/121 (34%), Positives = 72/121 (59%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ +S KS + S N+ R + ++ ++ KD GKYLG+P+ RI T+ +
Sbjct: 1172 SGQKVSLEKSLIFFSENVHRDLTTLISDESGIKATKDLGKYLGMPVLQKRINKETFGTII 1231
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWGE 2098
E++++++ GW + L+ AGR TL K VL + H MS + LP S + ++D+ ++F+WG
Sbjct: 1232 ERMSSKLAGWKRRFLSLAGRITLTKSVLSSIPVHTMSSIALPMSTLNQLDKIARSFIWGS 1291
Query: 2097 I 2095
+
Sbjct: 1292 V 1292
Score = 63.5 bits (153), Expect(4) = 9e-58
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Frame = -3
Query: 984 PRHGFSKIKCDGASN-NVKDAEIGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P +G+ K+ DGAS N A GG++R +NG +Q A +I +AE+W + G +
Sbjct: 1669 PSNGWCKLNTDGASRGNPGLATAGGVMRDENGEWQGGFAVNIGICSATLAELWGVYYGFV 1728
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYREAN 628
+ GI++LEVE DS V K + L++ + + I YREAN
Sbjct: 1729 IAWENGIRRLEVEVDSATVVGFLKTGIHDAHPLSFLVRLCYGFISRDWLVKISHVYREAN 1788
Query: 627 GVADYLAKSSVAKEIEGEWITSPPTSILRLLSNDLVGRAVVRNVRL 490
+AD LA + + + P + +L D+ G R V L
Sbjct: 1789 CLADGLANYAFSLSFGVHYFELVPEHVASILLEDVYGITRSRQVYL 1834
Score = 52.0 bits (123), Expect(4) = 9e-58
Identities = 33/119 (27%), Positives = 47/119 (39%)
Frame = -1
Query: 1442 QIFLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWI 1263
++FLWL H + N R+H+S++ C LC + ET H C A LW ++ D
Sbjct: 1515 RVFLWLVSHQVIMTNMERKRRHLSDNGMCQLCKSGNETILHTLRDCPASMGLWRRLVDPS 1574
Query: 1262 GFQPNLDYINPSTLKYFCRFKGKIGGVNWVNIFPFILWSIWNGRNEWVFNKRVFLPSHV 1086
Q D L G W +F +W W R +VF + P V
Sbjct: 1575 RQQRFFDQSLLQWLYENLTSAQSANGERWPTMFALTVWWCWKWRCGYVFGETGKCPDRV 1633
>ref|XP_010693635.1| PREDICTED: uncharacterized protein LOC104906563 [Beta vulgaris subsp.
vulgaris]
Length = 1307
Score = 119 bits (299), Expect(4) = 8e-56
Identities = 63/225 (28%), Positives = 116/225 (51%)
Frame = -2
Query: 2113 FLVGGDKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNL 1934
F D KS N +GW++VCRP GG+G R +NN+AL K+ W++ + +S L
Sbjct: 785 FFWNKDVSSKSPNLIGWDRVCRPKVCGGIGFRKAGVNNVALQMKLLWKLVKDNNSMWVKL 844
Query: 1933 LKEKYYSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWMSNLP 1754
+K KY+ +++ S WR +++ R+T K +RW + G +S W+D W+
Sbjct: 845 VKNKYFKNKSLFEYKPTAVASWQWRQLMRLRETFKKGLRWQLGSGSQISFWHDNWVFQFL 904
Query: 1753 LSVIAEASNQNVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISIGSDKCEDQVV 1574
L + ++ V + V D D+R W+++ + + E + I ++ I + ++++V
Sbjct: 905 LKAVVHRASYPV-NFKVSDCF-LDNRQWNVSLLRANVPEHMVTTISSLYIPMNDQQNKLV 962
Query: 1573 WSHSKNGDIIVRDAYNFLISNKIGNILPDHNWRFLWKLNCPQKIK 1439
W S +GD V+ L + + + +R++WK++ P KIK
Sbjct: 963 WGLSPDGDYSVKTG-ALLAQGLLPSPPEEVEFRWIWKVDVPPKIK 1006
Score = 68.9 bits (167), Expect(4) = 8e-56
Identities = 34/120 (28%), Positives = 64/120 (53%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQM++ KS S N+ + A L++ ++D G YLG P+ R+ T+ +
Sbjct: 670 SGQMVNFNKSAFQVSDNVSDDVKRNFASILQMTESEDLGSYLGCPIIQERVTKETFATVV 729
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWGE 2098
+ +++ W + +L+ AGR LI+ L +N M LPK+ ++++D+ ++F W +
Sbjct: 730 SRANSQLTKWKANSLSQAGRAVLIQANLATKANFQMQSFFLPKTTLSRLDKIYRDFFWNK 789
Score = 52.0 bits (123), Expect(4) = 8e-56
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Frame = -3
Query: 999 CSMDFPRHGFSKIKCDGASNNVKDAEIGGIIRVDNGGFQACLARHIYKNDNNV-AEVWEI 823
C P G +KI DG+ + A +G +IR G + + + + + AE W +
Sbjct: 1160 CLWSPPPSGVAKINFDGSKLSSGHATLGFVIRDHLGDVLLAGSNSLGCSLSVLQAEAWGL 1219
Query: 822 REGLLLEKNIGIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQR 643
E + +++ I + +E D+ + TPW + ++I DI + + F+ + +
Sbjct: 1220 LEAVRGARSLDISNVVIEGDNLAVINAVNSVWRTPWEIDNIICDIGQELRKFNSVTVKHC 1279
Query: 642 YREANGVADYLA 607
+REAN AD++A
Sbjct: 1280 FREANRAADFMA 1291
Score = 48.9 bits (115), Expect(4) = 8e-56
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Frame = -1
Query: 1442 QIFLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWI 1263
+IFLW C++GL + L + H+ C LC + ET+ HLF C + ++ ++
Sbjct: 1006 KIFLWKLCNDGLPTKDRLEKSHVFLPQQCVLCTSHCETATHLFCLCPFTSDVFLHLQASK 1065
Query: 1262 GFQ--PNLDYINPST--LKYFCRFKGKIGGVNWVNIFPFILWSIWNGRNEWVFNKR---- 1107
G+ P L ++ S+ L K + + + + + W IW RN+ +FN+
Sbjct: 1066 GWPCLPGLANVSASSSFLDVLRLLKASLLKQD-LEMIVTVWWFIWFFRNKLIFNEESVSS 1124
Query: 1106 ---VFLPSHVLARALR 1068
F + + A+ALR
Sbjct: 1125 RSASFAIAEIYAKALR 1140
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 102 bits (255), Expect(4) = 1e-55
Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Frame = -2
Query: 2113 FLVGGDKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNL 1934
FL G + K+ ++ V WE + + GGLG+R + N A L K+ WR+ P S + +
Sbjct: 831 FLWGEQEGKRRVHLVAWENISKSKKEGGLGIRSMRQANSAFLVKLGWRLLAEPSSLWSRI 890
Query: 1933 LKEKYY-SYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWMSNL 1757
L+ KY + +I +K+ S +WR IL D V+ I ++ +G W+ W ++
Sbjct: 891 LRAKYCDNRCDIDMFKEKSNASSTWRGILSSIDVVRKGINSAVGNGAKTLFWHHRWATSE 950
Query: 1756 PL-SVIAEASNQNVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAIS-IGSDKCED 1583
PL S+ + + D VK++ + S W + ++ E + I A I ++ D
Sbjct: 951 PLISLASPIPPIELQDATVKEMWDLVS-GWKVDVFANYLPEATLKLIAAHELIDDEEAID 1009
Query: 1582 QVVWSHSKNGDIIVRDAYNFLISNKIGNILPDHNWRFLWKLNCPQKIKF 1436
+ W+ S +G + A N + ++ N+ W +WK+ PQ+++F
Sbjct: 1010 DIYWNGSPSGGFTIGSAMNITRNAELANMDAHPKWSAVWKIPTPQRVRF 1058
Score = 87.8 bits (216), Expect(4) = 1e-55
Identities = 43/120 (35%), Positives = 65/120 (54%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SG +++ KS + SAN + L ++ D GKYLG+P GR Y +L
Sbjct: 716 SGSKVNEDKSKIYFSANTHLDIRDAVCNTLAMEATADFGKYLGVPTINGRSSKREYQYLV 775
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWGE 2098
+++ ++ GW +KTL+ AGR TLI+ + + M KLP+S IDR ++FLWGE
Sbjct: 776 DRINGKLAGWKTKTLSIAGRATLIQSAFSSIPYYTMQSTKLPRSTCDDIDRKSRSFLWGE 835
Score = 52.8 bits (125), Expect(4) = 1e-55
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 4/155 (2%)
Frame = -1
Query: 1442 QIFLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWI 1263
+ F+WL + L N + + + +++ C +C E ++H+ C LW K+ +
Sbjct: 1057 RFFIWLAIQDRLMTNSNRFLRRLTDDPRCLVCGEVEENTDHILRRCPVARILWRKL-GML 1115
Query: 1262 GFQPNLDYINPSTLKYFCRFKGKIGGVNWVNIFPFILWSIWNGRNEWVFNKRVFLP---- 1095
G + N + IN + + G W+ +F W +W RN+ FN+ +P
Sbjct: 1116 G-EHNREEINLGSWITKNLSADTMMGSEWLRVFAVSCWWLWRWRNDRCFNRNPSIPIDQV 1174
Query: 1094 SHVLARALRSAREFLNARGNLEHEMCRTEDIVVPW 990
S + AR N R ++I+V W
Sbjct: 1175 SFIFARVKEIKEAMDRNDTNKSQHSGRRKEILVRW 1209
Score = 45.8 bits (107), Expect(4) = 1e-55
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 4/167 (2%)
Frame = -3
Query: 984 PRHGFSKIKCDGASN-NVKDAEIGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P+ G+ K+ DGAS N A GG+IR G A + AE+ + GL+
Sbjct: 1212 PKEGWVKLNTDGASKGNPGPAGGGGLIRGPRGEIHEVFAINCGSCTCTKAELLAVLRGLM 1271
Query: 807 LEKNIGIKKLEVETDSTYAVQLC--KRETSTPWVMRSLIKDIEELMLSFD-DIVIGQRYR 637
+ K++ V DS +L S+P++ +I L+ + IVI YR
Sbjct: 1272 IAWEGNHKQVIVSVDSELVAKLLISNAPPSSPYI--HIINRCLSLIARKEWKIVIEHCYR 1329
Query: 636 EANGVADYLAKSSVAKEIEGEWITSPPTSILRLLSNDLVGRAVVRNV 496
E N AD LA V I + P + +L DL G A R V
Sbjct: 1330 ETNRAADRLANMGVCAVERVVMIEAIPKDLHAILLEDLSGVAWTRMV 1376
>ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
gi|462406722|gb|EMJ12186.1| hypothetical protein
PRUPE_ppa021345mg [Prunus persica]
Length = 759
Score = 119 bits (299), Expect(4) = 2e-55
Identities = 70/238 (29%), Positives = 115/238 (48%), Gaps = 13/238 (5%)
Frame = -2
Query: 2113 FLVGGDKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNL 1934
F G D + ++ + W+ + +P GG+ R+L NLALL K WRI P S +
Sbjct: 219 FWCGQIGDNRKLHWINWDTLGQPKHEGGMDFRNLHKFNLALLAKQCWRILMEPQSLWVKV 278
Query: 1933 LKEKYYSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWMSN-- 1760
LK +Y+ + + RTS +W S+L+GRD + W + +G ++ +W D W+ N
Sbjct: 279 LKGRYFPNVSFLEAKRSGRTSWAWASLLEGRDILLRGAHWQVMNGAHIRLWIDRWLPNSL 338
Query: 1759 --LPLSVIAEASNQNVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISIGSDKCE 1586
P E ++N L V+ IIN + W+L I IS+ A I + GS +
Sbjct: 339 NDCPRLHSTETLDRN---LRVEAIINRELDEWNLDPIRHAISDSDARAITRVKFGSSRLP 395
Query: 1585 DQVVWSHSKNGDIIVRDAYNFLISNKIGNILPDHN---------WRFLWKLNCPQKIK 1439
D+++W +NG VR Y++L + + P + W+ +WK + P KI+
Sbjct: 396 DRLIWPMERNGSYSVRSGYHWLHNTECRRRNPRPSSSMTIDPRLWKQIWKADVPPKIR 453
Score = 76.3 bits (186), Expect(4) = 2e-55
Identities = 41/121 (33%), Positives = 62/121 (51%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ +S KS ++ S+N M L + D GKYLG+P WGR +++
Sbjct: 104 SGQQVSLTKSNVVFSSNTPSYVRASMCAILGMPDVTDAGKYLGLPTSWGRAKKEELVYVK 163
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWGE 2098
+++ ++ GWN L+ AGR LIK V V + M++ K P +L +ID F G+
Sbjct: 164 DRILRKVHGWNQHCLSQAGREILIKSVALAVPAYPMNIFKFPTTLCKEIDSVLAGFWCGQ 223
Query: 2097 I 2095
I
Sbjct: 224 I 224
Score = 48.5 bits (114), Expect(4) = 2e-55
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Frame = -1
Query: 1436 FLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWIGF 1257
FLW N L + +L++K I+ C LCN+ ET+ H+ C V P+W F
Sbjct: 455 FLWRALRNCLATSANLHKKKIARSPMCPLCNDHPETAEHILLLCPWVEPVW--------F 506
Query: 1256 QPNLDY-INPSTLKYFCRFKGKI--------GGVNWVNIFPFILWSIWNGRNEWVFNKRV 1104
+ +L+ IN + F ++ G + + + + W IW + + V
Sbjct: 507 RCSLNLRINRQAVTSFGQWLGNVIEKGKTPQERSRCLTVIAYFCWQIWKDKCKAVLEHIS 566
Query: 1103 FLPSHVLARALRSAREFLNARGNLEHEMCRTE 1008
P+ A + EFL G+L+H +TE
Sbjct: 567 PSPARTTHAASIAINEFL---GSLDHGRHQTE 595
Score = 43.5 bits (101), Expect(4) = 2e-55
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 1/154 (0%)
Frame = -3
Query: 984 PRHGFSKIKCDGASN-NVKDAEIGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P F K+ D + N N K IG +IR +G F + N AE EG
Sbjct: 611 PTSPFVKVNVDASWNPNSKRVGIGILIRNTHGDFIKGSSIPSVANSAIEAEAQACLEGCK 670
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYREAN 628
L +G ++ + W + ++ I++++ F V R AN
Sbjct: 671 LAAEMGYRQGPLSNGR--------------WEIYPILSTIQDVLNCFQTHVWTWIPRTAN 716
Query: 627 GVADYLAKSSVAKEIEGEWITSPPTSILRLLSND 526
AD+LA ++++ W+ PP+S++ +L+ D
Sbjct: 717 QAADHLAMLAISRMSPEVWVNRPPSSLMHILNKD 750
>ref|XP_013651180.1| PREDICTED: uncharacterized protein LOC106355849 [Brassica napus]
Length = 1321
Score = 104 bits (259), Expect(4) = 3e-55
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 6/227 (2%)
Frame = -2
Query: 2101 GDKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNLLKEK 1922
G+ D+K + V W K+ P D GGL +RD++ N A L K++WRI ++P S + L K
Sbjct: 807 GNGDRK-MAWVSWSKLTLPKDHGGLELRDIQSFNDAYLTKLSWRILNHPKSLLGRTLLGK 865
Query: 1921 YYSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWMSNLPLSVI 1742
Y + T N S WR I+ GRD + + W+I +G + ++WN PW+S
Sbjct: 866 YCPSESFLTVDLHNSCSHGWRGIITGRDLIIQNSGWAIGNGLSTNIWNKPWLSLSEQRRP 925
Query: 1741 AEASNQNVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISIGSDKCEDQVVWSHS 1562
+ + + +L V D+ D WDL I + + I A+ D+++W S
Sbjct: 926 MGPAPEGLLNLTVADLFLPDVNEWDLEKIRQTLPFE-EDRILALKPSLTGAPDKLIWLGS 984
Query: 1561 KNGDIIVRDAYNFLISNKIGNIL-----PDHNW-RFLWKLNCPQKIK 1439
+GD + Y +S++ I+ D +W + +WKL KI+
Sbjct: 985 TSGDYSTKSGYRAALSSQSEPIVATQIDQDFDWKKNVWKLQTAPKIQ 1031
Score = 82.0 bits (201), Expect(4) = 3e-55
Identities = 41/119 (34%), Positives = 67/119 (56%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ I+ AKS++ S + + L ++ GKYLG+P +GR + + +
Sbjct: 687 SGQSINTAKSSINFSRWTPAALKSSVKDTLGIEQEGGTGKYLGLPELFGRKKRDLFSSIV 746
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWG 2101
E++ + GW+++ L+ AG+ T+++ VL P+ +H MS KLP SL T+I NF WG
Sbjct: 747 ERIKQKASGWSNRYLSTAGKLTMLRSVLSPIPSHAMSCFKLPVSLCTRIQSALTNFWWG 805
Score = 65.5 bits (158), Expect(4) = 3e-55
Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Frame = -1
Query: 1442 QIFLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWI 1263
Q+F+W H L E L R+HI C C ET +HLF C +W
Sbjct: 1031 QLFVWKVFHGALPCGEQLVRRHIDVEGKCKRCGLP-ETIDHLFLHCNFARQVWNSAPVLP 1089
Query: 1262 GFQPNLDYINPSTLKYFCRFKG-KIGGVNWVNIFPFILWSIWNGRNEWVFNKRVFLPSHV 1086
+ + D S C K G+ ++ P+ILW IWN RN VFN R+
Sbjct: 1090 SIEYSGDLDVRSGWNSLCTRKCLPPTGIATGSLAPWILWQIWNSRNNLVFNNRIITVEET 1149
Query: 1085 LARALRSAREFLNAR 1041
L+ A+ +A E+ A+
Sbjct: 1150 LSTAVATAAEWSRAQ 1164
Score = 35.8 bits (81), Expect(4) = 3e-55
Identities = 28/127 (22%), Positives = 56/127 (44%)
Frame = -3
Query: 963 IKCDGASNNVKDAEIGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLLLEKNIGIK 784
++ D A + K G D + + + N +AE +R L +++ +
Sbjct: 1187 VRTDAAWSETKKIAGLGWTTEDRSRISSFSSSERFVNSPLLAEGLAMRTALSRCRDLAVT 1246
Query: 783 KLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYREANGVADYLAK 604
++ E+DS + +++ + ++ DI+ + SF+ I RE N VAD LAK
Sbjct: 1247 RIRCESDSVQLISALTSDSAFA-ELYGVVADIKSISSSFEFISFSWISRERNRVADNLAK 1305
Query: 603 SSVAKEI 583
++ E+
Sbjct: 1306 QVLSAEL 1312
>ref|XP_013601015.1| PREDICTED: uncharacterized protein LOC106308403 [Brassica oleracea
var. oleracea] gi|923920408|ref|XP_013729497.1|
PREDICTED: uncharacterized protein LOC106433196 [Brassica
napus]
Length = 1182
Score = 103 bits (257), Expect(4) = 4e-55
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Frame = -2
Query: 2101 GDKD-KKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTNLLKE 1925
G KD + + + W K+ P D GGL RD++ N A L K++WR+ NP + + L E
Sbjct: 666 GKKDGRNKMAWISWTKMTMPKDQGGLDFRDIQSINDAFLTKLSWRLVRNPTNLLGRTLLE 725
Query: 1924 KYYSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWMSNLPLSV 1745
KYY + TC + S WR I+ GRD + + W++ +G ++++W PW+S
Sbjct: 726 KYYPNGDFLTCTVSSSCSHGWRGIMVGRDLIAENSGWAVGNGESLNIWESPWLSLTAQER 785
Query: 1744 IAEASNQNVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISIGSDKCEDQVVWSH 1565
+ + + ++ V ++ + W+L I + +I+ + D+++W H
Sbjct: 786 PIGPAPEALVNITVAELFLPEKNEWNLELIRQILPFE-EHKIRMLKPSWTGAPDKLMWVH 844
Query: 1564 SKNGDIIVRDAYNFLIS-----NKIGNILPDHNWR-FLWKLNCPQKIK 1439
S G+ + Y I +I + D NWR +W L+ K K
Sbjct: 845 SVTGEYTTKTGYAVAIPKHTDLTQIPQGILDFNWRKSVWNLHTAPKNK 892
Score = 72.4 bits (176), Expect(4) = 4e-55
Identities = 37/120 (30%), Positives = 63/120 (52%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ I+ KS + S S + L +Q GKYLG+P +GR + + +
Sbjct: 548 SGQSINTEKSAVTFSRRTPTSLRSTVKETLGIQKVGGSGKYLGLPELFGRKKRDLFSSII 607
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWGE 2098
+++ + GW+++ L+ AG+ T++K VL P+ + M+ +LP SL +I F WG+
Sbjct: 608 DRIQQKAAGWSNRYLSTAGKMTMLKSVLTPIPSFAMTCFQLPVSLCKRIQSTLTGFWWGK 667
Score = 67.4 bits (163), Expect(4) = 4e-55
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Frame = -1
Query: 1448 ENQIFLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKD 1269
+N+IF+W H L + E L + I+ C +C ET +HLF C +W +
Sbjct: 890 KNKIFIWKIFHRALPVGEILRARQINVDGRCKICGLP-ETIDHLFLHCSFAKQVWNLVPV 948
Query: 1268 WIGFQPNLDYINPSTLK-----YFCRFKGKIGGVNWVNIFPFILWSIWNGRNEWVFNKRV 1104
W P++DY + L+ R G+ ++ P+ILW +W RN +FN +
Sbjct: 949 W----PSIDYSGTAELRSEWNHLMARQALPPTGLAAGSLAPWILWQLWKARNSLLFNDKG 1004
Query: 1103 FLPSHVLARALRSAREFLNARGNLEHEMCRTEDIVV 996
F +++ A+ +ARE+ N E+ T+ I++
Sbjct: 1005 FSVRDIISVAIAAAREW-----NQSQELASTKKILL 1035
Score = 43.9 bits (102), Expect(4) = 4e-55
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = -3
Query: 984 PRHGFSKIKCDGASNNV-KDAEIGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P+ +++ D A N K A +G IIR N Y VAE +RE +L
Sbjct: 1041 PQEDSVRVRSDAAWNEANKVAGLGWIIRSRNRSSSYSEPAR-YVGSPLVAEGLALREAIL 1099
Query: 807 LEKNIGIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYREAN 628
+++G+ +L E+D ++ + S + ++ DI+ SFD I RE N
Sbjct: 1100 RCRDLGLPRLRCESDCAQLIKALTSDQSFA-ELYGIVADIKSASFSFDFISFSWISRENN 1158
Query: 627 GVADYLAKSSVAKE 586
AD LAK ++ E
Sbjct: 1159 READDLAKKKLSSE 1172
>ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 896
Score = 115 bits (287), Expect(4) = 3e-54
Identities = 66/197 (33%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
Frame = -2
Query: 2116 KFLVGGDKDKKSINKVGWEKVCRPLDFGGLGVRDLELNNLALLEKMAWRIYDNPDSEVTN 1937
+F G K ++ W+++ P GG+G RD E N ALL K WRI P+S +
Sbjct: 353 QFWWGKSDGSKGMHWFAWQRMSLPKKEGGMGFRDFEKFNDALLAKQVWRILIKPNSLMAR 412
Query: 1936 LLKEKYYSYSNIWTCGKKNRTSVSWRSILKGRDTVKSSIRWSIRDGRNVSVWNDPWM-SN 1760
+LK KY+ SNI G K ++S W S+L G+ +K +R+ I +G +VS+W DPW+ ++
Sbjct: 413 VLKGKYFPNSNILKAGTKKQSSYIWNSLLHGQALLKRGLRFIIGNGESVSLWADPWLPTS 472
Query: 1759 LPLSVIAEASNQNVPDLLVKDIINFDSRTWDLTAIDGFISERVAEEIKAISIGSDKCEDQ 1580
P S I + +Q+ P V +++ + W+ I I E AEEI ++ + + D
Sbjct: 473 PPRSPIPK--DQSNPMTKVSELMKQNQTGWNEELIRHTIVEADAEEILSMKLCAYADTDP 530
Query: 1579 VVWSHSKNGDIIVRDAY 1529
+VW ++K+G+ V+ Y
Sbjct: 531 LVWHYNKSGEYSVKSGY 547
Score = 62.4 bits (150), Expect(4) = 3e-54
Identities = 33/120 (27%), Positives = 58/120 (48%)
Frame = -3
Query: 2457 SGQMISDAKSTLLTSANLGRSFSKGMARALKVQVAKDPGKYLGIPLQWGRIGTNTYLHLT 2278
SGQ ++ +KS++ + + M L + GKYLGIP Q+GR T ++
Sbjct: 239 SGQAVNLSKSSITFGSRVKDQVKTQMRNILGIHNEGGGGKYLGIPEQFGRKKTENLEYVV 298
Query: 2277 EKLANRMQGWNSKTLNPAGRTTLIKYVLDPVSNHIMSMLKLPKSLITKIDRYKKNFLWGE 2098
+ + GW+ + L+P G+ L K + + M++ K+PK + I+ F WG+
Sbjct: 299 ATVKAKTNGWHHRFLSPGGKEVLTKSIASATPVYPMNVFKMPKKVCDDINNTLAQFWWGK 358
Score = 54.3 bits (129), Expect(4) = 3e-54
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Frame = -1
Query: 1442 QIFLWLFCHNGLNLNESLYRKHISNHLGCCLCNNEFETSNHLFFGCRAVAPLWEKIKDWI 1263
Q FLW + L L +L R+H++ + C C E ET+ HLFF C +W
Sbjct: 582 QHFLWKMVTSSLPLGSNLQRRHVTTSVKCPHCQQE-ETTEHLFFECFYAQRIWRA----S 636
Query: 1262 GFQPNLDYINPSTLK-YFCRFKGKIGGV-NWVNIFP-FILWSIWNGRNEWVFNKRVFLPS 1092
G N+ Y STL+ KI + + + P +ILW IW RN+ +F +
Sbjct: 637 GLPHNIFYQAQSTLEDKLMALLQKIPNLPDHLRHLPWWILWRIWKCRNKMIFQQTSIHWR 696
Query: 1091 HVLARALRSAREFLNARGNLEHE 1023
L A +E+L A +++ +
Sbjct: 697 TTLQSAYFDTKEWLEAYQSVDKD 719
Score = 52.4 bits (124), Expect(4) = 3e-54
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Frame = -3
Query: 984 PRHGFSKIKCDGASNNV-KDAEIGGIIRVDNGGFQACLARHIYKNDNNVAEVWEIREGLL 808
P GF K DGA NN+ ++ + G IIR D G F+ A H A E++ LL
Sbjct: 739 PPTGFVKCNYDGAFNNIQRETKAGWIIRDDMGRFKG--AAHASNQQPTTALEGELQALLL 796
Query: 807 LEKNI---GIKKLEVETDSTYAVQLCKRETSTPWVMRSLIKDIEELMLSFDDIVIGQRYR 637
N G K + E D+ ++L E ST + + I+DI F++I R
Sbjct: 797 AMMNCWSKGYKHVIFEGDNINVMKLANGE-STNIDVTNWIRDIWRWPAKFEEIKFCWTNR 855
Query: 636 EANGVADYLAKSSVAKEIEGEWITSPPTSILRLLSND 526
+N AD LAK + + + + P SI +SND
Sbjct: 856 NSNLCADILAKQVIPYRLSYHYYSYVPESIRDPMSND 892