BLASTX nr result
ID: Papaver29_contig00021548
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00021548
(429 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010482144.1| PREDICTED: 60S ribosomal protein L13a-4-like... 74 4e-11
ref|XP_010439646.1| PREDICTED: 60S ribosomal protein L13a-4 [Cam... 74 4e-11
ref|XP_006281111.1| hypothetical protein CARUB_v10027141mg [Caps... 74 4e-11
gb|ACN36734.1| unknown [Zea mays] gi|413933029|gb|AFW67580.1| hy... 74 6e-11
ref|NP_001281205.1| 60S ribosomal protein L13a [Zea mays] gi|223... 74 6e-11
gb|ACG48503.1| 60S ribosomal protein L13a [Zea mays] 74 6e-11
gb|ACG36118.1| 60S ribosomal protein L13a [Zea mays] 74 6e-11
ref|NP_001130808.1| uncharacterized LOC100191912 [Zea mays] gi|1... 74 6e-11
gb|ACF79169.1| unknown [Zea mays] gi|414872896|tpg|DAA51453.1| T... 74 6e-11
ref|XP_006298567.1| hypothetical protein CARUB_v10014649mg [Caps... 74 6e-11
gb|AFW67579.1| hypothetical protein ZEAMMB73_211853 [Zea mays] 74 6e-11
ref|XP_002466431.1| hypothetical protein SORBIDRAFT_01g007690 [S... 74 6e-11
ref|XP_004981725.1| PREDICTED: 60S ribosomal protein L13a-4 [Set... 73 7e-11
ref|NP_199687.1| 60S ribosomal protein L13a-4 [Arabidopsis thali... 73 9e-11
ref|XP_002882511.1| structural constituent of ribosome [Arabidop... 73 9e-11
ref|XP_002865669.1| 60S ribosomal protein L13A [Arabidopsis lyra... 73 9e-11
ref|XP_009374600.1| PREDICTED: 60S ribosomal protein L13a-4 [Pyr... 72 1e-10
ref|XP_008356990.1| PREDICTED: 60S ribosomal protein L13a-4 [Mal... 72 1e-10
ref|XP_008348430.1| PREDICTED: 60S ribosomal protein L13a-4 [Mal... 72 1e-10
pdb|3J61|O Chain O, Localization Of The Large Subunit Ribosomal ... 72 1e-10
>ref|XP_010482144.1| PREDICTED: 60S ribosomal protein L13a-4-like [Camelina sativa]
Length = 206
Score = 73.9 bits (180), Expect = 4e-11
Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSGICAKR+VVDARHHMLGRL+SITAK + R SG + ++
Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>ref|XP_010439646.1| PREDICTED: 60S ribosomal protein L13a-4 [Camelina sativa]
gi|727536432|ref|XP_010442327.1| PREDICTED: 60S
ribosomal protein L13a-4 [Camelina sativa]
Length = 206
Score = 73.9 bits (180), Expect = 4e-11
Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSGICAKR+VVDARHHMLGRL+SITAK + R SG + ++
Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>ref|XP_006281111.1| hypothetical protein CARUB_v10027141mg [Capsella rubella]
gi|482549815|gb|EOA14009.1| hypothetical protein
CARUB_v10027141mg [Capsella rubella]
Length = 206
Score = 73.9 bits (180), Expect = 4e-11
Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSGICAKR+VVDARHHMLGRL+SITAK + R SG + ++
Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>gb|ACN36734.1| unknown [Zea mays] gi|413933029|gb|AFW67580.1| hypothetical protein
ZEAMMB73_211853 [Zea mays]
Length = 179
Score = 73.6 bits (179), Expect = 6e-11
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSG+CAKRIVVDARHHMLGRLSSI AK + R SG + +L
Sbjct: 1 MVSGSGVCAKRIVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICMSGGLVRQKMKYL 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>ref|NP_001281205.1| 60S ribosomal protein L13a [Zea mays] gi|223943487|gb|ACN25827.1|
unknown [Zea mays] gi|413933030|gb|AFW67581.1| 60S
ribosomal protein L13a [Zea mays]
Length = 206
Score = 73.6 bits (179), Expect = 6e-11
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSG+CAKRIVVDARHHMLGRLSSI AK + R SG + +L
Sbjct: 1 MVSGSGVCAKRIVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICMSGGLVRQKMKYL 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>gb|ACG48503.1| 60S ribosomal protein L13a [Zea mays]
Length = 206
Score = 73.6 bits (179), Expect = 6e-11
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSG+CAKRIVVDARHHMLGRLSSI AK + R SG + +L
Sbjct: 1 MVSGSGVCAKRIVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICMSGGLVRQKMKYL 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>gb|ACG36118.1| 60S ribosomal protein L13a [Zea mays]
Length = 206
Score = 73.6 bits (179), Expect = 6e-11
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSG+CAKRIVVDARHHMLGRLSSI AK + R SG + +L
Sbjct: 1 MVSGSGVCAKRIVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICMSGGLVRQKMKYL 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>ref|NP_001130808.1| uncharacterized LOC100191912 [Zea mays] gi|195606206|gb|ACG24933.1|
60S ribosomal protein L13a [Zea mays]
Length = 206
Score = 73.6 bits (179), Expect = 6e-11
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSG+CAKRIVVDARHHMLGRLSSI AK + R SG + +L
Sbjct: 1 MVSGSGVCAKRIVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICMSGGLVRQKMKYL 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>gb|ACF79169.1| unknown [Zea mays] gi|414872896|tpg|DAA51453.1| TPA: ribosomal
protein L13A-like protein [Zea mays]
Length = 206
Score = 73.6 bits (179), Expect = 6e-11
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSG+CAKRIVVDARHHMLGRLSSI AK + R SG + +L
Sbjct: 1 MVSGSGVCAKRIVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICMSGGLVRQKMKYL 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>ref|XP_006298567.1| hypothetical protein CARUB_v10014649mg [Capsella rubella]
gi|482567276|gb|EOA31465.1| hypothetical protein
CARUB_v10014649mg [Capsella rubella]
Length = 206
Score = 73.6 bits (179), Expect = 6e-11
Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSGICAKR+VVDARHHMLGRL+SITAK + R SG + ++
Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLASITAKELLNGQKVVVVRCEEICLSGGLVRQKMKYM 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>gb|AFW67579.1| hypothetical protein ZEAMMB73_211853 [Zea mays]
Length = 127
Score = 73.6 bits (179), Expect = 6e-11
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSG+CAKRIVVDARHHMLGRLSSI AK + R SG + +L
Sbjct: 1 MVSGSGVCAKRIVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICMSGGLVRQKMKYL 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>ref|XP_002466431.1| hypothetical protein SORBIDRAFT_01g007690 [Sorghum bicolor]
gi|21326116|gb|AAM47582.1| putative 60S ribosomal
protein [Sorghum bicolor] gi|241920285|gb|EER93429.1|
hypothetical protein SORBIDRAFT_01g007690 [Sorghum
bicolor]
Length = 206
Score = 73.6 bits (179), Expect = 6e-11
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSG+CAKRIVVDARHHMLGRLSSI AK + R SG + +L
Sbjct: 1 MVSGSGVCAKRIVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICMSGGLVRQKMKYL 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>ref|XP_004981725.1| PREDICTED: 60S ribosomal protein L13a-4 [Setaria italica]
gi|944222644|gb|KQK87048.1| hypothetical protein
SETIT_037535mg [Setaria italica]
Length = 206
Score = 73.2 bits (178), Expect = 7e-11
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSG+CAKRIVVDARHHMLGRLSSI AK + R SG + +L
Sbjct: 1 MVSGSGVCAKRIVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICLSGGLVRQKMKYL 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>ref|NP_199687.1| 60S ribosomal protein L13a-4 [Arabidopsis thaliana]
gi|145334783|ref|NP_001078737.1| 60S ribosomal protein
L13a-4 [Arabidopsis thaliana]
gi|17865558|sp|Q9FKC0.1|R13A4_ARATH RecName: Full=60S
ribosomal protein L13a-4 gi|9758875|dbj|BAB09429.1| 60S
ribosomal protein L13a [Arabidopsis thaliana]
gi|19699305|gb|AAL91263.1| AT5g48760/K24G6_9
[Arabidopsis thaliana] gi|21593767|gb|AAM65734.1| 60S
ribosomal protein L13a [Arabidopsis thaliana]
gi|21689627|gb|AAM67435.1| At5g48760/K24G6_9
[Arabidopsis thaliana] gi|332008337|gb|AED95720.1| 60S
ribosomal protein L13a-4 [Arabidopsis thaliana]
gi|332008338|gb|AED95721.1| 60S ribosomal protein L13a-4
[Arabidopsis thaliana]
Length = 206
Score = 72.8 bits (177), Expect = 9e-11
Identities = 42/78 (53%), Positives = 49/78 (62%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSGIC+KR+VVDARHHMLGRL+SITAK + R SG + ++
Sbjct: 1 MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>ref|XP_002882511.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
lyrata] gi|297328351|gb|EFH58770.1| structural
constituent of ribosome [Arabidopsis lyrata subsp.
lyrata]
Length = 207
Score = 72.8 bits (177), Expect = 9e-11
Identities = 43/78 (55%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSGICAKR+VVDARHHMLGRLSSI AK + R SG + ++
Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLSSIVAKELLNGQKVVVVRCEEICLSGGLVRQKMKYM 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>ref|XP_002865669.1| 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata]
gi|297311504|gb|EFH41928.1| 60S ribosomal protein L13A
[Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 72.8 bits (177), Expect = 9e-11
Identities = 42/78 (53%), Positives = 49/78 (62%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSGIC+KR+VVDARHHMLGRL+SITAK + R SG + ++
Sbjct: 1 MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>ref|XP_009374600.1| PREDICTED: 60S ribosomal protein L13a-4 [Pyrus x bretschneideri]
Length = 206
Score = 72.4 bits (176), Expect = 1e-10
Identities = 43/78 (55%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSGICAKR+VVDARHHMLGRLSSI AK + R SG + ++
Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLSSILAKELLNGQKVVVVRAEEICISGGLVRQKMKYM 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>ref|XP_008356990.1| PREDICTED: 60S ribosomal protein L13a-4 [Malus domestica]
gi|694443692|ref|XP_009348407.1| PREDICTED: 60S
ribosomal protein L13a-4-like [Pyrus x bretschneideri]
Length = 206
Score = 72.4 bits (176), Expect = 1e-10
Identities = 43/78 (55%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSGICAKR+VVDARHHMLGRLSSI AK + R SG + ++
Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLSSILAKELLNGQKVVVVRAEEICISGGLVRQKMKYM 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>ref|XP_008348430.1| PREDICTED: 60S ribosomal protein L13a-4 [Malus domestica]
Length = 206
Score = 72.4 bits (176), Expect = 1e-10
Identities = 43/78 (55%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSGICAKR+VVDARHHMLGRLSSI AK + R SG + ++
Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLSSILAKELLNGQKVVVVRAEEICISGGLVRQKMKYM 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78
>pdb|3J61|O Chain O, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome gi|57471706|gb|AAW50984.1| ribosomal protein
L13a [Triticum aestivum] gi|326516494|dbj|BAJ92402.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|473953967|gb|EMS50837.1| 60S ribosomal protein L13a-4
[Triticum urartu] gi|475585532|gb|EMT20078.1| 60S
ribosomal protein L13a-4 [Aegilops tauschii]
Length = 206
Score = 72.4 bits (176), Expect = 1e-10
Identities = 42/78 (53%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Frame = +3
Query: 237 MVSGSGICAKRIVVDARHHMLGRLSSITAK---------L*RDLSFWWSGSSENEVSSFL 389
MVSGSG+CAKR+VVDARHHMLGRL+SI AK + R SG + +L
Sbjct: 1 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 60
Query: 390 -----WMNTKPSHGPIHF 428
MNTKPSHGPIHF
Sbjct: 61 RFLRKRMNTKPSHGPIHF 78