BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00018917
         (2179 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s...   691   0.0  
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   656   0.0  
ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   660   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   660   0.0  
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...   663   0.0  
ref|XP_009358374.1| PREDICTED: DNA-directed RNA polymerase III s...   687   0.0  
ref|XP_008358064.1| PREDICTED: DNA-directed RNA polymerase III s...   684   0.0  
ref|XP_008358068.1| PREDICTED: DNA-directed RNA polymerase III s...   684   0.0  
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...   656   0.0  
ref|XP_007208145.1| hypothetical protein PRUPE_ppa024521mg, part...   672   0.0  
ref|XP_008222562.1| PREDICTED: DNA-directed RNA polymerase III s...   671   0.0  
ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s...   639   0.0  
ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III s...   638   0.0  
ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s...   638   0.0  
ref|XP_012835512.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   627   0.0  
gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Erythra...   627   0.0  
ref|XP_012854428.1| PREDICTED: DNA-directed RNA polymerase III s...   626   0.0  
ref|XP_012854429.1| PREDICTED: DNA-directed RNA polymerase III s...   626   0.0  
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   625   0.0  
ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III s...   608   0.0  

>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
            nucifera]
          Length = 1392

 Score =  691 bits (1783), Expect(2) = 0.0
 Identities = 354/478 (74%), Positives = 398/478 (83%), Gaps = 11/478 (2%)
 Frame = -1

Query: 1492 VKKAGTVMGIIHDRSKKFTDDTDKECKAALSGTR--------IQILNPDRVLGLFKRILD 1337
            +   G+ +GI+HDRSK   D++ +EC +A+S  +        + +LNP R+L LFKR++D
Sbjct: 185  ISGTGSTLGIVHDRSK-VNDESLEECSSAISHKKESKASFRVVHVLNPVRILALFKRMVD 243

Query: 1336 QDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGR-SNEDDITSKLNTIIQTNASLRQ 1160
            +DCELLYL DRPEKLIITDI VPPI IRPS F+D G  SNEDDITSKL+ II+ NA LRQ
Sbjct: 244  EDCELLYLYDRPEKLIITDIAVPPIAIRPSVFMDAGTMSNEDDITSKLSAIIRANAPLRQ 303

Query: 1159 DLDGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRG 980
            DL G    S+CL DW+ LQ+EVAQYINS+VRG+P SM Q SKPLRGFVQRLKGKQGRFRG
Sbjct: 304  DLQGANPKSKCLLDWDQLQIEVAQYINSDVRGIPTSM-QPSKPLRGFVQRLKGKQGRFRG 362

Query: 979  NLCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYK 800
            NL GKRVEYT RTVISPDPNLKITEV IPIL+AQILTYPE VS HNIEKLR+CV NG+ K
Sbjct: 363  NLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSHHNIEKLRQCVRNGSQK 422

Query: 799  YPGAKSI-ISAGSVWILN-RRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMC 626
            YPGA  I    GS+  L    RK  A  LK+G IVERHLEDGD+VLFNRQ SLHRMSIM 
Sbjct: 423  YPGANFIRYPDGSIMNLRFSARKRAADELKYGYIVERHLEDGDIVLFNRQPSLHRMSIMS 482

Query: 625  HRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG 446
            HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG
Sbjct: 483  HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG 542

Query: 445  EILVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGK 266
             ILVASTQDFLTS+FLITR+DTFYDRA+F+LMC+YMGD +  VDLP PALIKP+ELWTGK
Sbjct: 543  AILVASTQDFLTSAFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTGK 602

Query: 265  QLFSVLVRPRAQMRVYVNLTVTEKPYKQGKETLCPNEGFVYFQNSELICGQVGKATLG 92
            QLFSVLVRP A MRVY+NLTV EK   + KET+CPN+GFVYF+NSELICGQ+GKATLG
Sbjct: 603  QLFSVLVRPHAHMRVYLNLTVLEKNCVKQKETMCPNDGFVYFRNSELICGQLGKATLG 660



 Score =  224 bits (570), Expect(2) = 0.0
 Identities = 115/188 (61%), Positives = 138/188 (73%), Gaps = 7/188 (3%)
 Frame = -3

Query: 2009 SEAQAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNA 1830
            +  Q +  FTK+PY+EDVGPRKI+SI+FSM SG EI KA+EVQV+ S +YD NRKP  + 
Sbjct: 2    ANTQDRMLFTKEPYIEDVGPRKIKSIRFSMFSGDEIRKAAEVQVWRSVYYDVNRKPIDDG 61

Query: 1829 LLDSRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSC 1650
            LLDSRMGPA SK GI C TC G F +CPGH+GYL+L LPVFNVGYF+ IL+ILKCICKSC
Sbjct: 62   LLDSRMGPA-SKSGI-CTTCDGSFTDCPGHFGYLNLALPVFNVGYFSTILDILKCICKSC 119

Query: 1649 ARILLSEKERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACS 1491
            ARILL E++R  YLKKMR+ KA+ALQK    K I+K C       K   C+RCGYIN   
Sbjct: 120  ARILLEEEKRKDYLKKMRSSKADALQKNNLMKQIVKKCTTMLSSKKALKCTRCGYINGFV 179

Query: 1490 EKSRNSYG 1467
            +K  +  G
Sbjct: 180  KKGASISG 187


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score =  656 bits (1692), Expect(2) = 0.0
 Identities = 347/489 (70%), Positives = 388/489 (79%), Gaps = 21/489 (4%)
 Frame = -1

Query: 1495 VVKKAGTVMGIIHDRSKKFTDDTD--------KECKAALSGTRIQILNPDRVLGLFKRIL 1340
            +VKKA  V+GIIHDRSK      +        KE KAA++     ILNP  VL LFKR+ 
Sbjct: 180  MVKKAVAVLGIIHDRSKVTESLQEFASAITHTKESKAAVN-VATYILNPVNVLFLFKRMT 238

Query: 1339 DQDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQ 1160
            D DCE+LYLS+RPEKLIIT+I VPPI IRPS  +DG +SNE+DIT +L  IIQTNASL+Q
Sbjct: 239  DTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGSQSNENDITERLKRIIQTNASLQQ 298

Query: 1159 DLDGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRG 980
            +L    S  + L  WE LQVEVAQYINS+VRGVP SM Q ++PL GFVQRLKGKQGRFRG
Sbjct: 299  ELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSM-QVARPLSGFVQRLKGKQGRFRG 357

Query: 979  NLCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYK 800
            NL GKRVEYT RTVISPDPNLKITEV IPI +A+ILTYPE VS HNIEKLR+C+ NG  K
Sbjct: 358  NLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDK 417

Query: 799  YPGAKSI-ISAGSVWIL-NRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMC 626
            YPGA+ I    G+  +L  + R   A  LK G IV+RHLEDGDVVLFNRQ SLHRMSIMC
Sbjct: 418  YPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMC 477

Query: 625  HRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG 446
            HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNG
Sbjct: 478  HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNG 537

Query: 445  EILVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGK 266
            EILVASTQDFLTSSFLITR+DTFYDRA+F+LMC YMGD +  VDLP PA++KPVELWTGK
Sbjct: 538  EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGK 597

Query: 265  QLFSVLVRPRAQMRVYVNLTVTEKPYKQGK-----------ETLCPNEGFVYFQNSELIC 119
            QLFSVL+RP A MRVYVNLTV EK Y               ET+CPN+GFVYF+NSELI 
Sbjct: 598  QLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELIS 657

Query: 118  GQVGKATLG 92
            GQ+GKATLG
Sbjct: 658  GQLGKATLG 666



 Score =  219 bits (557), Expect(2) = 0.0
 Identities = 109/185 (58%), Positives = 128/185 (69%), Gaps = 5/185 (2%)
 Frame = -3

Query: 2021 TARQSEAQAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKP 1842
            T +  +      FTKQPY+EDVGPRKI+SI+FSMMS  EIMKA+EVQVY   +Y  NR P
Sbjct: 2    TQQLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVP 61

Query: 1841 KKNALLDSRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCI 1662
             +  LLD RMGPA       C TCHG F+NCPGHYGYL L LPV+NVGY + IL+ILKCI
Sbjct: 62   IEGGLLDPRMGPANKSC--TCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCI 119

Query: 1661 CKSCARILLSEKERVSYLKKMRNPKAEALQKTATAKAILKSC-----KPETCSRCGYINA 1497
            CK C+R+LL EK    YLKKMRNPK EAL+KT   K+I+K C     K   C RCGYIN 
Sbjct: 120  CKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMASKAVKCPRCGYING 179

Query: 1496 CSEKS 1482
              +K+
Sbjct: 180  MVKKA 184


>ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit rpc1 [Cucumis melo]
          Length = 1400

 Score =  660 bits (1703), Expect(2) = 0.0
 Identities = 335/477 (70%), Positives = 390/477 (81%), Gaps = 10/477 (2%)
 Frame = -1

Query: 1492 VKKAGTVMGIIHDRSKKFTDDTDKECKAALSGTRIQILNPDRVLGLFKRILDQDCELLYL 1313
            VKKA +++GI+H R++        E   A       ILNP RVL LF+R+ D+DCELL+L
Sbjct: 180  VKKAVSMLGILHYRARSKDAGVVSEDLRAPYNVSNDILNPFRVLCLFQRMSDEDCELLFL 239

Query: 1312 SDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDLDGKKSTS 1133
            SDRPEKLIIT++LVPPI IRPS  +DG +SNE+DIT +L  IIQ NAS+ Q+L    S +
Sbjct: 240  SDRPEKLIITNVLVPPIAIRPSVIMDGSQSNENDITERLKRIIQQNASVSQELSTSNSQA 299

Query: 1132 QCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEY 953
            +CL  W++LQ EVAQ INS+VRG+P +M Q SKPL GFVQRLKGKQGRFRGNLCGKRVE+
Sbjct: 300  KCLESWDMLQSEVAQLINSDVRGIPFTM-QVSKPLAGFVQRLKGKQGRFRGNLCGKRVEF 358

Query: 952  TARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSII- 776
            T RTVISPDPNLKITEV +PI +A+ILTYPE V+ HNIEKLR+CV NG  KYPGA+ +  
Sbjct: 359  TGRTVISPDPNLKITEVAVPIHMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRH 418

Query: 775  ---SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMP 605
               S  S+ I  R+R +D   LK+G+IVERHLEDGDVVLFNRQ SLHRMSIMCHR ++MP
Sbjct: 419  LDGSMRSLMISGRKRLADE--LKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMP 476

Query: 604  WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST 425
            WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGEILVAST
Sbjct: 477  WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVAST 536

Query: 424  QDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGKQLFSVLV 245
            QDFLTSSFLITR+DTFYDRA+F+LMC+YMGD +  +DLP PALIKP+ELWTGKQLFSVLV
Sbjct: 537  QDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLIDLPTPALIKPIELWTGKQLFSVLV 596

Query: 244  RPRAQMRVYVNLTVTEKPYKQGK------ETLCPNEGFVYFQNSELICGQVGKATLG 92
            RP A M+VY+NLTV EK Y + K      ET+CPN+GFVYF+NSELI GQVGKATLG
Sbjct: 597  RPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLG 653



 Score =  211 bits (536), Expect(2) = 0.0
 Identities = 104/180 (57%), Positives = 124/180 (68%), Gaps = 7/180 (3%)
 Frame = -3

Query: 1985 FTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMGP 1806
            FTKQPY+EDVGPRKI+S++F+  SG EI K +EVQVY   +YD  RKP    LLD RMGP
Sbjct: 11   FTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMGP 70

Query: 1805 AGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSEK 1626
            A    G  C TCH +F +CPGHYGY++L LPVFNVGYF  IL ILKCICKSC+RILL EK
Sbjct: 71   ANK--GCKCSTCHANFGDCPGHYGYVNLSLPVFNVGYFTTILEILKCICKSCSRILLEEK 128

Query: 1625 ERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKSRNSYG 1467
                +L+KMRNPK EAL+K    K I+K C       K   CSRCGY+N   +K+ +  G
Sbjct: 129  LYKDFLRKMRNPKLEALRKCDLVKKIIKKCSTLTTGNKSTKCSRCGYLNGSVKKAVSMLG 188


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Cucumis
            sativus]
          Length = 1400

 Score =  660 bits (1702), Expect(2) = 0.0
 Identities = 335/477 (70%), Positives = 391/477 (81%), Gaps = 10/477 (2%)
 Frame = -1

Query: 1492 VKKAGTVMGIIHDRSKKFTDDTDKECKAALSGTRIQILNPDRVLGLFKRILDQDCELLYL 1313
            VKKA +++GI+H R++        E   A       ILNP RVL LF+R+ D+DCELL+L
Sbjct: 180  VKKAVSMLGILHYRARSKDAGVVSEDLRAPYNVSNDILNPFRVLCLFQRMSDEDCELLFL 239

Query: 1312 SDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDLDGKKSTS 1133
            S+RPEKLIIT++LVPPI IRPS  +DG +SNE+DIT +L  IIQ NAS+ Q+L    S +
Sbjct: 240  SNRPEKLIITNVLVPPIAIRPSVIMDGSQSNENDITERLKRIIQQNASVSQELSTSNSQA 299

Query: 1132 QCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEY 953
            +CL  W++LQ EVAQ INS+VRG+P SM Q SKPL GFVQRLKGKQGRFRGNLCGKRVE+
Sbjct: 300  KCLESWDMLQSEVAQLINSDVRGIPFSM-QVSKPLAGFVQRLKGKQGRFRGNLCGKRVEF 358

Query: 952  TARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSII- 776
            T RTVISPDPNLKITEV +PI +A+ILTYPE V++HNIEKLR+CV NG  KYPGA+ +  
Sbjct: 359  TGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARMLRH 418

Query: 775  ---SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMP 605
               S  S+ I  R+R +D   LK+G+IVERHLEDGDVVLFNRQ SLHRMSIMCHR ++MP
Sbjct: 419  LDGSMRSLMISGRKRLADE--LKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMP 476

Query: 604  WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST 425
            WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGEILVAST
Sbjct: 477  WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVAST 536

Query: 424  QDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGKQLFSVLV 245
            QDFLTSSFLITR+DTFYDRA+F+LMC+YMGD +  VDLP PAL+KP+ELWTGKQLFSVLV
Sbjct: 537  QDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLV 596

Query: 244  RPRAQMRVYVNLTVTEKPYKQGK------ETLCPNEGFVYFQNSELICGQVGKATLG 92
            RP A M+VY+NLTV EK Y + K      ET+CPN+GFVYF+NSELI GQVGKATLG
Sbjct: 597  RPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLG 653



 Score =  211 bits (536), Expect(2) = 0.0
 Identities = 104/180 (57%), Positives = 124/180 (68%), Gaps = 7/180 (3%)
 Frame = -3

Query: 1985 FTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMGP 1806
            FTKQPY+EDVGPRKI+S++F+  SG EI K +EVQVY   +YD  RKP    LLD RMGP
Sbjct: 11   FTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMGP 70

Query: 1805 AGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSEK 1626
            A    G  C TCH +F +CPGHYGY++L LPVFNVGYF  IL ILKCICKSC+RILL EK
Sbjct: 71   ANK--GCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRILLEEK 128

Query: 1625 ERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKSRNSYG 1467
                +L+KMRNPK EAL+K    K I+K C       K   CSRCGY+N   +K+ +  G
Sbjct: 129  LFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNKSTRCSRCGYLNGSVKKAVSMLG 188


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
            gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
            [Theobroma cacao]
          Length = 1395

 Score =  663 bits (1711), Expect(2) = 0.0
 Identities = 343/489 (70%), Positives = 395/489 (80%), Gaps = 22/489 (4%)
 Frame = -1

Query: 1492 VKKAGTVMGIIHDRSKKFTDDTDKECKAALSGTR---------IQILNPDRVLGLFKRIL 1340
            VKKA  ++GIIHDRSK   D++ +E ++A+S T+           +LNP +VL LFKR+ 
Sbjct: 173  VKKAVAMLGIIHDRSK-INDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMT 231

Query: 1339 DQDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQ 1160
            D DCELLYLSDRPEKLIIT+I VPPIPIRPS  +DG +SNE+DIT +L  IIQ NASLRQ
Sbjct: 232  DLDCELLYLSDRPEKLIITNIAVPPIPIRPSVIMDGSQSNENDITERLKRIIQANASLRQ 291

Query: 1159 DLDGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRG 980
            +L    +  +CLG WE+LQVEVAQYINS+VRGVP SM Q SKPL GFVQR+KGK GRFRG
Sbjct: 292  ELVETNAAFKCLGGWEMLQVEVAQYINSDVRGVPFSM-QVSKPLSGFVQRIKGKHGRFRG 350

Query: 979  NLCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYK 800
            NL GKRVEYT RTVISPDPNLKITEV IPI +A+ILTYPE VS HNIEKLR+CV NG  K
Sbjct: 351  NLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSK 410

Query: 799  YPGAKSI-ISAGSVWIL-NRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMC 626
            YPGA+ +    GS  +L    RK  A  LKFG +V+RHLEDGD+VLFNRQ SLHRMSIMC
Sbjct: 411  YPGARMVRYPDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMC 470

Query: 625  HRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG 446
            HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG
Sbjct: 471  HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG 530

Query: 445  EILVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGK 266
            EILVASTQDFLTSSFLITR+D FYDRA+F+L+C+YMGD +  +DLP PAL+KP+ELWTGK
Sbjct: 531  EILVASTQDFLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGK 590

Query: 265  QLFSVLVRPRAQMRVYVNLTVTEKPYKQ-----------GKETLCPNEGFVYFQNSELIC 119
            QLFSVL+RP A +RVY+NL V E+ Y +             ET+CP++GFVY +NSELIC
Sbjct: 591  QLFSVLLRPHASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELIC 650

Query: 118  GQVGKATLG 92
            GQ+GKATLG
Sbjct: 651  GQLGKATLG 659



 Score =  206 bits (525), Expect(2) = 0.0
 Identities = 103/177 (58%), Positives = 131/177 (74%), Gaps = 6/177 (3%)
 Frame = -3

Query: 1994 QFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSR 1815
            Q +FTK+PY+EDVGPRKI+SI+FSM+S  EI KA+EVQVY + +YD   +P +  LLD R
Sbjct: 2    QQKFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPR 61

Query: 1814 MGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILL 1635
            MGPA +K G  C TCHG+FA+CPGHYGYL L LPV+NVGY + IL+ILKCICKSC+RI+L
Sbjct: 62   MGPA-NKSGK-CATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIIL 119

Query: 1634 SEKERVSYLKKMRNPKAEALQKTATAKAILKSC------KPETCSRCGYINACSEKS 1482
             EK    YLK+MR+PK +AL+K    K+I+K C      K   C RCGY+N   +K+
Sbjct: 120  DEKLCKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASSKAVKCWRCGYVNGTVKKA 176


>ref|XP_009358374.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Pyrus x
            bretschneideri]
          Length = 864

 Score =  687 bits (1772), Expect(2) = 0.0
 Identities = 352/482 (73%), Positives = 402/482 (83%), Gaps = 15/482 (3%)
 Frame = -1

Query: 1492 VKKAGTVMGIIHDRSKKFTDDTDKECKAALSGTR---------IQILNPDRVLGLFKRIL 1340
            VKKA  V+GIIHDRSK F    D + ++A+S T+            LNP RV  LFKR++
Sbjct: 181  VKKAVGVLGIIHDRSK-FVGVMD-DFRSAISHTKESKASFNPATHNLNPARVFSLFKRMV 238

Query: 1339 DQDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQ 1160
            D+DCELLYLSDRPE LI+T+I VPPIPIRPS  VDG +SNE+DIT +L  IIQ+N+SLRQ
Sbjct: 239  DEDCELLYLSDRPENLIMTNIAVPPIPIRPSVIVDGSQSNENDITERLKRIIQSNSSLRQ 298

Query: 1159 DLDGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRG 980
            DL    S ++CL  WE+LQVEVAQYINS+VRGVP SM Q+SKPL GFVQRLKGK GRFRG
Sbjct: 299  DLMEASSAAKCLASWEILQVEVAQYINSDVRGVPFSM-QTSKPLAGFVQRLKGKGGRFRG 357

Query: 979  NLCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYK 800
            NL GKRVEYT RTVISPDPNLKITEVGIPI +A ILTYPE VS HNIEKLR+CV NG  K
Sbjct: 358  NLSGKRVEYTGRTVISPDPNLKITEVGIPIKMATILTYPERVSHHNIEKLRQCVSNGPDK 417

Query: 799  YPGAKSIISA-GSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCH 623
            YPGA+ + ++ G+ W+L   RKS A  LK+GDIVERHLEDGDVVLFNRQ SLHRMS+MCH
Sbjct: 418  YPGARVLRNSDGTEWVLKVNRKSIADSLKYGDIVERHLEDGDVVLFNRQPSLHRMSLMCH 477

Query: 622  RAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGE 443
            RAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL LMGVQNNLCTPKNGE
Sbjct: 478  RAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGE 537

Query: 442  ILVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGKQ 263
            +LVASTQDFLTSSFLITR+DTFYDRASF+LMC+YMGD + ++DLP P++IKP+ELWTGKQ
Sbjct: 538  VLVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGVDTIDLPTPSVIKPIELWTGKQ 597

Query: 262  LFSVLVRPRAQMRVYVNLTVTEKPYKQ---GKE--TLCPNEGFVYFQNSELICGQVGKAT 98
            LFSVLVRP + +RVY+NLTVTEK Y +   G+E   +CPN+GFVYF+NSELI GQ+GK T
Sbjct: 598  LFSVLVRPNSNVRVYLNLTVTEKSYTKTGDGREIDAMCPNDGFVYFRNSELIAGQLGKGT 657

Query: 97   LG 92
            LG
Sbjct: 658  LG 659



 Score =  182 bits (463), Expect(2) = 0.0
 Identities = 89/175 (50%), Positives = 116/175 (66%), Gaps = 7/175 (4%)
 Frame = -3

Query: 1985 FTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMGP 1806
            FTKQP++ED G  +I+  KFS MS  EI K +EVQ++   +YD NRKP +  LLD R+GP
Sbjct: 11   FTKQPFIEDEGHLRIEKWKFSAMSDKEIGKMAEVQIFKGQYYDSNRKPIEGGLLDPRLGP 70

Query: 1805 AGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSEK 1626
            A    G  C TC G   +CPGH+GYL L LPVFNVGY + I++ILKCICK C+ ILL E 
Sbjct: 71   ANRSSGA-CATCGGTTKDCPGHFGYLVLALPVFNVGYLSTIVDILKCICKLCSGILLEEG 129

Query: 1625 ERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKS 1482
             R+ +LKKMR PK E ++K+   K I+K C       +P  CS+CG+IN   +K+
Sbjct: 130  MRIEFLKKMRRPKMEPMKKSELMKVIVKKCNSLTTNNRPVKCSKCGFINGSVKKA 184


>ref|XP_008358064.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Malus domestica]
          Length = 1419

 Score =  684 bits (1764), Expect(2) = 0.0
 Identities = 352/481 (73%), Positives = 396/481 (82%), Gaps = 14/481 (2%)
 Frame = -1

Query: 1492 VKKAGTVMGIIHDRSKKFTDDTD--------KECKAALSGTRIQILNPDRVLGLFKRILD 1337
            VKKA  V+GIIHDRSK      D        KE KA+ +      LNP RV  LFKR++D
Sbjct: 181  VKKAVGVLGIIHDRSKFIGVMDDFRSAISHTKESKASFNPATHN-LNPARVFSLFKRMVD 239

Query: 1336 QDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQD 1157
            +DCELLYLSDRPE LI+T+I VPPIPIRPS  VDG +SNE+DIT +L  IIQ+N+SLRQD
Sbjct: 240  EDCELLYLSDRPENLIMTNIAVPPIPIRPSVIVDGSQSNENDITERLKRIIQSNSSLRQD 299

Query: 1156 LDGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGN 977
            L    S ++CL  WE+LQVEVAQYINS+VRGVP SM Q+SKPL GFVQRLKGK GRFRGN
Sbjct: 300  LIEASSAAKCLASWEILQVEVAQYINSDVRGVPFSM-QTSKPLAGFVQRLKGKGGRFRGN 358

Query: 976  LCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKY 797
            L GKRVEYT RTVISPDPNLKITEVGIPI +A ILTYPE VS HNIEKLR+CV NG  KY
Sbjct: 359  LSGKRVEYTGRTVISPDPNLKITEVGIPIKMATILTYPERVSHHNIEKLRQCVSNGPDKY 418

Query: 796  PGAKSIISA-GSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHR 620
            PGA+ + ++ G+ W+L   RKS A  LK+GDIVERHLEDGDVVLFNRQ SLHRMS+MCHR
Sbjct: 419  PGARVLRNSDGTEWVLKVNRKSIADSLKYGDIVERHLEDGDVVLFNRQPSLHRMSLMCHR 478

Query: 619  AKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEI 440
            AKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL LMGVQNNLCTPKNGE+
Sbjct: 479  AKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEV 538

Query: 439  LVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGKQL 260
            LVASTQDFLTSSFLITR+DTFYDRASF+LMC+YMGD   ++DLP P++IKP+ELWTGKQL
Sbjct: 539  LVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGADTIDLPTPSVIKPIELWTGKQL 598

Query: 259  FSVLVRPRAQMRVYVNLTVTEKPY-KQGK----ETLCPNEGFVYFQNSELICGQVGKATL 95
            FSVLVRP + +RVY+N TVTEK Y K G     E +CPN+GFVYF+NSELI GQ+GK TL
Sbjct: 599  FSVLVRPNSNVRVYLNXTVTEKSYTKTGDGREIEAMCPNDGFVYFRNSELIAGQLGKGTL 658

Query: 94   G 92
            G
Sbjct: 659  G 659



 Score =  183 bits (465), Expect(2) = 0.0
 Identities = 89/175 (50%), Positives = 116/175 (66%), Gaps = 7/175 (4%)
 Frame = -3

Query: 1985 FTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMGP 1806
            FTKQP++ED G  +I+  KFS MS  EI K +EVQ++   +YD NRKP +  LLD R+GP
Sbjct: 11   FTKQPFIEDEGHLRIEKWKFSAMSDKEIRKMAEVQIFKGQYYDSNRKPIEGGLLDPRLGP 70

Query: 1805 AGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSEK 1626
            A    G  C TC G   +CPGH+GYL L LPVFNVGY + I++ILKCICK C+ ILL E 
Sbjct: 71   ANRSSGA-CATCGGTTKDCPGHFGYLVLALPVFNVGYLSTIVDILKCICKLCSGILLEEG 129

Query: 1625 ERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKS 1482
             R+ +LKKMR PK E ++K+   K I+K C       +P  CS+CG+IN   +K+
Sbjct: 130  MRIEFLKKMRRPKMEPMKKSELMKVIVKKCNSLTTNNRPVKCSKCGFINGSVKKA 184


>ref|XP_008358068.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Malus domestica]
          Length = 1390

 Score =  684 bits (1764), Expect(2) = 0.0
 Identities = 352/481 (73%), Positives = 396/481 (82%), Gaps = 14/481 (2%)
 Frame = -1

Query: 1492 VKKAGTVMGIIHDRSKKFTDDTD--------KECKAALSGTRIQILNPDRVLGLFKRILD 1337
            VKKA  V+GIIHDRSK      D        KE KA+ +      LNP RV  LFKR++D
Sbjct: 181  VKKAVGVLGIIHDRSKFIGVMDDFRSAISHTKESKASFNPATHN-LNPARVFSLFKRMVD 239

Query: 1336 QDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQD 1157
            +DCELLYLSDRPE LI+T+I VPPIPIRPS  VDG +SNE+DIT +L  IIQ+N+SLRQD
Sbjct: 240  EDCELLYLSDRPENLIMTNIAVPPIPIRPSVIVDGSQSNENDITERLKRIIQSNSSLRQD 299

Query: 1156 LDGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGN 977
            L    S ++CL  WE+LQVEVAQYINS+VRGVP SM Q+SKPL GFVQRLKGK GRFRGN
Sbjct: 300  LIEASSAAKCLASWEILQVEVAQYINSDVRGVPFSM-QTSKPLAGFVQRLKGKGGRFRGN 358

Query: 976  LCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKY 797
            L GKRVEYT RTVISPDPNLKITEVGIPI +A ILTYPE VS HNIEKLR+CV NG  KY
Sbjct: 359  LSGKRVEYTGRTVISPDPNLKITEVGIPIKMATILTYPERVSHHNIEKLRQCVSNGPDKY 418

Query: 796  PGAKSIISA-GSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHR 620
            PGA+ + ++ G+ W+L   RKS A  LK+GDIVERHLEDGDVVLFNRQ SLHRMS+MCHR
Sbjct: 419  PGARVLRNSDGTEWVLKVNRKSIADSLKYGDIVERHLEDGDVVLFNRQPSLHRMSLMCHR 478

Query: 619  AKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEI 440
            AKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL LMGVQNNLCTPKNGE+
Sbjct: 479  AKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEV 538

Query: 439  LVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGKQL 260
            LVASTQDFLTSSFLITR+DTFYDRASF+LMC+YMGD   ++DLP P++IKP+ELWTGKQL
Sbjct: 539  LVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGADTIDLPTPSVIKPIELWTGKQL 598

Query: 259  FSVLVRPRAQMRVYVNLTVTEKPY-KQGK----ETLCPNEGFVYFQNSELICGQVGKATL 95
            FSVLVRP + +RVY+N TVTEK Y K G     E +CPN+GFVYF+NSELI GQ+GK TL
Sbjct: 599  FSVLVRPNSNVRVYLNXTVTEKSYTKTGDGREIEAMCPNDGFVYFRNSELIAGQLGKGTL 658

Query: 94   G 92
            G
Sbjct: 659  G 659



 Score =  183 bits (465), Expect(2) = 0.0
 Identities = 89/175 (50%), Positives = 116/175 (66%), Gaps = 7/175 (4%)
 Frame = -3

Query: 1985 FTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMGP 1806
            FTKQP++ED G  +I+  KFS MS  EI K +EVQ++   +YD NRKP +  LLD R+GP
Sbjct: 11   FTKQPFIEDEGHLRIEKWKFSAMSDKEIRKMAEVQIFKGQYYDSNRKPIEGGLLDPRLGP 70

Query: 1805 AGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSEK 1626
            A    G  C TC G   +CPGH+GYL L LPVFNVGY + I++ILKCICK C+ ILL E 
Sbjct: 71   ANRSSGA-CATCGGTTKDCPGHFGYLVLALPVFNVGYLSTIVDILKCICKLCSGILLEEG 129

Query: 1625 ERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKS 1482
             R+ +LKKMR PK E ++K+   K I+K C       +P  CS+CG+IN   +K+
Sbjct: 130  MRIEFLKKMRRPKMEPMKKSELMKVIVKKCNSLTTNNRPVKCSKCGFINGSVKKA 184


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score =  656 bits (1692), Expect(2) = 0.0
 Identities = 347/489 (70%), Positives = 388/489 (79%), Gaps = 21/489 (4%)
 Frame = -1

Query: 1495 VVKKAGTVMGIIHDRSKKFTDDTD--------KECKAALSGTRIQILNPDRVLGLFKRIL 1340
            +VKKA  V+GIIHDRSK      +        KE KAA++     ILNP  VL LFKR+ 
Sbjct: 195  MVKKAVAVLGIIHDRSKVTESLQEFASAITHTKESKAAVN-VATYILNPVNVLFLFKRMT 253

Query: 1339 DQDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQ 1160
            D DCE+LYLS+RPEKLIIT+I VPPI IRPS  +DG +SNE+DIT +L  IIQTNASL+Q
Sbjct: 254  DTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGSQSNENDITERLKRIIQTNASLQQ 313

Query: 1159 DLDGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRG 980
            +L    S  + L  WE LQVEVAQYINS+VRGVP SM Q ++PL GFVQRLKGKQGRFRG
Sbjct: 314  ELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSM-QVARPLSGFVQRLKGKQGRFRG 372

Query: 979  NLCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYK 800
            NL GKRVEYT RTVISPDPNLKITEV IPI +A+ILTYPE VS HNIEKLR+C+ NG  K
Sbjct: 373  NLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDK 432

Query: 799  YPGAKSI-ISAGSVWIL-NRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMC 626
            YPGA+ I    G+  +L  + R   A  LK G IV+RHLEDGDVVLFNRQ SLHRMSIMC
Sbjct: 433  YPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMC 492

Query: 625  HRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG 446
            HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNG
Sbjct: 493  HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNG 552

Query: 445  EILVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGK 266
            EILVASTQDFLTSSFLITR+DTFYDRA+F+LMC YMGD +  VDLP PA++KPVELWTGK
Sbjct: 553  EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGK 612

Query: 265  QLFSVLVRPRAQMRVYVNLTVTEKPYKQGK-----------ETLCPNEGFVYFQNSELIC 119
            QLFSVL+RP A MRVYVNLTV EK Y               ET+CPN+GFVYF+NSELI 
Sbjct: 613  QLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELIS 672

Query: 118  GQVGKATLG 92
            GQ+GKATLG
Sbjct: 673  GQLGKATLG 681



 Score =  209 bits (531), Expect(2) = 0.0
 Identities = 109/200 (54%), Positives = 128/200 (64%), Gaps = 20/200 (10%)
 Frame = -3

Query: 2021 TARQSEAQAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKP 1842
            T +  +      FTKQPY+EDVGPRKI+SI+FSMMS  EIMKA+EVQVY   +Y  NR P
Sbjct: 2    TQQLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVP 61

Query: 1841 KKNALLDSRM---------------GPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVF 1707
             +  LLD RM               GPA       C TCHG F+NCPGHYGYL L LPV+
Sbjct: 62   IEGGLLDPRMEKIIFLQRLFFHGFQGPANKSC--TCATCHGGFSNCPGHYGYLTLALPVY 119

Query: 1706 NVGYFNAILNILKCICKSCARILLSEKERVSYLKKMRNPKAEALQKTATAKAILKSC--- 1536
            NVGY + IL+ILKCICK C+R+LL EK    YLKKMRNPK EAL+KT   K+I+K C   
Sbjct: 120  NVGYLSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTM 179

Query: 1535 --KPETCSRCGYINACSEKS 1482
              K   C RCGYIN   +K+
Sbjct: 180  ASKAVKCPRCGYINGMVKKA 199


>ref|XP_007208145.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
            gi|462403787|gb|EMJ09344.1| hypothetical protein
            PRUPE_ppa024521mg, partial [Prunus persica]
          Length = 867

 Score =  672 bits (1733), Expect(2) = 0.0
 Identities = 342/480 (71%), Positives = 391/480 (81%), Gaps = 13/480 (2%)
 Frame = -1

Query: 1492 VKKAGTVMGIIHDRSK--------KFTDDTDKECKAALSGTRIQILNPDRVLGLFKRILD 1337
            VKKA  V+GIIHDRSK        + T    KE KA+ +     +LNP R+  LFKR++D
Sbjct: 184  VKKAVGVLGIIHDRSKLNGVMDDFRTTLSHTKESKASFN-VATHMLNPARIYSLFKRMVD 242

Query: 1336 QDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQD 1157
            +DCELL LS+RP+ LII +I VPPI IRPS  VD   SNE+DIT +L  IIQ+NA LR+D
Sbjct: 243  EDCELLNLSNRPQNLIIKNIAVPPIAIRPSVIVDRSLSNENDITERLKRIIQSNAILRRD 302

Query: 1156 LDGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGN 977
            L   KS  +CL  W++LQVEVAQYINS++RGVP SM Q++KPL GFVQRLKGK GRFRGN
Sbjct: 303  LLEAKSAPKCLASWDILQVEVAQYINSDIRGVPFSM-QTAKPLSGFVQRLKGKGGRFRGN 361

Query: 976  LCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKY 797
            L GKRVEYT RTVISPDPNLKITEVG+PI +AQILTYPE VS HNIEKLR+CV NG  KY
Sbjct: 362  LSGKRVEYTGRTVISPDPNLKITEVGVPIKMAQILTYPERVSHHNIEKLRQCVSNGPDKY 421

Query: 796  PGAKSIISA-GSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHR 620
            PGA+ + +  G+ W L   RK+ A GLK+GDIVERHLEDGD+VLFNRQ SLHRMSIMCHR
Sbjct: 422  PGARMLRNPDGTEWSLKVNRKNAADGLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHR 481

Query: 619  AKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEI 440
            AK+MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+MLMGVQNNLCTPKNGE+
Sbjct: 482  AKVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVMLMGVQNNLCTPKNGEV 541

Query: 439  LVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGKQL 260
            LVASTQDFLTSSFLITR+DTFYDRASF+LMC+YMGD    VDLP PA+IKP+ELWTGKQL
Sbjct: 542  LVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGTDPVDLPTPAVIKPIELWTGKQL 601

Query: 259  FSVLVRPRAQMRVYVNLTVTEKPYKQ----GKETLCPNEGFVYFQNSELICGQVGKATLG 92
            FSVLVRP + +RVY+N TV EK Y +    G E +CPN+GFVYF+NSELI GQ+GK TLG
Sbjct: 602  FSVLVRPNSNVRVYLNFTVNEKSYSKTEDGGPEAMCPNDGFVYFRNSELIAGQLGKGTLG 661



 Score =  176 bits (446), Expect(2) = 0.0
 Identities = 86/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
 Frame = -3

Query: 1985 FTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMGP 1806
            FTKQP++ED G RKI+  +FS MS  EI+  +E Q+Y   +YD N+KP +  LLD R+GP
Sbjct: 14   FTKQPFIEDEGHRKIEKWQFSAMSDTEIVNMAETQIYKCNYYDPNQKPIEGGLLDPRLGP 73

Query: 1805 AGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSEK 1626
            A    G  C TC     +CPGH+G+L L LPV NVGY + +++ILKCICK C+ ILL E 
Sbjct: 74   ANKSSGE-CATCGAVMKDCPGHFGFLVLALPVLNVGYLSTVVDILKCICKLCSGILLEEG 132

Query: 1625 ERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKS 1482
             R  +LKKMR+PK E L+KT   K I+K C       +P  CS+CG+IN   +K+
Sbjct: 133  MRNDFLKKMRSPKMEPLRKTELMKKIVKKCNNLTTNYRPVKCSKCGFINGSVKKA 187


>ref|XP_008222562.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Prunus mume]
          Length = 1425

 Score =  671 bits (1731), Expect(2) = 0.0
 Identities = 342/480 (71%), Positives = 391/480 (81%), Gaps = 13/480 (2%)
 Frame = -1

Query: 1492 VKKAGTVMGIIHDRSK--------KFTDDTDKECKAALSGTRIQILNPDRVLGLFKRILD 1337
            VKKA  V+GIIHDRSK        + T    KE KA+ +     +LNP R+  LFKR++D
Sbjct: 184  VKKAVGVLGIIHDRSKLNGVMDDFRTTLSHTKESKASFN-VATHMLNPARIYSLFKRMVD 242

Query: 1336 QDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQD 1157
            +DCELL LS+RPE LI+ +I VPPI IRPS  VD   SNE+DIT +L  IIQ+NA LR+D
Sbjct: 243  EDCELLNLSNRPENLIMKNIAVPPIAIRPSVIVDRSLSNENDITERLKRIIQSNAILRRD 302

Query: 1156 LDGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGN 977
            L   KS  +CL  W++LQVEVAQYINS++RGVP SM Q++KPL GFVQRLKGK GRFRGN
Sbjct: 303  LLEAKSAPKCLASWDILQVEVAQYINSDIRGVPFSM-QTAKPLSGFVQRLKGKGGRFRGN 361

Query: 976  LCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKY 797
            L GKRVEYT RTVISPDPNLKITEVGIPI +AQILTYPE VS HNIEKLR+CV NG  KY
Sbjct: 362  LSGKRVEYTGRTVISPDPNLKITEVGIPIKMAQILTYPERVSHHNIEKLRQCVSNGPDKY 421

Query: 796  PGAKSIISA-GSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHR 620
            PGA+ + +  G+ W L   RK+ A GLK+GDIVERHLEDGD+VLFNRQ SLHRMSIMCHR
Sbjct: 422  PGARMLRNPDGTEWSLKVNRKNAADGLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHR 481

Query: 619  AKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEI 440
            AK+MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGE+
Sbjct: 482  AKVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVLLMGVQNNLCTPKNGEV 541

Query: 439  LVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGKQL 260
            LVASTQDFLTSSFLITR+DTFYDRASF+LMC+YMGD    VDLP PA+IKP+ELWTGKQL
Sbjct: 542  LVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGTDPVDLPTPAVIKPIELWTGKQL 601

Query: 259  FSVLVRPRAQMRVYVNLTVTEKPYKQ----GKETLCPNEGFVYFQNSELICGQVGKATLG 92
            FSVLVRP + +RVY+N TV EK Y +    G E +CPN+GFVYF+NSELI GQ+GK TLG
Sbjct: 602  FSVLVRPNSNVRVYLNFTVNEKSYSKTEDGGPEAMCPNDGFVYFRNSELIAGQLGKGTLG 661



 Score =  176 bits (447), Expect(2) = 0.0
 Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
 Frame = -3

Query: 1985 FTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMGP 1806
            FTKQP++ED G RKI+  +FS MS  EI+  +E Q+Y   +YD N+KP +  LLD R+GP
Sbjct: 14   FTKQPFIEDEGHRKIEKWQFSTMSDTEIVNMAETQIYKCNYYDPNQKPIEGGLLDPRLGP 73

Query: 1805 AGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSEK 1626
            A    G  C TC     +CPGH+G+L L LPV NVGY + I++ILKCICK C+ ILL E 
Sbjct: 74   ANKSSGE-CATCGAVMKDCPGHFGFLVLALPVLNVGYLSTIVDILKCICKLCSGILLEEG 132

Query: 1625 ERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKS 1482
             R  +LKKMR+PK E L+KT   K I+K C       +P  CS+CG+IN   +K+
Sbjct: 133  MRNDFLKKMRSPKMEPLRKTELMKKIVKKCNNLTTNYRPVKCSKCGFINGSVKKA 187


>ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED:
            DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris]
          Length = 1390

 Score =  639 bits (1649), Expect(2) = 0.0
 Identities = 332/469 (70%), Positives = 379/469 (80%), Gaps = 11/469 (2%)
 Frame = -1

Query: 1465 IIHDRSKKFTDDTDKECKAALSG-----TRIQI---LNPDRVLGLFKRILDQDCELLYLS 1310
            IIH+R  +F D    E  AA+S      T + +   ++P  V  LFK + D+DCELLYLS
Sbjct: 186  IIHERGNRFLD----EFNAAISHKIDLKTSVSVPPEIDPKAVYSLFKNMSDEDCELLYLS 241

Query: 1309 DRPEKLIITDILVPPIPIRPSSFVDGG-RSNEDDITSKLNTIIQTNASLRQDLDGKKSTS 1133
            DRPEKL++T I VPPI IRPS FVDGG +SNE+DIT +L  IIQ NA L +D+      +
Sbjct: 242  DRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQENARLLEDISDTSFQN 301

Query: 1132 QCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEY 953
            + L  W  LQ+EVAQYINS+VRGVPL + Q+SKP+ GF QRLKGKQGRFRGNL GKRVEY
Sbjct: 302  KSLNAWVGLQMEVAQYINSDVRGVPLHL-QASKPMSGFTQRLKGKQGRFRGNLSGKRVEY 360

Query: 952  TARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSII- 776
            T RTVISPDPNLKITEV IPIL+A+ILTYPE VSQHNIEKLR+CV NG  KYPGAK I  
Sbjct: 361  TGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIKH 420

Query: 775  -SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMPWR 599
                 + ++   RK  A  LKFG IV+RHLEDGD+VLFNRQ SLHRMSIM HRA+IMPWR
Sbjct: 421  PDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 480

Query: 598  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 419
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQD
Sbjct: 481  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQD 540

Query: 418  FLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGKQLFSVLVRP 239
            FLTSSFLITR+DTFYDRASF+L+C+YMGD +  +DLP PALIKPVELWTGKQLF VL+RP
Sbjct: 541  FLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALIKPVELWTGKQLFGVLLRP 600

Query: 238  RAQMRVYVNLTVTEKPYKQGKETLCPNEGFVYFQNSELICGQVGKATLG 92
             ++MRVYVNLTVTEK Y    ET+CP++GFVYF+NSELI GQ+GKATLG
Sbjct: 601  YSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLG 649



 Score =  206 bits (524), Expect(2) = 0.0
 Identities = 98/181 (54%), Positives = 124/181 (68%), Gaps = 7/181 (3%)
 Frame = -3

Query: 2000 QAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLD 1821
            Q   QFTK+PY+EDVGPRKI+SI+FS+ S  EI+K  EV+VY   +YD  +KP  N LLD
Sbjct: 5    QEIIQFTKEPYIEDVGPRKIKSIQFSLFSEVEILKLGEVEVYRGVYYDSTKKPIPNGLLD 64

Query: 1820 SRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARI 1641
             RMGP     G  CETCHG+F  CPGHYGYL L LPV+NVGY   ++++LKCICK C+ I
Sbjct: 65   PRMGPPNKNGG--CETCHGNFRECPGHYGYLVLTLPVYNVGYLGTVVDLLKCICKCCSSI 122

Query: 1640 LLSEKERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKS 1482
            LL +KER  +LKKMRNP+ E L K+   K ++K C       K  TCS+CGY+N   +K 
Sbjct: 123  LLDDKERRVFLKKMRNPRTEPLMKSELQKKVVKKCTSMTSGQKSVTCSKCGYMNGMVKKG 182

Query: 1481 R 1479
            +
Sbjct: 183  Q 183


>ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Nicotiana tomentosiformis]
            gi|697112870|ref|XP_009610318.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 1390

 Score =  638 bits (1646), Expect(2) = 0.0
 Identities = 331/469 (70%), Positives = 379/469 (80%), Gaps = 11/469 (2%)
 Frame = -1

Query: 1465 IIHDRSKKFTDDTDKECKAALSG-----TRIQI---LNPDRVLGLFKRILDQDCELLYLS 1310
            IIH+R  +F D    E  AA+S      T + +   ++P  V  LFK + D+DCELLYLS
Sbjct: 186  IIHERGNRFLD----EFNAAISHKIELKTSVSVPPEIDPKAVYSLFKNMSDEDCELLYLS 241

Query: 1309 DRPEKLIITDILVPPIPIRPSSFVDGG-RSNEDDITSKLNTIIQTNASLRQDLDGKKSTS 1133
            DRPEKL++T I VPPI IRPS FVDGG +SNE+DIT +L  IIQ NA L +D+      +
Sbjct: 242  DRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANARLLEDISDTSFQN 301

Query: 1132 QCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEY 953
            + L  W  LQ+EVAQYINS+VRGVPL + Q+SKP+ GF QRLKGKQGRFRGNL GKRVEY
Sbjct: 302  KSLSAWVDLQMEVAQYINSDVRGVPLHL-QASKPMSGFTQRLKGKQGRFRGNLSGKRVEY 360

Query: 952  TARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSII- 776
            T RTVISPDPNLKITEV IPIL+A+ILTYPE VSQHNIEKLR+CV NG  KYPGAK I  
Sbjct: 361  TGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIKH 420

Query: 775  -SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMPWR 599
                 + ++   RK  A  LKFG IV+RHLEDGD+VLFNRQ SLHRMSIM HRA+IMPWR
Sbjct: 421  PDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 480

Query: 598  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 419
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQD
Sbjct: 481  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQD 540

Query: 418  FLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGKQLFSVLVRP 239
            FLTSSFLITR+DTFY+RASF+L+C+YMGD +  +DLP PALIKPVELWTGKQLF VL+RP
Sbjct: 541  FLTSSFLITRKDTFYERASFSLICSYMGDGMDPIDLPTPALIKPVELWTGKQLFGVLLRP 600

Query: 238  RAQMRVYVNLTVTEKPYKQGKETLCPNEGFVYFQNSELICGQVGKATLG 92
             ++MRVYVNLTVTEK Y    ET+CP++GFVYF+NSELI GQ+GKATLG
Sbjct: 601  YSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLG 649



 Score =  203 bits (516), Expect(2) = 0.0
 Identities = 97/181 (53%), Positives = 123/181 (67%), Gaps = 7/181 (3%)
 Frame = -3

Query: 2000 QAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLD 1821
            Q   QFTKQPY+EDVGPRKI+SI+FS+ S  EI+K  EV+VY   +Y+  +KP  N LLD
Sbjct: 5    QEIIQFTKQPYIEDVGPRKIKSIQFSLFSEAEILKLGEVEVYRGVYYESTKKPIPNGLLD 64

Query: 1820 SRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARI 1641
             RMGP     G  CETCHG+F  CPGHYGYL L LPV+NVGY   ++++LKCICK C+ I
Sbjct: 65   PRMGPPNKNGG--CETCHGNFRECPGHYGYLVLTLPVYNVGYLGTVVDLLKCICKCCSSI 122

Query: 1640 LLSEKERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKS 1482
            LL +KE   +LKKMRNP+ E L K+   K ++K C       K  TCS+CGY+N   +K 
Sbjct: 123  LLDDKECRVFLKKMRNPRTEPLMKSELQKKVVKKCTSMTSGQKTVTCSKCGYMNGMVKKG 182

Query: 1481 R 1479
            +
Sbjct: 183  Q 183


>ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Nicotiana tomentosiformis]
            gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 1375

 Score =  638 bits (1646), Expect(2) = 0.0
 Identities = 331/469 (70%), Positives = 379/469 (80%), Gaps = 11/469 (2%)
 Frame = -1

Query: 1465 IIHDRSKKFTDDTDKECKAALSG-----TRIQI---LNPDRVLGLFKRILDQDCELLYLS 1310
            IIH+R  +F D    E  AA+S      T + +   ++P  V  LFK + D+DCELLYLS
Sbjct: 186  IIHERGNRFLD----EFNAAISHKIELKTSVSVPPEIDPKAVYSLFKNMSDEDCELLYLS 241

Query: 1309 DRPEKLIITDILVPPIPIRPSSFVDGG-RSNEDDITSKLNTIIQTNASLRQDLDGKKSTS 1133
            DRPEKL++T I VPPI IRPS FVDGG +SNE+DIT +L  IIQ NA L +D+      +
Sbjct: 242  DRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANARLLEDISDTSFQN 301

Query: 1132 QCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEY 953
            + L  W  LQ+EVAQYINS+VRGVPL + Q+SKP+ GF QRLKGKQGRFRGNL GKRVEY
Sbjct: 302  KSLSAWVDLQMEVAQYINSDVRGVPLHL-QASKPMSGFTQRLKGKQGRFRGNLSGKRVEY 360

Query: 952  TARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSII- 776
            T RTVISPDPNLKITEV IPIL+A+ILTYPE VSQHNIEKLR+CV NG  KYPGAK I  
Sbjct: 361  TGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIKH 420

Query: 775  -SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMPWR 599
                 + ++   RK  A  LKFG IV+RHLEDGD+VLFNRQ SLHRMSIM HRA+IMPWR
Sbjct: 421  PDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 480

Query: 598  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 419
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQD
Sbjct: 481  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQD 540

Query: 418  FLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGKQLFSVLVRP 239
            FLTSSFLITR+DTFY+RASF+L+C+YMGD +  +DLP PALIKPVELWTGKQLF VL+RP
Sbjct: 541  FLTSSFLITRKDTFYERASFSLICSYMGDGMDPIDLPTPALIKPVELWTGKQLFGVLLRP 600

Query: 238  RAQMRVYVNLTVTEKPYKQGKETLCPNEGFVYFQNSELICGQVGKATLG 92
             ++MRVYVNLTVTEK Y    ET+CP++GFVYF+NSELI GQ+GKATLG
Sbjct: 601  YSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLG 649



 Score =  203 bits (516), Expect(2) = 0.0
 Identities = 97/181 (53%), Positives = 123/181 (67%), Gaps = 7/181 (3%)
 Frame = -3

Query: 2000 QAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLD 1821
            Q   QFTKQPY+EDVGPRKI+SI+FS+ S  EI+K  EV+VY   +Y+  +KP  N LLD
Sbjct: 5    QEIIQFTKQPYIEDVGPRKIKSIQFSLFSEAEILKLGEVEVYRGVYYESTKKPIPNGLLD 64

Query: 1820 SRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARI 1641
             RMGP     G  CETCHG+F  CPGHYGYL L LPV+NVGY   ++++LKCICK C+ I
Sbjct: 65   PRMGPPNKNGG--CETCHGNFRECPGHYGYLVLTLPVYNVGYLGTVVDLLKCICKCCSSI 122

Query: 1640 LLSEKERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKS 1482
            LL +KE   +LKKMRNP+ E L K+   K ++K C       K  TCS+CGY+N   +K 
Sbjct: 123  LLDDKECRVFLKKMRNPRTEPLMKSELQKKVVKKCTSMTSGQKTVTCSKCGYMNGMVKKG 182

Query: 1481 R 1479
            +
Sbjct: 183  Q 183


>ref|XP_012835512.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit rpc1-like [Erythranthe guttatus]
          Length = 1405

 Score =  627 bits (1617), Expect(2) = 0.0
 Identities = 324/479 (67%), Positives = 382/479 (79%), Gaps = 11/479 (2%)
 Frame = -1

Query: 1495 VVKKAGTVMGIIHDRSKKFTDDTDKECKAALSGTR--------IQILNPDRVLGLFKRIL 1340
            +VKKA   + I HDR+K   D+   E ++AL+ T+        I  ++P     L + +L
Sbjct: 177  MVKKAKEPLKIQHDRAK-VVDNCLDERRSALAHTKDIKGNPVVISTIDPKTAYHLLENML 235

Query: 1339 DQDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQ 1160
            D+DCELLYL DRPEKLI+T+ILVPPI IRPS F     SNE+DITS+L  IIQ NA++ Q
Sbjct: 236  DEDCELLYLHDRPEKLIVTNILVPPIAIRPSVFSTRAMSNENDITSRLKQIIQINAAVLQ 295

Query: 1159 DLDGKKSTSQCL-GDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFR 983
            ++  + S SQ L  +W+ LQVEVAQYINS+VR VPL   +++KPL GFVQRLKGKQGRFR
Sbjct: 296  EMSDQSSQSQSLTNNWDSLQVEVAQYINSDVR-VPLQYSENTKPLSGFVQRLKGKQGRFR 354

Query: 982  GNLCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAY 803
            GNL GKRVE+T RTVISPDPNLKI EV +PIL+AQIL+YPE VS HNIE+LR+CV NG  
Sbjct: 355  GNLSGKRVEFTGRTVISPDPNLKINEVAVPILMAQILSYPERVSHHNIERLRQCVRNGPT 414

Query: 802  KYPGAKSII--SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIM 629
            KYPGAK I       + +  + R   A  LK+G IV RHL+DGD++LFNRQ SLHRMSIM
Sbjct: 415  KYPGAKFIKHPDGTEISLTGKIRHRAADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIM 474

Query: 628  CHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN 449
             HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN
Sbjct: 475  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN 534

Query: 448  GEILVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTG 269
            GEILVASTQDFLTSS+LITR+DTFYDRASF+L+C+YMGDA+  +DLP PAL+KPVELWTG
Sbjct: 535  GEILVASTQDFLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVELWTG 594

Query: 268  KQLFSVLVRPRAQMRVYVNLTVTEKPYKQGKETLCPNEGFVYFQNSELICGQVGKATLG 92
            KQLFS+L+RP A+MRVYVNLTV EK Y +  ET+CP +GFVY +NSELI GQ+GKATLG
Sbjct: 595  KQLFSILLRPHAKMRVYVNLTVAEKNYGKSGETMCPKDGFVYIRNSELISGQLGKATLG 653



 Score =  207 bits (528), Expect(2) = 0.0
 Identities = 97/177 (54%), Positives = 128/177 (72%), Gaps = 7/177 (3%)
 Frame = -3

Query: 1988 QFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMG 1809
            QFTK+PYVEDVGPR+I+SI+FS  S  E++KA EV+V    +YD+NRKP  N LLD RMG
Sbjct: 8    QFTKRPYVEDVGPRRIESIQFSTFSAAEVLKAGEVEVNKIAYYDENRKPIDNGLLDQRMG 67

Query: 1808 PAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSE 1629
            PA     I+C+TC G F +CPGHYGYL L LPV+NVG+F  I++ILKCICK+C+R+LL++
Sbjct: 68   PANKS--ILCKTCGGKFVDCPGHYGYLPLALPVYNVGFFLTIIDILKCICKNCSRVLLAD 125

Query: 1628 KERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKSR 1479
            K+   +LK+MRNPK E L+K    K ++K C       +   CSRCGYIN   +K++
Sbjct: 126  KDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSLAGSKRAVKCSRCGYINGMVKKAK 182


>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Erythranthe guttata]
          Length = 1394

 Score =  627 bits (1617), Expect(2) = 0.0
 Identities = 324/479 (67%), Positives = 382/479 (79%), Gaps = 11/479 (2%)
 Frame = -1

Query: 1495 VVKKAGTVMGIIHDRSKKFTDDTDKECKAALSGTR--------IQILNPDRVLGLFKRIL 1340
            +VKKA   + I HDR+K   D+   E ++AL+ T+        I  ++P     L + +L
Sbjct: 177  MVKKAKEPLKIQHDRAK-VVDNCLDERRSALAHTKDIKGNPVVISTIDPKTAYHLLENML 235

Query: 1339 DQDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQ 1160
            D+DCELLYL DRPEKLI+T+ILVPPI IRPS F     SNE+DITS+L  IIQ NA++ Q
Sbjct: 236  DEDCELLYLHDRPEKLIVTNILVPPIAIRPSVFSTRAMSNENDITSRLKQIIQINAAVLQ 295

Query: 1159 DLDGKKSTSQCL-GDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFR 983
            ++  + S SQ L  +W+ LQVEVAQYINS+VR VPL   +++KPL GFVQRLKGKQGRFR
Sbjct: 296  EMSDQSSQSQSLTNNWDSLQVEVAQYINSDVR-VPLQYSENTKPLSGFVQRLKGKQGRFR 354

Query: 982  GNLCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAY 803
            GNL GKRVE+T RTVISPDPNLKI EV +PIL+AQIL+YPE VS HNIE+LR+CV NG  
Sbjct: 355  GNLSGKRVEFTGRTVISPDPNLKINEVAVPILMAQILSYPERVSHHNIERLRQCVRNGPT 414

Query: 802  KYPGAKSII--SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIM 629
            KYPGAK I       + +  + R   A  LK+G IV RHL+DGD++LFNRQ SLHRMSIM
Sbjct: 415  KYPGAKFIKHPDGTEISLTGKIRHRAADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIM 474

Query: 628  CHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN 449
             HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN
Sbjct: 475  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN 534

Query: 448  GEILVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTG 269
            GEILVASTQDFLTSS+LITR+DTFYDRASF+L+C+YMGDA+  +DLP PAL+KPVELWTG
Sbjct: 535  GEILVASTQDFLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVELWTG 594

Query: 268  KQLFSVLVRPRAQMRVYVNLTVTEKPYKQGKETLCPNEGFVYFQNSELICGQVGKATLG 92
            KQLFS+L+RP A+MRVYVNLTV EK Y +  ET+CP +GFVY +NSELI GQ+GKATLG
Sbjct: 595  KQLFSILLRPHAKMRVYVNLTVAEKNYGKSGETMCPKDGFVYIRNSELISGQLGKATLG 653



 Score =  207 bits (528), Expect(2) = 0.0
 Identities = 97/177 (54%), Positives = 128/177 (72%), Gaps = 7/177 (3%)
 Frame = -3

Query: 1988 QFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMG 1809
            QFTK+PYVEDVGPR+I+SI+FS  S  E++KA EV+V    +YD+NRKP  N LLD RMG
Sbjct: 8    QFTKRPYVEDVGPRRIESIQFSTFSAAEVLKAGEVEVNKIAYYDENRKPIDNGLLDQRMG 67

Query: 1808 PAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSE 1629
            PA     I+C+TC G F +CPGHYGYL L LPV+NVG+F  I++ILKCICK+C+R+LL++
Sbjct: 68   PANKS--ILCKTCGGKFVDCPGHYGYLPLALPVYNVGFFLTIIDILKCICKNCSRVLLAD 125

Query: 1628 KERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKSR 1479
            K+   +LK+MRNPK E L+K    K ++K C       +   CSRCGYIN   +K++
Sbjct: 126  KDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSLAGSKRAVKCSRCGYINGMVKKAK 182


>ref|XP_012854428.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Erythranthe guttatus]
          Length = 1412

 Score =  626 bits (1614), Expect(2) = 0.0
 Identities = 323/479 (67%), Positives = 382/479 (79%), Gaps = 11/479 (2%)
 Frame = -1

Query: 1495 VVKKAGTVMGIIHDRSKKFTDDTDKECKAALSGTR--------IQILNPDRVLGLFKRIL 1340
            +VKKA   + I HDR+K   D+   E ++AL+ T+        I  ++P     L + +L
Sbjct: 184  MVKKAKEPLKIQHDRAK-VVDNCLDERRSALAHTKDFKGNSMVISTIDPKTAYHLLENML 242

Query: 1339 DQDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQ 1160
            D+DCELLYL DRPEKLI+T+ILVPPI IRPS F     SNE+DITS+L  IIQ NA++ Q
Sbjct: 243  DEDCELLYLHDRPEKLIVTNILVPPIAIRPSVFSTRAMSNENDITSRLKQIIQINAAVLQ 302

Query: 1159 DLDGKKSTSQCL-GDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFR 983
            ++  + S SQ L  +W+ LQVEVAQYINS+VR VPL   +++KPL GFVQRLKGK GRFR
Sbjct: 303  EMSDQSSQSQSLTNNWDSLQVEVAQYINSDVR-VPLQYSENTKPLSGFVQRLKGKHGRFR 361

Query: 982  GNLCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAY 803
            GNL GKRVE+T RTVISPDPNLKI EV +PIL+AQIL+YPE VS HNIE+LR+CV NG  
Sbjct: 362  GNLSGKRVEFTGRTVISPDPNLKINEVAVPILMAQILSYPERVSHHNIERLRQCVRNGPT 421

Query: 802  KYPGAKSII--SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIM 629
            KYPGAK I       + + ++ R   A  LK+G IV RHL+DGD++LFNRQ SLHRMSIM
Sbjct: 422  KYPGAKFIKHPDGTEISLTSKVRHRHADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIM 481

Query: 628  CHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN 449
             HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN
Sbjct: 482  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN 541

Query: 448  GEILVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTG 269
            GEILVASTQDFLTSS+LITR+DTFYDRASF+L+C+YMGDA+  +DLP PAL+KPVELWTG
Sbjct: 542  GEILVASTQDFLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVELWTG 601

Query: 268  KQLFSVLVRPRAQMRVYVNLTVTEKPYKQGKETLCPNEGFVYFQNSELICGQVGKATLG 92
            KQLFS+L+RP A+MRVYVNLTV EK Y +  ET+CP +GFVY +NSELI GQ+GKATLG
Sbjct: 602  KQLFSILLRPHAKMRVYVNLTVAEKNYGKSGETMCPKDGFVYIRNSELISGQLGKATLG 660



 Score =  208 bits (529), Expect(2) = 0.0
 Identities = 98/177 (55%), Positives = 128/177 (72%), Gaps = 7/177 (3%)
 Frame = -3

Query: 1988 QFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMG 1809
            QFTK+PYVEDVGPR+I+SI+FS  S  E++KA EV+V    +YD+NRKP  N LLD RMG
Sbjct: 15   QFTKRPYVEDVGPRRIESIQFSTFSAAEVLKAGEVEVNKIAYYDENRKPIDNGLLDLRMG 74

Query: 1808 PAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSE 1629
            PA     I+C+TC G FA CPGHYGYL L LPV+NVG+F  I++ILKCICK+C+R+LL++
Sbjct: 75   PANKS--ILCKTCGGKFAECPGHYGYLPLALPVYNVGFFLTIIDILKCICKNCSRVLLAD 132

Query: 1628 KERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKSR 1479
            K+   +LK+MRNPK E L+K    K ++K C       +   CSRCGYIN   +K++
Sbjct: 133  KDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSLAGSKRAVKCSRCGYINGMVKKAK 189


>ref|XP_012854429.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Erythranthe guttatus]
            gi|848912313|ref|XP_012854431.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1-like isoform X2
            [Erythranthe guttatus] gi|848912315|ref|XP_012854432.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Erythranthe guttatus]
            gi|848912317|ref|XP_012854433.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1-like isoform X2
            [Erythranthe guttatus] gi|848912319|ref|XP_012854434.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Erythranthe guttatus]
          Length = 1405

 Score =  626 bits (1614), Expect(2) = 0.0
 Identities = 323/479 (67%), Positives = 382/479 (79%), Gaps = 11/479 (2%)
 Frame = -1

Query: 1495 VVKKAGTVMGIIHDRSKKFTDDTDKECKAALSGTR--------IQILNPDRVLGLFKRIL 1340
            +VKKA   + I HDR+K   D+   E ++AL+ T+        I  ++P     L + +L
Sbjct: 177  MVKKAKEPLKIQHDRAK-VVDNCLDERRSALAHTKDFKGNSMVISTIDPKTAYHLLENML 235

Query: 1339 DQDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQ 1160
            D+DCELLYL DRPEKLI+T+ILVPPI IRPS F     SNE+DITS+L  IIQ NA++ Q
Sbjct: 236  DEDCELLYLHDRPEKLIVTNILVPPIAIRPSVFSTRAMSNENDITSRLKQIIQINAAVLQ 295

Query: 1159 DLDGKKSTSQCL-GDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFR 983
            ++  + S SQ L  +W+ LQVEVAQYINS+VR VPL   +++KPL GFVQRLKGK GRFR
Sbjct: 296  EMSDQSSQSQSLTNNWDSLQVEVAQYINSDVR-VPLQYSENTKPLSGFVQRLKGKHGRFR 354

Query: 982  GNLCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAY 803
            GNL GKRVE+T RTVISPDPNLKI EV +PIL+AQIL+YPE VS HNIE+LR+CV NG  
Sbjct: 355  GNLSGKRVEFTGRTVISPDPNLKINEVAVPILMAQILSYPERVSHHNIERLRQCVRNGPT 414

Query: 802  KYPGAKSII--SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIM 629
            KYPGAK I       + + ++ R   A  LK+G IV RHL+DGD++LFNRQ SLHRMSIM
Sbjct: 415  KYPGAKFIKHPDGTEISLTSKVRHRHADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIM 474

Query: 628  CHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN 449
             HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN
Sbjct: 475  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN 534

Query: 448  GEILVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTG 269
            GEILVASTQDFLTSS+LITR+DTFYDRASF+L+C+YMGDA+  +DLP PAL+KPVELWTG
Sbjct: 535  GEILVASTQDFLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVELWTG 594

Query: 268  KQLFSVLVRPRAQMRVYVNLTVTEKPYKQGKETLCPNEGFVYFQNSELICGQVGKATLG 92
            KQLFS+L+RP A+MRVYVNLTV EK Y +  ET+CP +GFVY +NSELI GQ+GKATLG
Sbjct: 595  KQLFSILLRPHAKMRVYVNLTVAEKNYGKSGETMCPKDGFVYIRNSELISGQLGKATLG 653



 Score =  208 bits (529), Expect(2) = 0.0
 Identities = 98/177 (55%), Positives = 128/177 (72%), Gaps = 7/177 (3%)
 Frame = -3

Query: 1988 QFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMG 1809
            QFTK+PYVEDVGPR+I+SI+FS  S  E++KA EV+V    +YD+NRKP  N LLD RMG
Sbjct: 8    QFTKRPYVEDVGPRRIESIQFSTFSAAEVLKAGEVEVNKIAYYDENRKPIDNGLLDLRMG 67

Query: 1808 PAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSE 1629
            PA     I+C+TC G FA CPGHYGYL L LPV+NVG+F  I++ILKCICK+C+R+LL++
Sbjct: 68   PANKS--ILCKTCGGKFAECPGHYGYLPLALPVYNVGFFLTIIDILKCICKNCSRVLLAD 125

Query: 1628 KERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKSR 1479
            K+   +LK+MRNPK E L+K    K ++K C       +   CSRCGYIN   +K++
Sbjct: 126  KDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSLAGSKRAVKCSRCGYINGMVKKAK 182


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Solanum
            lycopersicum]
          Length = 1390

 Score =  625 bits (1613), Expect(2) = 0.0
 Identities = 327/467 (70%), Positives = 376/467 (80%), Gaps = 9/467 (1%)
 Frame = -1

Query: 1465 IIHDRSKKFTDDTD------KECKAALSGTRIQILNPDRVLGLFKRILDQDCELLYLSDR 1304
            I H++  +  D+ +      +E +A++S      ++P  V  LFK + D+DCELLYLSDR
Sbjct: 186  ITHEQGNRILDEINVAISDKRELRASVSVP--PEIDPKVVYSLFKNMSDEDCELLYLSDR 243

Query: 1303 PEKLIITDILVPPIPIRPSSFVDGG-RSNEDDITSKLNTIIQTNASLRQDLDGKKSTSQC 1127
            PEKL++T I VPPI IRPS FVDGG +SNE+DIT +L  IIQ NASL Q++    S  + 
Sbjct: 244  PEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDS-SPVKS 302

Query: 1126 LGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEYTA 947
            L  W  LQ+EVAQYINS+VRGVPL M Q  +PL GF QRLKGKQGRFRGNL GKRVEYT 
Sbjct: 303  LNQWIDLQMEVAQYINSDVRGVPLQM-QPPRPLSGFTQRLKGKQGRFRGNLSGKRVEYTG 361

Query: 946  RTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSII--S 773
            RTVISPDPNLKITEV IPIL+AQILTYPE VSQHNIEKLR+CV NG  KYPGAK I    
Sbjct: 362  RTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHPD 421

Query: 772  AGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMPWRTL 593
               + ++   RK  A  LKFG IV+RHLEDGD+VLFNRQ SLHRMSIM HRA+IMPWRTL
Sbjct: 422  GNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTL 481

Query: 592  RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFL 413
            RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDFL
Sbjct: 482  RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDFL 541

Query: 412  TSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGKQLFSVLVRPRA 233
            TSSFLITR+DTFY+RASF+L+C+YMGDA+   DLP+PA IKPVELWTGKQLF VL+RP +
Sbjct: 542  TSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHVLLRPYS 601

Query: 232  QMRVYVNLTVTEKPYKQGKETLCPNEGFVYFQNSELICGQVGKATLG 92
            +MRVYVNLT+TEK Y    ET+C ++GFVYF+NSELI GQ+GKATLG
Sbjct: 602  KMRVYVNLTLTEKSYSGKGETMCSSDGFVYFRNSELISGQLGKATLG 648



 Score =  206 bits (524), Expect(2) = 0.0
 Identities = 101/182 (55%), Positives = 128/182 (70%), Gaps = 7/182 (3%)
 Frame = -3

Query: 2009 SEAQAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNA 1830
            + AQ   Q TKQPY+EDVGPRKI+SIKFS+ S  EI+K +EV+VY   +Y+  +KP +N 
Sbjct: 2    NRAQESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQNG 61

Query: 1829 LLDSRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSC 1650
            LLD RMGP  +K G  CETCHG+F  CPGHYGYL L LPV+NVGY   +++ILKCICK C
Sbjct: 62   LLDPRMGPP-NKSGC-CETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCC 119

Query: 1649 ARILLSEKERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACS 1491
            + ILL +KER   LKKMRNP+ E L+K+   K ++K C       K  TCS+CGY+N   
Sbjct: 120  SSILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTATCSKCGYMNGMV 179

Query: 1490 EK 1485
            +K
Sbjct: 180  KK 181


>ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Elaeis
            guineensis]
          Length = 1369

 Score =  608 bits (1567), Expect(2) = 0.0
 Identities = 321/478 (67%), Positives = 376/478 (78%), Gaps = 10/478 (2%)
 Frame = -1

Query: 1495 VVKKAGTVMGIIHDRSKKFTDDTDKECKAALSGTRIQ-------ILNPDRVLGLFKRILD 1337
            VVKKA + +  I D SK   D + +E ++ALS T+ +       +L+   VL LF+++LD
Sbjct: 168  VVKKARSGLYFIQDFSKT-ADPSVEEFRSALSHTKDKTSFQVSHVLSAVAVLSLFRKMLD 226

Query: 1336 QDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRS-NEDDITSKLNTIIQTNASLRQ 1160
            +DCELL L DRPEKLI+T I VPP+ IRPS  VD GRS NED+ITS L  II TN+ LR+
Sbjct: 227  EDCELLNLYDRPEKLIVTHIAVPPVSIRPSVIVDSGRSSNEDNITSILKNIINTNSILRE 286

Query: 1159 DLDGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRG 980
            DL+G     +CL  W  LQ++V +YINSE   +P S        RG VQRLKGKQGRFRG
Sbjct: 287  DLEGAAPPFKCLDCWTHLQIQVVEYINSEAPCIPDSKH------RGLVQRLKGKQGRFRG 340

Query: 979  NLCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYK 800
            NL GKRVE+T RTVISPDPNLKITEV IPIL+A++LTYPE VS +NIEKLR+ V NG  K
Sbjct: 341  NLSGKRVEFTGRTVISPDPNLKITEVAIPILMARVLTYPERVSNYNIEKLRQLVRNGPSK 400

Query: 799  YPGAKSIISA-GSVWILNRRRKSD-AYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMC 626
            YPGA  ++   GS   L    K D A  LK+G +VERHLEDGD+VLFNRQ SLHRMSIMC
Sbjct: 401  YPGANFVLRPDGSKVHLRYVDKRDIANELKYGYVVERHLEDGDIVLFNRQPSLHRMSIMC 460

Query: 625  HRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG 446
            HRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNG
Sbjct: 461  HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNG 520

Query: 445  EILVASTQDFLTSSFLITRRDTFYDRASFALMCTYMGDAI*SVDLPAPALIKPVELWTGK 266
            EILVASTQDFLTSSFLITR+DTFYDRA+F+LMC+YMGDA+  +DLP PA+IKP+ELWTGK
Sbjct: 521  EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDAMDPIDLPTPAIIKPIELWTGK 580

Query: 265  QLFSVLVRPRAQMRVYVNLTVTEKPYKQGKETLCPNEGFVYFQNSELICGQVGKATLG 92
            QLF+VL+RP A  RV++NL V EK Y +  ET+CPN+G VYF+NSELICGQ+GKATLG
Sbjct: 581  QLFNVLIRPNANTRVFLNLIVKEKIYSK-SETMCPNDGCVYFRNSELICGQLGKATLG 637



 Score =  219 bits (559), Expect(2) = 0.0
 Identities = 105/175 (60%), Positives = 126/175 (72%)
 Frame = -3

Query: 2000 QAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLD 1821
            Q + + TK+PY+EDVGPRKI+SI+FS  SG EI K +EVQV+++  YD N KP +N LLD
Sbjct: 2    QEKLRCTKEPYIEDVGPRKIKSIRFSTFSGEEIRKLAEVQVWNNRIYDLNLKPIENGLLD 61

Query: 1820 SRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARI 1641
             RMG    +    C TCHG+F +CPGH+GYL L LPVFNVGYFN+ILNILKCICK C RI
Sbjct: 62   PRMGAPNRQTE--CATCHGNFTDCPGHFGYLKLTLPVFNVGYFNSILNILKCICKGCGRI 119

Query: 1640 LLSEKERVSYLKKMRNPKAEALQKTATAKAILKSCKPETCSRCGYINACSEKSRN 1476
            LL E  R SYLKKMRNPKA+  QK A  K +   CKP  C RCGY N   +K+R+
Sbjct: 120  LLDETLRKSYLKKMRNPKADIFQKNALMKMVRDKCKPSRCLRCGYANGVVKKARS 174