BLASTX nr result

ID: Papaver29_contig00021977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00021977
         (549 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010255087.1| PREDICTED: thylakoidal processing peptidase ...    67   4e-09
ref|XP_002284120.1| PREDICTED: thylakoidal processing peptidase ...    61   4e-07

>ref|XP_010255087.1| PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like
           [Nelumbo nucifera]
          Length = 393

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 63/164 (38%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
 Frame = -1

Query: 549 LASSAGIRTGGNCRLFHELFGKSRNLIPNPKPDVD-----SSKNLQSDFAKFKYRNLPKK 385
           LASS GIRTG NCRLFHE  G+SR L  N K DVD     +++N ++DF +      PK 
Sbjct: 17  LASSVGIRTG-NCRLFHECCGRSRFLFSNQKSDVDPAAAAAARNYRADFKRSPTGCWPKA 75

Query: 384 PVSMYSSLAGDL--SGCSEFESPL--XXXXXXXXXXXXXXXXGVGILGVSSNXXXXXXXX 217
             S+Y+SL+GD     CS   SPL                  G+GI G+SS+        
Sbjct: 76  SASLYNSLSGDFVSDNCS---SPLVMGLISMMKSSACVSGSAGMGIFGISSS------SV 126

Query: 216 XXXXXXXXXSFIQGTTKKFFPSNEGLVKKEGLAIVDEVDDKGGT 85
                    +F QGT  K+ P NE     +G ++ +EV DKGGT
Sbjct: 127 LGFKASSLLTFFQGT--KWLPCNEFF---QG-SVSNEV-DKGGT 163


>ref|XP_002284120.1| PREDICTED: thylakoidal processing peptidase 1, chloroplastic [Vitis
           vinifera] gi|147810057|emb|CAN78280.1| hypothetical
           protein VITISV_021649 [Vitis vinifera]
          Length = 368

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 55/158 (34%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
 Frame = -1

Query: 549 LASSAGIRTGGNCRLFHELFGKSRNLIPNPKPDVDS---SKNLQSDFAKFKYRNLPKKPV 379
           LASSAGIR G NCR  HE + +SR   P+ KP+VDS   S+  Q+D+ + K     K   
Sbjct: 17  LASSAGIRVG-NCRSIHECWVRSRFFCPSQKPEVDSPVPSRAYQADYRRPKANCWAKVST 75

Query: 378 SMYSSLAGDLSGCSEFESPLXXXXXXXXXXXXXXXXGVGILGVSSNXXXXXXXXXXXXXX 199
           S YS+LAG++ G S     +                 VG+ GVS                
Sbjct: 76  SAYSTLAGEVFGDSCRNPLIVGLISLMKSSTGVSESSVGVFGVS-----------PLKAT 124

Query: 198 XXXSFIQGTTKKFFPSNEGLVKKEGLAIVDEVDDKGGT 85
               F+ G+  K+ P NE +    G    DEV DKGGT
Sbjct: 125 SILPFLPGS--KWLPCNEPIQGSVG----DEV-DKGGT 155


Top