BLASTX nr result
ID: Papaver29_contig00018854
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00018854
(2123 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009592632.1| PREDICTED: putative pentatricopeptide repeat... 98 3e-20
ref|XP_010529910.1| PREDICTED: pentatricopeptide repeat-containi... 99 4e-20
ref|XP_002526170.1| pentatricopeptide repeat-containing protein,... 105 1e-19
ref|XP_012481935.1| PREDICTED: pentatricopeptide repeat-containi... 105 2e-19
ref|XP_012481933.1| PREDICTED: pentatricopeptide repeat-containi... 105 2e-19
ref|XP_012481932.1| PREDICTED: pentatricopeptide repeat-containi... 105 2e-19
gb|KJB28422.1| hypothetical protein B456_005G047000 [Gossypium r... 105 2e-19
ref|XP_012487249.1| PREDICTED: pentatricopeptide repeat-containi... 98 4e-19
ref|XP_007035007.1| Pentatricopeptide repeat superfamily protein... 102 1e-18
ref|XP_007035008.1| Pentatricopeptide repeat superfamily protein... 100 2e-18
ref|XP_010529887.1| PREDICTED: pentatricopeptide repeat-containi... 96 2e-18
ref|XP_012831521.1| PREDICTED: pentatricopeptide repeat-containi... 96 3e-18
ref|XP_010541012.1| PREDICTED: pentatricopeptide repeat-containi... 100 5e-18
ref|XP_009611078.1| PREDICTED: putative pentatricopeptide repeat... 91 6e-18
ref|XP_010539050.1| PREDICTED: pentatricopeptide repeat-containi... 96 1e-17
ref|XP_010539051.1| PREDICTED: pentatricopeptide repeat-containi... 96 1e-17
pdb|4OZS|A Chain A, Rna Binding Protein 99 1e-17
ref|XP_011032518.1| PREDICTED: putative pentatricopeptide repeat... 99 1e-17
ref|XP_010541010.1| PREDICTED: pentatricopeptide repeat-containi... 99 1e-17
gb|KDO45527.1| hypothetical protein CISIN_1g040279mg [Citrus sin... 99 1e-17
>ref|XP_009592632.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Nicotiana tomentosiformis]
gi|697167543|ref|XP_009592633.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g12700,
mitochondrial [Nicotiana tomentosiformis]
gi|697167545|ref|XP_009592634.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g12700,
mitochondrial [Nicotiana tomentosiformis]
Length = 595
Score = 98.2 bits (243), Expect(2) = 3e-20
Identities = 57/138 (41%), Positives = 85/138 (61%), Gaps = 6/138 (4%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
KL EAM+ F + Q G KP +VTYN +L GL+ GR+GSA+ F EM S L P T+G
Sbjct: 371 KLAEAMQFFHEISQKGSKPDIVTYNTVLQGLFEVGRIGSAKKFFDEMLSMGLVPDLCTHG 430
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQ--IFFDEI 1768
T+L+G K G ++EA++L+ E VK++I+ +NVVI+G + N K+ + F+++
Sbjct: 431 TLLNGYFKYGLVDEAMSLFNELERKRVKSDIEFYNVVINGLCK---NGKLDEAHAIFEKL 487
Query: 1767 PDRGLVP----YTMIYSG 1726
GL+P YT I +G
Sbjct: 488 SFIGLLPNVRTYTTIING 505
Score = 30.4 bits (67), Expect(2) = 3e-20
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -1
Query: 1733 TLGNGILFEANNEQSN---LRNERDGFLPDARTYGTIIQGFLGAT*TTGHCNFFMTFMKE 1563
T+ NG+ E +++ + E DG LP+ TY I QGFL + TFMKE
Sbjct: 501 TIINGLCLEGLLDEAKDMLRKMEDDGCLPNCITYNVIAQGFL----RCNRISEMATFMKE 556
Score = 78.2 bits (191), Expect(2) = 5e-12
Identities = 39/125 (31%), Positives = 70/125 (56%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ +A ++ +++ + G +P +VTYN+++ G G++ A+ +F M C+ P+ ++Y
Sbjct: 301 KVEDAEEVMRHMIEKGVEPDIVTYNVIMGGCCLCGQMDRARRIFDIMIDKCIEPNIISYR 360
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
+++G CK L EA+ + K +I T+N V+ G FE V + FFDE+
Sbjct: 361 ILINGYCKKKKLAEAMQFFHEISQKGSKPDIVTYNTVLQGLFE-VGRIGSAKKFFDEMLS 419
Query: 1761 RGLVP 1747
GLVP
Sbjct: 420 MGLVP 424
Score = 22.7 bits (47), Expect(2) = 5e-12
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 1667 GFLPDARTYGTIIQGF 1620
G +PD T+GT++ G+
Sbjct: 421 GLVPDLCTHGTLLNGY 436
Score = 68.6 bits (166), Expect(2) = 3e-09
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
L A+ L LK+ G P ++TYN L+ GL + G+ + LF+EM + + P T+
Sbjct: 232 LDTAINLLNELKKKGIPPNIITYNSLIDGLCKFGQWEKVRILFSEMVNHNIYPDVHTFNI 291
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGF-----FERVANWKMQQIFFD 1774
++DGLCK G +E+A + + V+ +I T+NV++ G +R ++ I D
Sbjct: 292 VIDGLCKEGKVEDAEEVMRHMIEKGVEPDIVTYNVIMGGCCLCGQMDRAR--RIFDIMID 349
Query: 1773 EIPDRGLVPYTMIYSG 1726
+ + ++ Y ++ +G
Sbjct: 350 KCIEPNIISYRILING 365
Score = 22.7 bits (47), Expect(2) = 3e-09
Identities = 12/41 (29%), Positives = 16/41 (39%)
Frame = -1
Query: 1667 GFLPDARTYGTIIQGFLGAT*TTGHCNFFMTFMKENLYPGI 1545
G PD TY T++QG FF + L P +
Sbjct: 386 GSKPDIVTYNTVLQGLFEVGRIGSAKKFFDEMLSMGLVPDL 426
Score = 67.0 bits (162), Expect = 6e-08
Identities = 33/98 (33%), Positives = 55/98 (56%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
EAM LF L++ K + YN+++ GL ++G++ A +F ++ L P+ TY T++
Sbjct: 444 EAMSLFNELERKRVKSDIEFYNVVINGLCKNGKLDEAHAIFEKLSFIGLLPNVRTYTTII 503
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGF 1819
+GLC G L+EA + + E N T+NV+ GF
Sbjct: 504 NGLCLEGLLDEAKDMLRKMEDDGCLPNCITYNVIAQGF 541
Score = 63.2 bits (152), Expect = 9e-07
Identities = 29/95 (30%), Positives = 54/95 (56%)
Frame = -3
Query: 2106 MKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLDG 1927
+ L + ++Q KP + YNI++ L +D + +A L E+K + P+ +TY +++DG
Sbjct: 201 LSLLRVMEQGNTKPDICIYNIVIDALCKDRNLDTAINLLNELKKKGIPPNIITYNSLIDG 260
Query: 1926 LCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHG 1822
LCK G E+ L+ + ++ ++ T N+VI G
Sbjct: 261 LCKFGQWEKVRILFSEMVNHNIYPDVHTFNIVIDG 295
Score = 61.2 bits (147), Expect = 4e-06
Identities = 33/124 (26%), Positives = 64/124 (51%)
Frame = -3
Query: 2100 LFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLDGLC 1921
LF + + P V T+NI++ GL ++G+V A+ + M + P VTY ++ G C
Sbjct: 273 LFSEMVNHNIYPDVHTFNIVIDGLCKEGKVEDAEEVMRHMIEKGVEPDIVTYNVIMGGCC 332
Query: 1920 KNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGLVPYT 1741
G ++ A ++ ++ NI ++ ++I+G+ ++ + Q FF EI +G P
Sbjct: 333 LCGQMDRARRIFDIMIDKCIEPNIISYRILINGYCKKKKLAEAMQ-FFHEISQKGSKPDI 391
Query: 1740 MIYS 1729
+ Y+
Sbjct: 392 VTYN 395
>ref|XP_010529910.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like
[Tarenaya hassleriana] gi|729310375|ref|XP_010529911.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Tarenaya hassleriana]
Length = 636
Score = 99.0 bits (245), Expect(2) = 4e-20
Identities = 48/131 (36%), Positives = 76/131 (58%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
++ E M LF + Q G +TYNIL+ G YR G + +AQ LF EM P+ +TY
Sbjct: 416 RVKEGMNLFYEMSQRGLDVDSITYNILIQGFYRVGNLDAAQKLFREMHYNRHHPNLITYS 475
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
+LDGLCKNG +EA+ LY + + + +I +HN+++HG +V +FFD + +
Sbjct: 476 ILLDGLCKNGKTDEALGLYNKLQKSGIDLHISSHNIMMHGLC-KVGRVDEVFVFFDRLLE 534
Query: 1761 RGLVPYTMIYS 1729
+G+ P + Y+
Sbjct: 535 KGVRPNVITYN 545
Score = 29.3 bits (64), Expect(2) = 4e-20
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 1727 GNGILFEANNEQSNLRNERDGFLPDARTYGTIIQGFLG 1614
G G L+E ++ DG PDA TY +I+G LG
Sbjct: 553 GKGSLYEVEKVIGKMKE--DGCFPDAVTYNALIRGRLG 588
Score = 71.2 bits (173), Expect = 3e-09
Identities = 39/128 (30%), Positives = 66/128 (51%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
EA +L++ + Q G P +TY L+ G R R+G A+ +F M + P+ VT+ +M+
Sbjct: 349 EAEELYEEMIQKGLVPNTITYTSLINGFCRQNRLGEAEQMFNYMVTKGCFPNRVTFNSMI 408
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGL 1753
+G CK ++E + L+ + + T+N++I GF+ RV N Q F E+
Sbjct: 409 NGYCKANRVKEGMNLFYEMSQRGLDVDSITYNILIQGFY-RVGNLDAAQKLFREMHYNRH 467
Query: 1752 VPYTMIYS 1729
P + YS
Sbjct: 468 HPNLITYS 475
Score = 66.2 bits (160), Expect = 1e-07
Identities = 36/138 (26%), Positives = 73/138 (52%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
L A KLF+ + N P ++TY+ILL GL ++G+ A L+ +++ + ++
Sbjct: 452 LDAAQKLFREMHYNRHHPNLITYSILLDGLCKNGKTDEALGLYNKLQKSGIDLHISSHNI 511
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDR 1759
M+ GLCK G ++E + V+ N+ T+N++I G + + ++++++ ++ +
Sbjct: 512 MMHGLCKVGRVDEVFVFFDRLLEKGVRPNVITYNIMISGLCGKGSLYEVEKV-IGKMKED 570
Query: 1758 GLVPYTMIYSGQWNFIRG 1705
G P + Y+ IRG
Sbjct: 571 GCFPDAVTYNA---LIRG 585
Score = 61.6 bits (148), Expect = 3e-06
Identities = 39/134 (29%), Positives = 65/134 (48%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
+ +AM LF+ + G P VVTY L+ G R GR L +EM ++P VT+
Sbjct: 277 MDDAMNLFEVMDNVGIVPDVVTYTSLITGFSRFGRWDDVTRLLSEMVKRKITPDVVTFSG 336
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDR 1759
++D L K G EA LY+ + N T+ +I+GF + + +Q+ F+ + +
Sbjct: 337 LIDALFKEGRFWEAEELYEEMIQKGLVPNTITYTSLINGFCRQNRLGEAEQM-FNYMVTK 395
Query: 1758 GLVPYTMIYSGQWN 1717
G P + ++ N
Sbjct: 396 GCFPNRVTFNSMIN 409
Score = 60.8 bits (146), Expect = 5e-06
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Frame = -3
Query: 2109 AMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVT------ 1948
A+ L + ++G+KP VVT+N L+ GL + RV A L +M P+ VT
Sbjct: 175 ALSLVDQMLKDGYKPNVVTFNTLVNGLCLEDRVSQALILLDQMLKMDCQPNRVTFSIVIN 234
Query: 1947 -----------------------------YGTMLDGLCKNGHLEEAIALYKTAESTSVKA 1855
Y ++D LCK GH+++A+ L++ ++ +
Sbjct: 235 RVCKAGDFGLAMDLVTKMEEIHIEIDVIIYNIIIDLLCKAGHMDDAMNLFEVMDNVGIVP 294
Query: 1854 NIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGLVPYTMIYSG 1726
++ T+ +I G F R W E+ R + P + +SG
Sbjct: 295 DVVTYTSLITG-FSRFGRWDDVTRLLSEMVKRKITPDVVTFSG 336
>ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534547|gb|EEF36246.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 504
Score = 105 bits (263), Expect = 1e-19
Identities = 54/131 (41%), Positives = 81/131 (61%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K EAM LF+ ++ P++ TY ILL LY++GR+ +A+ LF M+ SPS TY
Sbjct: 269 KTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYT 328
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
+LDGLCKNG +EEAI ++++ +S K +I ++++I G F+ W+ FDEIP
Sbjct: 329 VLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQ-ARRWESAMEIFDEIPT 387
Query: 1761 RGLVPYTMIYS 1729
GLVP + Y+
Sbjct: 388 VGLVPNIVTYN 398
Score = 72.4 bits (176), Expect = 2e-09
Identities = 36/102 (35%), Positives = 62/102 (60%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
+ EA+ +F++LK +KP++ Y+IL+ G+++ R SA +F E+ + L P+ VTY
Sbjct: 340 IEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNI 399
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFE 1813
M++GLCK G L EA L+ E + + + + N +I GF +
Sbjct: 400 MINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQ 441
Score = 65.1 bits (157), Expect = 2e-07
Identities = 34/127 (26%), Positives = 65/127 (51%)
Frame = -3
Query: 2109 AMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLD 1930
A++L + + TY +++ L +DG +F EM + + P+ + Y ++++
Sbjct: 63 AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLIN 122
Query: 1929 GLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGLV 1750
GLC+ G L EA+ L+ S +KAN+ T+N +IH R WK F ++ G++
Sbjct: 123 GLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASC-RFGLWKEATRTFSQMVGEGIL 181
Query: 1749 PYTMIYS 1729
P + ++
Sbjct: 182 PDVVTFT 188
Score = 60.1 bits (144), Expect = 8e-06
Identities = 33/100 (33%), Positives = 52/100 (52%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
KL EA+ LF + G K V+TYN L+ R G A F++M + P VT+
Sbjct: 129 KLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFT 188
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHG 1822
T++D L K G ++EA +++ NI T+N +++G
Sbjct: 189 TLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNG 228
Score = 60.1 bits (144), Expect = 8e-06
Identities = 29/98 (29%), Positives = 55/98 (56%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
EA + F + G P VVT+ L+ L + G+V A +F M +P+ VTY ++L
Sbjct: 167 EATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLL 226
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGF 1819
+GLC + ++ A+ L++ +K ++ ++N +I+G+
Sbjct: 227 NGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGY 264
>ref|XP_012481935.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X3 [Gossypium raimondii]
Length = 509
Score = 105 bits (261), Expect = 2e-19
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ EA +LF+ K +G KPT+VTYN L+ L+++G+V +AQ +F EM + SP+ TY
Sbjct: 289 KMDEAFELFQ--KMHGIKPTIVTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYT 346
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
MLDGLCK+GH+EEA+ L+ + EST+ K +I+ +++I G + R + + F EI +
Sbjct: 347 VMLDGLCKHGHIEEALDLFHSLESTNKKPSIEHFSILIDGMW-RAGKSEEARKMFTEISE 405
Query: 1761 RGL----VPYTMIYSG 1726
+GL V Y ++ SG
Sbjct: 406 KGLSLDVVTYNIMLSG 421
Score = 80.5 bits (197), Expect = 6e-12
Identities = 42/128 (32%), Positives = 70/128 (54%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
EA+K+F + +NG P VVT+ L+ L ++G+ G AQ +F M P TY ++L
Sbjct: 187 EAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIRQGAKPDIRTYNSLL 246
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGL 1753
GLC NGHL+EA L+ ++ + ++N++I G+ + +WKM + F G+
Sbjct: 247 SGLCSNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCK---SWKMDEAFELFQKMHGI 303
Query: 1752 VPYTMIYS 1729
P + Y+
Sbjct: 304 KPTIVTYN 311
Score = 70.5 bits (171), Expect(2) = 9e-10
Identities = 34/127 (26%), Positives = 73/127 (57%)
Frame = -3
Query: 2109 AMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLD 1930
A++L + ++ + + T++T+++++ +DG V A ++F+EM S +SP V YG+++
Sbjct: 83 ALELHRKMENSSCQGTLLTFSMVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIH 142
Query: 1929 GLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGLV 1750
G C G L+EA+ ++ S + ++ +N +IHGF + V W F+ + + G+
Sbjct: 143 GFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFCQ-VGMWGEAVKIFNRMVENGIS 201
Query: 1749 PYTMIYS 1729
P + ++
Sbjct: 202 PDVVTFT 208
Score = 22.7 bits (47), Expect(2) = 9e-10
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 1673 RDGFLPDARTYGTIIQG 1623
R G PD RTY +++ G
Sbjct: 232 RQGAKPDIRTYNSLLSG 248
Score = 63.2 bits (152), Expect = 9e-07
Identities = 35/99 (35%), Positives = 53/99 (53%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
+ EA+ LF +L+ KP++ ++IL+ G++R G+ A+ +FTE+ LS VTY
Sbjct: 358 IEEALDLFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNI 417
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHG 1822
ML GLCK EA L E + + N +IHG
Sbjct: 418 MLSGLCKQSMSLEANKLLMEMEEKGCVPDSISFNTLIHG 456
Score = 62.4 bits (150), Expect = 2e-06
Identities = 36/131 (27%), Positives = 68/131 (51%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ +A+++F + + GF+ V Y IL+ GL G G A L +M++ + +T+
Sbjct: 44 KVLDAVQVFDKMCERGFQGDGVIYGILINGLCSIGHPGMALELHRKMENSSCQGTLLTFS 103
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
++D CK+G ++ A +++ S + + + +IHGF + K FDE+
Sbjct: 104 MVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIHGFC-GLGRLKEAVNVFDEMVS 162
Query: 1761 RGLVPYTMIYS 1729
RGL P ++Y+
Sbjct: 163 RGLTPDLIMYN 173
Score = 60.1 bits (144), Expect(2) = 2e-06
Identities = 32/94 (34%), Positives = 54/94 (57%)
Frame = -3
Query: 2100 LFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLDGLC 1921
+F + + GF+P +VT +ILL G+ DG+V A +F +M V YG +++GLC
Sbjct: 16 VFGEIIKRGFEPDLVTVSILLKGMCVDGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 75
Query: 1920 KNGHLEEAIALYKTAESTSVKANIDTHNVVIHGF 1819
GH A+ L++ E++S + + T ++VI F
Sbjct: 76 SIGHPGMALELHRKMENSSCQGTLLTFSMVIDAF 109
Score = 21.6 bits (44), Expect(2) = 2e-06
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 1727 GNGILFEANNEQSNLRNERDGFLPDARTYGTIIQGF 1620
G G L EA N + + G PD Y T+I GF
Sbjct: 146 GLGRLKEAVNVFDEMVSR--GLTPDLIMYNTLIHGF 179
>ref|XP_012481933.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X2 [Gossypium raimondii]
Length = 529
Score = 105 bits (261), Expect = 2e-19
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ EA +LF+ K +G KPT+VTYN L+ L+++G+V +AQ +F EM + SP+ TY
Sbjct: 309 KMDEAFELFQ--KMHGIKPTIVTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYT 366
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
MLDGLCK+GH+EEA+ L+ + EST+ K +I+ +++I G + R + + F EI +
Sbjct: 367 VMLDGLCKHGHIEEALDLFHSLESTNKKPSIEHFSILIDGMW-RAGKSEEARKMFTEISE 425
Query: 1761 RGL----VPYTMIYSG 1726
+GL V Y ++ SG
Sbjct: 426 KGLSLDVVTYNIMLSG 441
Score = 80.5 bits (197), Expect = 6e-12
Identities = 42/128 (32%), Positives = 70/128 (54%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
EA+K+F + +NG P VVT+ L+ L ++G+ G AQ +F M P TY ++L
Sbjct: 207 EAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIRQGAKPDIRTYNSLL 266
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGL 1753
GLC NGHL+EA L+ ++ + ++N++I G+ + +WKM + F G+
Sbjct: 267 SGLCSNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCK---SWKMDEAFELFQKMHGI 323
Query: 1752 VPYTMIYS 1729
P + Y+
Sbjct: 324 KPTIVTYN 331
Score = 70.5 bits (171), Expect(2) = 9e-10
Identities = 34/127 (26%), Positives = 73/127 (57%)
Frame = -3
Query: 2109 AMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLD 1930
A++L + ++ + + T++T+++++ +DG V A ++F+EM S +SP V YG+++
Sbjct: 103 ALELHRKMENSSCQGTLLTFSMVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIH 162
Query: 1929 GLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGLV 1750
G C G L+EA+ ++ S + ++ +N +IHGF + V W F+ + + G+
Sbjct: 163 GFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFCQ-VGMWGEAVKIFNRMVENGIS 221
Query: 1749 PYTMIYS 1729
P + ++
Sbjct: 222 PDVVTFT 228
Score = 22.7 bits (47), Expect(2) = 9e-10
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 1673 RDGFLPDARTYGTIIQG 1623
R G PD RTY +++ G
Sbjct: 252 RQGAKPDIRTYNSLLSG 268
Score = 63.2 bits (152), Expect = 9e-07
Identities = 35/99 (35%), Positives = 53/99 (53%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
+ EA+ LF +L+ KP++ ++IL+ G++R G+ A+ +FTE+ LS VTY
Sbjct: 378 IEEALDLFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNI 437
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHG 1822
ML GLCK EA L E + + N +IHG
Sbjct: 438 MLSGLCKQSMSLEANKLLMEMEEKGCVPDSISFNTLIHG 476
Score = 62.4 bits (150), Expect = 2e-06
Identities = 36/131 (27%), Positives = 68/131 (51%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ +A+++F + + GF+ V Y IL+ GL G G A L +M++ + +T+
Sbjct: 64 KVLDAVQVFDKMCERGFQGDGVIYGILINGLCSIGHPGMALELHRKMENSSCQGTLLTFS 123
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
++D CK+G ++ A +++ S + + + +IHGF + K FDE+
Sbjct: 124 MVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIHGFC-GLGRLKEAVNVFDEMVS 182
Query: 1761 RGLVPYTMIYS 1729
RGL P ++Y+
Sbjct: 183 RGLTPDLIMYN 193
Score = 60.1 bits (144), Expect(2) = 2e-06
Identities = 32/94 (34%), Positives = 54/94 (57%)
Frame = -3
Query: 2100 LFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLDGLC 1921
+F + + GF+P +VT +ILL G+ DG+V A +F +M V YG +++GLC
Sbjct: 36 VFGEIIKRGFEPDLVTVSILLKGMCVDGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 95
Query: 1920 KNGHLEEAIALYKTAESTSVKANIDTHNVVIHGF 1819
GH A+ L++ E++S + + T ++VI F
Sbjct: 96 SIGHPGMALELHRKMENSSCQGTLLTFSMVIDAF 129
Score = 21.6 bits (44), Expect(2) = 2e-06
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 1727 GNGILFEANNEQSNLRNERDGFLPDARTYGTIIQGF 1620
G G L EA N + + G PD Y T+I GF
Sbjct: 166 GLGRLKEAVNVFDEMVSR--GLTPDLIMYNTLIHGF 199
>ref|XP_012481932.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like
isoform X1 [Gossypium raimondii]
Length = 607
Score = 105 bits (261), Expect = 2e-19
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ EA +LF+ K +G KPT+VTYN L+ L+++G+V +AQ +F EM + SP+ TY
Sbjct: 387 KMDEAFELFQ--KMHGIKPTIVTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYT 444
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
MLDGLCK+GH+EEA+ L+ + EST+ K +I+ +++I G + R + + F EI +
Sbjct: 445 VMLDGLCKHGHIEEALDLFHSLESTNKKPSIEHFSILIDGMW-RAGKSEEARKMFTEISE 503
Query: 1761 RGL----VPYTMIYSG 1726
+GL V Y ++ SG
Sbjct: 504 KGLSLDVVTYNIMLSG 519
Score = 80.5 bits (197), Expect = 6e-12
Identities = 42/128 (32%), Positives = 70/128 (54%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
EA+K+F + +NG P VVT+ L+ L ++G+ G AQ +F M P TY ++L
Sbjct: 285 EAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIRQGAKPDIRTYNSLL 344
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGL 1753
GLC NGHL+EA L+ ++ + ++N++I G+ + +WKM + F G+
Sbjct: 345 SGLCSNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCK---SWKMDEAFELFQKMHGI 401
Query: 1752 VPYTMIYS 1729
P + Y+
Sbjct: 402 KPTIVTYN 409
Score = 70.5 bits (171), Expect(2) = 9e-10
Identities = 34/127 (26%), Positives = 73/127 (57%)
Frame = -3
Query: 2109 AMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLD 1930
A++L + ++ + + T++T+++++ +DG V A ++F+EM S +SP V YG+++
Sbjct: 181 ALELHRKMENSSCQGTLLTFSMVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIH 240
Query: 1929 GLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGLV 1750
G C G L+EA+ ++ S + ++ +N +IHGF + V W F+ + + G+
Sbjct: 241 GFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFCQ-VGMWGEAVKIFNRMVENGIS 299
Query: 1749 PYTMIYS 1729
P + ++
Sbjct: 300 PDVVTFT 306
Score = 22.7 bits (47), Expect(2) = 9e-10
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 1673 RDGFLPDARTYGTIIQG 1623
R G PD RTY +++ G
Sbjct: 330 RQGAKPDIRTYNSLLSG 346
Score = 63.2 bits (152), Expect = 9e-07
Identities = 35/99 (35%), Positives = 53/99 (53%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
+ EA+ LF +L+ KP++ ++IL+ G++R G+ A+ +FTE+ LS VTY
Sbjct: 456 IEEALDLFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNI 515
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHG 1822
ML GLCK EA L E + + N +IHG
Sbjct: 516 MLSGLCKQSMSLEANKLLMEMEEKGCVPDSISFNTLIHG 554
Score = 62.4 bits (150), Expect = 2e-06
Identities = 36/131 (27%), Positives = 68/131 (51%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ +A+++F + + GF+ V Y IL+ GL G G A L +M++ + +T+
Sbjct: 142 KVLDAVQVFDKMCERGFQGDGVIYGILINGLCSIGHPGMALELHRKMENSSCQGTLLTFS 201
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
++D CK+G ++ A +++ S + + + +IHGF + K FDE+
Sbjct: 202 MVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIHGFC-GLGRLKEAVNVFDEMVS 260
Query: 1761 RGLVPYTMIYS 1729
RGL P ++Y+
Sbjct: 261 RGLTPDLIMYN 271
Score = 60.1 bits (144), Expect(2) = 2e-06
Identities = 32/94 (34%), Positives = 54/94 (57%)
Frame = -3
Query: 2100 LFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLDGLC 1921
+F + + GF+P +VT +ILL G+ DG+V A +F +M V YG +++GLC
Sbjct: 114 VFGEIIKRGFEPDLVTVSILLKGMCVDGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 173
Query: 1920 KNGHLEEAIALYKTAESTSVKANIDTHNVVIHGF 1819
GH A+ L++ E++S + + T ++VI F
Sbjct: 174 SIGHPGMALELHRKMENSSCQGTLLTFSMVIDAF 207
Score = 21.6 bits (44), Expect(2) = 2e-06
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 1727 GNGILFEANNEQSNLRNERDGFLPDARTYGTIIQGF 1620
G G L EA N + + G PD Y T+I GF
Sbjct: 244 GLGRLKEAVNVFDEMVSR--GLTPDLIMYNTLIHGF 277
>gb|KJB28422.1| hypothetical protein B456_005G047000 [Gossypium raimondii]
Length = 641
Score = 105 bits (261), Expect = 2e-19
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ EA +LF+ K +G KPT+VTYN L+ L+++G+V +AQ +F EM + SP+ TY
Sbjct: 421 KMDEAFELFQ--KMHGIKPTIVTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYT 478
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
MLDGLCK+GH+EEA+ L+ + EST+ K +I+ +++I G + R + + F EI +
Sbjct: 479 VMLDGLCKHGHIEEALDLFHSLESTNKKPSIEHFSILIDGMW-RAGKSEEARKMFTEISE 537
Query: 1761 RGL----VPYTMIYSG 1726
+GL V Y ++ SG
Sbjct: 538 KGLSLDVVTYNIMLSG 553
Score = 80.5 bits (197), Expect = 6e-12
Identities = 42/128 (32%), Positives = 70/128 (54%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
EA+K+F + +NG P VVT+ L+ L ++G+ G AQ +F M P TY ++L
Sbjct: 319 EAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIRQGAKPDIRTYNSLL 378
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGL 1753
GLC NGHL+EA L+ ++ + ++N++I G+ + +WKM + F G+
Sbjct: 379 SGLCSNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCK---SWKMDEAFELFQKMHGI 435
Query: 1752 VPYTMIYS 1729
P + Y+
Sbjct: 436 KPTIVTYN 443
Score = 70.5 bits (171), Expect(2) = 9e-10
Identities = 34/127 (26%), Positives = 73/127 (57%)
Frame = -3
Query: 2109 AMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLD 1930
A++L + ++ + + T++T+++++ +DG V A ++F+EM S +SP V YG+++
Sbjct: 215 ALELHRKMENSSCQGTLLTFSMVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIH 274
Query: 1929 GLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGLV 1750
G C G L+EA+ ++ S + ++ +N +IHGF + V W F+ + + G+
Sbjct: 275 GFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFCQ-VGMWGEAVKIFNRMVENGIS 333
Query: 1749 PYTMIYS 1729
P + ++
Sbjct: 334 PDVVTFT 340
Score = 22.7 bits (47), Expect(2) = 9e-10
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 1673 RDGFLPDARTYGTIIQG 1623
R G PD RTY +++ G
Sbjct: 364 RQGAKPDIRTYNSLLSG 380
Score = 63.2 bits (152), Expect = 9e-07
Identities = 35/99 (35%), Positives = 53/99 (53%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
+ EA+ LF +L+ KP++ ++IL+ G++R G+ A+ +FTE+ LS VTY
Sbjct: 490 IEEALDLFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNI 549
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHG 1822
ML GLCK EA L E + + N +IHG
Sbjct: 550 MLSGLCKQSMSLEANKLLMEMEEKGCVPDSISFNTLIHG 588
Score = 62.4 bits (150), Expect = 2e-06
Identities = 36/131 (27%), Positives = 68/131 (51%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ +A+++F + + GF+ V Y IL+ GL G G A L +M++ + +T+
Sbjct: 176 KVLDAVQVFDKMCERGFQGDGVIYGILINGLCSIGHPGMALELHRKMENSSCQGTLLTFS 235
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
++D CK+G ++ A +++ S + + + +IHGF + K FDE+
Sbjct: 236 MVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIHGFC-GLGRLKEAVNVFDEMVS 294
Query: 1761 RGLVPYTMIYS 1729
RGL P ++Y+
Sbjct: 295 RGLTPDLIMYN 305
Score = 60.1 bits (144), Expect(2) = 2e-06
Identities = 32/94 (34%), Positives = 54/94 (57%)
Frame = -3
Query: 2100 LFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLDGLC 1921
+F + + GF+P +VT +ILL G+ DG+V A +F +M V YG +++GLC
Sbjct: 148 VFGEIIKRGFEPDLVTVSILLKGMCVDGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 207
Query: 1920 KNGHLEEAIALYKTAESTSVKANIDTHNVVIHGF 1819
GH A+ L++ E++S + + T ++VI F
Sbjct: 208 SIGHPGMALELHRKMENSSCQGTLLTFSMVIDAF 241
Score = 21.6 bits (44), Expect(2) = 2e-06
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 1727 GNGILFEANNEQSNLRNERDGFLPDARTYGTIIQGF 1620
G G L EA N + + G PD Y T+I GF
Sbjct: 278 GLGRLKEAVNVFDEMVSR--GLTPDLIMYNTLIHGF 311
>ref|XP_012487249.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Gossypium raimondii]
gi|763771076|gb|KJB38291.1| hypothetical protein
B456_006G247100 [Gossypium raimondii]
Length = 638
Score = 97.8 bits (242), Expect(2) = 4e-19
Identities = 51/132 (38%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSF-CLSPSEVTY 1945
K+ E +LF++++ G KP TYN L+ L R GRV +A+ +F EM SP+ TY
Sbjct: 403 KIDEGFQLFRDMQFQGCKPNARTYNTLIQALCRVGRVRTAKKMFDEMYVCGSQSPTSFTY 462
Query: 1944 GTMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIP 1765
MLDGLCKNGH++EAIAL+++ E T +++I+ ++++I+G R + + F+E+
Sbjct: 463 TIMLDGLCKNGHVDEAIALFRSLEGTKYESSIELYSILIYGMC-RTGRMEEARNMFNEMS 521
Query: 1764 DRGLVPYTMIYS 1729
+G VP + Y+
Sbjct: 522 RKGFVPDVVTYN 533
Score = 26.9 bits (58), Expect(2) = 4e-19
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = -1
Query: 1721 GILFEANNEQSNLRNERDGFLPDARTYGTIIQGFLGAT*TTGHCNFFMTFMKENLYP 1551
G++ EAN + + E G LP++ ++ IIQGFL N + N P
Sbjct: 543 GMILEAN--KLIVEMEEKGCLPNSISFNIIIQGFLRENNIPEAMNLLKEMRRRNFAP 597
Score = 68.9 bits (167), Expect = 2e-08
Identities = 35/98 (35%), Positives = 55/98 (56%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
EA+ LF++L+ ++ ++ Y+IL+ G+ R GR+ A+ +F EM P VTY ++
Sbjct: 477 EAIALFRSLEGTKYESSIELYSILIYGMCRTGRMEEARNMFNEMSRKGFVPDVVTYNILI 536
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGF 1819
DGLCK G + EA L E N + N++I GF
Sbjct: 537 DGLCKKGMILEANKLIVEMEEKGCLPNSISFNIIIQGF 574
Score = 68.2 bits (165), Expect = 3e-08
Identities = 29/98 (29%), Positives = 58/98 (59%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
EA+++F + G P +T+ L++ L + G V A +F M+ + P+ TY +++
Sbjct: 301 EAIRIFDRMVGEGISPDEITFTTLISCLCKKGMVVKAHEMFAFMRQKEMKPTLFTYNSLM 360
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGF 1819
DGLC+ G L+EA L+++ + N+ ++N++I+G+
Sbjct: 361 DGLCRAGQLDEAAKLFRSIPDQGYEVNVISYNIMINGY 398
Score = 67.8 bits (164), Expect = 4e-08
Identities = 36/121 (29%), Positives = 60/121 (49%)
Frame = -3
Query: 2109 AMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLD 1930
A+ LF+ + + + + Y + LY+D V LF EM S ++P V Y +++
Sbjct: 197 ALNLFRKMAKRNCEGYLRIYGTTIGSLYKDKLVDEGLNLFFEMVSKGITPDVVVYSSLVS 256
Query: 1929 GLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGLV 1750
GLC G L+EA+ + + A++ +N++IHG F R WK FD + G+
Sbjct: 257 GLCSLGRLKEAVKFFDEMIGRGIAADLVMYNLLIHG-FSREGMWKEAIRIFDRMVGEGIS 315
Query: 1749 P 1747
P
Sbjct: 316 P 316
Score = 63.2 bits (152), Expect(2) = 1e-07
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
+L EA+K F + G +V YN+L+ G R+G A +F M +SP E+T+
Sbjct: 263 RLKEAVKFFDEMIGRGIAADLVMYNLLIHGFSREGMWKEAIRIFDRMVGEGISPDEITFT 322
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
T++ LCK G + +A ++ +K + T+N ++ G R F IPD
Sbjct: 323 TLISCLCKKGMVVKAHEMFAFMRQKEMKPTLFTYNSLMDGLC-RAGQLDEAAKLFRSIPD 381
Query: 1761 RG----LVPYTMIYSG 1726
+G ++ Y ++ +G
Sbjct: 382 QGYEVNVISYNIMING 397
Score = 22.7 bits (47), Expect(2) = 1e-07
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 1667 GFLPDARTYGTIIQ 1626
G P+ARTY T+IQ
Sbjct: 418 GCKPNARTYNTLIQ 431
Score = 63.2 bits (152), Expect = 9e-07
Identities = 34/115 (29%), Positives = 60/115 (52%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
+A ++F ++Q KPT+ TYN L+ GL R G++ A LF + + ++Y M+
Sbjct: 336 KAHEMFAFMRQKEMKPTLFTYNSLMDGLCRAGQLDEAAKLFRSIPDQGYEVNVISYNIMI 395
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEI 1768
+G CK+ ++E L++ + K N T+N +I RV + + FDE+
Sbjct: 396 NGYCKSQKIDEGFQLFRDMQFQGCKPNARTYNTLIQALC-RVGRVRTAKKMFDEM 449
>ref|XP_007035007.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508714036|gb|EOY05933.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 609
Score = 102 bits (254), Expect = 1e-18
Identities = 55/136 (40%), Positives = 81/136 (59%), Gaps = 4/136 (2%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ EA +LF+ + G KPT VTYN L+ L + RV +AQ +F EM + P TY
Sbjct: 385 KIDEAFQLFQKMHDKGIKPTTVTYNTLIGALCQARRVSTAQKMFNEMHVYGQFPILSTYT 444
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
MLDGLCKNGH+EEA+ L+ + EST K ++ +++I G + + + F EI +
Sbjct: 445 VMLDGLCKNGHIEEAMDLFHSLESTEYKPGVEFFSILIDGMC-KAGRLEEARKMFIEISE 503
Query: 1761 RGLVP----YTMIYSG 1726
+GLVP Y +++SG
Sbjct: 504 KGLVPDVVTYNIMFSG 519
Score = 76.6 bits (187), Expect = 8e-11
Identities = 40/132 (30%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
L EA K+F + + G P VVT+ IL+ L ++G++G AQ + M P TY +
Sbjct: 281 LEEATKIFNLMVRKGISPDVVTFTILIDCLCKEGKMGEAQGILDLMIQQGKEPDIRTYNS 340
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIF--FDEIP 1765
++ G C G L+EA L+ + + ++N++I+G+ + +WK+ + F F ++
Sbjct: 341 LISGFCSTGQLDEATKLFGLIADQGLDLDAFSYNIMINGYCK---SWKIDEAFQLFQKMH 397
Query: 1764 DRGLVPYTMIYS 1729
D+G+ P T+ Y+
Sbjct: 398 DKGIKPTTVTYN 409
Score = 73.9 bits (180), Expect = 5e-10
Identities = 33/96 (34%), Positives = 62/96 (64%)
Frame = -3
Query: 2106 MKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLDG 1927
++L + ++++ ++ T+VTY++++ +DG V A LF EM S ++P V YG+++DG
Sbjct: 180 LELHRKMEESNYEGTLVTYSMIIDAFCKDGMVDEAVGLFLEMVSKGITPDVVVYGSLIDG 239
Query: 1926 LCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGF 1819
LC+ G L+EA+ + S + A++ +N +IHGF
Sbjct: 240 LCRLGRLKEAVNFFDEMVSGGLTADLVMYNSLIHGF 275
Score = 65.5 bits (158), Expect = 2e-07
Identities = 35/99 (35%), Positives = 53/99 (53%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
+ EAM LF +L+ +KP V ++IL+ G+ + GR+ A+ +F E+ L P VTY
Sbjct: 456 IEEAMDLFHSLESTEYKPGVEFFSILIDGMCKAGRLEEARKMFIEISEKGLVPDVVTYNI 515
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHG 1822
M GLC+ G EA L E + + N++IHG
Sbjct: 516 MFSGLCRKGMSLEADKLLTEMEEKGCLPDSISFNIIIHG 554
>ref|XP_007035008.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508714037|gb|EOY05934.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 644
Score = 100 bits (249), Expect(2) = 2e-18
Identities = 53/131 (40%), Positives = 81/131 (61%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ EA +LF+ + G KP VT+N L+ L + GR+ +A+ ++ EM + SP TY
Sbjct: 415 KIDEAFQLFQEMHFQGCKPNAVTFNTLIGALCQAGRLRTAEKMYHEMHACGQSPIFSTYV 474
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
MLDGLCKNGH++EAIAL+ + ST K++I+ +++I G R + F+EIP
Sbjct: 475 VMLDGLCKNGHIDEAIALFHSLGSTKYKSSIELCSILIDGMC-RTGRLEEAMNMFNEIPK 533
Query: 1761 RGLVPYTMIYS 1729
+GLVP + Y+
Sbjct: 534 KGLVPDVVTYN 544
Score = 22.3 bits (46), Expect(2) = 2e-18
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 1721 GILFEANNEQSNLRNERDGFLPDARTYGTIIQGFL 1617
G+L EA+ ++ E G LP++ ++ IIQG L
Sbjct: 554 GMLLEADKLLIDM--EEKGCLPNSISFNIIIQGCL 586
Score = 72.8 bits (177), Expect = 1e-09
Identities = 37/134 (27%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Frame = -3
Query: 2121 KLHE---AMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEV 1951
K+HE A+KL++ + + T+V Y++++ L +D V +F EM S ++P V
Sbjct: 202 KIHETNFALKLYRKMAERNCGGTLVIYSMIIDSLCKDRLVDEGVNMFFEMVSKGINPDVV 261
Query: 1950 TYGTMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDE 1771
Y +++ GLC G L+EA+ + + A++ +N +IHG+ + V WK F+
Sbjct: 262 VYSSLISGLCSLGRLKEAVKFFDEMVGRGIAADLVMYNSLIHGYCQ-VGMWKEAMRIFNR 320
Query: 1770 IPDRGLVPYTMIYS 1729
+ + G+ P + ++
Sbjct: 321 MVEEGIFPDVVTFT 334
Score = 71.6 bits (174), Expect = 3e-09
Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
EAM++F + + G P VVT+ L+ L ++G+VG A +F M+ P+ TY +++
Sbjct: 313 EAMRIFNRMVEEGIFPDVVTFTTLIDCLCKEGKVGEAHKIFVLMRQQGKEPNLFTYNSLM 372
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIF--FDEIPDR 1759
GLC G L+EA L+ V+ N ++N++I+G+ + + K+ + F F E+ +
Sbjct: 373 SGLCMVGQLDEAAKLFGMLADQGVEPNAFSYNIMINGYCK---SRKIDEAFQLFQEMHFQ 429
Query: 1758 GLVPYTMIYS 1729
G P + ++
Sbjct: 430 GCKPNAVTFN 439
Score = 62.8 bits (151), Expect = 1e-06
Identities = 35/99 (35%), Positives = 52/99 (52%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
+ EA+ LF +L +K ++ +IL+ G+ R GR+ A +F E+ L P VTY
Sbjct: 486 IDEAIALFHSLGSTKYKSSIELCSILIDGMCRTGRLEEAMNMFNEIPKKGLVPDVVTYNI 545
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHG 1822
M++GLCK G L EA L E N + N++I G
Sbjct: 546 MINGLCKKGMLLEADKLLIDMEEKGCLPNSISFNIIIQG 584
Score = 62.4 bits (150), Expect = 2e-06
Identities = 32/98 (32%), Positives = 54/98 (55%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ EA K+F ++Q G +P + TYN L++GL G++ A LF + + P+ +Y
Sbjct: 345 KVGEAHKIFVLMRQQGKEPNLFTYNSLMSGLCMVGQLDEAAKLFGMLADQGVEPNAFSYN 404
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVI 1828
M++G CK+ ++EA L++ K N T N +I
Sbjct: 405 IMINGYCKSRKIDEAFQLFQEMHFQGCKPNAVTFNTLI 442
>ref|XP_010529887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like
[Tarenaya hassleriana]
Length = 635
Score = 95.9 bits (237), Expect(2) = 2e-18
Identities = 47/131 (35%), Positives = 76/131 (58%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
++ E + LF + + G TYNIL+ G YR G + +AQ LF EM P+ VTY
Sbjct: 416 RVKEGINLFNEMSRRGLDVDSFTYNILIQGFYRVGNLDAAQKLFREMHYKDHHPNLVTYS 475
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
+LDGLCKNG +EA+ LY + + + +I +HN+++HG +V + +FFD + +
Sbjct: 476 ILLDGLCKNGKTDEALGLYNKLQKSGIDLHISSHNIMMHGLC-KVGSVDEAFVFFDRLLE 534
Query: 1761 RGLVPYTMIYS 1729
+G+ P + Y+
Sbjct: 535 KGVRPDVITYN 545
Score = 26.9 bits (58), Expect(2) = 2e-18
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 1727 GNGILFEANNEQSNLRNERDGFLPDARTYGTIIQGFL 1617
G G L+E ++ DG PDA TY +I+G L
Sbjct: 553 GKGSLYEVEKIIGKMKE--DGCFPDAGTYNALIRGRL 587
Score = 70.1 bits (170), Expect = 8e-09
Identities = 39/128 (30%), Positives = 66/128 (51%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
EA +L++ + Q G P +TY L+ G R+G A+ +F M + P+ VT+ +M+
Sbjct: 349 EAEELYEEMIQRGLVPNTITYTSLINGFCLQNRLGEAKQIFNYMITKGCFPNTVTFNSMI 408
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGL 1753
+G CK ++E I L+ + + T+N++I GF+ RV N Q F E+ +
Sbjct: 409 NGYCKANRVKEGINLFNEMSRRGLDVDSFTYNILIQGFY-RVGNLDAAQKLFREMHYKDH 467
Query: 1752 VPYTMIYS 1729
P + YS
Sbjct: 468 HPNLVTYS 475
Score = 62.8 bits (151), Expect = 1e-06
Identities = 37/138 (26%), Positives = 72/138 (52%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
L A KLF+ + P +VTY+ILL GL ++G+ A L+ +++ + ++
Sbjct: 452 LDAAQKLFREMHYKDHHPNLVTYSILLDGLCKNGKTDEALGLYNKLQKSGIDLHISSHNI 511
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDR 1759
M+ GLCK G ++EA + V+ ++ T+N++I G + + +++++I ++ +
Sbjct: 512 MMHGLCKVGSVDEAFVFFDRLLEKGVRPDVITYNIMISGLCGKGSLYEVEKI-IGKMKED 570
Query: 1758 GLVPYTMIYSGQWNFIRG 1705
G P Y+ IRG
Sbjct: 571 GCFPDAGTYNA---LIRG 585
Score = 57.8 bits (138), Expect(2) = 5e-06
Identities = 38/134 (28%), Positives = 66/134 (49%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
+ +A+ LF+ + + G P VV Y L+ R GR L +EM ++P+ VT+
Sbjct: 277 MDDALNLFEVMDKVGIVPDVVIYTSLINNFSRFGRWDDVARLLSEMVKRKITPNVVTFNG 336
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDR 1759
++D L K G EA LY+ + N T+ +I+GF + + +QI F+ + +
Sbjct: 337 LIDALLKEGRFLEAEELYEEMIQRGLVPNTITYTSLINGFCLQNRLGEAKQI-FNYMITK 395
Query: 1758 GLVPYTMIYSGQWN 1717
G P T+ ++ N
Sbjct: 396 GCFPNTVTFNSMIN 409
Score = 22.7 bits (47), Expect(2) = 5e-06
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -1
Query: 1697 EQSNLRNE--RDGFLPDARTYGTIIQGF 1620
E NL NE R G D+ TY +IQGF
Sbjct: 419 EGINLFNEMSRRGLDVDSFTYNILIQGF 446
>ref|XP_012831521.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Erythranthe guttatus]
gi|604348335|gb|EYU46490.1| hypothetical protein
MIMGU_mgv11b018784mg [Erythranthe guttata]
Length = 612
Score = 96.3 bits (238), Expect(2) = 3e-18
Identities = 54/139 (38%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
EAM LFK + N +KPTV+T+N LL GL++ G+V AQ L++ +K + L+P TY +L
Sbjct: 384 EAMSLFKEMLCNKYKPTVITFNTLLTGLFQKGKVKDAQELYSSIKDYDLTPDSATYSILL 443
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGL 1753
DG CKN LEEAI ++T E + K N T N ++ G + + F + L
Sbjct: 444 DGFCKNDCLEEAIEFFQTLEKSGYKPNSLTCNCLLDGLC-KAGKLDLASELFGRFSEMEL 502
Query: 1752 VPYTMIYSGQWN-FIRG*Q 1699
P YS N F +G Q
Sbjct: 503 APSAYTYSIMINGFCKGGQ 521
Score = 25.8 bits (55), Expect(2) = 3e-18
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 1721 GILFEANNEQSNLRNERDGFLPDARTYGTIIQGF 1620
G L +ANN L E+ G PD T+ T+++GF
Sbjct: 520 GQLEKANN--LFLEMEKKGCAPDVATFNTLMRGF 551
Score = 74.7 bits (182), Expect = 3e-10
Identities = 37/100 (37%), Positives = 57/100 (57%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
L EA++ F+ L+++G+KP +T N LL GL + G++ A LF L+PS TY
Sbjct: 452 LEEAIEFFQTLEKSGYKPNSLTCNCLLDGLCKAGKLDLASELFGRFSEMELAPSAYTYSI 511
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGF 1819
M++G CK G LE+A L+ E ++ T N ++ GF
Sbjct: 512 MINGFCKGGQLEKANNLFLEMEKKGCAPDVATFNTLMRGF 551
Score = 70.1 bits (170), Expect = 8e-09
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLS------P 1960
KL +A+ L + + GF+P V T+ L+ GL R G A L EM++ + P
Sbjct: 165 KLGDALSLLRKIIGFGFRPNVKTWGTLVNGLCRSGNAKVALRLHEEMRNGTVGFDLKFDP 224
Query: 1959 SEVTYGTMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIF 1780
+ + Y ++DGLCK G +E+ L+ E + A++ + +I+G R+ +W+ +
Sbjct: 225 NLIYYSCLIDGLCKEGLVEKGKELFLEMEGRGISADVVAYGALINGLC-RIGDWERGRDL 283
Query: 1779 FDEIPDRGLVPYTMIYS 1729
F ++ DRG+ P + ++
Sbjct: 284 FFQMMDRGIRPNVVTFN 300
Score = 64.3 bits (155), Expect = 4e-07
Identities = 38/131 (29%), Positives = 62/131 (47%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K EA L + + G KP + +N L+ G + R+G A+ LF M+ +Y
Sbjct: 311 KTDEASGLLDFMIRRGEKPDSIIFNTLIDGYCLERRIGDARKLFVSMRDEGHERDVASYN 370
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
+++G CK G +EA++L+K K + T N ++ G F++ K Q + I D
Sbjct: 371 VLINGYCKCGRSDEAMSLFKEMLCNKYKPTVITFNTLLTGLFQK-GKVKDAQELYSSIKD 429
Query: 1761 RGLVPYTMIYS 1729
L P + YS
Sbjct: 430 YDLTPDSATYS 440
>ref|XP_010541012.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like
isoform X1 [Tarenaya hassleriana]
gi|729343735|ref|XP_010541013.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g63330-like isoform X2 [Tarenaya hassleriana]
gi|729343738|ref|XP_010541014.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Tarenaya hassleriana]
Length = 674
Score = 100 bits (249), Expect = 5e-18
Identities = 50/131 (38%), Positives = 76/131 (58%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
++ E M LF + + G +TYNIL+ G YR G++ +AQ LF EM+ P VTY
Sbjct: 455 RVGEGMNLFYEMSRRGLVADTITYNILIQGFYRVGKLDAAQKLFLEMQCKGHHPDLVTYS 514
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
+LDGLCKNG E+A+ LY E + ++ I +HNV++HG +V I F+ + D
Sbjct: 515 ILLDGLCKNGKTEKALGLYNDLEKSGIELRISSHNVIMHGLC-KVGRVDEALILFNRLLD 573
Query: 1761 RGLVPYTMIYS 1729
+G+ P + Y+
Sbjct: 574 KGVKPDVITYN 584
Score = 69.7 bits (169), Expect = 1e-08
Identities = 41/131 (31%), Positives = 69/131 (52%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
++ +A+ LF + G P VVTY L+ GL + GR L +EM ++P+ VT+
Sbjct: 350 RIDDALNLFGKMGDVGIVPNVVTYTSLINGLSKFGRWDDVARLLSEMVEMKINPNVVTFS 409
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
++D LCK G EA L + + + N T+N +I+G+ + + +F+ E+
Sbjct: 410 VLIDALCKEGKFLEAEELCEEMIQSGLVPNTFTYNSMINGYCKANRVGEGMNLFY-EMSR 468
Query: 1761 RGLVPYTMIYS 1729
RGLV T+ Y+
Sbjct: 469 RGLVADTITYN 479
Score = 63.5 bits (153), Expect = 7e-07
Identities = 37/128 (28%), Positives = 65/128 (50%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
+ +L + + P VVT+++L+ L ++G+ A+ L EM L P+ TY +M+
Sbjct: 388 DVARLLSEMVEMKINPNVVTFSVLIDALCKEGKFLEAEELCEEMIQSGLVPNTFTYNSMI 447
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGL 1753
+G CK + E + L+ + A+ T+N++I GF+ RV Q F E+ +G
Sbjct: 448 NGYCKANRVGEGMNLFYEMSRRGLVADTITYNILIQGFY-RVGKLDAAQKLFLEMQCKGH 506
Query: 1752 VPYTMIYS 1729
P + YS
Sbjct: 507 HPDLVTYS 514
Score = 60.5 bits (145), Expect = 6e-06
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMK-SFCLSPSEVTY 1945
K+ A+ L + + G++P VVT+ L+ G + R+ A +L EM + P VTY
Sbjct: 244 KISAALSLVDQMVKEGYEPNVVTFTTLINGFCLESRISEALSLLDEMMLTMDCQPDVVTY 303
Query: 1944 GTMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIH-----GFFERVANWKMQQIF 1780
+++G+CK G + A+ L E ++ N+ ++++I G + N
Sbjct: 304 AVVINGVCKLGDYDLALTLLMKMEEMRIEVNVIIYSMIIDCLCKAGRIDDALN------L 357
Query: 1779 FDEIPDRGLVPYTMIYSGQWN 1717
F ++ D G+VP + Y+ N
Sbjct: 358 FGKMGDVGIVPNVVTYTSLIN 378
>ref|XP_009611078.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Nicotiana tomentosiformis]
gi|575488701|gb|AHG94965.1| mitochondrial PPR protein
[Nicotiana tomentosiformis]
Length = 591
Score = 90.5 bits (223), Expect(2) = 6e-18
Identities = 55/137 (40%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
KL EAM+LF + Q G KP V T+ +L GL+ GR+GSA+ F EM S P TYG
Sbjct: 367 KLAEAMQLFHEISQKGSKPNVFTHTTILQGLFDVGRIGSAKKFFDEMLSTGPIPDLYTYG 426
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQ--IFFDEI 1768
T+L+G K G + EAI+L+ E A+I+ +NVVI+G + N K+ + F+++
Sbjct: 427 TLLNGYFKYGLVAEAISLFNELERKREDADIEFYNVVINGLCK---NGKLDKALTIFEKL 483
Query: 1767 PDRGLVPYTMIYSGQWN 1717
GLVP Y+ N
Sbjct: 484 SSIGLVPNVRTYTTMIN 500
Score = 30.4 bits (67), Expect(2) = 6e-18
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = -1
Query: 1721 GILFEANNEQSNLRNERDGFLPDARTYGTIIQGFLGAT*TTGHCNFFMTFMKE 1563
G+L EA + + + E +G LP+ TY I+QGFL + + TFMKE
Sbjct: 506 GLLDEAKDMRRKM--EGNGCLPNNVTYNVIVQGFLRCS----RISEMRTFMKE 552
Score = 77.0 bits (188), Expect = 6e-11
Identities = 42/131 (32%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Frame = -3
Query: 2109 AMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLD 1930
A+KL +KQ G P +VTY+ L+ GL + G+ +TLF+EM + + P+ + ++D
Sbjct: 231 AIKLLNEMKQKGIPPNIVTYSSLIDGLCKLGQWEKVKTLFSEMVNLNIYPNVRIFTVVID 290
Query: 1929 GLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIF---FDEIPDR 1759
GLCK G +++A + K V+ +I T+NV++ G+ R + ++IF DE +
Sbjct: 291 GLCKEGRVDDAEEVMKHMVGKGVEPDIFTYNVIMDGYCLRGQVDRARRIFDFMIDENIEP 350
Query: 1758 GLVPYTMIYSG 1726
G + Y+++ +G
Sbjct: 351 GSISYSILING 361
Score = 71.2 bits (173), Expect(2) = 3e-10
Identities = 36/130 (27%), Positives = 66/130 (50%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
++ +A ++ K++ G +P + TYN+++ G G+V A+ +F M + P ++Y
Sbjct: 297 RVDDAEEVMKHMVGKGVEPDIFTYNVIMDGYCLRGQVDRARRIFDFMIDENIEPGSISYS 356
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
+++G CK L EA+ L+ K N+ TH ++ G F+ V + FFDE+
Sbjct: 357 ILINGYCKKKKLAEAMQLFHEISQKGSKPNVFTHTTILQGLFD-VGRIGSAKKFFDEMLS 415
Query: 1761 RGLVPYTMIY 1732
G +P Y
Sbjct: 416 TGPIPDLYTY 425
Score = 23.9 bits (50), Expect(2) = 3e-10
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 1667 GFLPDARTYGTIIQGF 1620
G +PD TYGT++ G+
Sbjct: 417 GPIPDLYTYGTLLNGY 432
Score = 69.7 bits (169), Expect = 1e-08
Identities = 38/119 (31%), Positives = 64/119 (53%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
EA+ LF L++ + YN+++ GL ++G++ A T+F ++ S L P+ TY TM+
Sbjct: 440 EAISLFNELERKREDADIEFYNVVINGLCKNGKLDKALTIFEKLSSIGLVPNVRTYTTMI 499
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRG 1756
+G C G L+EA + + E N T+NV++ GF R + + F E+ RG
Sbjct: 500 NGFCLKGLLDEAKDMRRKMEGNGCLPNNVTYNVIVQGFL-RCSRISEMRTFMKEMAGRG 557
Score = 63.2 bits (152), Expect = 9e-07
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Frame = -3
Query: 2082 QNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEM--KSFCLSPSEVTYGTMLDGLCKNGH 1909
+NG VVT+N LL GL+ + +V A LF ++ ++ C P EV Y T+++GL K GH
Sbjct: 134 KNGIPFNVVTFNTLLRGLFSENKVKDAIELFKKLVRENIC-EPDEVMYATVINGLSKMGH 192
Query: 1908 LEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGLVPYTMIYS 1729
E+ ++L + E + K +I +++VI + N +E+ +G+ P + YS
Sbjct: 193 TEKTLSLLRLMEQGNTKPDIWIYSIVIDALC-KDRNSDAAIKLLNEMKQKGIPPNIVTYS 251
Query: 1728 ---------GQWNFIR 1708
GQW ++
Sbjct: 252 SLIDGLCKLGQWEKVK 267
>ref|XP_010539050.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X1 [Tarenaya hassleriana]
Length = 537
Score = 96.3 bits (238), Expect(2) = 1e-17
Identities = 49/131 (37%), Positives = 78/131 (59%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
++ E + LF + + G VVTYNIL+ G YR G +G+AQ +F EM+ SP VTY
Sbjct: 318 RVDEGINLFYEMSRRGLVADVVTYNILIQGFYRVGNLGAAQKVFMEMQYKGHSPDLVTYI 377
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
+LDGLCKNG ++A+ LY + + + +I H+ ++HG +V I F+++ D
Sbjct: 378 ILLDGLCKNGKTDKALCLYNKLDKSGIDLHIPLHSCMMHGLC-KVGRVDEALILFNKLLD 436
Query: 1761 RGLVPYTMIYS 1729
RG+ P ++Y+
Sbjct: 437 RGVKPNVIMYN 447
Score = 23.9 bits (50), Expect(2) = 1e-17
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 1727 GNGILFEANNEQSNLRNERDGFLPDARTYGTIIQGFL 1617
G L+EA ++ DG PDA Y +I+G L
Sbjct: 455 GKDSLYEAEKVIGKMKE--DGCFPDAGMYNALIRGRL 489
Score = 68.2 bits (165), Expect(2) = 6e-09
Identities = 38/131 (29%), Positives = 70/131 (53%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ A+ L + + G+KP VVT++ L+ GL +GRV A +LF +M P+ VT+G
Sbjct: 178 KISAALSLVDQMVEEGYKPNVVTFSTLINGLCLEGRVSEALSLFDQMLKMDCQPNVVTFG 237
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
+++G+CK A+ L + E ++ NI +N +I + +V + F ++
Sbjct: 238 ILINGICKARDYALAMNLLEKMEEMYIEINIVIYNTII-DYLCKVGHVDGALNLFGKMGS 296
Query: 1761 RGLVPYTMIYS 1729
G+VP + ++
Sbjct: 297 CGIVPDVVTFN 307
Score = 22.3 bits (46), Expect(2) = 6e-09
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 1673 RDGFLPDARTYGTIIQGF 1620
R G + D TY +IQGF
Sbjct: 331 RRGLVADVVTYNILIQGF 348
Score = 65.9 bits (159), Expect = 1e-07
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Frame = -3
Query: 2109 AMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLD 1930
AM L + +++ + +V YN ++ L + G V A LF +M S + P VT+ ++++
Sbjct: 252 AMNLLEKMEEMYIEINIVIYNTIIDYLCKVGHVDGALNLFGKMGSCGIVPDVVTFNSIIN 311
Query: 1929 GLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRG-- 1756
G CK ++E I L+ + A++ T+N++I GF+ RV N Q F E+ +G
Sbjct: 312 GYCKANRVDEGINLFYEMSRRGLVADVVTYNILIQGFY-RVGNLGAAQKVFMEMQYKGHS 370
Query: 1755 --LVPYTMIYSG 1726
LV Y ++ G
Sbjct: 371 PDLVTYIILLDG 382
Score = 60.1 bits (144), Expect = 8e-06
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = -3
Query: 2076 GFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLDGLCKNGHLEEA 1897
G+KP VVTY L G G++ +A +L +M P+ VT+ T+++GLC G + EA
Sbjct: 158 GYKPNVVTYTTLAHGFCIHGKISAALSLVDQMVEEGYKPNVVTFSTLINGLCLEGRVSEA 217
Query: 1896 IALYKTAESTSVKANIDTHNVVIHG 1822
++L+ + N+ T ++I+G
Sbjct: 218 LSLFDQMLKMDCQPNVVTFGILING 242
>ref|XP_010539051.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X2 [Tarenaya hassleriana]
Length = 532
Score = 96.3 bits (238), Expect(2) = 1e-17
Identities = 49/131 (37%), Positives = 78/131 (59%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
++ E + LF + + G VVTYNIL+ G YR G +G+AQ +F EM+ SP VTY
Sbjct: 313 RVDEGINLFYEMSRRGLVADVVTYNILIQGFYRVGNLGAAQKVFMEMQYKGHSPDLVTYI 372
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
+LDGLCKNG ++A+ LY + + + +I H+ ++HG +V I F+++ D
Sbjct: 373 ILLDGLCKNGKTDKALCLYNKLDKSGIDLHIPLHSCMMHGLC-KVGRVDEALILFNKLLD 431
Query: 1761 RGLVPYTMIYS 1729
RG+ P ++Y+
Sbjct: 432 RGVKPNVIMYN 442
Score = 23.9 bits (50), Expect(2) = 1e-17
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 1727 GNGILFEANNEQSNLRNERDGFLPDARTYGTIIQGFL 1617
G L+EA ++ DG PDA Y +I+G L
Sbjct: 450 GKDSLYEAEKVIGKMKE--DGCFPDAGMYNALIRGRL 484
Score = 68.2 bits (165), Expect(2) = 6e-09
Identities = 38/131 (29%), Positives = 70/131 (53%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ A+ L + + G+KP VVT++ L+ GL +GRV A +LF +M P+ VT+G
Sbjct: 173 KISAALSLVDQMVEEGYKPNVVTFSTLINGLCLEGRVSEALSLFDQMLKMDCQPNVVTFG 232
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
+++G+CK A+ L + E ++ NI +N +I + +V + F ++
Sbjct: 233 ILINGICKARDYALAMNLLEKMEEMYIEINIVIYNTII-DYLCKVGHVDGALNLFGKMGS 291
Query: 1761 RGLVPYTMIYS 1729
G+VP + ++
Sbjct: 292 CGIVPDVVTFN 302
Score = 22.3 bits (46), Expect(2) = 6e-09
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 1673 RDGFLPDARTYGTIIQGF 1620
R G + D TY +IQGF
Sbjct: 326 RRGLVADVVTYNILIQGF 343
Score = 65.9 bits (159), Expect = 1e-07
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Frame = -3
Query: 2109 AMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLD 1930
AM L + +++ + +V YN ++ L + G V A LF +M S + P VT+ ++++
Sbjct: 247 AMNLLEKMEEMYIEINIVIYNTIIDYLCKVGHVDGALNLFGKMGSCGIVPDVVTFNSIIN 306
Query: 1929 GLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRG-- 1756
G CK ++E I L+ + A++ T+N++I GF+ RV N Q F E+ +G
Sbjct: 307 GYCKANRVDEGINLFYEMSRRGLVADVVTYNILIQGFY-RVGNLGAAQKVFMEMQYKGHS 365
Query: 1755 --LVPYTMIYSG 1726
LV Y ++ G
Sbjct: 366 PDLVTYIILLDG 377
Score = 60.1 bits (144), Expect = 8e-06
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = -3
Query: 2076 GFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLDGLCKNGHLEEA 1897
G+KP VVTY L G G++ +A +L +M P+ VT+ T+++GLC G + EA
Sbjct: 153 GYKPNVVTYTTLAHGFCIHGKISAALSLVDQMVEEGYKPNVVTFSTLINGLCLEGRVSEA 212
Query: 1896 IALYKTAESTSVKANIDTHNVVIHG 1822
++L+ + N+ T ++I+G
Sbjct: 213 LSLFDQMLKMDCQPNVVTFGILING 237
>pdb|4OZS|A Chain A, Rna Binding Protein
Length = 175
Score = 99.4 bits (246), Expect = 1e-17
Identities = 52/131 (39%), Positives = 81/131 (61%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
+L EA++LF+ +K+ G KP VVTYN L+ GL + GR+ A LF EMK + P VTY
Sbjct: 17 RLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYN 76
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
T++DGL K G LEEA+ L++ + VK ++ T+N +I G + + Q+ F E+ +
Sbjct: 77 TLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQL-FQEMKE 135
Query: 1761 RGLVPYTMIYS 1729
+G+ P + Y+
Sbjct: 136 KGVKPDVVTYN 146
Score = 97.4 bits (241), Expect = 4e-17
Identities = 51/125 (40%), Positives = 78/125 (62%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
+L EA++LF+ +K+ G KP VVTYN L+ GL + GR+ A LF EMK + P VTY
Sbjct: 52 RLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYN 111
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
T++DGL K G LEEA+ L++ + VK ++ T+N +I G + + Q+ F E+ +
Sbjct: 112 TLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQL-FQEMKE 170
Query: 1761 RGLVP 1747
+G+ P
Sbjct: 171 KGVKP 175
Score = 78.6 bits (192), Expect(2) = 1e-11
Identities = 43/111 (38%), Positives = 66/111 (59%)
Frame = -3
Query: 2061 VVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLDGLCKNGHLEEAIALYK 1882
VVTYN L+ GL + GR+ A LF EMK + P VTY T++DGL K G LEEA+ L++
Sbjct: 2 VVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQ 61
Query: 1881 TAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGLVPYTMIYS 1729
+ VK ++ T+N +I G + + Q+ F E+ ++G+ P + Y+
Sbjct: 62 EMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQL-FQEMKEKGVKPDVVTYN 111
Score = 21.2 bits (43), Expect(2) = 1e-11
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -1
Query: 1667 GFLPDARTYGTIIQGFLGA 1611
G PD TY T+I G A
Sbjct: 137 GVKPDVVTYNTLIDGLAKA 155
>ref|XP_011032518.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Populus euphratica]
gi|743866630|ref|XP_011032519.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g12700,
mitochondrial [Populus euphratica]
gi|743866634|ref|XP_011032520.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g12700,
mitochondrial [Populus euphratica]
gi|743866638|ref|XP_011032521.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g12700,
mitochondrial [Populus euphratica]
gi|743866642|ref|XP_011032522.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g12700,
mitochondrial [Populus euphratica]
Length = 689
Score = 99.4 bits (246), Expect = 1e-17
Identities = 55/132 (41%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
+L+EA +LFK ++QNG KP VVTYNI++ LY+D V A +EM + P VTY
Sbjct: 284 QLNEATRLFKRMEQNGCKPDVVTYNIIINSLYKDSLVNDAADFLSEMVDQGIPPDVVTYT 343
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFF-ERVANWKMQQIFFDEIP 1765
T+L GLC G L EAI L+K E K ++ +N +I +R+ N M+ F E+
Sbjct: 344 TILHGLCCLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAME--FLSEMV 401
Query: 1764 DRGLVPYTMIYS 1729
DRG+ P + YS
Sbjct: 402 DRGIPPNAVTYS 413
Score = 82.0 bits (201), Expect = 2e-12
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Frame = -3
Query: 2109 AMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLD 1930
A+ +FK ++QNG KP VVTYN ++ L +D V A +EM + P +TY +++
Sbjct: 218 AVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVH 277
Query: 1929 GLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFF-ERVANWKMQQIFFDEIPDRGL 1753
GLC G L EA L+K E K ++ T+N++I+ + + + N F E+ D+G+
Sbjct: 278 GLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIINSLYKDSLVNDAAD--FLSEMVDQGI 335
Query: 1752 VPYTMIYS 1729
P + Y+
Sbjct: 336 PPDVVTYT 343
Score = 81.3 bits (199), Expect = 3e-12
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
+L+EA++LFK ++Q G KP VV YN ++ L +D V A +EM + P+ VTY
Sbjct: 354 QLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYS 413
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFER----VANWKMQQIFFD 1774
TML G C G L+EA L+K +V N T +++ G + A W F+
Sbjct: 414 TMLHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFTILVDGLCQEGMVSEARW-----VFE 468
Query: 1773 EIPDRGLVPYTMIYSGQWN 1717
+ ++G+ P Y+ N
Sbjct: 469 TMTEKGVEPNIYTYNALMN 487
Score = 74.7 bits (182), Expect = 3e-10
Identities = 36/102 (35%), Positives = 61/102 (59%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
++ +A L + P VTYN ++ GL GR+ AQ LF +M S + P+ +TY
Sbjct: 529 RMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQDLFKKMCSSGMLPTLMTYS 588
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFF 1816
+L+GLCK+GHL+EA+ L+K+ + ++ +I + ++I G F
Sbjct: 589 ILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMF 630
Score = 68.6 bits (166), Expect(2) = 3e-09
Identities = 36/128 (28%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Frame = -3
Query: 2109 AMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLD 1930
A+ ++ + + G +P V+T+ L+ G+ +G++ A L+ EM P ++Y T+++
Sbjct: 148 AVSVWGKMFKLGIQPDVITFTTLINGVCDEGKIKVAVELYNEMVRSGHEPDVISYNTLIN 207
Query: 1929 GLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFF-ERVANWKMQQIFFDEIPDRGL 1753
GLC +G+ A+ ++K E K N+ T+N +I +R+ N M F E+ RG+
Sbjct: 208 GLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMD--FLSEMVGRGI 265
Query: 1752 VPYTMIYS 1729
P + Y+
Sbjct: 266 PPDAITYN 273
Score = 23.1 bits (48), Expect(2) = 3e-09
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -1
Query: 1700 NEQSNL--RNERDGFLPDARTYGTIIQGFLGAT*TTGHCNFFMTFMKENLYPGIL 1542
NE + L R E++G PD TY II + +F + + + P ++
Sbjct: 286 NEATRLFKRMEQNGCKPDVVTYNIIINSLYKDSLVNDAADFLSEMVDQGIPPDVV 340
Score = 70.1 bits (170), Expect = 8e-09
Identities = 36/100 (36%), Positives = 61/100 (61%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K++EA K+F+N+ G P V +YNIL+ G R+ A+ L T+M L+P+ VTY
Sbjct: 494 KMNEARKVFENMVGKGCAPDVHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYN 553
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHG 1822
T++ GLC G L +A L+K S+ + + T++++++G
Sbjct: 554 TIMKGLCYVGRLLDAQDLFKKMCSSGMLPTLMTYSILLNG 593
Score = 69.3 bits (168), Expect = 1e-08
Identities = 37/114 (32%), Positives = 62/114 (54%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
+L +A LFK + +G PT++TY+ILL GL + G + A LF MK L P + Y
Sbjct: 564 RLLDAQDLFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYT 623
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIF 1780
+++G+ G LE A L+ + ++ T+NV+I GF + + + ++F
Sbjct: 624 ILIEGMFIGGKLEVAKGLFSKLSANGIRPPERTYNVMIKGFLKEGLSDEAYELF 677
>ref|XP_010541010.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63400-like
[Tarenaya hassleriana] gi|729343728|ref|XP_010541011.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g63400-like [Tarenaya hassleriana]
Length = 674
Score = 99.4 bits (246), Expect = 1e-17
Identities = 49/131 (37%), Positives = 78/131 (59%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
++ E M LF + + G +TY+IL+ G YR G++ +AQ LF EM+ P+ VTY
Sbjct: 455 RVGEGMNLFYEMSRRGLVADTITYSILIQGFYRVGKLDAAQKLFLEMQCKGHHPNLVTYS 514
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
+LDGLCKNG E+A+ LY E + ++ +I +HNV++HG +V I F+ + D
Sbjct: 515 ILLDGLCKNGKTEKALGLYNDLEKSGIELHISSHNVIMHGLC-KVGRVDEALILFNRLLD 573
Query: 1761 RGLVPYTMIYS 1729
+G+ P + Y+
Sbjct: 574 KGVKPDVITYN 584
Score = 68.6 bits (166), Expect = 2e-08
Identities = 37/131 (28%), Positives = 72/131 (54%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
KL A KLF ++ G P +VTY+ILL GL ++G+ A L+ +++ + ++
Sbjct: 490 KLDAAQKLFLEMQCKGHHPNLVTYSILLDGLCKNGKTEKALGLYNDLEKSGIELHISSHN 549
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
++ GLCK G ++EA+ L+ VK ++ T+N++I G + + +++ + ++ +
Sbjct: 550 VIMHGLCKVGRVDEALILFNRLLDKGVKPDVITYNIMISGLCGKSSFCEVETV-IGKMKE 608
Query: 1761 RGLVPYTMIYS 1729
G P IY+
Sbjct: 609 AGCFPDDRIYN 619
Score = 68.2 bits (165), Expect = 3e-08
Identities = 41/130 (31%), Positives = 68/130 (52%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
+ +A+ LF ++ G P VVTY L+ L + GR L +EM ++P+ VT+
Sbjct: 351 MDDALNLFGKMENVGIVPDVVTYTSLINDLSKFGRWDDVARLLSEMVEMKINPNVVTFSV 410
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDR 1759
++D LCK G EA L + + + N T+N +I+G+ + + +F+ E+ R
Sbjct: 411 LIDALCKEGKFLEAEELCEEMIQSGLVPNTVTYNSMINGYCKANRVGEGMNLFY-EMSRR 469
Query: 1758 GLVPYTMIYS 1729
GLV T+ YS
Sbjct: 470 GLVADTITYS 479
Score = 63.9 bits (154), Expect = 5e-07
Identities = 37/128 (28%), Positives = 66/128 (51%)
Frame = -3
Query: 2112 EAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTML 1933
+ +L + + P VVT+++L+ L ++G+ A+ L EM L P+ VTY +M+
Sbjct: 388 DVARLLSEMVEMKINPNVVTFSVLIDALCKEGKFLEAEELCEEMIQSGLVPNTVTYNSMI 447
Query: 1932 DGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPDRGL 1753
+G CK + E + L+ + A+ T++++I GF+ RV Q F E+ +G
Sbjct: 448 NGYCKANRVGEGMNLFYEMSRRGLVADTITYSILIQGFY-RVGKLDAAQKLFLEMQCKGH 506
Query: 1752 VPYTMIYS 1729
P + YS
Sbjct: 507 HPNLVTYS 514
Score = 63.5 bits (153), Expect = 7e-07
Identities = 31/100 (31%), Positives = 53/100 (53%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
+ +A+ L + + G+KP V+TYN L GL G++ A +L +M P+ VTY
Sbjct: 175 ISDALSLVDQMLKEGYKPNVITYNTLAHGLCIHGKISVALSLVDQMVKEGYKPNVVTYTI 234
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGF 1819
++ G C G + A++L + N+ T+N +I+GF
Sbjct: 235 LVHGFCIQGKISAALSLVDQMVKEGYQPNVVTYNTLINGF 274
Score = 62.0 bits (149), Expect = 2e-06
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = -3
Query: 2076 GFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGTMLDGLCKNGHLEEA 1897
G+KP VVTY+ L G G + A +L +M P+ +TY T+ GLC +G + A
Sbjct: 154 GYKPDVVTYDTLAYGFCIQGNISDALSLVDQMLKEGYKPNVITYNTLAHGLCIHGKISVA 213
Query: 1896 IALYKTAESTSVKANIDTHNVVIHGF 1819
++L K N+ T+ +++HGF
Sbjct: 214 LSLVDQMVKEGYKPNVVTYTILVHGF 239
Score = 61.6 bits (148), Expect = 3e-06
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K+ A+ L + + G+KP VVTY IL+ G G++ +A +L +M P+ VTY
Sbjct: 209 KISVALSLVDQMVKEGYKPNVVTYTILVHGFCIQGKISAALSLVDQMVKEGYQPNVVTYN 268
Query: 1941 TMLDGLCKNGHLEEAIALYKTAEST-SVKANIDTHNVVIHG 1822
T+++G C + EA++L T + +I T+ VVI G
Sbjct: 269 TLINGFCLESRISEALSLLDEMMLTMDCQPDIVTYAVVIKG 309
>gb|KDO45527.1| hypothetical protein CISIN_1g040279mg [Citrus sinensis]
Length = 626
Score = 99.4 bits (246), Expect = 1e-17
Identities = 52/133 (39%), Positives = 81/133 (60%), Gaps = 3/133 (2%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
+ EAM L++ + NG + TV+TYN LL+GL++ G+ G AQ LF EMK + + P TY
Sbjct: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFE--RVAN-WKMQQIFFDEI 1768
++DGLCKN ++EA+ L+ E + I+ N +I G + R+ N W++ F ++
Sbjct: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL----FHKL 464
Query: 1767 PDRGLVPYTMIYS 1729
P +GLVP + YS
Sbjct: 465 PQKGLVPTVVTYS 477
Score = 75.5 bits (184), Expect = 2e-10
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Frame = -3
Query: 2118 LHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYGT 1939
+ EA+KLF L+ N F+ + +N L+ GL + GR+ +A LF ++ L P+ VTY
Sbjct: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
Query: 1938 MLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEI-PD 1762
M+ GLC+ G LE+A E N+ T N ++HGF + K+ ++ P+
Sbjct: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
Query: 1761 RGLVPYTMIYS 1729
R LVP +S
Sbjct: 539 RNLVPDDTTFS 549
Score = 67.4 bits (163), Expect = 5e-08
Identities = 40/131 (30%), Positives = 70/131 (53%)
Frame = -3
Query: 2121 KLHEAMKLFKNLKQNGFKPTVVTYNILLAGLYRDGRVGSAQTLFTEMKSFCLSPSEVTYG 1942
K++EA L + + Q G P TYN L+ G GR+ +A+ +F M S + V+Y
Sbjct: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
Query: 1941 TMLDGLCKNGHLEEAIALYKTAESTSVKANIDTHNVVIHGFFERVANWKMQQIFFDEIPD 1762
+++G CK ++EEA++LY+ S V+ + T+N ++ G F+ Q++ FDE+
Sbjct: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL-FDEMKL 396
Query: 1761 RGLVPYTMIYS 1729
+ P Y+
Sbjct: 397 YNVEPDLSTYN 407
Score = 60.1 bits (144), Expect = 8e-06
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Frame = -3
Query: 2106 MKLFKNLKQNGFKPTVVTYNILL-------AGLYRDGRVGSAQTLFTEMKSFCLSPSEVT 1948
+ ++ L G P +T NIL+ GL + R+ A LF M +F + P +T
Sbjct: 95 ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
Query: 1947 YGTMLDGLCKNGHLEEAIALYKTAESTSV------KANIDTHNVVIHGFFERVANWKMQQ 1786
YGT+++G C+ G+L A+ L+K S K NI +++++I + K ++
Sbjct: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
Query: 1785 IFFDEIPDRGLVPYTMI---------YSGQWNFIRG 1705
+F E+ RG+ P ++ +G W + G
Sbjct: 215 LFL-EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249