BLASTX nr result

ID: Papaver29_contig00021208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00021208
         (1511 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009342926.1| PREDICTED: F-box/LRR-repeat protein At4g1410...    63   6e-07
ref|XP_008386351.1| PREDICTED: F-box/LRR-repeat protein At4g1410...    61   3e-06

>ref|XP_009342926.1| PREDICTED: F-box/LRR-repeat protein At4g14103-like [Pyrus x
           bretschneideri]
          Length = 462

 Score = 63.2 bits (152), Expect = 6e-07
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
 Frame = -3

Query: 426 PTFNNLVLLEVDYDYVDFPIPSMSSLVKFLHFSPNLESLVIHQ--VHFIQEVKG--YEWX 259
           PTF NL  LEV    +    P   SL+K L  SPNLE+LV       +  + K   +EW 
Sbjct: 323 PTFYNLNHLEV---LLKTCCP-WKSLIKLLEISPNLENLVFENNVECYTADAKNELHEWC 378

Query: 258 XXXXXXXXXXXL-NSIELRNFKGLPEEMEFTRFFLEHAQVL-QLVVLRRGIALNSSSEAI 85
                         SI +R +K  P+EME  ++ LEH  VL +++V  R I +    E  
Sbjct: 379 PPSIVPICLLSSLKSISVRGYKWRPDEMEVAKYMLEHGVVLKKVIVYTRSIPMEKQMELE 438

Query: 84  QQLQNFPRASTDCSFQLL 31
           Q+   FPRAS  C  +L+
Sbjct: 439 QEFSKFPRASKTCQIELV 456


>ref|XP_008386351.1| PREDICTED: F-box/LRR-repeat protein At4g14103 [Malus domestica]
          Length = 462

 Score = 60.8 bits (146), Expect = 3e-06
 Identities = 51/143 (35%), Positives = 63/143 (44%), Gaps = 11/143 (7%)
 Frame = -3

Query: 426 PTFNNLVLLEVDYDYVDFPIPSMSSLVKFLHFSPNLESLVIHQVHFIQEVKGY------- 268
           PTF NL  LEV          S  SL+K L  SPNLE+LV     F   V+ Y       
Sbjct: 323 PTFYNLNHLEVLLK----TCCSWKSLIKLLEISPNLENLV-----FENNVECYTADDNNE 373

Query: 267 --EWXXXXXXXXXXXXL-NSIELRNFKGLPEEMEFTRFFLEHAQVLQLV-VLRRGIALNS 100
             EW               SI +R +K  P+EME  ++ LEH  VL+ V V  R I    
Sbjct: 374 LHEWCPPNIVPICLLSSLKSISVRGYKWRPDEMEVAKYMLEHGVVLKKVTVYTRSIPTEK 433

Query: 99  SSEAIQQLQNFPRASTDCSFQLL 31
             E  Q+   FPRAS  C  +L+
Sbjct: 434 QMELEQEFSKFPRASKTCQTELV 456


Top