BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00022401
         (1064 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_014509564.1| PREDICTED: protein RTF1 homolog [Vigna radia...   433   e-118
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   433   e-118
gb|KOM31074.1| hypothetical protein LR48_Vigan01g062900 [Vigna a...   429   e-117
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   426   e-116
ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein...   426   e-116
gb|KHN13191.1| RNA polymerase-associated protein RTF1 like [Glyc...   425   e-116
gb|KHN10031.1| RNA polymerase-associated protein RTF1 like [Glyc...   425   e-116
gb|KHN07280.1| RNA polymerase-associated protein RTF1 like [Glyc...   425   e-116
ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein...   425   e-116
ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas...   425   e-116
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop...   424   e-116
ref|XP_011047833.1| PREDICTED: RNA polymerase-associated protein...   423   e-115
ref|XP_011047832.1| PREDICTED: RNA polymerase-associated protein...   423   e-115
ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   423   e-115
ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prun...   423   e-115
ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein...   422   e-115
ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein...   422   e-115
ref|XP_008382360.1| PREDICTED: RNA polymerase-associated protein...   422   e-115
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...   421   e-115
ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ...   421   e-115

>ref|XP_014509564.1| PREDICTED: protein RTF1 homolog [Vigna radiata var. radiata]
            gi|951010508|ref|XP_014509566.1| PREDICTED: protein RTF1
            homolog [Vigna radiata var. radiata]
          Length = 657

 Score =  433 bits (1114), Expect = e-118
 Identities = 229/352 (65%), Positives = 261/352 (74%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K   IYRLCMVKNVDAS+PD+QYK++NK T+KYLN VWG+++SAARWQM M+SDS
Sbjct: 306  GIGRSKTAPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDS 365

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             PLE EF +W+ E++R GGR P++Q+VLEK++AIQKA+T+VYSAATVKQMLQEKKSAS+R
Sbjct: 366  VPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTR 425

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRRE++IA+S+ D  EVERIRARL ELE+SRQ+K KD KAL+LAEMN+KN
Sbjct: 426  PLNVAAEKDRLRRELEIAQSKHDDAEVERIRARLQELEASRQAKQKDAKALKLAEMNRKN 485

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPNXXXXXXXXXXXXXXXXXX 345
            R ENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYY                     
Sbjct: 486  RFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNSVNGVVVG 545

Query: 344  XXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLTEL 165
                  G                         VDT+APVD GTESN LHNF+L ISL  L
Sbjct: 546  PGSNSAGVPVTAEAGMVATAAALEAAADAGKLVDTSAPVDQGTESNMLHNFELPISLALL 605

Query: 164  QKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
            QK            ARKQRIEATVG RV ENDGRRHSLTL+VSDYKRRRGLL
Sbjct: 606  QKYGGAQGAQAGFMARKQRIEATVGFRVSENDGRRHSLTLSVSDYKRRRGLL 657


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max] gi|947101511|gb|KRH50003.1| hypothetical
            protein GLYMA_07G194200 [Glycine max]
          Length = 656

 Score =  433 bits (1113), Expect = e-118
 Identities = 227/352 (64%), Positives = 262/352 (74%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K   IYRLCMVKNVDAS+PD+QYK++NK T+KYLN VWG+++SAARWQM M+SDS
Sbjct: 305  GIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDS 364

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             PLE EF +W+ E++R GGR PS+Q+VLEK++AIQKA+T+VYSAATVKQMLQEKKSAS+R
Sbjct: 365  APLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTR 424

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRRE++IA+S+ D  EVERI+ RLLELE+SRQ+K KD KAL+LAEMN+KN
Sbjct: 425  PLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALKLAEMNRKN 484

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPNXXXXXXXXXXXXXXXXXX 345
            R ENFKNASE+KPVNTGLKAGEAGYDPFSRRWTRSRNYY                     
Sbjct: 485  RFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNSVNGNVAG 544

Query: 344  XXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLTEL 165
                  G+                        VDT+APVD GTESN LHNF+L ISL  L
Sbjct: 545  AGSNGTGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFELPISLALL 604

Query: 164  QKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
            QK            ARKQ+IEATVG RV ENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 605  QKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>gb|KOM31074.1| hypothetical protein LR48_Vigan01g062900 [Vigna angularis]
          Length = 579

 Score =  429 bits (1103), Expect = e-117
 Identities = 229/357 (64%), Positives = 264/357 (73%), Gaps = 5/357 (1%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K   IYRLCMVKNVDAS+PD+QYK++NK T+KYLN VWG+++SAARWQM M+SDS
Sbjct: 242  GIGRSKTSPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDS 301

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             PLE EF +W+ E++R GGR P++Q+VLEK++AIQKA+T+VYSAATVKQMLQEKKSAS+R
Sbjct: 302  VPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTR 361

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRRE++IA+S+ D  EVERIRARL ELE+SRQ+K KD KAL+LAEMN+KN
Sbjct: 362  PLNVAAEKDRLRRELEIAQSKHDEAEVERIRARLQELEASRQAKQKDAKALKLAEMNRKN 421

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPNXXXXXXXXXXXXXXXXXX 345
            R ENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYY                     
Sbjct: 422  RFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAK------------------ 463

Query: 344  XXXXXXGSGSN-----XXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLI 180
                   +G+N                          VDT+APVD GTESN LHNF+L I
Sbjct: 464  -PGEKAAAGNNSVNVTAEAGMVATAAALEAAADAGKLVDTSAPVDQGTESNMLHNFELPI 522

Query: 179  SLTELQKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
            SL  LQK            ARKQRIE+TVG RV ENDGRRHSLTL+VSDYKRRRGLL
Sbjct: 523  SLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKRRRGLL 579


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max] gi|947071604|gb|KRH20495.1| hypothetical protein
            GLYMA_13G182500 [Glycine max]
          Length = 656

 Score =  426 bits (1095), Expect = e-116
 Identities = 224/352 (63%), Positives = 259/352 (73%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K   IYRLCMVKNVDAS+PD+QYK++NK T+KYLN VWG+++SAARWQM M+SDS
Sbjct: 305  GIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDS 364

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             P+E EF +W+ E++  GGR PS+Q+VLEK++AIQKA+T+VYSAATVKQMLQEKKSAS+R
Sbjct: 365  APMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTR 424

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRRE++IA+S+ D  EVERI+ RL ELE+SRQ+K KD KAL+LAEMN+KN
Sbjct: 425  PLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKLAEMNRKN 484

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPNXXXXXXXXXXXXXXXXXX 345
            R ENFKNASELKPVN GLKAGEAGYDPFSRRWTRSRNYY                     
Sbjct: 485  RFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNIVNGNVAG 544

Query: 344  XXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLTEL 165
                  G+                        VDT+APVD GTESN LHNF+L ISL  L
Sbjct: 545  AGSNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFELPISLALL 604

Query: 164  QKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
            QK            ARKQRIE+TVG RV ENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 605  QKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha
            curcas] gi|643703874|gb|KDP20938.1| hypothetical protein
            JCGZ_21409 [Jatropha curcas]
          Length = 658

 Score =  426 bits (1094), Expect = e-116
 Identities = 218/352 (61%), Positives = 264/352 (75%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K+  IYRLC+V+NVDA+DPD+ YK++NK T+KYLN +WG+++SAARWQM M+SDS
Sbjct: 307  GIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQMAMVSDS 366

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             P E E+ +W+ E+ER GGR P++Q++LEK+EAI+K+ T+VYSAATVKQMLQEKKSAS+R
Sbjct: 367  APTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQEKKSASTR 426

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRRE+++A+ ++D  EVERIRAR+ ELE+SRQ++ KD KA+RLAEMN+KN
Sbjct: 427  PLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIRLAEMNRKN 486

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPNXXXXXXXXXXXXXXXXXX 345
            RAENF+NASELKPVNT LKAGEAGYDPFSRRWTRSRNYYV                    
Sbjct: 487  RAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAAEANNNGTAAV 546

Query: 344  XXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLTEL 165
                   +G+                      VDT APVD GTESN+LH+FDL ISLT L
Sbjct: 547  AHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHDFDLPISLTAL 606

Query: 164  QKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
            +K            ARKQ+IEATVG RVPENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 607  EKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 658


>gb|KHN13191.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
          Length = 646

 Score =  425 bits (1093), Expect = e-116
 Identities = 227/352 (64%), Positives = 262/352 (74%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K   IYRLCMVKNVDAS+PD+QYK++NK T+KYLN VWG+++SAARWQM M+SDS
Sbjct: 305  GIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDS 364

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             P+E EF +W+ E++  GGR PS+Q+VLEK++AIQKA+T+VYSAATVKQMLQEKKSAS+R
Sbjct: 365  APIEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTR 424

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRRE++IA+S+ D  EVERI+ RL ELE+SRQ+K KD KAL+LAEMN+KN
Sbjct: 425  PLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKLAEMNRKN 484

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPNXXXXXXXXXXXXXXXXXX 345
            R ENFKNASELKPVN GLKAGEAGYDPFSRRWTRSRNYY                     
Sbjct: 485  RFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAK-------PGEKAAAGNNI 537

Query: 344  XXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLTEL 165
                  G+GSN                     VDT+APVD GTESN LHNF+L ISL  L
Sbjct: 538  VNGNVAGAGSN---GTGAPVTVEAGMVAIAAAVDTSAPVDQGTESNMLHNFELPISLALL 594

Query: 164  QKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
            QK            ARKQRIE+TVG RV ENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 595  QKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 646


>gb|KHN10031.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
          Length = 646

 Score =  425 bits (1093), Expect = e-116
 Identities = 227/352 (64%), Positives = 262/352 (74%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K   IYRLCMVKNVDAS+PD+QYK++NK T+KYLN VWG+++SAARWQM M+SDS
Sbjct: 305  GIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDS 364

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             P+E EF +W+ E++  GGR PS+Q+VLEK++AIQKA+T+VYSAATVKQMLQEKKSAS+R
Sbjct: 365  APIEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTR 424

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRRE++IA+S+ D  EVERI+ RL ELE+SRQ+K KD KAL+LAEMN+KN
Sbjct: 425  PLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKLAEMNRKN 484

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPNXXXXXXXXXXXXXXXXXX 345
            R ENFKNASELKPVN GLKAGEAGYDPFSRRWTRSRNYY                     
Sbjct: 485  RFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAK-------PGEKAAAGNNI 537

Query: 344  XXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLTEL 165
                  G+GSN                     VDT+APVD GTESN LHNF+L ISL  L
Sbjct: 538  VNGNVAGAGSN---GTGAPVTVEAGMVAIAAAVDTSAPVDQGTESNMLHNFELPISLALL 594

Query: 164  QKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
            QK            ARKQRIE+TVG RV ENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 595  QKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 646


>gb|KHN07280.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
          Length = 646

 Score =  425 bits (1093), Expect = e-116
 Identities = 227/352 (64%), Positives = 262/352 (74%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K   IYRLCMVKNVDAS+PD+QYK++NK T+KYLN VWG+++SAARWQM M+SDS
Sbjct: 305  GIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDS 364

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             P+E EF +W+ E++  GGR PS+Q+VLEK++AIQKA+T+VYSAATVKQMLQEKKSAS+R
Sbjct: 365  APIEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTR 424

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRRE++IA+S+ D  EVERI+ RL ELE+SRQ+K KD KAL+LAEMN+KN
Sbjct: 425  PLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKLAEMNRKN 484

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPNXXXXXXXXXXXXXXXXXX 345
            R ENFKNASELKPVN GLKAGEAGYDPFSRRWTRSRNYY                     
Sbjct: 485  RFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAK-------PGEKAAAGNNI 537

Query: 344  XXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLTEL 165
                  G+GSN                     VDT+APVD GTESN LHNF+L ISL  L
Sbjct: 538  VNGNVAGAGSN---GTGAPVTVEAGMVAIAAAVDTSAPVDQGTESNMLHNFELPISLALL 594

Query: 164  QKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
            QK            ARKQRIE+TVG RV ENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 595  QKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 646


>ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nelumbo
            nucifera]
          Length = 666

 Score =  425 bits (1093), Expect = e-116
 Identities = 227/355 (63%), Positives = 263/355 (74%), Gaps = 3/355 (0%)
 Frame = -1

Query: 1064 GIGRKKN-MAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISD 888
            GIG  ++  +IYRLCMVKNVDA+DP+KQYK++N+ T+KYLNC+WG+++SAARWQM  +SD
Sbjct: 312  GIGMSRSGQSIYRLCMVKNVDATDPNKQYKLENRTTYKYLNCIWGNESSAARWQMARVSD 371

Query: 887  SPPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASS 708
            S PL  EFN+W+ E+ER GGR P++Q+V EK+EAIQK  T+VYSAATVKQMLQEKK+ASS
Sbjct: 372  SAPLVEEFNDWLREVERHGGRMPTKQDVSEKREAIQKTNTFVYSAATVKQMLQEKKTASS 431

Query: 707  RPLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELES-SRQSKLKDTKALRLAEMNK 531
            RPLN+AAEK+RLRREM++AESRRD  EVERIRARL ELE+ SRQ+K KD+KA+RLAEMNK
Sbjct: 432  RPLNIAAEKERLRREMEVAESRRDEAEVERIRARLQELEAMSRQAKEKDSKAVRLAEMNK 491

Query: 530  KNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPNXXXXXXXXXXXXXXXX 351
            +NRAENFKNASELKPVNT LKAGEAGYDPFSRRWTRSRNYYV                  
Sbjct: 492  RNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGEGAPTANGEAAVAS 551

Query: 350  XXXXXXXXGSG-SNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISL 174
                        +                      VDT+APVD GTESNSLH+F+L ISL
Sbjct: 552  AVSVASSGTGARAAAEAGIAATAAALEAAAGAGKLVDTSAPVDQGTESNSLHDFELPISL 611

Query: 173  TELQKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
              LQK             RKQRIEATVG RVPENDGRRHSLTLTVSDYKRRRGLL
Sbjct: 612  AGLQKFGGPQGAHLGFLGRKQRIEATVGCRVPENDGRRHSLTLTVSDYKRRRGLL 666


>ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
            gi|561032714|gb|ESW31293.1| hypothetical protein
            PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  425 bits (1092), Expect = e-116
 Identities = 224/352 (63%), Positives = 260/352 (73%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K   IYRLCMVKNVDAS+PD+QYK++NK T+KYLN VWG+++SAARWQM M+SDS
Sbjct: 306  GIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDS 365

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             PLE EF +W+ E++R GGR P++Q+VLEK++AIQKA+T+VYSAATVKQMLQEKKSAS+R
Sbjct: 366  APLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTR 425

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRRE++IA+S+ D  EV+RI+ARL ELE+SR +K KD KAL+LAEMN+KN
Sbjct: 426  PLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAKQKDAKALKLAEMNRKN 485

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPNXXXXXXXXXXXXXXXXXX 345
            R ENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYY                     
Sbjct: 486  RFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYTGEKAAAGNNSVNGIVAGPGT 545

Query: 344  XXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLTEL 165
                   +                        VDT+APVD GTESN LHNF+L ISL  L
Sbjct: 546  NSTGAPVTAE---AGLVATAAALEAAADAGKLVDTSAPVDQGTESNMLHNFELPISLALL 602

Query: 164  QKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
            QK            ARKQRIE+TVG RV ENDGRRHSLTL+VSDYKRRRGLL
Sbjct: 603  QKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKRRRGLL 654


>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|550327599|gb|EEE97240.2| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 664

 Score =  424 bits (1091), Expect = e-116
 Identities = 222/355 (62%), Positives = 260/355 (73%), Gaps = 3/355 (0%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K   +YRLCMV+NVDA++PDK YK++NK T+KYLN  WG+D+SAARWQM M+SDS
Sbjct: 310  GIGRSKTGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADSSAARWQMAMVSDS 369

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             P E E+ +W+ E ER GGR PS+Q++LEK+EAI+K+ T+VYSAATVKQMLQEKKSASSR
Sbjct: 370  APTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQMLQEKKSASSR 429

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRRE++IA+SR D  EVERI AR+LELE+SRQ+K+KD KALRLAEMN+KN
Sbjct: 430  PLNVAAEKDRLRRELEIAQSRHDEAEVERIEARILELEASRQAKVKDAKALRLAEMNRKN 489

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPN---XXXXXXXXXXXXXXX 354
            R ENF+NASELKP+NTGLKAGEAGYDPFSRRWTRSRNYYV N                  
Sbjct: 490  RVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYVSNPAGGDDAVAASNSEANDT 549

Query: 353  XXXXXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISL 174
                      +G+                      VDT+APVD GTESN++HNF+L ISL
Sbjct: 550  AAVADSDHVVAGAMSESGVAATAAALDAAADAGKLVDTSAPVDQGTESNTMHNFELEISL 609

Query: 173  TELQKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
              LQK            ARKQRIEA VG +V ENDGRRH+LTLTV DYKRRRGLL
Sbjct: 610  IALQKFRGPQGAHAGFMARKQRIEANVGCQVRENDGRRHALTLTVGDYKRRRGLL 664


>ref|XP_011047833.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X2
            [Populus euphratica] gi|743908750|ref|XP_011047834.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Populus euphratica]
            gi|743908752|ref|XP_011047836.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog isoform X2
            [Populus euphratica]
          Length = 666

 Score =  423 bits (1088), Expect = e-115
 Identities = 221/355 (62%), Positives = 260/355 (73%), Gaps = 3/355 (0%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K   +YRLCMV+NVDA++PDK YK++NK T KYLN  WG+D+SAARWQM M+SDS
Sbjct: 312  GIGRSKTGPVYRLCMVRNVDAAEPDKPYKLENKSTFKYLNVTWGADSSAARWQMAMVSDS 371

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             P E E+ +W+ E ER GGR PS+Q++LEK+EAI+K+ T+VYSAATVKQMLQEKKSASSR
Sbjct: 372  APTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQMLQEKKSASSR 431

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRRE++IA+S+ D  EVERI AR+LELE+SRQ+K+KD KA+RLAEMN+KN
Sbjct: 432  PLNVAAEKDRLRRELEIAQSKHDEAEVERIEARILELEASRQAKVKDAKAIRLAEMNRKN 491

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPN---XXXXXXXXXXXXXXX 354
            R ENF+NASELKP+NTGLKAGEAGYDPFSRRWTRSRNYYV N                  
Sbjct: 492  RVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYVSNPAGGADAAAASNSEANDT 551

Query: 353  XXXXXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISL 174
                      +G+                      VDT+APVD GTESN++HNF+L ISL
Sbjct: 552  AAVADSHHVVAGAMSVSGVAATAAALDAAADAGKLVDTSAPVDQGTESNTMHNFELEISL 611

Query: 173  TELQKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
              LQK            ARKQRIEATVG +V ENDGRRH+LTLTV DYKRRRGLL
Sbjct: 612  IALQKFRGPQGAHAGFMARKQRIEATVGCQVRENDGRRHALTLTVGDYKRRRGLL 666


>ref|XP_011047832.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Populus euphratica]
          Length = 695

 Score =  423 bits (1088), Expect = e-115
 Identities = 221/355 (62%), Positives = 260/355 (73%), Gaps = 3/355 (0%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K   +YRLCMV+NVDA++PDK YK++NK T KYLN  WG+D+SAARWQM M+SDS
Sbjct: 341  GIGRSKTGPVYRLCMVRNVDAAEPDKPYKLENKSTFKYLNVTWGADSSAARWQMAMVSDS 400

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             P E E+ +W+ E ER GGR PS+Q++LEK+EAI+K+ T+VYSAATVKQMLQEKKSASSR
Sbjct: 401  APTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQMLQEKKSASSR 460

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRRE++IA+S+ D  EVERI AR+LELE+SRQ+K+KD KA+RLAEMN+KN
Sbjct: 461  PLNVAAEKDRLRRELEIAQSKHDEAEVERIEARILELEASRQAKVKDAKAIRLAEMNRKN 520

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPN---XXXXXXXXXXXXXXX 354
            R ENF+NASELKP+NTGLKAGEAGYDPFSRRWTRSRNYYV N                  
Sbjct: 521  RVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYVSNPAGGADAAAASNSEANDT 580

Query: 353  XXXXXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISL 174
                      +G+                      VDT+APVD GTESN++HNF+L ISL
Sbjct: 581  AAVADSHHVVAGAMSVSGVAATAAALDAAADAGKLVDTSAPVDQGTESNTMHNFELEISL 640

Query: 173  TELQKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
              LQK            ARKQRIEATVG +V ENDGRRH+LTLTV DYKRRRGLL
Sbjct: 641  IALQKFRGPQGAHAGFMARKQRIEATVGCQVRENDGRRHALTLTVGDYKRRRGLL 695


>ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
            RTF1 homolog [Prunus mume]
          Length = 648

 Score =  423 bits (1088), Expect = e-115
 Identities = 221/354 (62%), Positives = 259/354 (73%), Gaps = 2/354 (0%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K+  IYRLCMV+NVDASDPD++YK++NK THKYLN VWG++NSAARWQM MISDS
Sbjct: 295  GIGRSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAARWQMAMISDS 354

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             P+E EF +W+ E+ER GGR PS+Q+VLEK+EAI+K  T+VYSAATVKQM++EKKSASSR
Sbjct: 355  APVEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQMIEEKKSASSR 414

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLN+A EKDRLRRE+++A+S+ D  EV+RI+ RL +LE+ RQS+ KD+KA+RLAEMN+KN
Sbjct: 415  PLNIALEKDRLRRELEVAQSKHDDAEVDRIKTRLQQLEARRQSQGKDSKAVRLAEMNRKN 474

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYV--PNXXXXXXXXXXXXXXXX 351
            R ENFKNASELKPV TGLKAGEAGYDPFSRRWTRSRNYYV  P                 
Sbjct: 475  RVENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKGEAEAIVDADGAL 534

Query: 350  XXXXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLT 171
                                              +DT+APVD GTESN +HNF+L ISL 
Sbjct: 535  ADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLMHNFELPISLA 594

Query: 170  ELQKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
             LQK            ARKQRIEATVG RVPENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 595  TLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 648


>ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
            gi|462413781|gb|EMJ18830.1| hypothetical protein
            PRUPE_ppa002666mg [Prunus persica]
          Length = 646

 Score =  423 bits (1088), Expect = e-115
 Identities = 222/354 (62%), Positives = 258/354 (72%), Gaps = 2/354 (0%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K+  IYRLCMV+NVDASDPD++YK++NK THKYLN VWG++NSAARWQM MISDS
Sbjct: 293  GIGRSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAARWQMAMISDS 352

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             PLE EF +W+ E+ER GGR PS+Q+VLEK+EAI+K  T+VYSAATVKQM++EKKSASSR
Sbjct: 353  APLEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQMIEEKKSASSR 412

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLN+A EKDRLRRE+++A+S+ D  EVERI+ RL +LE+ RQS+ KD+KA+RLAEMN+KN
Sbjct: 413  PLNIALEKDRLRRELEVAQSKHDDAEVERIKTRLQQLEARRQSQGKDSKAVRLAEMNRKN 472

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYV--PNXXXXXXXXXXXXXXXX 351
            R ENFKNASELKPV TGLKAGEAGYDPFSRRWTRSRNYYV  P                 
Sbjct: 473  RVENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKGEAEAIVDADGAL 532

Query: 350  XXXXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLT 171
                                              +DT+APVD GTESN +HNF+L ISL 
Sbjct: 533  ADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLMHNFELPISLA 592

Query: 170  ELQKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
             LQK            ARKQRIEATVG RVPENDGRRH+LTLTVSDYKRR GLL
Sbjct: 593  TLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 646


>ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pyrus x
            bretschneideri]
          Length = 657

 Score =  422 bits (1086), Expect = e-115
 Identities = 222/354 (62%), Positives = 259/354 (73%), Gaps = 2/354 (0%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K+ AIYRLCMV+NVDASDPD+QYK++NK THKYLN VWG++NSAARWQM MISDS
Sbjct: 304  GIGRSKSGAIYRLCMVRNVDASDPDRQYKLENKTTHKYLNVVWGNENSAARWQMAMISDS 363

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             PLE EF +W+ E+ER GGR PS+++VLEK+EAI+K  ++VYSAATVKQM+QEKKSASSR
Sbjct: 364  APLEEEFKQWIREVERSGGRLPSKEDVLEKKEAIKKTNSFVYSAATVKQMIQEKKSASSR 423

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLN+A EKDRLRRE+++A+S++D  EVERI+ RL +LE+ RQS+ KD+KA+RLAEMN+KN
Sbjct: 424  PLNIALEKDRLRRELEVAKSKQDDAEVERIQTRLQQLEARRQSQGKDSKAIRLAEMNRKN 483

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYV--PNXXXXXXXXXXXXXXXX 351
            R ENFKNASELKP N GLKAGEAGYDPFSRRWTRSRNYYV  P                 
Sbjct: 484  RVENFKNASELKPKNIGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKEEAEAIAVADGAL 543

Query: 350  XXXXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLT 171
                                              +DT+APVD GTESN  HNF+L ISL 
Sbjct: 544  ADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLKHNFELPISLA 603

Query: 170  ELQKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
             LQK            ARKQRIEATVG +VPENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 604  ALQKFGGPQGAQKGFLARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 657


>ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Gossypium
            raimondii] gi|763802543|gb|KJB69481.1| hypothetical
            protein B456_011G025800 [Gossypium raimondii]
            gi|763802544|gb|KJB69482.1| hypothetical protein
            B456_011G025800 [Gossypium raimondii]
            gi|763802545|gb|KJB69483.1| hypothetical protein
            B456_011G025800 [Gossypium raimondii]
          Length = 660

 Score =  422 bits (1085), Expect = e-115
 Identities = 226/353 (64%), Positives = 261/353 (73%), Gaps = 1/353 (0%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K  AIYRLCMV+NVDA+DPD+ YK++NK T+KYLN VWG+++SAARWQM MISDS
Sbjct: 308  GIGRSKTGAIYRLCMVRNVDATDPDRTYKLENKTTYKYLNVVWGNESSAARWQMAMISDS 367

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
            PPLE EF + + E+ER GGR PS+Q+VLEK+EA+QKA T+VYSAATVKQMLQEKKS+SSR
Sbjct: 368  PPLEEEFRQLIREVERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQEKKSSSSR 427

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRR+++IA+S+ D  EVERI+ RL +LE+SRQS+ KD KA+RLAEMN+KN
Sbjct: 428  PLNVAAEKDRLRRDLEIAQSKHDDVEVERIKKRLQQLEASRQSQEKDAKAVRLAEMNRKN 487

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPNXXXXXXXXXXXXXXXXXX 345
            R ENFKNAS LKPVNTGLKAGEAGYDPFSRRWTRSRNYY                     
Sbjct: 488  RVENFKNASGLKPVNTGLKAGEAGYDPFSRRWTRSRNYYNAKAPGGDAAAVANGDTNGAI 547

Query: 344  XXXXXXGSG-SNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLTE 168
                   +G +                      VDTNAPVD GTESN LH+F+L ISL  
Sbjct: 548  GSGNGNDAGAAAAEAGRAATAAALQEAAGAGKLVDTNAPVDEGTESNMLHDFELPISLDV 607

Query: 167  LQKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
            L+K            ARKQRIEATVG RVPENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 608  LRKFGGHEGAVAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 660


>ref|XP_008382360.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Malus
            domestica]
          Length = 657

 Score =  422 bits (1085), Expect = e-115
 Identities = 222/354 (62%), Positives = 258/354 (72%), Gaps = 2/354 (0%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K+ AIYRLCMV+NVDASDPD+QYK++NK THKYLN VWG++NSAARWQM MISDS
Sbjct: 304  GIGRSKSGAIYRLCMVRNVDASDPDRQYKLENKTTHKYLNVVWGNENSAARWQMAMISDS 363

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
             PLE EF +W+ E+ER GGR PS+++VLEK+EAI+K  ++VYSAATVKQM+QEKKSASSR
Sbjct: 364  APLEEEFKQWIREVERSGGRLPSKEDVLEKKEAIKKTNSFVYSAATVKQMIQEKKSASSR 423

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLN+A EKDRLRRE+++A+S++D  EVERI  RL +LE+ RQS+ KD+KA+RLAEMN+KN
Sbjct: 424  PLNIALEKDRLRRELEVAKSKQDDAEVERIETRLQQLEARRQSQGKDSKAIRLAEMNRKN 483

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYV--PNXXXXXXXXXXXXXXXX 351
            R ENFKNASELKP N GLKAGEAGYDPFSRRWTRSRNYYV  P                 
Sbjct: 484  RVENFKNASELKPKNIGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKEEAEAIAVADGAL 543

Query: 350  XXXXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLT 171
                                              +DT+APVD GTESN  HNF+L ISL 
Sbjct: 544  ADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLKHNFELPISLA 603

Query: 170  ELQKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
             LQK            ARKQRIEATVG +VPENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 604  ALQKFGGPQGAQKGFLARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 657


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
            gi|557524836|gb|ESR36142.1| hypothetical protein
            CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score =  421 bits (1083), Expect = e-115
 Identities = 220/352 (62%), Positives = 258/352 (73%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR KN  IYRLCMV+NVDA++PD+ YK++N+ T KYLN  WG+++SAARWQM M+SDS
Sbjct: 294  GIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDS 353

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
            PPLE EF +W+ E+ER GGR PS+Q+VLEK+E+IQK  T+VYSAATVKQMLQEKKSASSR
Sbjct: 354  PPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSR 413

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLNVAAEKDRLRRE+++A+SR D  ++ERI+ RL ELE+SR SK+KD KA+RLAEMN+KN
Sbjct: 414  PLNVAAEKDRLRRELEVAQSRHDDVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKN 473

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPNXXXXXXXXXXXXXXXXXX 345
            R ENFKNASELK VNT LKAGEAGYDPFSRRWTRSRNYY+                    
Sbjct: 474  RVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISK--PGEEVTAEANGDKNGV 531

Query: 344  XXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLTEL 165
                    G+                      VDTNAP+DLGTESN LH+F+L ISL  L
Sbjct: 532  PGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNAL 591

Query: 164  QKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
            +K            ARKQRIEATVG +VPENDGRRH+LTLTV DYKRRRGLL
Sbjct: 592  KKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao]
            gi|590624750|ref|XP_007025692.1| PAF1 complex component
            isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1|
            PAF1 complex component isoform 1 [Theobroma cacao]
            gi|508781058|gb|EOY28314.1| PAF1 complex component
            isoform 1 [Theobroma cacao]
          Length = 660

 Score =  421 bits (1083), Expect = e-115
 Identities = 220/352 (62%), Positives = 261/352 (74%)
 Frame = -1

Query: 1064 GIGRKKNMAIYRLCMVKNVDASDPDKQYKMDNKYTHKYLNCVWGSDNSAARWQMIMISDS 885
            GIGR K+  IYRLCMV+NVDA++P++ YK++NK T+KYLN VWG+++SAARWQM MISDS
Sbjct: 309  GIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARWQMAMISDS 368

Query: 884  PPLESEFNEWMDELERKGGRKPSRQEVLEKQEAIQKALTYVYSAATVKQMLQEKKSASSR 705
            PP E EF + + ELER GGR PS+Q+VLEK+EA+QKA T+VYSAATVKQMLQEKKS SSR
Sbjct: 369  PPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQEKKSTSSR 428

Query: 704  PLNVAAEKDRLRREMDIAESRRDMGEVERIRARLLELESSRQSKLKDTKALRLAEMNKKN 525
            PLN+AAEKDRLRR+++IA+S+ D  EVERI+ RL +LE+SRQ++ KD KA+RLAEMN+KN
Sbjct: 429  PLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVRLAEMNRKN 488

Query: 524  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVPNXXXXXXXXXXXXXXXXXX 345
            RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYV                    
Sbjct: 489  RAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVANGDRIGVI 548

Query: 344  XXXXXXGSGSNXXXXXXXXXXXXXXXXXXXXXVDTNAPVDLGTESNSLHNFDLLISLTEL 165
                   + +                      VDT+APVD GTESN LH+F++ ISL  L
Sbjct: 549  ASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHDFEIPISLNAL 608

Query: 164  QKXXXXXXXXXXXXARKQRIEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 9
            Q+            ARKQRIEATVG +VPENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 609  QRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 660