BLASTX nr result
ID: Papaver29_contig00022057
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00022057
(485 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KOM57044.1| hypothetical protein LR48_Vigan11g007600 [Vigna a... 45 2e-08
ref|XP_009380028.1| PREDICTED: probable U6 snRNA-associated Sm-l... 42 2e-07
ref|XP_012077075.1| PREDICTED: sm-like protein LSM1B [Jatropha c... 43 3e-07
ref|XP_014516657.1| PREDICTED: sm-like protein LSM1B [Vigna radi... 42 4e-07
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275... 42 4e-07
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri... 42 4e-07
ref|XP_010939893.1| PREDICTED: probable U6 snRNA-associated Sm-l... 41 4e-07
ref|XP_010937317.1| PREDICTED: probable U6 snRNA-associated Sm-l... 41 4e-07
ref|XP_008802479.1| PREDICTED: U6 snRNA-associated Sm-like prote... 41 4e-07
ref|XP_008782743.1| PREDICTED: probable U6 snRNA-associated Sm-l... 41 4e-07
ref|XP_006836602.1| PREDICTED: sm-like protein LSM1B [Amborella ... 41 4e-07
gb|ABK22805.1| unknown [Picea sitchensis] 41 5e-07
ref|XP_010061830.1| PREDICTED: U6 snRNA-associated Sm-like prote... 42 5e-07
ref|XP_008242261.1| PREDICTED: U6 snRNA-associated Sm-like prote... 42 5e-07
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote... 42 5e-07
ref|XP_010041873.1| PREDICTED: U6 snRNA-associated Sm-like prote... 42 5e-07
ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|2235447... 43 6e-07
ref|XP_009390858.1| PREDICTED: probable U6 snRNA-associated Sm-l... 43 8e-07
ref|XP_012068855.1| PREDICTED: sm-like protein LSM1B [Jatropha c... 41 8e-07
ref|XP_012481954.1| PREDICTED: sm-like protein LSM1B [Gossypium ... 42 1e-06
>gb|KOM57044.1| hypothetical protein LR48_Vigan11g007600 [Vigna angularis]
Length = 148
Score = 45.1 bits (105), Expect(2) = 2e-08
Identities = 26/42 (61%), Positives = 28/42 (66%)
Frame = -2
Query: 127 IAEKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+ EKLLVLLRD +KLMGILRSFDQF AN VLE
Sbjct: 39 VVEKLLVLLRDGRKLMGILRSFDQF-----------ANAVLE 69
Score = 40.0 bits (92), Expect(2) = 2e-08
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLDS 132
MSW G EDI+LSTSLASYLDS
Sbjct: 1 MSWAGPEDIYLSTSLASYLDS 21
>ref|XP_009380028.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1 [Musa
acuminata subsp. malaccensis]
Length = 128
Score = 42.4 bits (98), Expect(2) = 2e-07
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KL+G+LRSFDQF ANVVLE
Sbjct: 21 KKLLVLLRDGRKLLGVLRSFDQF-----------ANVVLE 49
Score = 39.7 bits (91), Expect(2) = 2e-07
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G EDIFLSTSLASYLD
Sbjct: 1 MSWAGPEDIFLSTSLASYLD 20
>ref|XP_012077075.1| PREDICTED: sm-like protein LSM1B [Jatropha curcas]
Length = 128
Score = 42.7 bits (99), Expect(2) = 3e-07
Identities = 25/40 (62%), Positives = 28/40 (70%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KL+GILRSFDQF ANVVLE
Sbjct: 21 KKLLVLLRDGRKLLGILRSFDQF-----------ANVVLE 49
Score = 38.5 bits (88), Expect(2) = 3e-07
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G +DIFLSTSLASYLD
Sbjct: 1 MSWAGPDDIFLSTSLASYLD 20
>ref|XP_014516657.1| PREDICTED: sm-like protein LSM1B [Vigna radiata var. radiata]
Length = 128
Score = 42.4 bits (98), Expect(2) = 4e-07
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KLMGILRSFDQF AN VLE
Sbjct: 21 KKLLVLLRDGRKLMGILRSFDQF-----------ANAVLE 49
Score = 38.5 bits (88), Expect(2) = 4e-07
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G EDI+LSTSLASYLD
Sbjct: 1 MSWAGPEDIYLSTSLASYLD 20
>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 42.4 bits (98), Expect(2) = 4e-07
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KLMGILRSFDQF AN VLE
Sbjct: 21 KKLLVLLRDGRKLMGILRSFDQF-----------ANAVLE 49
Score = 38.5 bits (88), Expect(2) = 4e-07
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G EDI+LSTSLASYLD
Sbjct: 1 MSWAGPEDIYLSTSLASYLD 20
>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|222841552|gb|EEE79099.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 42.4 bits (98), Expect(2) = 4e-07
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KLMGILRSFDQF AN VLE
Sbjct: 21 KKLLVLLRDGRKLMGILRSFDQF-----------ANAVLE 49
Score = 38.5 bits (88), Expect(2) = 4e-07
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G EDI+LSTSLASYLD
Sbjct: 1 MSWAGPEDIYLSTSLASYLD 20
>ref|XP_010939893.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
[Elaeis guineensis]
Length = 128
Score = 41.2 bits (95), Expect(2) = 4e-07
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KL+GILRSFDQF AN VLE
Sbjct: 21 KKLLVLLRDGRKLLGILRSFDQF-----------ANAVLE 49
Score = 39.7 bits (91), Expect(2) = 4e-07
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G EDIFLSTSLASYLD
Sbjct: 1 MSWAGPEDIFLSTSLASYLD 20
>ref|XP_010937317.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
[Elaeis guineensis]
Length = 128
Score = 41.2 bits (95), Expect(2) = 4e-07
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KL+GILRSFDQF AN VLE
Sbjct: 21 KKLLVLLRDGRKLLGILRSFDQF-----------ANAVLE 49
Score = 39.7 bits (91), Expect(2) = 4e-07
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G EDIFLSTSLASYLD
Sbjct: 1 MSWAGPEDIFLSTSLASYLD 20
>ref|XP_008802479.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Phoenix
dactylifera] gi|672165170|ref|XP_008802480.1| PREDICTED:
U6 snRNA-associated Sm-like protein LSm1 [Phoenix
dactylifera] gi|672165172|ref|XP_008802481.1| PREDICTED:
U6 snRNA-associated Sm-like protein LSm1 [Phoenix
dactylifera]
Length = 128
Score = 41.2 bits (95), Expect(2) = 4e-07
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KL+GILRSFDQF AN VLE
Sbjct: 21 KKLLVLLRDGRKLLGILRSFDQF-----------ANAVLE 49
Score = 39.7 bits (91), Expect(2) = 4e-07
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G EDIFLSTSLASYLD
Sbjct: 1 MSWAGPEDIFLSTSLASYLD 20
>ref|XP_008782743.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
[Phoenix dactylifera]
Length = 128
Score = 41.2 bits (95), Expect(2) = 4e-07
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KL+GILRSFDQF AN VLE
Sbjct: 21 KKLLVLLRDGRKLLGILRSFDQF-----------ANAVLE 49
Score = 39.7 bits (91), Expect(2) = 4e-07
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G EDIFLSTSLASYLD
Sbjct: 1 MSWAGPEDIFLSTSLASYLD 20
>ref|XP_006836602.1| PREDICTED: sm-like protein LSM1B [Amborella trichopoda]
gi|548839141|gb|ERM99455.1| hypothetical protein
AMTR_s00131p00107350 [Amborella trichopoda]
Length = 128
Score = 41.2 bits (95), Expect(2) = 4e-07
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KL+GILRSFDQF AN VLE
Sbjct: 21 KKLLVLLRDGRKLLGILRSFDQF-----------ANAVLE 49
Score = 39.7 bits (91), Expect(2) = 4e-07
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G EDIFLSTSLASYLD
Sbjct: 1 MSWAGPEDIFLSTSLASYLD 20
>gb|ABK22805.1| unknown [Picea sitchensis]
Length = 172
Score = 40.8 bits (94), Expect(2) = 5e-07
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KL+GILRSFDQF AN VLE
Sbjct: 65 KKLLVLLRDGRKLIGILRSFDQF-----------ANAVLE 93
Score = 39.7 bits (91), Expect(2) = 5e-07
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G EDIFLSTSLASYLD
Sbjct: 45 MSWAGPEDIFLSTSLASYLD 64
>ref|XP_010061830.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Eucalyptus
grandis] gi|629103389|gb|KCW68858.1| hypothetical
protein EUGRSUZ_F02453 [Eucalyptus grandis]
gi|629103390|gb|KCW68859.1| hypothetical protein
EUGRSUZ_F02453 [Eucalyptus grandis]
Length = 128
Score = 42.4 bits (98), Expect(2) = 5e-07
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KLMGILRSFDQF AN VLE
Sbjct: 21 KKLLVLLRDGRKLMGILRSFDQF-----------ANAVLE 49
Score = 38.1 bits (87), Expect(2) = 5e-07
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G ED++LSTSLASYLD
Sbjct: 1 MSWAGPEDVYLSTSLASYLD 20
>ref|XP_008242261.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Prunus mume]
Length = 128
Score = 42.0 bits (97), Expect(2) = 5e-07
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KL+G+LRSFDQF ANVVLE
Sbjct: 21 KKLLVLLRDGRKLLGLLRSFDQF-----------ANVVLE 49
Score = 38.5 bits (88), Expect(2) = 5e-07
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G+ED FLSTSLASYLD
Sbjct: 1 MSWAGAEDTFLSTSLASYLD 20
>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera] gi|147803430|emb|CAN62239.1| hypothetical
protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product
[Vitis vinifera]
Length = 128
Score = 42.0 bits (97), Expect(2) = 5e-07
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD++KL+GILRSFDQF AN VLE
Sbjct: 21 KKLLVLLRDNRKLLGILRSFDQF-----------ANAVLE 49
Score = 38.5 bits (88), Expect(2) = 5e-07
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G EDI+LSTSLASYLD
Sbjct: 1 MSWAGPEDIYLSTSLASYLD 20
>ref|XP_010041873.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1, partial
[Eucalyptus grandis]
Length = 100
Score = 42.4 bits (98), Expect(2) = 5e-07
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KLMGILRSFDQF AN VLE
Sbjct: 21 KKLLVLLRDGRKLMGILRSFDQF-----------ANAVLE 49
Score = 38.1 bits (87), Expect(2) = 5e-07
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G ED++LSTSLASYLD
Sbjct: 1 MSWAGPEDVYLSTSLASYLD 20
>ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|223544736|gb|EEF46252.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 42.7 bits (99), Expect(2) = 6e-07
Identities = 25/40 (62%), Positives = 28/40 (70%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KL+GILRSFDQF ANVVLE
Sbjct: 21 KKLLVLLRDGRKLLGILRSFDQF-----------ANVVLE 49
Score = 37.4 bits (85), Expect(2) = 6e-07
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G +DIFLSTSLA+YLD
Sbjct: 1 MSWAGPDDIFLSTSLATYLD 20
>ref|XP_009390858.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1 [Musa
acuminata subsp. malaccensis]
Length = 128
Score = 42.7 bits (99), Expect(2) = 8e-07
Identities = 25/40 (62%), Positives = 28/40 (70%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KL+GILRSFDQF ANVVLE
Sbjct: 21 KKLLVLLRDGRKLLGILRSFDQF-----------ANVVLE 49
Score = 37.0 bits (84), Expect(2) = 8e-07
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G ED+ LSTSLASYLD
Sbjct: 1 MSWSGPEDVLLSTSLASYLD 20
>ref|XP_012068855.1| PREDICTED: sm-like protein LSM1B [Jatropha curcas]
gi|643733834|gb|KDP40677.1| hypothetical protein
JCGZ_24676 [Jatropha curcas]
Length = 128
Score = 41.2 bits (95), Expect(2) = 8e-07
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KL+GILRSFDQF AN VLE
Sbjct: 21 KKLLVLLRDGRKLLGILRSFDQF-----------ANAVLE 49
Score = 38.5 bits (88), Expect(2) = 8e-07
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G EDI+LSTSLASYLD
Sbjct: 1 MSWAGPEDIYLSTSLASYLD 20
>ref|XP_012481954.1| PREDICTED: sm-like protein LSM1B [Gossypium raimondii]
gi|728849887|gb|KHG29330.1| U6 snRNA-associated Sm-like
protein LSm1 [Gossypium arboreum]
gi|763739832|gb|KJB07331.1| hypothetical protein
B456_001G016100 [Gossypium raimondii]
Length = 128
Score = 42.0 bits (97), Expect(2) = 1e-06
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = -2
Query: 121 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLE 2
+KLLVLLRD +KL+G+LRSFDQF ANVVLE
Sbjct: 21 KKLLVLLRDGRKLLGLLRSFDQF-----------ANVVLE 49
Score = 37.4 bits (85), Expect(2) = 1e-06
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -1
Query: 194 MSWPGSEDIFLSTSLASYLD 135
MSW G +DIFLSTSLA+YLD
Sbjct: 1 MSWAGPDDIFLSTSLATYLD 20