BLASTX nr result
ID: Papaver29_contig00018790
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00018790
(3830 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 1612 0.0
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 1605 0.0
ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1593 0.0
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 1589 0.0
ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1588 0.0
ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1585 0.0
ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1582 0.0
ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 1576 0.0
ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1575 0.0
ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polyme... 1574 0.0
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 1561 0.0
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca... 1558 0.0
ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [P... 1551 0.0
ref|XP_004291459.2| PREDICTED: RNA-dependent RNA polymerase 6 is... 1546 0.0
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun... 1545 0.0
ref|XP_011459183.1| PREDICTED: RNA-dependent RNA polymerase 6 is... 1542 0.0
ref|XP_010048973.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1529 0.0
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1529 0.0
gb|KDO61726.1| hypothetical protein CISIN_1g041430mg [Citrus sin... 1528 0.0
gb|KHG28504.1| RNA-dependent RNA polymerase 6 -like protein [Gos... 1527 0.0
>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1198
Score = 1612 bits (4173), Expect = 0.0
Identities = 780/1177 (66%), Positives = 928/1177 (78%), Gaps = 5/1177 (0%)
Frame = -1
Query: 3527 ERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITNT 3348
E K+ ++TQVSLGGFD VTAK+L +++E+EIG+ WRCRLK SWTPPES NF+IT+
Sbjct: 4 EGSAKETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEITDI 63
Query: 3347 RDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNTR 3168
+ +D+ +VEPHAFVHFA P SAT D A R +L LN K L +LGPE+ F +N R
Sbjct: 64 TKITRTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTLNQR 123
Query: 3167 RMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSFK 2988
R + PF GVGVEIGT VSRDEF +GW+GPP G DF +DPFDG+C+ F++ TAFSFK
Sbjct: 124 RRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAFSFK 183
Query: 2987 GTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVPF 2808
T+ HAV+KCDFK EF VRDINE++ Y + V+ LQL S+P ++YRTADDDI +VPF
Sbjct: 184 STAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLASAPRVWYRTADDDIEVSVPF 243
Query: 2807 DLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIPYDCPAP- 2631
DLLDD+DPWIRTTDFT++ IGRC+SYR+ +PPR G KL++A+++LK+ R+ P
Sbjct: 244 DLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLRRPI 303
Query: 2630 KFHEEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRSHDR 2451
+ +EPDFG PM DPFFC H KE I+F++LFLVNA +HKGIF+ QLS+ FF+LLR+
Sbjct: 304 RIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQPT 363
Query: 2450 EVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKA 2271
EVNVAAL +IY + PVFD ++L+ Q LLKNPK K+ K L D AE+RRL+ITPTKA
Sbjct: 364 EVNVAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLVITPTKA 423
Query: 2270 YCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQ 2091
YCLPPEVELSNR+LRKY++ ADRFLRVTFMDEG Q +NSN L Y+ APIVR +T SFPQ
Sbjct: 424 YCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAITSYSFPQ 483
Query: 2090 KTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMGKFT 1911
KT +F RV++IL +GFYLCGR+YSFLAFSSNQLRDRSAWFFAE NI V IKSWMGKFT
Sbjct: 484 KTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMGKFT 543
Query: 1910 DKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAD 1731
+KN+AKC ARMG CFSST+AT+EVP E+VN +LPDI+RNGY FSDGIG ITPDLA+EVA+
Sbjct: 544 NKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLAREVAE 603
Query: 1730 KLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQ 1551
KL+ +PPCAYQIR+AGCKGVVACWPE+ D RLS+R SM KFQS HT+LEI SWTRFQ
Sbjct: 604 KLKFDFDPPCAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEICSWTRFQ 663
Query: 1550 PGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNTAAM 1371
PGFLNRQII LLSAL VPD+VF MQ MV KL +L ++D+AFDVLT+SCAEQGN AA+
Sbjct: 664 PGFLNRQIITLLSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCAEQGNVAAI 723
Query: 1370 MLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFI 1191
ML AGFKPQ EPHLRGMLT +RA Q L EK RIFVP GRWLMGC DELGVLEQGQCFI
Sbjct: 724 MLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFI 783
Query: 1190 QSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLV 1011
Q S LENCF G FS TK +LQV+KGTVV+AKNPCLHPGDIRILEAVD PGLHHL
Sbjct: 784 QVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVDAPGLHHLY 843
Query: 1010 DCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQRAI 831
DCLVFPQKG+RPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPM Y E ++L R +
Sbjct: 844 DCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLTRPV 903
Query: 830 NQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKTGKV 651
N DIV+FF KNM NE LG ICN+HVV ADLS+YGA+DEKC+ LAELAATAVDFPKTGK+
Sbjct: 904 NHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKTGKI 963
Query: 650 VAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQVD- 474
V+MP +LKPK+YPDFMGKE+ SYKSKK+LG LYR+IKD+ D D D A +++
Sbjct: 964 VSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYD------DDDVAASSELNF 1017
Query: 473 ---DIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKY 303
DIPYD DLEV G+ DFI +AWDRKC YDGQLN LL Q+ VK EEEVVTGHVWSMPK
Sbjct: 1018 VRGDIPYDLDLEVLGATDFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKG 1077
Query: 302 NNRXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHP 123
++R +YN ++REF++VF+ + D L + EKN +YE+KASAWYQVTYHP
Sbjct: 1078 SSRKQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHP 1137
Query: 122 RWVKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIR 12
W++KS+EL++SD + MLSFAW+ A+YL RIKIR
Sbjct: 1138 HWIQKSLELQDSDGAGISVMLSFAWIAADYLARIKIR 1174
>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1200
Score = 1605 bits (4155), Expect = 0.0
Identities = 770/1179 (65%), Positives = 929/1179 (78%), Gaps = 4/1179 (0%)
Frame = -1
Query: 3527 ERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITNT 3348
E K+ ++TQVS+GGFD VTAK+L +++++ IG+ WRCRLK SWTPPES NF+IT+
Sbjct: 4 EGSAKETVVTQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTSWTPPESYPNFEITDI 63
Query: 3347 RDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNTR 3168
++ +D+ +V PHAFVHFA P SAT + +GR +L LN K L V+LGP++ F +N R
Sbjct: 64 TKIERTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTLNQR 123
Query: 3167 RMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSFK 2988
R PF VG EIG VSRDEF +GW+GPP G DF +DPFDG+CK F++ TAFS K
Sbjct: 124 RRTTTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTAFSLK 183
Query: 2987 GTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVPF 2808
TS HAV+KCDFK EF VRDINE+ Y + V+ LQL S+P ++YRTADDDI A VPF
Sbjct: 184 STSEHAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAWVPF 243
Query: 2807 DLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIPYDCPAPK 2628
DLLDD+DPWIRTTDFT++ IGRC+SYR+ +PPR G KL++A++YLK+ R+ +
Sbjct: 244 DLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQVLQEENHR 303
Query: 2627 FH----EEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRS 2460
+EPDFG PM DPFFC H KE I+FE+LFLVNA +HKGIF+ QLS+ FF+LLR+
Sbjct: 304 RRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFDLLRN 363
Query: 2459 HDREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITP 2280
EVNV+AL +I + + PVF+ RL+ VQ LLKNP + K+ K LGD E+RRL+ITP
Sbjct: 364 QHTEVNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRLVITP 423
Query: 2279 TKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNS 2100
TKAYCLPPEVELSNR+LRKY++ ADRFLRVTFMDEG Q++NSNVL YYVAPIVRD+T NS
Sbjct: 424 TKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNS 483
Query: 2099 FPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMG 1920
FPQKT +F RV++IL +GFYLCGR+YSFLAFS+NQLRD+SAWFF+E NI V D+KSWMG
Sbjct: 484 FPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEERNISVLDVKSWMG 543
Query: 1919 KFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKE 1740
KFT++N+AKC ARMG CFSST+AT+EVP E+VN +LPDIERNGYVFSDGIG ITPDLA+E
Sbjct: 544 KFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDLARE 603
Query: 1739 VADKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWT 1560
VA+KL+L +PPCAYQIR+AGCKGVVACWP K D RLS+RPSM KFQS HT LEI SWT
Sbjct: 604 VAEKLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSMNKFQSNHTTLEICSWT 663
Query: 1559 RFQPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNT 1380
RFQPGFLNRQII LLS L VPD+VF MQ TMV KL + N+D+AFDVLT+SCA+QGN
Sbjct: 664 RFQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQGNV 723
Query: 1379 AAMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQ 1200
AA+ML AGFKP EPHLRGMLT +RA Q DL EKTRIFVP GRWLMGC DELG+LEQGQ
Sbjct: 724 AAIMLSAGFKPDREPHLRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGCLDELGMLEQGQ 783
Query: 1199 CFIQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLH 1020
CFIQ S SLE CF G FS + +LQVIKGTVV+AKNPCLHPGD+R+LEAVD PGLH
Sbjct: 784 CFIQVSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLH 843
Query: 1019 HLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQ 840
HL DCLVFPQKG+RPH NEASGSDLDGDLYFVTWDENLIPPSKRSWIPM Y E + L
Sbjct: 844 HLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLA 903
Query: 839 RAINQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKT 660
R +N DI++FF KNMVN+ LG ICN+HVVHADLS+YGA D+ C+ LAELAATAVDFPKT
Sbjct: 904 RPVNHQDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKT 963
Query: 659 GKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQ 480
GKVV+MP LKPKMYPDFMGKE++ SYKS+K+LG LYR+IKD+ D V S + L
Sbjct: 964 GKVVSMPPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLV--- 1020
Query: 479 VDDIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYN 300
DIPYD+DLEV G++D+I +AWD+KC YDGQLN LL Q+ VK EEEVVTGH+WSMPKY+
Sbjct: 1021 PGDIPYDSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYS 1080
Query: 299 NRXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPR 120
+R +YNS+++EF+++F+ + + + L + EKN +YEQKASAWYQV YHP
Sbjct: 1081 SRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPH 1140
Query: 119 WVKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRRD 3
WVKKS+EL++ D + MLSFAW+ A+YL RIKIR R+
Sbjct: 1141 WVKKSLELQDPDGAGTSVMLSFAWIAADYLARIKIRHRE 1179
>ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1195
Score = 1593 bits (4124), Expect = 0.0
Identities = 772/1175 (65%), Positives = 923/1175 (78%), Gaps = 3/1175 (0%)
Frame = -1
Query: 3527 ERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITNT 3348
E K+ ++TQVS+GGFD VTAK+L +++E+EIG+ WRCRLK SWTPPES NF+I +
Sbjct: 4 EGSAKETVVTQVSIGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEIADL 63
Query: 3347 RDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNTR 3168
+ +D+ +VEPHAFVHFA P+SAT D A R +L LN K L +LGPE+ F +N R
Sbjct: 64 TKITRTEDYRRVEPHAFVHFALPESATWAIDAADRCELFLNNKGLKASLGPENPFTLNQR 123
Query: 3167 RMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSFK 2988
R + PF V VEIGT VSRDEF +GW+GPP G DF +DPFDG+C+ F++ TAFSFK
Sbjct: 124 RRKTTPFKLSDVDVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAFSFK 183
Query: 2987 GTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVPF 2808
T+ HAV+KCDFK EF VRDINE++ Y + V+ LQL S+P ++YRTADDDI +VPF
Sbjct: 184 STAEHAVIKCDFKVEFLVRDINEIKQYKETSCLVLLLQLASAPWVWYRTADDDIEVSVPF 243
Query: 2807 DLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIPYDCPAP- 2631
DLLDD+DPWIRTTDFT++ IGRC+SYR+ +PPR G KL++A+++LK+ R+ P
Sbjct: 244 DLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLRRPI 303
Query: 2630 KFHEEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRSHDR 2451
+ +EPDFG PM DPFFC H KE I+F++LFLVNA +HKGIF+ QLS+ FF+LLR+
Sbjct: 304 RIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQPT 363
Query: 2450 EVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKA 2271
EVNVAAL +IY + PVFD ++L+ Q LLKNPK+ K+ K L D AE+RRLIITPTKA
Sbjct: 364 EVNVAALKHIYPYRRPVFDAYKKLKVTQEWLLKNPKLFKNQKKLDDIAEIRRLIITPTKA 423
Query: 2270 YCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQ 2091
YCLPPEVELSNR+LRKY++ ADRFLRVTFMDEG Q +NSN L Y+ APIVR +T SFPQ
Sbjct: 424 YCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGVQTMNSNALNYFAAPIVRAITSYSFPQ 483
Query: 2090 KTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMGKFT 1911
KT +F RV++IL +GFYLCGR+YSFLAFSSNQLRDRSAWFFAE NI V IKSWMGKFT
Sbjct: 484 KTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMGKFT 543
Query: 1910 DKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAD 1731
+KN+AKC ARMG CFSST+AT+EVP E+VN +LPDI+RNGY FSDGIG ITPDLA+EVA+
Sbjct: 544 NKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLAREVAE 603
Query: 1730 KLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQ 1551
KL+ +PP AYQIR+AGCKGVVACWPE+ D RLS+R SM KFQS HT+LEI SWTRFQ
Sbjct: 604 KLKFDFDPPSAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEICSWTRFQ 663
Query: 1550 PGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNTAAM 1371
PGFLNRQII LLSAL VPD+VF MQ MV KL +L ++D+AFDVLT+SCAE GN AA+
Sbjct: 664 PGFLNRQIITLLSALNVPDAVFWKMQEIMVSKLNQMLVDSDVAFDVLTASCAELGNVAAI 723
Query: 1370 MLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFI 1191
ML AGFKPQ EPHLRGML +RA Q L EK RIFVP GRWLMGC DEL VLEQGQCFI
Sbjct: 724 MLSAGFKPQKEPHLRGMLNCVRAAQLWGLREKARIFVPSGRWLMGCLDELAVLEQGQCFI 783
Query: 1190 QSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLV 1011
Q S LENCF G FS TK +LQV+KGTVV+AKNPCLHPGDIRILEAVD+PGLHHL
Sbjct: 784 QVSNSYLENCFVKHGSKFSETKRNLQVVKGTVVIAKNPCLHPGDIRILEAVDDPGLHHLY 843
Query: 1010 DCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQRAI 831
DCLVFPQKG+RPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPM Y E ++L R +
Sbjct: 844 DCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLTRPV 903
Query: 830 NQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKTGKV 651
N DI++FF KNM NE LG ICN+HVV ADLS+YGA+DEKC+ LAELAATAVDFPKTGK+
Sbjct: 904 NHQDIIEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKTGKI 963
Query: 650 VAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDS--PDLVVGDSDKDTLAVFQV 477
V+MP +LKPK+YPDFMGKE+ SYKSKK+LG LYR+IKD+ D V SD + F
Sbjct: 964 VSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSDLN----FVP 1019
Query: 476 DDIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNN 297
D+PYD DLEV G+ D+I +AWDRKC YDGQLN LL Q+ VK EEEVVTGHVWSMPK ++
Sbjct: 1020 GDVPYDLDLEVLGATDYISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSS 1079
Query: 296 RXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRW 117
R +YN ++REF++VF+ + D L + EKN +YE+KASAWYQVTYHPRW
Sbjct: 1080 RQQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPRW 1139
Query: 116 VKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIR 12
++KS+EL++SD MLSFAW+ A+YL RIKIR
Sbjct: 1140 IQKSLELQDSD---GAAMLSFAWIAADYLARIKIR 1171
>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 1203
Score = 1589 bits (4115), Expect = 0.0
Identities = 774/1181 (65%), Positives = 910/1181 (77%), Gaps = 7/1181 (0%)
Frame = -1
Query: 3527 ERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITNT 3348
+R +K+ ++TQVS GGFD+DVTA++L +++ EIG WRCRLK SWTPPES NF+IT+T
Sbjct: 4 KRREKETVVTQVSFGGFDKDVTARDLVAYLDNEIGQVWRCRLKTSWTPPESYPNFEITDT 63
Query: 3347 RDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNTR 3168
++ D + +VEPHAFVHFASPDSAT + AG +L NG+ + V+LGPE+ F +N R
Sbjct: 64 AVIQRVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHLNQR 123
Query: 3167 RMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSFK 2988
R PF V VEIGT VSRDEFL+GW+GPP G DF +DPFDG CK FT++TAFSFK
Sbjct: 124 RRTTIPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTAFSFK 183
Query: 2987 GTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVPF 2808
GT+ HAV++CDFK EF VRDINE++ Y D V+ LQL S+P ++YRTADDDI VPF
Sbjct: 184 GTTEHAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLASAPSVWYRTADDDIEVLVPF 243
Query: 2807 DLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIPYDCPAPK 2628
DLLDD+DPWIRTTDFT + IGRCNSYR+ +PPR G KLK A+ +L++ R+ DC
Sbjct: 244 DLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERRV-QEDCLRRP 302
Query: 2627 FH--EEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRSHD 2454
H EP++ PM DPFFC H +E + F L+FLVNA +HKGIF+ QLSD FF+LLR+
Sbjct: 303 LHVTAEPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQLSDSFFDLLRNQP 362
Query: 2453 REVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTK 2274
+VN+AAL +I S K PVFD +RL+ VQ LLKNPK+ +S K L D E+RRL ITPT+
Sbjct: 363 LDVNIAALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDIVEIRRLAITPTR 422
Query: 2273 AYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFP 2094
AYCLPPEVELSNR+LR+Y++ AD+FLRVTFMDEG Q +N+N LTYY APIVRD+T NSF
Sbjct: 423 AYCLPPEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMNANTLTYYCAPIVRDITSNSFS 482
Query: 2093 QKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMGKF 1914
QKT +F RVK+IL DGFYLCGRKYSFLAFSSNQLRDRSAWFFAE VS I++WMGKF
Sbjct: 483 QKTRIFKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKTSVSKIRNWMGKF 542
Query: 1913 TDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKEVA 1734
T++N+AKC ARMG CFSST+ATVEVP + +LPDIERN Y+FSDGIG ITPDLAKEVA
Sbjct: 543 TNRNIAKCAARMGQCFSSTYATVEVPSAEAILDLPDIERNNYIFSDGIGMITPDLAKEVA 602
Query: 1733 DKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRF 1554
+KL+L NPPCAYQIR+AGCKGVVACWP D RLS+R SM KF S HT LEI SWTRF
Sbjct: 603 EKLKLEVNPPCAYQIRYAGCKGVVACWPAHIDGIRLSLRVSMNKFHSNHTTLEICSWTRF 662
Query: 1553 QPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNTAA 1374
QPGFLNRQII LLS L VPD +F MQ MV KL + + D+AFDV+T+SCAEQGNTAA
Sbjct: 663 QPGFLNRQIITLLSTLDVPDEIFWKMQIVMVSKLNQMFMDADVAFDVVTASCAEQGNTAA 722
Query: 1373 MMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCF 1194
+ML AGF P+TEPHL GMLT IRA Q L EKTRIFVP GRWLMGC DELGVLE GQCF
Sbjct: 723 IMLSAGFNPKTEPHLCGMLTCIRAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEHGQCF 782
Query: 1193 IQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHL 1014
IQ S PSLE+CF G FS +K LQV+KGTVVVAKNPCLHPGDIRILEAVD P LHHL
Sbjct: 783 IQVSNPSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRILEAVDAPELHHL 842
Query: 1013 VDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQRA 834
DCLVFPQKGDRPH NEASGSDLDGDLYFVTWDENLIPPSKRSW+PM Y E ++L R
Sbjct: 843 HDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQLNRP 902
Query: 833 INQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKTGK 654
+N DI+DFF KNMVNE LG ICN+HVVHADLS+YGA+DE CIKLAELAATAVDFPKTGK
Sbjct: 903 VNHQDIIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFPKTGK 962
Query: 653 VVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQV- 477
+V MP LKPK+YPDFMGKED+ SY S K+LG LYR++KD D D D D A
Sbjct: 963 LVTMPPHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKD--DYNDDDDDDDDAATSSEL 1020
Query: 476 ----DDIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMP 309
DIPYD DLEV GS+D+I +AWD+KC YDGQL LL Q+ VK EEEVVTGH+WSMP
Sbjct: 1021 NLVRGDIPYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMP 1080
Query: 308 KYNNRXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTY 129
K N+R +Y+S+++EF++VF+ + D + LTE EKN +YEQKASAWYQV Y
Sbjct: 1081 KCNSRKQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAY 1140
Query: 128 HPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRR 6
HP+WV KS+EL+ D MLSFAW+ A+YL RIKIR R
Sbjct: 1141 HPKWVNKSMELQEPDAAGCASMLSFAWIAADYLARIKIRCR 1181
>ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
gi|719995135|ref|XP_010254391.1| PREDICTED: RNA-dependent
RNA polymerase 6-like [Nelumbo nucifera]
gi|719995138|ref|XP_010254392.1| PREDICTED: RNA-dependent
RNA polymerase 6-like [Nelumbo nucifera]
gi|719995142|ref|XP_010254393.1| PREDICTED: RNA-dependent
RNA polymerase 6-like [Nelumbo nucifera]
Length = 1193
Score = 1588 bits (4113), Expect = 0.0
Identities = 774/1180 (65%), Positives = 930/1180 (78%), Gaps = 2/1180 (0%)
Frame = -1
Query: 3536 LGFERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDI 3357
+G E K D+II+QVS GGFD +VTA EL F+EKEIG WRCRLK S TPPES ++D+
Sbjct: 1 MGSEGTKNDMIISQVSFGGFDNNVTASELTDFLEKEIGTIWRCRLKTSSTPPESYPDYDV 60
Query: 3356 TNTRDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLM 3177
T+ ++ D ++KV+PHAFVHF SP++AT+ D AGR L LN L VNLGP+S FL+
Sbjct: 61 TDMDAIQKTDGYDKVKPHAFVHFLSPEAATAALDAAGRCDLVLNRHPLKVNLGPQSPFLL 120
Query: 3176 NTRRMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAF 2997
N RR +IDPF ++IG+ V +DEF++ WK P DF +DPFD +CKI FTKETAF
Sbjct: 121 NQRRRKIDPFKIPDSCIKIGSLVGQDEFVVCWKAPQ--VDFIVDPFDRTCKILFTKETAF 178
Query: 2996 SFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHAT 2817
SFK T + V+KC+FK EFFV DI+ ++ Y + S V+ L L SSP +YYRTADDDI+ +
Sbjct: 179 SFKDTMAYVVIKCNFKLEFFVSDISYIKQYTGRSSLVILLHLRSSPCIYYRTADDDIYDS 238
Query: 2816 VPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIPYDCP 2637
VPFD+LDDEDPWIRTTDFT ++VIGRCNSYRI + PR G +L + + YL+K RI P + P
Sbjct: 239 VPFDMLDDEDPWIRTTDFTPSRVIGRCNSYRISISPRFGPRLNKVMNYLRKHRI-PDESP 297
Query: 2636 AP--KFHEEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLR 2463
+ +EP+FG M + FFC KE +SFE +F++NA IHKGI + QLSD FFELLR
Sbjct: 298 RMPLRIRDEPNFGMLMSEFFFCIDHKEGMSFETIFMLNAVIHKGIINQHQLSDEFFELLR 357
Query: 2462 SHDREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIIT 2283
S +VNV AL IYS + PV + L+ Q LL NPK+IK KG D E+R+L+IT
Sbjct: 358 SQSTDVNVTALQNIYSYRQPVLNAYTSLKDAQRCLLDNPKLIKISKGSDDFVEMRKLVIT 417
Query: 2282 PTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKN 2103
PTKAYCLPPEVELSNR+LRKY+ A+RFLRV+F DE QQL+SN L YYVAPIVRD+T N
Sbjct: 418 PTKAYCLPPEVELSNRVLRKYKHVANRFLRVSFKDERMQQLSSNALNYYVAPIVRDITSN 477
Query: 2102 SFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWM 1923
FPQKT VFNRVKTIL +GF+LCGRKYSFLAFSSNQLRDRSAWFFAE NIKV ++K WM
Sbjct: 478 PFPQKTTVFNRVKTILSNGFFLCGRKYSFLAFSSNQLRDRSAWFFAEDKNIKVIEVKKWM 537
Query: 1922 GKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAK 1743
G+FT++NVAKC ARMG+CFSST+ATVEVP ++VN LPDIERNGYVFSDGIG +TPDL+
Sbjct: 538 GRFTNRNVAKCAARMGLCFSSTYATVEVPLKEVNLELPDIERNGYVFSDGIGMLTPDLSM 597
Query: 1742 EVADKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSW 1563
EVA+KLQLT+NPPCAYQIR+AGCKGV+ CWP K D RLS+RPSM KF+S+HT+LE+ SW
Sbjct: 598 EVAEKLQLTANPPCAYQIRYAGCKGVIVCWPGKEDGIRLSLRPSMNKFESRHTILEVCSW 657
Query: 1562 TRFQPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGN 1383
TRFQP +LNRQII LLSAL VPD VFS MQ +MV KL ++ENTD+AFDV+TSSCAEQGN
Sbjct: 658 TRFQPSYLNRQIITLLSALCVPDDVFSRMQDSMVSKLNQMIENTDVAFDVVTSSCAEQGN 717
Query: 1382 TAAMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQG 1203
TAA+ML AGFKPQ EPHL+GML+ IRA Q RDLLEK+RIFVP GRWLMGC DEL VLE+G
Sbjct: 718 TAAIMLSAGFKPQMEPHLKGMLSCIRAAQLRDLLEKSRIFVPSGRWLMGCLDELAVLEEG 777
Query: 1202 QCFIQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGL 1023
QCFIQ S PSLENCFS G FS K + QV+KG V +AKNPCLHPGDIRILEA+D P L
Sbjct: 778 QCFIQVSKPSLENCFSKHGSRFSEVKKNTQVVKGIVAIAKNPCLHPGDIRILEAIDVPSL 837
Query: 1022 HHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKL 843
HHL+DCLVFPQKGDRPH NEASGSDLDGDLYFVTWDE+LIPPSK+S +PMDYSP E +KL
Sbjct: 838 HHLIDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDEHLIPPSKQSLVPMDYSPAEVKKL 897
Query: 842 QRAINQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPK 663
R +N D++DFF+K+MVNEKLG ICN+HVVHADLS+YGA+DEKCI+LAELAATAVDFPK
Sbjct: 898 PRDVNHRDLIDFFMKSMVNEKLGVICNAHVVHADLSEYGALDEKCIQLAELAATAVDFPK 957
Query: 662 TGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVF 483
TGKVV +PQELKPK YPDFMGKE+F SYKS K+LG+LYR+IKD D V +S+ F
Sbjct: 958 TGKVVTVPQELKPKRYPDFMGKEEFQSYKSNKILGKLYRKIKDFSDEDVEESE----ITF 1013
Query: 482 QVDDIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKY 303
+DIPYD LEV GS+D + +AW+ KCL+D QL LL Q+ V EEEVVTGH+WSMPKY
Sbjct: 1014 AAEDIPYDVHLEVLGSSDHLADAWNLKCLHDAQLTTLLGQYKVNREEEVVTGHIWSMPKY 1073
Query: 302 NNRXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHP 123
N+ AYN++++EF++ F+ + E Q LT+ EKNTIYEQKASAWYQVTYHP
Sbjct: 1074 NSNKQGELKERLKNAYNALKKEFRQAFEKIDETLQ-LTDDEKNTIYEQKASAWYQVTYHP 1132
Query: 122 RWVKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRRD 3
RW+ K+++LR +D+ MLSFAW+PA+YLVRIKI+ RD
Sbjct: 1133 RWIMKTLKLREHEDESNPAMLSFAWIPADYLVRIKIKHRD 1172
>ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
gi|643731347|gb|KDP38635.1| hypothetical protein
JCGZ_03988 [Jatropha curcas]
Length = 1198
Score = 1585 bits (4103), Expect = 0.0
Identities = 772/1180 (65%), Positives = 910/1180 (77%), Gaps = 3/1180 (0%)
Frame = -1
Query: 3536 LGFERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDI 3357
+G ER +KD ++TQVS GGF+ V AK+L ++E+ IG WRCRLK SWTPPES NF I
Sbjct: 1 MGTERSEKDTVVTQVSFGGFENHVNAKDLVAYLEEVIGQVWRCRLKTSWTPPESYPNFKI 60
Query: 3356 TNTRDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLM 3177
T+T + +++++VEPHAFVHFA +SAT + AGR +L LN + L V+LGPE+ F +
Sbjct: 61 TDTAGIHRTNEYKRVEPHAFVHFALAESATWAKNAAGRCELFLNDRPLKVSLGPENPFTL 120
Query: 3176 NTRRMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAF 2997
N RR + P V +EIG VSRDEFL+GW+GPP G DF +DPFDG+CK FT++TAF
Sbjct: 121 NQRRRKTIPSKLSDVCIEIGMMVSRDEFLVGWRGPPSGVDFLVDPFDGTCKFCFTRDTAF 180
Query: 2996 SFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHAT 2817
S K T+ HAV++CDFK EF VRDINE++ Y D V+ LQL S+P ++YRTADDDI
Sbjct: 181 SIKDTNKHAVIRCDFKLEFLVRDINEIKQYKDTSYLVILLQLASAPWVWYRTADDDIEVL 240
Query: 2816 VPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIPYDCP 2637
VPF+LLDD+DPWIRTTDFT + IGRCNSYR+ +PPR G KL+ AI YLK+ R+
Sbjct: 241 VPFNLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLERAINYLKERRVQVDSLR 300
Query: 2636 AP-KFHEEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRS 2460
P K EPD+G PM DPFFC H KE I+FE++FLVNA +HKGIF+ QLSD FF+LLR+
Sbjct: 301 RPLKILNEPDYGMPMSDPFFCIHRKEGIAFEIVFLVNAVMHKGIFNQHQLSDDFFDLLRN 360
Query: 2459 HDREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITP 2280
++NVAAL +I S K PVFD RL+ VQ LLKNPK+ K K L D ++RRL ITP
Sbjct: 361 QPADINVAALKHICSYKRPVFDAHRRLKAVQEWLLKNPKLFKCPKQLDDIVQIRRLAITP 420
Query: 2279 TKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNS 2100
T+AYCLPPE+ELSNR+LRKY+ FADRFLRVTFMDEG Q +N+N LTYYVAPIVRD+T S
Sbjct: 421 TRAYCLPPEIELSNRVLRKYKNFADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS 480
Query: 2099 FPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMG 1920
F QKT +F RVK+IL DGFYLCGR+YSFLAFSSNQLRDRSAWFFAE I+V I+ WMG
Sbjct: 481 FSQKTRIFKRVKSILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDGKIRVDQIRKWMG 540
Query: 1919 KFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKE 1740
KFT+KN+AKC ARMG CFSST+ATVEVP +VN PDIERNGY FSDGIG ITPDLAK
Sbjct: 541 KFTNKNIAKCAARMGQCFSSTYATVEVPSAEVNLAHPDIERNGYTFSDGIGMITPDLAKA 600
Query: 1739 VADKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWT 1560
VA+KL+L NPPCAYQIR+AGCKGVVACWP + D RLS+RPSM KFQS HT LEI SWT
Sbjct: 601 VAEKLKLDINPPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWT 660
Query: 1559 RFQPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNT 1380
RFQPGFLNRQII LLS L V D +F MQ MV KL +L + D+AFDV+T+SC EQGNT
Sbjct: 661 RFQPGFLNRQIITLLSTLNVSDEIFWKMQIAMVSKLNKMLTDADVAFDVITASCTEQGNT 720
Query: 1379 AAMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQ 1200
AA+ML AGFKPQ EPHLRGMLT IRA QF DL EK RIFV GRWLMGC DELGVLEQGQ
Sbjct: 721 AALMLSAGFKPQNEPHLRGMLTCIRAAQFCDLREKARIFVSSGRWLMGCLDELGVLEQGQ 780
Query: 1199 CFIQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLH 1020
CFIQ S PSLE CFS G FS TK +LQVI GTVV+AKNPCLHPGD+RILEAVD PGL
Sbjct: 781 CFIQVSNPSLETCFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDVRILEAVDAPGLC 840
Query: 1019 HLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQ 840
HL DCLVFPQKGDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PM Y E + L
Sbjct: 841 HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTPMQYDAAEPKLLS 900
Query: 839 RAINQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKT 660
R ++ DI+DFF KNMVNE LG ICN+HVV ADLS+YGA+DE CIKLAELAATAVDFPKT
Sbjct: 901 RPVSHQDIIDFFAKNMVNESLGAICNAHVVRADLSEYGALDENCIKLAELAATAVDFPKT 960
Query: 659 GKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQ 480
GK+V +PQ LKPKMYPDFMGKE++ SYKS K+LG LYR IKD+ GD D +
Sbjct: 961 GKLVTLPQYLKPKMYPDFMGKEEYQSYKSTKILGRLYRDIKDA----YGDDDAAASSELN 1016
Query: 479 VD--DIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPK 306
DIPYDT+LEV GSAD+I EAWD+KC YDGQL LL Q+ VK EEE+VTGH+WSMP
Sbjct: 1017 CSSGDIPYDTNLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKKEEELVTGHIWSMPM 1076
Query: 305 YNNRXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYH 126
YN+R +Y+++++EF++VF+ + D + LT+ EKN +YE+KASAWYQVTYH
Sbjct: 1077 YNSRKLGELKERLKHSYSALKKEFRQVFEKMDLDFEQLTDDEKNLLYERKASAWYQVTYH 1136
Query: 125 PRWVKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRR 6
P+W+KKS+EL+ D +LSFAW+ A+YL RIKI+ R
Sbjct: 1137 PKWIKKSLELQEPDAAGNATILSFAWIAADYLARIKIKHR 1176
>ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1200
Score = 1582 bits (4097), Expect = 0.0
Identities = 761/1186 (64%), Positives = 928/1186 (78%), Gaps = 11/1186 (0%)
Frame = -1
Query: 3527 ERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITNT 3348
E K+ ++TQVS+GGF VTAK+L++++++ IG+ WRCRLK SWTPPES NF+IT+
Sbjct: 4 EGSAKETVVTQVSVGGFGIHVTAKDLSEYLDRAIGLVWRCRLKTSWTPPESYPNFEITDI 63
Query: 3347 RDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNTR 3168
++ +D+ +V PHAFVHFA P SAT + + R +L LN K L V+LGP++ F +N +
Sbjct: 64 TKIERTEDYRRVVPHAFVHFALPQSATWAMNASERCELFLNDKALKVSLGPKNPFTLNQQ 123
Query: 3167 RMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSFK 2988
R PF VG EIG+ VS DEF +GW+GPP G DF +DPFDG+C+ F++ TAFS K
Sbjct: 124 RRTTTPFKLSDVGFEIGSLVSHDEFFVGWRGPPSGVDFLVDPFDGTCRFCFSRNTAFSLK 183
Query: 2987 GTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVPF 2808
TS HAV+KC FK EF VRDINE+ Y + V+ LQL S+P ++YRTADDDI A VPF
Sbjct: 184 STSEHAVIKCAFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAWVPF 243
Query: 2807 DLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIPYDCPAPK 2628
DLLDD+DPWIRTTDFT + IGRC+SYR+ +PPR G KL++A++YLK+ R+ + +
Sbjct: 244 DLLDDDDPWIRTTDFTGSGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRV---EVLQEE 300
Query: 2627 FH-------EEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFEL 2469
H +EPDFG PM DPFFC H KE I+F++LFLVNA +HKGIF+ QLS+ FF+L
Sbjct: 301 NHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDL 360
Query: 2468 LRSHDREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLI 2289
LR+ EVNV+AL +I + + PVF+ +RL+ VQ LLKNP + K+ K LGD E+RRL+
Sbjct: 361 LRNQHTEVNVSALKHICTYRRPVFNAYKRLKAVQEWLLKNPNLFKNPKQLGDIVEIRRLV 420
Query: 2288 ITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMT 2109
ITPTKAYCLPPEVELSNR+LRKY++ ADRFLRVTFMDEG Q++NSNVL YYVAPIVRD+T
Sbjct: 421 ITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDIT 480
Query: 2108 KNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKS 1929
NSF QKT +F RV++IL +GFYLCGR+YSFLAFS+NQLRD+SAWFFAE N+ V DIKS
Sbjct: 481 SNSFHQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFAEERNVSVLDIKS 540
Query: 1928 WMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDL 1749
WMGKFT++N+AKC ARMG CFSST+AT+EVP E+VN +LPDIERNGYVFSDGIG ITPDL
Sbjct: 541 WMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNFDLPDIERNGYVFSDGIGIITPDL 600
Query: 1748 AKEVADKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIV 1569
A+EVA+KL+L +PPCAYQIR+AGCKGVVACWP K D LS+RPSM KFQS HT LEI
Sbjct: 601 AREVAEKLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVHLSLRPSMNKFQSNHTTLEIC 660
Query: 1568 SWTRFQPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQ 1389
SWTRFQPGFLNRQII LLS L VPD+VF MQ TMV KL + N+D+AFDVLT+SCA+Q
Sbjct: 661 SWTRFQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQ 720
Query: 1388 GNTAAMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLE 1209
GN AA+ML AGFKPQ EPHLRGMLT +RA Q L EK RIFVP GRWLMGC DELG+LE
Sbjct: 721 GNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGMLE 780
Query: 1208 QGQCFIQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNP 1029
QGQCFIQ S SLE CF G FS K +LQV+KGTVV+AKNPCLHPGD+R+LEAVD P
Sbjct: 781 QGQCFIQVSNSSLEKCFIKHGAKFSEAKKNLQVVKGTVVIAKNPCLHPGDVRVLEAVDVP 840
Query: 1028 GLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQ 849
GLHHL DCLVFPQKG+RPH NEASGSDLDGDLYFVTWDENLIPPSKRSWIPM Y E +
Sbjct: 841 GLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAK 900
Query: 848 KLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDF 669
L R +N DI++FF KNMVNE LG ICN+HVVHADLS++GAMDEKC+ LAELAATAVDF
Sbjct: 901 LLARPVNHQDIIEFFAKNMVNENLGAICNAHVVHADLSEHGAMDEKCLTLAELAATAVDF 960
Query: 668 PKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLA 489
PKTGKVV MP LKPK+YPDFMGKE++ SYKS+K+LG LYR+IKD+ D+D A
Sbjct: 961 PKTGKVVTMPSYLKPKVYPDFMGKEEYQSYKSEKILGRLYRQIKDA-------YDEDVAA 1013
Query: 488 VFQVD----DIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHV 321
+++ DIPYD+DLEV G++D+I +AWD+KC YDGQLN LL Q+ VK EEE+VTGH+
Sbjct: 1014 SSELNPVPGDIPYDSDLEVVGASDYINDAWDQKCSYDGQLNGLLSQYKVKREEELVTGHI 1073
Query: 320 WSMPKYNNRXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWY 141
WSMPKY++R +YNS+++EF+++F+ + + + L + EKN +YEQKASAWY
Sbjct: 1074 WSMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWY 1133
Query: 140 QVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRRD 3
QV YHP WVKKS+EL++ D + MLSF W+ A+YL RIKIR R+
Sbjct: 1134 QVAYHPHWVKKSLELQDPDGAGTSVMLSFGWIAADYLARIKIRHRE 1179
>ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
SHL2 [Phoenix dactylifera]
Length = 1198
Score = 1576 bits (4081), Expect = 0.0
Identities = 770/1183 (65%), Positives = 920/1183 (77%), Gaps = 2/1183 (0%)
Frame = -1
Query: 3545 MGSLGF-ERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLL 3369
MGSLG ERD+K+L+++QVS GGFD+ V+AK+L F+E E G+ WRCR+K SWTPPES
Sbjct: 1 MGSLGADERDQKELVVSQVSFGGFDERVSAKDLTDFLEHEAGLIWRCRVKNSWTPPESYP 60
Query: 3368 NFDITNTRDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPES 3189
++D+ + D++ DD+ KV PHAFVHFA+ D+A + AG+ +L L G L N G +S
Sbjct: 61 DYDVLDVSDVRRKDDYPKVVPHAFVHFATLDAAKRAINAAGKCELVLQGCPLRANSGTDS 120
Query: 3188 SFLMNTRRMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTK 3009
SF ++ RR +DPF F VGVEIGT SRDEFL+ WKGP G DF IDPFDG C+I F+K
Sbjct: 121 SFRISRRRT-MDPFRFTDVGVEIGTLASRDEFLVAWKGPKSGVDFLIDPFDGRCRILFSK 179
Query: 3008 ETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDD 2829
ETAF+FK AVLKCDFK EF RDINEV+ + DQ M QL S+P +YYRTADDD
Sbjct: 180 ETAFAFKDIKEMAVLKCDFKVEFLARDINEVKLFTDQYPPAMLFQLASTPWVYYRTADDD 239
Query: 2828 IHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIP 2649
I T PF LLDDEDPWIRTTDFT I RC SYRI PR G+ LKE++ YLK+ RI
Sbjct: 240 ILVTAPFSLLDDEDPWIRTTDFTPGGAISRCCSYRISFSPRYGRILKESLAYLKERRIAE 299
Query: 2648 YDCPAPKFH-EEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFE 2472
+ P EEPDFG+ MPDPFF KE ISF ++FLV+A +HKGI + QLS+ FF
Sbjct: 300 HRPKRPLVVLEEPDFGTLMPDPFFSVQHKEGISFSIMFLVDALVHKGIVNQHQLSEEFFA 359
Query: 2471 LLRSHDREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRL 2292
LLRS +N AL +I++ KTP+FD RL+ VQ LLKNPK +KS K DS+EVRRL
Sbjct: 360 LLRSQSDSMNETALRHIWAYKTPIFDACRRLKLVQDWLLKNPKFLKSSKLSDDSSEVRRL 419
Query: 2291 IITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDM 2112
+ITPTKAYCLPP VELSNR+LR Y+E ADRFLRVTFMDEG Q+LN+NVL YYVAPIV+++
Sbjct: 420 VITPTKAYCLPPGVELSNRVLRNYKEVADRFLRVTFMDEGMQKLNNNVLNYYVAPIVKEL 479
Query: 2111 TKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIK 1932
T NSFPQKT VF RV++IL DGF+LCGR+YSFLAFSSNQLRDRSAWFFAE +N V DI+
Sbjct: 480 TSNSFPQKTTVFRRVRSILIDGFHLCGRRYSFLAFSSNQLRDRSAWFFAEDSNTSVEDIR 539
Query: 1931 SWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPD 1752
WMGKF +KNVAKC ARMG CFSST+ATV+VP +QVN LPDIER GY+FSDGIGKITP+
Sbjct: 540 DWMGKFANKNVAKCAARMGQCFSSTYATVDVPPDQVNPLLPDIERKGYIFSDGIGKITPE 599
Query: 1751 LAKEVADKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEI 1572
LA EVA+KLQLT NPP AYQIR+AG KGVVA WP D RLS+RPSM KF+S HT+LE+
Sbjct: 600 LAMEVAEKLQLTENPPSAYQIRYAGTKGVVAVWPGDDDGIRLSLRPSMNKFESSHTMLEV 659
Query: 1571 VSWTRFQPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAE 1392
VSWTRFQPGFLNRQI+ LLS+L VPDSVF+ MQ +M++KL +L +TD+AFDVLTSSCAE
Sbjct: 660 VSWTRFQPGFLNRQIVTLLSSLNVPDSVFASMQDSMIYKLNQMLVDTDVAFDVLTSSCAE 719
Query: 1391 QGNTAAMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVL 1212
QGNTAA+ML AGFKPQTEPHL+ ML+ IR+ Q DLL K R FVP+GRWLMGC DELGVL
Sbjct: 720 QGNTAAIMLSAGFKPQTEPHLKAMLSCIRSAQLGDLLAKARXFVPKGRWLMGCLDELGVL 779
Query: 1211 EQGQCFIQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDN 1032
E GQCFIQSSIPSLENCF G FSG K + QVI GTV +AKNPCLHPGDIRILEAVD
Sbjct: 780 EHGQCFIQSSIPSLENCFMKHGSRFSGIKKNRQVIVGTVAIAKNPCLHPGDIRILEAVDV 839
Query: 1031 PGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGET 852
P LHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPP K+SWIPMDY+P +
Sbjct: 840 PSLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPGKKSWIPMDYTPAKP 899
Query: 851 QKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVD 672
+ R + DI+DFF+KNMVNE LG ICN+HVVHAD S+YGA+DEKC++LAELAATAVD
Sbjct: 900 KLEPRGVTPRDIIDFFLKNMVNENLGVICNAHVVHADCSEYGALDEKCLQLAELAATAVD 959
Query: 671 FPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTL 492
FPKTGK+V MP LKPK+YPDFMGK+D +SY+S+KVLG LYR IKD+ D+D +
Sbjct: 960 FPKTGKLVMMPPALKPKVYPDFMGKDDHMSYQSQKVLGILYRNIKDAT-----DNDVSSE 1014
Query: 491 AVFQVDDIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSM 312
+ +++PYD DL++PG++D++ +AW ++C YDGQLNALL Q+ V+SE EVVTGH+WS+
Sbjct: 1015 LLCTAEELPYDADLDIPGASDYLADAWXKQCSYDGQLNALLAQYRVRSEGEVVTGHIWSL 1074
Query: 311 PKYNNRXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVT 132
PKYN+R AY+++ +EF+R+F+N+G D Q LT+ EK YEQKASAWYQVT
Sbjct: 1075 PKYNSRKQGELKERLRNAYSALHKEFRRIFENMGPDFQQLTDDEKCLSYEQKASAWYQVT 1134
Query: 131 YHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRRD 3
Y PRW+KK E+ +D LSFAW+ A+YLVRIKIR D
Sbjct: 1135 YQPRWIKKLSEIEEADGDAVPARLSFAWIAADYLVRIKIRSGD 1177
>ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
gi|643724398|gb|KDP33599.1| hypothetical protein
JCGZ_07170 [Jatropha curcas]
Length = 1199
Score = 1575 bits (4078), Expect = 0.0
Identities = 768/1177 (65%), Positives = 905/1177 (76%), Gaps = 3/1177 (0%)
Frame = -1
Query: 3527 ERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITNT 3348
++ +KD ++TQVS GGFD V AK+L ++E+EIG WRCRLK SWTPPES NF+IT+
Sbjct: 4 QKSEKDTVVTQVSFGGFDNHVKAKDLVAYLEEEIGQVWRCRLKTSWTPPESYPNFEITDA 63
Query: 3347 RDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNTR 3168
+ ++++VEPHAFVHFAS +SAT + AG +L LN + L V+LGPE+ F +N R
Sbjct: 64 AAIHRTHEYKRVEPHAFVHFASAESATWAKNAAGHCELFLNDRPLKVSLGPENPFHLNQR 123
Query: 3167 RMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSFK 2988
R + PF V +EIGT VSRDEFL+GW+GP G DF +DPFDG+CK FT +TAFS K
Sbjct: 124 RRKNIPFKLSDVCIEIGTLVSRDEFLVGWRGPSSGVDFLVDPFDGTCKFCFTMDTAFSIK 183
Query: 2987 GTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVPF 2808
T+ HA+++CDFK EF VRDINEV+ Y D V+ LQL S+PL++YRTADDDI +VPF
Sbjct: 184 DTTKHAIIRCDFKLEFLVRDINEVKQYTDTSCIVILLQLASAPLVWYRTADDDIEVSVPF 243
Query: 2807 DLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIPYDCPAP- 2631
DLLDD+DPWIRTTDFT + IGRCN YR+ +PPR G KLK A +LK+ R+ P
Sbjct: 244 DLLDDDDPWIRTTDFTPSGAIGRCNFYRVSIPPRHGAKLKRARNFLKERRVQEDSLRRPL 303
Query: 2630 KFHEEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRSHDR 2451
K EPD+G PM DPFFC H KE I+FE++FLVNA +HKGIF+ QLSD FF+LLR+
Sbjct: 304 KIVNEPDYGMPMSDPFFCIHHKEGIAFEIMFLVNAVMHKGIFNQHQLSDNFFDLLRNQSL 363
Query: 2450 EVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKA 2271
++NVAAL +I S K PVFD + L+ VQ LLKNPK+ K K L D E+RRL +TPT+A
Sbjct: 364 DINVAALKHICSYKQPVFDAHKGLKAVQEWLLKNPKLFKRSKQLDDIVEIRRLALTPTRA 423
Query: 2270 YCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQ 2091
YCLPPEVELSNR+LRKY+ ADRFLRVTFMDEG Q +N+N LTYYVAPIVRD+T SF Q
Sbjct: 424 YCLPPEVELSNRVLRKYKNIADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTSFSQ 483
Query: 2090 KTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMGKFT 1911
KT +F RVK+IL DGF LCGR+YSFLAFSSNQLRDRSAWFFAE I V I+ WMG+FT
Sbjct: 484 KTRIFRRVKSILTDGFNLCGRRYSFLAFSSNQLRDRSAWFFAEDGKISVGQIRKWMGRFT 543
Query: 1910 DKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAD 1731
++N+AKC ARMG CFSST+ATVEVP +VN LPDIERNGY+FSDGIG ITPDLAKEVA+
Sbjct: 544 NRNIAKCAARMGQCFSSTYATVEVPSSEVNHALPDIERNGYIFSDGIGTITPDLAKEVAE 603
Query: 1730 KLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQ 1551
KL+L N PCAYQIR+AGCKGVVACWP + D RLS+RPSM KFQS HT LEI SWTRFQ
Sbjct: 604 KLKLDINLPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWTRFQ 663
Query: 1550 PGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNTAAM 1371
PGFLNRQII LLS L V D VF MQ MV KL +L + D+AFDV+T SCAEQGNTAA+
Sbjct: 664 PGFLNRQIITLLSTLNVSDEVFWEMQTAMVSKLNKMLTDADVAFDVITKSCAEQGNTAAI 723
Query: 1370 MLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFI 1191
ML AGFKPQ EPHLRGMLT IRA QF L EK RIFV GRWLMGC DELGVLEQGQCFI
Sbjct: 724 MLSAGFKPQNEPHLRGMLTCIRAAQFWGLREKARIFVTSGRWLMGCLDELGVLEQGQCFI 783
Query: 1190 QSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLV 1011
Q S P LE CFS G FS TK +LQVIKGTVV+AKNPCLHPGD+RILEAVD PGLHHL
Sbjct: 784 QVSNPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLH 843
Query: 1010 DCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQRAI 831
DCLVFPQKGDRPH NEASGSDLDGDLYFVTWD+NLIPPSK+SW PM Y E + L R +
Sbjct: 844 DCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPV 903
Query: 830 NQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKTGKV 651
+ DI+DFF KNMVNE LG ICN+HVVHADLS++GA+DE CIKLAELAATAVDFPKTGK+
Sbjct: 904 SHQDIIDFFAKNMVNENLGAICNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKL 963
Query: 650 VAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQV-- 477
V MP LKPKMYPDFMGKE++ SYKS K+LG LYR+I D+ GD D +
Sbjct: 964 VTMPPYLKPKMYPDFMGKEEYQSYKSTKILGRLYRQIIDA----YGDDDAAAFSELNCLS 1019
Query: 476 DDIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNN 297
DIPYD DLEV GSAD+I EAWD+KC YDGQL LL Q+ VK EEE+VTGH+WSMP N+
Sbjct: 1020 GDIPYDADLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKREEELVTGHIWSMPMSNS 1079
Query: 296 RXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRW 117
R +Y+++++EF++VF+ + D + LT+ EKN YE+KASAWYQV YHP+W
Sbjct: 1080 RKQGDLKERLKHSYSALKKEFRQVFEGMNLDVEQLTDDEKNLQYERKASAWYQVAYHPKW 1139
Query: 116 VKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRR 6
+KKS+EL+ SD MLSF+W+ A+YL RIKI+RR
Sbjct: 1140 IKKSLELQESDAPGNATMLSFSWIAADYLARIKIKRR 1176
>ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
guineensis]
Length = 1198
Score = 1574 bits (4076), Expect = 0.0
Identities = 772/1183 (65%), Positives = 920/1183 (77%), Gaps = 2/1183 (0%)
Frame = -1
Query: 3545 MGSLGF-ERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLL 3369
MGSLG ERD+K+L+++QVS GGFD+ V+AK+L F+E E G+ WRCR+K SWTPPES
Sbjct: 1 MGSLGAQERDQKELVVSQVSFGGFDERVSAKDLTDFMEHEAGLIWRCRVKNSWTPPESYP 60
Query: 3368 NFDITNTRDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPES 3189
NF++ + D+ DD KV PHAFVHFA+PD+A + AG+ +L LNG L N G +S
Sbjct: 61 NFNVLDVSDVLRKDDHPKVVPHAFVHFATPDAAKRAINAAGKCELILNGHPLRANSGIDS 120
Query: 3188 SFLMNTRRMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTK 3009
SF +N RR DPF F VGVEIGT SRDEFL+ WKGP G DF IDPFDG C+I F+K
Sbjct: 121 SFRINRRRTT-DPFRFVDVGVEIGTLASRDEFLVAWKGPKLGVDFLIDPFDGCCRILFSK 179
Query: 3008 ETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDD 2829
ETAF+FK AV+KCDFK EF VRDINEV+ + D+ VM QL S+P +YYRTADDD
Sbjct: 180 ETAFAFKDIKEMAVIKCDFKVEFLVRDINEVKLFTDRYPHVMLFQLSSTPWVYYRTADDD 239
Query: 2828 IHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIP 2649
IH T F LLDDEDPWIRTTDFT I R +SYR+ PR G+ L++++ YL++ RI
Sbjct: 240 IHVTASFSLLDDEDPWIRTTDFTPGGAISRSSSYRVSFSPRYGRILEKSLAYLRERRIAE 299
Query: 2648 YDCPAP-KFHEEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFE 2472
+ P EEP+FG+ MPDPFF KE ISF ++FLV+A +HKGI + QLS+ FF
Sbjct: 300 HWPKRPLAVREEPEFGTLMPDPFFSVQYKEGISFSIMFLVDALVHKGIVNQHQLSEEFFA 359
Query: 2471 LLRSHDREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRL 2292
LLRS VN AL +I++ KTP+FDP +RL+ VQ LLKNPK++KS K L DS EVRRL
Sbjct: 360 LLRSQSDAVNEIALRHIWAYKTPIFDPRKRLKLVQDWLLKNPKLLKSSKLLDDSTEVRRL 419
Query: 2291 IITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDM 2112
+ITPTKAYCLPPEVELSNR+LR Y++ ADRFLRVTFMDEG Q LN+NVL YYVAPIV+++
Sbjct: 420 VITPTKAYCLPPEVELSNRVLRNYKKVADRFLRVTFMDEGMQPLNNNVLNYYVAPIVKEL 479
Query: 2111 TKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIK 1932
T NSFPQKT VF RV+ IL DGF+LCGR+YSFLAFSSNQLRDRSAWFFAE +N V I+
Sbjct: 480 TSNSFPQKTTVFRRVRNILLDGFHLCGRRYSFLAFSSNQLRDRSAWFFAEDSNTSVMAIR 539
Query: 1931 SWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPD 1752
+WMGKF +KNVAKC ARMG CFSST+ATV+VP +Q N LPDIERNGYVFSDGIGKI P+
Sbjct: 540 NWMGKFANKNVAKCAARMGQCFSSTYATVDVPLDQFNPLLPDIERNGYVFSDGIGKIIPE 599
Query: 1751 LAKEVADKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEI 1572
LA EVA+KLQLT NPP AYQIR+AG KGVVA WP D RLS+RPSM KF+S HT+LE+
Sbjct: 600 LAIEVAEKLQLTENPPSAYQIRYAGFKGVVAVWPADDDGVRLSLRPSMNKFESSHTMLEV 659
Query: 1571 VSWTRFQPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAE 1392
VSWTRFQPGFLNRQI+ LLS+L V DSVF MQ +M++KL +L +TD+AFDVLTSSCAE
Sbjct: 660 VSWTRFQPGFLNRQIVTLLSSLNVADSVFESMQDSMIYKLNQMLVDTDVAFDVLTSSCAE 719
Query: 1391 QGNTAAMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVL 1212
QGNTAA+ML AGFKPQ EPHL+ ML+ IR+ Q DLL K RIFVP+GRWLMGC DELGVL
Sbjct: 720 QGNTAAIMLSAGFKPQMEPHLKAMLSCIRSAQLGDLLAKARIFVPKGRWLMGCLDELGVL 779
Query: 1211 EQGQCFIQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDN 1032
E GQCFIQSSIPSLENCF G FS K + QVI GTV +AKNPCLHPGDIRILEAVD
Sbjct: 780 EHGQCFIQSSIPSLENCFMKHGSRFSLLKKNRQVIVGTVAIAKNPCLHPGDIRILEAVDV 839
Query: 1031 PGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGET 852
P LHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSK+SWIPMDY+P E
Sbjct: 840 PSLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKKSWIPMDYTPAEP 899
Query: 851 QKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVD 672
+ RA+ DI+DFF+KNMVNE LG ICN+HVVHAD S+YGA+DE C++LAELAATAVD
Sbjct: 900 KLQPRAVTPRDIIDFFLKNMVNENLGVICNAHVVHADRSEYGALDENCLQLAELAATAVD 959
Query: 671 FPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTL 492
FPKTGK+V MP LKPK+YPDFMGK+D +SYKS+KVLG LYR IK D+D T
Sbjct: 960 FPKTGKLVTMPSGLKPKVYPDFMGKDDHMSYKSQKVLGRLYRNIK-----YAADNDVSTE 1014
Query: 491 AVFQVDDIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSM 312
+++PYDTDL++PG++ ++ +AW KC YDGQLNALL Q+ V+SE EVVTGH+WS+
Sbjct: 1015 LPCTAEELPYDTDLDIPGASYYLADAWQNKCSYDGQLNALLAQYRVRSEGEVVTGHIWSL 1074
Query: 311 PKYNNRXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVT 132
PKYN+R AY+++ +EF+R+F+++G D Q LT+ EK+ YEQ+ASAWYQVT
Sbjct: 1075 PKYNSRKQGELKERLKNAYSALHKEFRRIFEDMGPDFQQLTDDEKSVSYEQRASAWYQVT 1134
Query: 131 YHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRRD 3
YHPRW+K+S E++ D V LSFAWV A+YLVRIKI +D
Sbjct: 1135 YHPRWIKRSGEIKEPDGDVVPARLSFAWVAADYLVRIKISSQD 1177
>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
gi|731385864|ref|XP_010648660.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Vitis vinifera]
gi|731385866|ref|XP_010648661.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Vitis vinifera]
Length = 1197
Score = 1561 bits (4043), Expect = 0.0
Identities = 770/1179 (65%), Positives = 914/1179 (77%), Gaps = 5/1179 (0%)
Frame = -1
Query: 3527 ERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITNT 3348
E +KD+++TQ+S+GGFDQ VTA EL ++E IG RCRLK S TPPES +F+I +T
Sbjct: 4 EGSEKDMVVTQISIGGFDQYVTATELTYYLEDTIGSVDRCRLKTSSTPPESYPDFEIIDT 63
Query: 3347 RDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNTR 3168
++ +D++KVEPHAFVHF SP++AT D AG+++L L+GK L V+LGPE+ F +N R
Sbjct: 64 AKIERTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFHLNQR 123
Query: 3167 RMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSFK 2988
R PF F V +EIG VSRDE+ GW+GP G DF +DPFDG+CK FTK+TAFSFK
Sbjct: 124 RRTTFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTAFSFK 183
Query: 2987 GTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVPF 2808
G HAV+KC+FK EF VR+INEVR D S ++ LQL SSP +YYRTADDDI TVPF
Sbjct: 184 GMPKHAVIKCNFKVEFLVREINEVRQRRDMSSLILLLQLSSSPFVYYRTADDDIEETVPF 243
Query: 2807 DLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIPYDCPAPK 2628
DLLDD+DPWIRTTDFT + IGRCNSYRI +PPR G KLK+A++YL+ R+ + +PK
Sbjct: 244 DLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYLRARRVNVLE-DSPK 302
Query: 2627 FH----EEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRS 2460
+ +EPDFG PM DPFFC KE I F ++FLVNA +HKGI + QLSD+FF+LLRS
Sbjct: 303 WQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFFDLLRS 362
Query: 2459 HDREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITP 2280
+++N+AAL +I S + PVFD +RL+ V LLKNPK++KS K L D EVRRL+ITP
Sbjct: 363 QQKDINIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRRLVITP 422
Query: 2279 TKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNS 2100
+KAYCLPPEVELSNR+LR Y+E +DRFLRVTFMDEG Q +N+NVL YYVAPIV+ +T NS
Sbjct: 423 SKAYCLPPEVELSNRVLRNYKEVSDRFLRVTFMDEGMQTINANVLNYYVAPIVKVITSNS 482
Query: 2099 FPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMG 1920
FPQKT VF RVKTIL DGFYLCGRKYSFLAFSSNQLRDRSAWFFAE V IKSWMG
Sbjct: 483 FPQKTRVFKRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKKTSVRAIKSWMG 542
Query: 1919 KFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKE 1740
KFT++NVAKC ARMG CFSST+ATVEVP +V LPDI+RNGY FSDGIGKI PDLA E
Sbjct: 543 KFTNRNVAKCAARMGQCFSSTYATVEVPSWEVK-ELPDIKRNGYDFSDGIGKIVPDLAME 601
Query: 1739 VADKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWT 1560
VA+KL+L P AYQIR+AGCKGVVACWP D RLS RPSM KF S HT+LEI SWT
Sbjct: 602 VAEKLKL-EGTPSAYQIRYAGCKGVVACWPSDNDGIRLSWRPSMNKFLSDHTILEICSWT 660
Query: 1559 RFQPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNT 1380
RFQPGFLNRQI+ LLSAL VPD +F MQ +M+ KL +L +TD+AFDVL +SCAEQGNT
Sbjct: 661 RFQPGFLNRQIVTLLSALNVPDKIFWKMQESMISKLNQMLTDTDVAFDVLIASCAEQGNT 720
Query: 1379 AAMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQ 1200
AA+ML AGFKPQTEPHL+GMLT IRA QF L EK RIFVP GRWLMGC DELGVLEQGQ
Sbjct: 721 AAIMLSAGFKPQTEPHLQGMLTCIRAAQFWGLREKARIFVPSGRWLMGCLDELGVLEQGQ 780
Query: 1199 CFIQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLH 1020
CFIQ S PSLENCF G FS K +L+VIKG V +AKNPCLHPGD+RILEAVD PGL
Sbjct: 781 CFIQVSSPSLENCFLKHGSRFSAQK-NLKVIKGIVAIAKNPCLHPGDVRILEAVDAPGLE 839
Query: 1019 HLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQ 840
HLVDCLVFPQKGDRPH+NEASGSDLDGDLYFVTW+E LIPPSK+SW PM Y E + L
Sbjct: 840 HLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWEETLIPPSKQSWPPMQYDSAEAKALA 899
Query: 839 RAINQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKT 660
R + DI+DFF KNMVNE LG ICN+HVVHAD S+YGA+DE C+ LAE AATAVDFPKT
Sbjct: 900 REVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAERAATAVDFPKT 959
Query: 659 GKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQ 480
GK+V +P LKPKMYPDFMGKE+F +Y+S K+LG++YR+IKD+ + V +S + +F
Sbjct: 960 GKLVTLPPYLKPKMYPDFMGKEEFQTYRSNKILGKMYRQIKDAYNEDVSESSEQ---IFG 1016
Query: 479 VDDIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYN 300
D +P+D DL +PGSADFI +AW KC YDGQLN LL Q+ VK EEEVVTGHVWSMPKY
Sbjct: 1017 ADKVPFDEDLGIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREEEVVTGHVWSMPKYK 1076
Query: 299 NRXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPR 120
+R AY+S+++EF+++F+ + D LT+ EKN +YEQKASAWYQVTYHP
Sbjct: 1077 SRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPT 1136
Query: 119 WVKKSVELRNSDDKVA-TPMLSFAWVPAEYLVRIKIRRR 6
WVKKS+EL+N D+ MLSFAW+ A+YL RIKIRR+
Sbjct: 1137 WVKKSLELQNPDEVFGERVMLSFAWITADYLARIKIRRK 1175
>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
6 [Theobroma cacao]
Length = 1197
Score = 1558 bits (4035), Expect = 0.0
Identities = 757/1170 (64%), Positives = 911/1170 (77%), Gaps = 1/1170 (0%)
Frame = -1
Query: 3518 KKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITNTRDL 3339
+KD ++TQVS+GGF + V AK+L ++ + E+G+ WRCRLK SWTPPES NF+I ++ +
Sbjct: 7 EKDTVVTQVSVGGFGRHVAAKDLMEYFDNEVGVVWRCRLKTSWTPPESYPNFEILDSTVI 66
Query: 3338 KLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNTRRME 3159
+ DD++KVEPHAFVHFASP +AT D AGR +L N ++L V+LGPE+ + +N RR
Sbjct: 67 QRTDDYKKVEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENPYYLNRRRRN 126
Query: 3158 IDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSFKGTS 2979
PF V ++IG VSRDEF +GW+GPP G DF +DPFDG+CK F+++TAFSFKGT+
Sbjct: 127 TTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTAFSFKGTT 186
Query: 2978 LHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVPFDLL 2799
+AV+KCDFK EF VRDINE++ Y + V+ LQL SSP ++YRTADD+I +VPFDLL
Sbjct: 187 EYAVIKCDFKVEFLVRDINEIKQYTEPSGLVVFLQLASSPRVWYRTADDEIEESVPFDLL 246
Query: 2798 DDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRI-IPYDCPAPKFH 2622
DD+D WIRTTDFT + IGRCN+YR+ + PR G KLK+A++YL++ R+ + Y +
Sbjct: 247 DDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVPMDYVRWPLRIS 306
Query: 2621 EEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRSHDREVN 2442
+EPDFG M DPF+C KE I FE++FLVNA +HKGIF+ QLS+ FF LLR REVN
Sbjct: 307 DEPDFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFNQHQLSEDFFNLLRDQPREVN 366
Query: 2441 VAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCL 2262
VAAL +IYS + PVFD +RL+TV LL+NP + KS K L D E+RRL+ITPTKA+CL
Sbjct: 367 VAALKHIYSYRRPVFDAYKRLKTVHDWLLRNPILFKSPKQLDDIVEIRRLVITPTKAHCL 426
Query: 2261 PPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTL 2082
PEVELSNR+LRKY+E ADRFLRVTFMDEG Q +N+NVLTYY A IVRD+T F QKT
Sbjct: 427 LPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTYYAASIVRDVTSTFFSQKTG 486
Query: 2081 VFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMGKFTDKN 1902
VF RV++IL DGFYLCGRKYSFLAFS+NQLRD SAWFFAE V I WMGKFT++N
Sbjct: 487 VFKRVRSILTDGFYLCGRKYSFLAFSANQLRDSSAWFFAEDGKTSVLQILRWMGKFTNRN 546
Query: 1901 VAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKEVADKLQ 1722
+AKC ARMG CFSST+ATVEVP +VN LPDIERNGYVFSDGIGKITPDLAKEVA KL+
Sbjct: 547 IAKCAARMGQCFSSTYATVEVPSTEVNPFLPDIERNGYVFSDGIGKITPDLAKEVAQKLK 606
Query: 1721 LTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGF 1542
L NPPCAYQIR+AGCKGVVACWPE+ D RLS+R SM KF S HT LEI SWTRFQPGF
Sbjct: 607 LDLNPPCAYQIRYAGCKGVVACWPEEGDGVRLSLRCSMNKFFSDHTTLEICSWTRFQPGF 666
Query: 1541 LNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNTAAMMLG 1362
LNRQII LLS VPD VF MQ TMV KL IL +TD+AF+VLTSSC+EQGN AA+ML
Sbjct: 667 LNRQIITLLSTQYVPDEVFWEMQNTMVSKLNKILVDTDVAFEVLTSSCSEQGNAAAIMLS 726
Query: 1361 AGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSS 1182
AGFKPQTEPHLRG+LT +RA Q L EK RIFVP GRWLMG DELGVLEQGQCFIQ S
Sbjct: 727 AGFKPQTEPHLRGILTCVRASQLCGLREKARIFVPSGRWLMGVLDELGVLEQGQCFIQVS 786
Query: 1181 IPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCL 1002
PS+ENCF G F+ TK + +VI+G VV+AKNPCLHPGDIRILEAVD PGLHHL DCL
Sbjct: 787 NPSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCL 846
Query: 1001 VFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQRAINQS 822
VFPQKG+RPH NEASGSDLDGDLYFVTW++ LIPP K+SW PM Y PGET+++QR +N
Sbjct: 847 VFPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDPGETKEIQREVNHK 906
Query: 821 DIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAM 642
DI+DFF KNMVNE LGTICN+HVVHADLS+YGA+DEKCI LAELAATAVDFPKTGK+V+M
Sbjct: 907 DIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATAVDFPKTGKIVSM 966
Query: 641 PQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQVDDIPY 462
P LKPK+YPDFMGKE++ SYKS+K+LG LYR IKD D + +S + L DI Y
Sbjct: 967 PANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDVYDEDLSESSEINL---DSPDINY 1023
Query: 461 DTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXX 282
DTDLEV GSAD+I +AW +KC YD QL LL Q+ VK EEEVVTGH+WSMPKY +R
Sbjct: 1024 DTDLEVTGSADYIDDAWVKKCSYDRQLIGLLGQYKVKREEEVVTGHIWSMPKYTSRKLGD 1083
Query: 281 XXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSV 102
+Y ++R+EF+++F+++ + + L E E+N +YE+KASAWYQVTYHP+WV+K +
Sbjct: 1084 LKEKLGHSYGALRKEFRQIFESMDSEIEQLNEDERNELYERKASAWYQVTYHPKWVEKKL 1143
Query: 101 ELRNSDDKVATPMLSFAWVPAEYLVRIKIR 12
EL+ SD MLSFAW+ A+YL RIKIR
Sbjct: 1144 ELQKSDGADPVVMLSFAWIAADYLARIKIR 1173
>ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [Prunus mume]
Length = 1196
Score = 1551 bits (4017), Expect = 0.0
Identities = 759/1178 (64%), Positives = 906/1178 (76%), Gaps = 3/1178 (0%)
Frame = -1
Query: 3530 FERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITN 3351
FE + ++TQVS GGF V AK+L ++E EIG+ +RCRLK SWTPPES NF+I N
Sbjct: 3 FEGSENGSVVTQVSFGGFQHHVRAKDLVTYLEDEIGVVYRCRLKTSWTPPESFPNFEI-N 61
Query: 3350 TRDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNT 3171
T D+K DD+ +VEPHAFVHF SPDS T D AGR +L LN + L V++G E+ + +N
Sbjct: 62 TADVKRTDDYSRVEPHAFVHFVSPDSVTFAMDAAGRCELFLNNEPLKVSMGLENPYFLNR 121
Query: 3170 RRMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSF 2991
RR PF V VEIG+ V +DEF + W+GPP G DF +DPFDG+CK FT +TAFSF
Sbjct: 122 RRRTKTPFKLSDVHVEIGSLVRQDEFFVSWRGPPYGVDFIVDPFDGTCKFCFTMDTAFSF 181
Query: 2990 KGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVP 2811
KGT HAV+KCDFK EF VR+I E++ Y D V+ L+L SSP + YRTADDDI +VP
Sbjct: 182 KGTKKHAVIKCDFKVEFLVREIAEIKQYTDTSYLVILLRLTSSPWVSYRTADDDIDQSVP 241
Query: 2810 FDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRI--IPYDCP 2637
FDLLDD+DPWIRTTDFT + IGRCNSYR+ +PPR G KLK+A+ YL++ R+ + P
Sbjct: 242 FDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYLRERRVKEVCIKWP 301
Query: 2636 APKFHEEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRSH 2457
P+ +EPDFG +PFF +E ISFE++FLVNA +HKG + QLSD FF LLRS
Sbjct: 302 -PRIQDEPDFGMSNTEPFFSIQYEEDISFEIMFLVNAVMHKGTVNQHQLSDSFFHLLRSQ 360
Query: 2456 DREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITPT 2277
+E+NVAAL ++ S + PVFD ERL+ VQ LLKNPK++K K L D EVRRL+ITPT
Sbjct: 361 PKEINVAALKHLCSYRNPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIVEVRRLVITPT 420
Query: 2276 KAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSF 2097
KAYCLPPEVELSNR+LRKY+E ADRFLRVTFMDEG Q++NSNVL YYVAPIV+++T NSF
Sbjct: 421 KAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYYVAPIVKEITSNSF 480
Query: 2096 PQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMGK 1917
QKT VF R + IL DGFYLCGRKY+FLAFSSNQLRDRSAWFFAE NI V I SWMGK
Sbjct: 481 LQKTNVFKRFRNILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECVNISVGKITSWMGK 540
Query: 1916 FTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKEV 1737
F +KNVAKC ARMG CFSST+ATVEVP +VN ++PDIERNGY+FSDGIG ITPDLA EV
Sbjct: 541 FNNKNVAKCAARMGQCFSSTYATVEVPSSEVN-DIPDIERNGYIFSDGIGMITPDLALEV 599
Query: 1736 ADKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTR 1557
A+KL+L NPPCAYQIRFAGCKGVVACWP K D FRLS+R SM KF+SKH LEI SWTR
Sbjct: 600 AEKLKLDRNPPCAYQIRFAGCKGVVACWPSKGDRFRLSLRTSMNKFESKHATLEICSWTR 659
Query: 1556 FQPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNTA 1377
+QPGFLNRQII LLS L V D +F MQ MV KL +L +TD+AFDVLTSSCAEQGN A
Sbjct: 660 YQPGFLNRQIITLLSTLKVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTSSCAEQGNAA 719
Query: 1376 AMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQC 1197
A+ML AGFKPQTEPHLRGMLT I+A Q L EK RIFV GRWLMG DELGVLEQGQC
Sbjct: 720 AIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKARIFVHSGRWLMGVLDELGVLEQGQC 779
Query: 1196 FIQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLHH 1017
F+Q S PSLE+CF+ G F+ + +LQVIKG VV+AKNPCLHPGDIRILEAVD PGLHH
Sbjct: 780 FVQVSTPSLESCFAKHGSSFAQIERNLQVIKGYVVIAKNPCLHPGDIRILEAVDAPGLHH 839
Query: 1016 LVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQR 837
L DCLVFPQKGDRPH +EASGSDLDGDLYFVTWDENLIPPSK+SW+PM Y P E ++ R
Sbjct: 840 LYDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKRQGR 899
Query: 836 AINQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKTG 657
+ Q DI+DFFVKNM NE LG ICN+HVVHAD SDYGA+DE C+KLAELAA AVDFPKTG
Sbjct: 900 PVTQQDIIDFFVKNMTNENLGPICNAHVVHADRSDYGALDENCLKLAELAALAVDFPKTG 959
Query: 656 KVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQV 477
K+V +PQ LKP++YPDF+GKED SYKS K+LG LYR+++D+ D D+ + +
Sbjct: 960 KIVTLPQHLKPRLYPDFLGKEDNQSYKSTKILGRLYRKVRDAYD---EDAATTSELHYVP 1016
Query: 476 DDIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNN 297
DIPYD DLEVPG+ADFI +AW++KC YDGQL L+ Q+ VK EEE+VTGHVWS+PK N+
Sbjct: 1017 SDIPYDMDLEVPGAADFIFDAWEKKCSYDGQLKGLMGQYKVKREEEIVTGHVWSIPKSNS 1076
Query: 296 RXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRW 117
+ +YN++++EF+++F+NL + + LT+ EKN + E+KASAWYQVTYHP+W
Sbjct: 1077 KKQGELKERLSHSYNALKKEFRQMFENLDSNLEALTDDEKNILCEKKASAWYQVTYHPKW 1136
Query: 116 VKKSVELRNSDDK-VATPMLSFAWVPAEYLVRIKIRRR 6
VK+S L+ D MLSFAW+ A+YL RIKI+ R
Sbjct: 1137 VKQSPPLQEPDGPGDVVVMLSFAWIAADYLARIKIKCR 1174
>ref|XP_004291459.2| PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Fragaria vesca
subsp. vesca]
Length = 1200
Score = 1546 bits (4004), Expect = 0.0
Identities = 749/1182 (63%), Positives = 906/1182 (76%), Gaps = 1/1182 (0%)
Frame = -1
Query: 3545 MGSLGFERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLN 3366
MG + E + D ++TQVS GGF VTAKEL ++E EIG+ +RCRLK SWTPPES+ N
Sbjct: 1 MGKMELEERENDTVVTQVSFGGFGSHVTAKELVSYLEDEIGLVFRCRLKTSWTPPESVPN 60
Query: 3365 FDITNTRDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESS 3186
F+I++ D++ DD+ KVEPHAFVHFASP+S T++ D GR QL N + L +LGPE+
Sbjct: 61 FEISDAADIETTDDYRKVEPHAFVHFASPESVTAVMDAVGRCQLFFNNQALKASLGPENL 120
Query: 3185 FLMNTRRMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKE 3006
F MN RR PF V +EIG+ V DEF + WKGP G DF +DPFDG+CK F ++
Sbjct: 121 FNMNKRRRTKIPFKLADVRLEIGSLVRLDEFFVAWKGPDHGVDFVVDPFDGTCKFCFRRD 180
Query: 3005 TAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDI 2826
TAFSFKG + HAV+ CDFK EF VR+I E + Y + L V+ L+LVSSP + YRTADDDI
Sbjct: 181 TAFSFKGLNKHAVITCDFKAEFQVREIGEFKHYTEPLYHVLLLRLVSSPWVSYRTADDDI 240
Query: 2825 HATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIP- 2649
+V FDLLDD+DPWIRTTDFT IGRCN YR+ +PPR G KLK+A+ YLK+ R+
Sbjct: 241 DQSVLFDLLDDDDPWIRTTDFTPTGAIGRCNYYRVLIPPRHGAKLKKAMIYLKERRVQEL 300
Query: 2648 YDCPAPKFHEEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFEL 2469
+ P+ +EP FG+PM D F H ++ ISF++LFLVNA +HKGI + QLS+ FF+L
Sbjct: 301 FIKKPPRIQDEPGFGNPMSDALFSIHYQKNISFDILFLVNAVMHKGILNQHQLSESFFDL 360
Query: 2468 LRSHDREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLI 2289
LR+ E+NVAAL ++ S K PVFD ++RL+ VQ LL+NPK+IK+ K L D AEVRRL+
Sbjct: 361 LRNQPEEINVAALKHLCSYKHPVFDASKRLKLVQEWLLRNPKLIKNPKRLDDIAEVRRLV 420
Query: 2288 ITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMT 2109
ITPTKAYCLPPEVELSNR+LRKY+E ADRFLRVTFMDEG Q +NSNV+ YVAPIV+++T
Sbjct: 421 ITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTMNSNVMNSYVAPIVKEIT 480
Query: 2108 KNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKS 1929
+N+FPQKT V+ R++ IL +GF+LCGRKYSFLAFSSNQLRDRSAWFFAE I + IK+
Sbjct: 481 ENTFPQKTKVYVRIRAILMNGFHLCGRKYSFLAFSSNQLRDRSAWFFAEDKTISIQGIKN 540
Query: 1928 WMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDL 1749
WMG+FT++NVAKC ARMG CFSST+ATVEVP QVN LPDIERNGYVFSDGIG+ITPDL
Sbjct: 541 WMGRFTNRNVAKCAARMGQCFSSTYATVEVPSTQVNHELPDIERNGYVFSDGIGRITPDL 600
Query: 1748 AKEVADKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIV 1569
A EVA+KL+L +PP AYQIR+ GCKGVVACWP D FRLS+R SM KF S HT LEI
Sbjct: 601 AMEVAEKLKLDRDPPSAYQIRYGGCKGVVACWPSTGDGFRLSLRRSMNKFASDHTTLEIC 660
Query: 1568 SWTRFQPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQ 1389
SWTR QPGFLNRQII LLSAL VPD +F MQ TMV KL +L +TD+AFDVLT+SCAEQ
Sbjct: 661 SWTRLQPGFLNRQIITLLSALNVPDEIFWTMQETMVSKLKQMLVDTDVAFDVLTASCAEQ 720
Query: 1388 GNTAAMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLE 1209
GN+AA+ML AGFKPQTEPHLRGMLT I+A Q L EKTRIFVP GRWLMGC DELGVLE
Sbjct: 721 GNSAAIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKTRIFVPSGRWLMGCLDELGVLE 780
Query: 1208 QGQCFIQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNP 1029
QGQCF+Q S PSLENCF+ G F T +LQVIKG VVVAKNPCLHPGDIRILEAVD P
Sbjct: 781 QGQCFVQVSTPSLENCFAKHGSRFDQTDKNLQVIKGFVVVAKNPCLHPGDIRILEAVDAP 840
Query: 1028 GLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQ 849
GLHHL DCLVFPQKG RPH +EASGSDLDGDLYFVTWDENLIPP K+SW PM+Y P E +
Sbjct: 841 GLHHLHDCLVFPQKGHRPHTDEASGSDLDGDLYFVTWDENLIPPRKKSWQPMEYEPAEAK 900
Query: 848 KLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDF 669
R++ D+++FFV+NMVNE LG ICN+HVVH+D S+YGA DE C+KLAELAA AVDF
Sbjct: 901 LSGRSVTSQDLIEFFVRNMVNENLGAICNAHVVHSDRSEYGAFDENCLKLAELAAVAVDF 960
Query: 668 PKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLA 489
PKTGK+V MP LKPK+YPDFMGK+D+ SYKS K+LG LYR+I D+ D V +S +
Sbjct: 961 PKTGKIVTMPPHLKPKLYPDFMGKQDYQSYKSNKILGRLYRKICDAYDEDVANSSEQN-- 1018
Query: 488 VFQVDDIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMP 309
D+ YD DLEVP +ADFI +AW+RKC YD QL L+ Q+ + EEE+VTGHVWSMP
Sbjct: 1019 -HVPSDVKYDMDLEVPKAADFIADAWERKCSYDSQLRGLMTQYKIMREEEIVTGHVWSMP 1077
Query: 308 KYNNRXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTY 129
KY +R +Y+++++EF++ F+ + ++L + +KN+ YEQKASAWYQVTY
Sbjct: 1078 KYTSRKQGELQERLKHSYSALKKEFRQFFEKMDTGFESLIDDQKNSFYEQKASAWYQVTY 1137
Query: 128 HPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRRD 3
HP WVKKS++L D MLSFAW+ A+YL RIKI+RR+
Sbjct: 1138 HPDWVKKSLDLHGPDGPGDVVMLSFAWIAADYLARIKIKRRE 1179
>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
gi|462422376|gb|EMJ26639.1| hypothetical protein
PRUPE_ppa000422mg [Prunus persica]
Length = 1196
Score = 1545 bits (4000), Expect = 0.0
Identities = 757/1176 (64%), Positives = 904/1176 (76%), Gaps = 3/1176 (0%)
Frame = -1
Query: 3530 FERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITN 3351
FE + ++TQVS GGF AK+L ++E EIG+ +RCRLK SWTPPES NF+I N
Sbjct: 3 FEGSENGSVVTQVSFGGFQHHARAKDLVTYLEDEIGLVYRCRLKTSWTPPESFPNFEI-N 61
Query: 3350 TRDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNT 3171
T D+K DD+ +VEPHAFVHF SPDS T D AGR +L N + L V+LGPE+ + +N
Sbjct: 62 TADVKRTDDYSRVEPHAFVHFVSPDSVTFAMDAAGRCELFFNNEPLKVSLGPENPYFLNR 121
Query: 3170 RRMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSF 2991
RR PF V VEIG+ V +DEF W+GPP G DF +DPFDG+CK FT +TAFSF
Sbjct: 122 RRRTKTPFKLSDVHVEIGSLVRQDEFFASWRGPPYGVDFIVDPFDGTCKFCFTMDTAFSF 181
Query: 2990 KGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVP 2811
KGT HAV+KCDFK EF VR+I E++ Y D V+ L+L SSP + YRTADDDI +VP
Sbjct: 182 KGTKKHAVIKCDFKVEFLVREIAEIKQYTDTSYLVILLRLTSSPWVSYRTADDDIDQSVP 241
Query: 2810 FDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRI--IPYDCP 2637
FDLLDD+DPWIRTTDFT + IGRCNSYR+ +PPR G KLK+A+ YL++ R+ + P
Sbjct: 242 FDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYLRERRVKEVCIKWP 301
Query: 2636 APKFHEEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRSH 2457
PK +EPDFG +PFF +E ISFE++FLVNA +HKG + QLSD FF LLRS
Sbjct: 302 -PKIQDEPDFGMSNTEPFFSIQYEEGISFEIMFLVNAVMHKGTVNQHQLSDSFFHLLRSQ 360
Query: 2456 DREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITPT 2277
+E+NVAAL ++ S ++PVFD ERL+ VQ LLKNPK++K K L D AEVRRL+ITPT
Sbjct: 361 PKEINVAALKHLCSYRSPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIAEVRRLVITPT 420
Query: 2276 KAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSF 2097
KAYCLPPEVELSNR+LRKY+E ADRFLRVTFMDEG Q++NSNVL YYVAPIV+++T NSF
Sbjct: 421 KAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYYVAPIVKEITSNSF 480
Query: 2096 PQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMGK 1917
QKT VF R +TIL DGFYLCGRKY+FLAFSSNQLRDRSAWFFAE NI V I SWMGK
Sbjct: 481 LQKTNVFKRFRTILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECVNISVGKITSWMGK 540
Query: 1916 FTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKEV 1737
F +KNVAKC ARMG CFSST+ATVEV +VN ++PDI+RNGYVFSDGIG ITPDLA EV
Sbjct: 541 FNNKNVAKCAARMGQCFSSTYATVEVTSSEVN-DIPDIKRNGYVFSDGIGMITPDLALEV 599
Query: 1736 ADKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTR 1557
A+KL+L NPPCAYQIRFAGCKGVVACWP K D FRLS+R SM KF+SKHT LEI SWTR
Sbjct: 600 AEKLKLDRNPPCAYQIRFAGCKGVVACWPSKGDGFRLSLRTSMNKFESKHTTLEICSWTR 659
Query: 1556 FQPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNTA 1377
+QPGFLNRQII LLS L V D +F MQ MV KL +L +TD+AFDVLT+SCAEQGN A
Sbjct: 660 YQPGFLNRQIITLLSTLNVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTASCAEQGNAA 719
Query: 1376 AMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQC 1197
A+ML AGFKPQTEPHLRGMLT I+A Q L EK RIFV GRWLMG DELGVLEQGQC
Sbjct: 720 AIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKARIFVHSGRWLMGVLDELGVLEQGQC 779
Query: 1196 FIQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLHH 1017
F+Q S P LE+CF+ G F+ + +LQVIKG VV+AKNPCLHPGDIRILEAVD PGLHH
Sbjct: 780 FVQVSTPLLESCFAKHGSSFAQIERNLQVIKGHVVIAKNPCLHPGDIRILEAVDAPGLHH 839
Query: 1016 LVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQR 837
L DCLVFPQKGDRPH +EASGSDLDGDLYFVTWDENLIPPSK+SW+PM Y P E + R
Sbjct: 840 LYDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKLQGR 899
Query: 836 AINQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKTG 657
+ Q DI+DFFVKNM NE LG ICN+HVVHAD SDYGA+D C+KLAELAA AVDFPKTG
Sbjct: 900 PVTQQDIIDFFVKNMTNENLGPICNAHVVHADRSDYGALDVNCLKLAELAALAVDFPKTG 959
Query: 656 KVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQV 477
K+V++PQ LKP++YPDF+GKED SYKS K+LG LYR+++D+ D D+ + +
Sbjct: 960 KIVSLPQHLKPRLYPDFLGKEDNQSYKSTKILGRLYRKVRDAYD---EDAATSSELHYFP 1016
Query: 476 DDIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNN 297
DIPYD DLEVPG+ADF+ +AW++KC YDGQL L+ Q+ VK EEE+VTGHVWS+PK N+
Sbjct: 1017 SDIPYDMDLEVPGAADFVFDAWEKKCSYDGQLKGLMGQYKVKREEEIVTGHVWSIPKSNS 1076
Query: 296 RXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRW 117
+ +YN++++EF+++F+NL + + LT+ EKN + E+KASAWYQVTYHP+W
Sbjct: 1077 KKQGELKERLSHSYNALKKEFRQMFENLDSNLEALTDDEKNLLCEKKASAWYQVTYHPKW 1136
Query: 116 VKKSVELRNSDDK-VATPMLSFAWVPAEYLVRIKIR 12
VK+S L+ D MLSFAW+ A+YL RIKI+
Sbjct: 1137 VKQSPPLQEPDGPGDVVVMLSFAWIAADYLARIKIK 1172
>ref|XP_011459183.1| PREDICTED: RNA-dependent RNA polymerase 6 isoform X2 [Fragaria vesca
subsp. vesca]
Length = 1197
Score = 1542 bits (3993), Expect = 0.0
Identities = 747/1176 (63%), Positives = 903/1176 (76%), Gaps = 1/1176 (0%)
Frame = -1
Query: 3527 ERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITNT 3348
E + D ++TQVS GGF VTAKEL ++E EIG+ +RCRLK SWTPPES+ NF+I++
Sbjct: 4 EERENDTVVTQVSFGGFGSHVTAKELVSYLEDEIGLVFRCRLKTSWTPPESVPNFEISDA 63
Query: 3347 RDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNTR 3168
D++ DD+ KVEPHAFVHFASP+S T++ D GR QL N + L +LGPE+ F MN R
Sbjct: 64 ADIETTDDYRKVEPHAFVHFASPESVTAVMDAVGRCQLFFNNQALKASLGPENLFNMNKR 123
Query: 3167 RMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSFK 2988
R PF V +EIG+ V DEF + WKGP G DF +DPFDG+CK F ++TAFSFK
Sbjct: 124 RRTKIPFKLADVRLEIGSLVRLDEFFVAWKGPDHGVDFVVDPFDGTCKFCFRRDTAFSFK 183
Query: 2987 GTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVPF 2808
G + HAV+ CDFK EF VR+I E + Y + L V+ L+LVSSP + YRTADDDI +V F
Sbjct: 184 GLNKHAVITCDFKAEFQVREIGEFKHYTEPLYHVLLLRLVSSPWVSYRTADDDIDQSVLF 243
Query: 2807 DLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIP-YDCPAP 2631
DLLDD+DPWIRTTDFT IGRCN YR+ +PPR G KLK+A+ YLK+ R+ + P
Sbjct: 244 DLLDDDDPWIRTTDFTPTGAIGRCNYYRVLIPPRHGAKLKKAMIYLKERRVQELFIKKPP 303
Query: 2630 KFHEEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRSHDR 2451
+ +EP FG+PM D F H ++ ISF++LFLVNA +HKGI + QLS+ FF+LLR+
Sbjct: 304 RIQDEPGFGNPMSDALFSIHYQKNISFDILFLVNAVMHKGILNQHQLSESFFDLLRNQPE 363
Query: 2450 EVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKA 2271
E+NVAAL ++ S K PVFD ++RL+ VQ LL+NPK+IK+ K L D AEVRRL+ITPTKA
Sbjct: 364 EINVAALKHLCSYKHPVFDASKRLKLVQEWLLRNPKLIKNPKRLDDIAEVRRLVITPTKA 423
Query: 2270 YCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQ 2091
YCLPPEVELSNR+LRKY+E ADRFLRVTFMDEG Q +NSNV+ YVAPIV+++T+N+FPQ
Sbjct: 424 YCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTMNSNVMNSYVAPIVKEITENTFPQ 483
Query: 2090 KTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMGKFT 1911
KT V+ R++ IL +GF+LCGRKYSFLAFSSNQLRDRSAWFFAE I + IK+WMG+FT
Sbjct: 484 KTKVYVRIRAILMNGFHLCGRKYSFLAFSSNQLRDRSAWFFAEDKTISIQGIKNWMGRFT 543
Query: 1910 DKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAD 1731
++NVAKC ARMG CFSST+ATVEVP QVN LPDIERNGYVFSDGIG+ITPDLA EVA+
Sbjct: 544 NRNVAKCAARMGQCFSSTYATVEVPSTQVNHELPDIERNGYVFSDGIGRITPDLAMEVAE 603
Query: 1730 KLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQ 1551
KL+L +PP AYQIR+ GCKGVVACWP D FRLS+R SM KF S HT LEI SWTR Q
Sbjct: 604 KLKLDRDPPSAYQIRYGGCKGVVACWPSTGDGFRLSLRRSMNKFASDHTTLEICSWTRLQ 663
Query: 1550 PGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNTAAM 1371
PGFLNRQII LLSAL VPD +F MQ TMV KL +L +TD+AFDVLT+SCAEQGN+AA+
Sbjct: 664 PGFLNRQIITLLSALNVPDEIFWTMQETMVSKLKQMLVDTDVAFDVLTASCAEQGNSAAI 723
Query: 1370 MLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFI 1191
ML AGFKPQTEPHLRGMLT I+A Q L EKTRIFVP GRWLMGC DELGVLEQGQCF+
Sbjct: 724 MLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEQGQCFV 783
Query: 1190 QSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLV 1011
Q S PSLENCF+ G F T +LQVIKG VVVAKNPCLHPGDIRILEAVD PGLHHL
Sbjct: 784 QVSTPSLENCFAKHGSRFDQTDKNLQVIKGFVVVAKNPCLHPGDIRILEAVDAPGLHHLH 843
Query: 1010 DCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQRAI 831
DCLVFPQKG RPH +EASGSDLDGDLYFVTWDENLIPP K+SW PM+Y P E + R++
Sbjct: 844 DCLVFPQKGHRPHTDEASGSDLDGDLYFVTWDENLIPPRKKSWQPMEYEPAEAKLSGRSV 903
Query: 830 NQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKTGKV 651
D+++FFV+NMVNE LG ICN+HVVH+D S+YGA DE C+KLAELAA AVDFPKTGK+
Sbjct: 904 TSQDLIEFFVRNMVNENLGAICNAHVVHSDRSEYGAFDENCLKLAELAAVAVDFPKTGKI 963
Query: 650 VAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQVDD 471
V MP LKPK+YPDFMGK+D+ SYKS K+LG LYR+I D+ D V +S + D
Sbjct: 964 VTMPPHLKPKLYPDFMGKQDYQSYKSNKILGRLYRKICDAYDEDVANSSEQN---HVPSD 1020
Query: 470 IPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRX 291
+ YD DLEVP +ADFI +AW+RKC YD QL L+ Q+ + EEE+VTGHVWSMPKY +R
Sbjct: 1021 VKYDMDLEVPKAADFIADAWERKCSYDSQLRGLMTQYKIMREEEIVTGHVWSMPKYTSRK 1080
Query: 290 XXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVK 111
+Y+++++EF++ F+ + ++L + +KN+ YEQKASAWYQVTYHP WVK
Sbjct: 1081 QGELQERLKHSYSALKKEFRQFFEKMDTGFESLIDDQKNSFYEQKASAWYQVTYHPDWVK 1140
Query: 110 KSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRRD 3
KS++L D MLSFAW+ A+YL RIKI+RR+
Sbjct: 1141 KSLDLHGPDGPGDVVMLSFAWIAADYLARIKIKRRE 1176
>ref|XP_010048973.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Eucalyptus grandis]
gi|629116728|gb|KCW81403.1| hypothetical protein
EUGRSUZ_C02780 [Eucalyptus grandis]
Length = 1195
Score = 1529 bits (3959), Expect = 0.0
Identities = 740/1172 (63%), Positives = 913/1172 (77%), Gaps = 2/1172 (0%)
Frame = -1
Query: 3515 KDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITNTRDLK 3336
KD ++TQ+ +GGFD +VTAKEL +++E +G+ WRCRLK SWTPPES +F++T+ ++
Sbjct: 8 KDTVVTQIGVGGFDPNVTAKELVEYLEDTVGLIWRCRLKTSWTPPESYPDFEVTSFDTIQ 67
Query: 3335 LNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNTRRMEI 3156
+ D++ KVEPHAFVHFA P++A+S ++ + N L LN K L VNLGPE+ F MN RR
Sbjct: 68 IVDEYRKVEPHAFVHFALPEAASSAYELSQNNGLFLNNKPLKVNLGPENPFHMNQRRRTT 127
Query: 3155 DPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSFKGTSL 2976
P+ V +EIGT ++ +EFL+ W+GP G DFF+DPFD C+ FT++TAFSFK S
Sbjct: 128 TPYKLPEVCLEIGTLITPEEFLVAWRGPSSGVDFFVDPFDSKCRFCFTRKTAFSFKDLSF 187
Query: 2975 HAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVPFDLLD 2796
+AV+ CDFK EF VRDINE++ Y + S V+ LQL S P + YRTADD++ +VPFDLLD
Sbjct: 188 YAVINCDFKMEFLVRDINEIKQYREMSSIVVLLQLASPPHVSYRTADDNVEVSVPFDLLD 247
Query: 2795 DEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIPYDCPAP-KFHE 2619
DEDPWIRTTD T++ +GRCN+YR+ VPPR G KLK+A++YL++ R+ P K +
Sbjct: 248 DEDPWIRTTDLTASGAVGRCNTYRVSVPPRHGPKLKKAMDYLRERRVQESSPRRPLKIRD 307
Query: 2618 EPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRSHDREVNV 2439
EP+FG M D FF H +E I F+++FL+NA IHK +FS QLS+RFFELL+S +EVN+
Sbjct: 308 EPNFGRLMEDTFFSIH-QEGIHFDIMFLLNAVIHKNVFSQHQLSERFFELLKSQPKEVNI 366
Query: 2438 AALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLP 2259
AAL +I S K PVFD +RL+ VQ LLKNPK++K+ K L D E+RRL++TPTKA+CLP
Sbjct: 367 AALKHICSYKRPVFDAYKRLKLVQEWLLKNPKLVKNQKELNDIIEIRRLVVTPTKAHCLP 426
Query: 2258 PEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLV 2079
PE+ELSNR+LR+Y++ ADRFLRVTFMDEG + +N+NVL YYVAPI++DM SF QKT +
Sbjct: 427 PELELSNRVLRQYKDVADRFLRVTFMDEGLETMNANVLNYYVAPILKDMKSVSFSQKTKI 486
Query: 2078 FNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMGKFTDKNV 1899
F RV+ I+ DGFYLCGRKYSFLAFSSNQLRDRSAWFFAE I V+ I++WMGKF ++NV
Sbjct: 487 FKRVRMIMTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKAINVNKIRAWMGKFNNRNV 546
Query: 1898 AKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKEVADKLQL 1719
AKCTARMG CFSST+ATVEVP ++V+ +LPDIERNGY FSDGIG ITPDLA+EVA+KL+L
Sbjct: 547 AKCTARMGQCFSSTYATVEVPRKEVHHDLPDIERNGYCFSDGIGTITPDLAREVAEKLKL 606
Query: 1718 TSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFL 1539
N P AYQIR+AG KGVVACWP K D RLS+R SM KF S HT+LEI SWTRFQPGFL
Sbjct: 607 ELNTPAAYQIRYAGYKGVVACWPSKGDGIRLSLRRSMNKFLSNHTILEICSWTRFQPGFL 666
Query: 1538 NRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNTAAMMLGA 1359
NRQI+ LLSAL VPD VF MQ MV+KL +L ++++AFDVLTSSCAEQGN AA+ML A
Sbjct: 667 NRQIVTLLSALKVPDEVFWDMQEKMVYKLNQMLVDSEVAFDVLTSSCAEQGNIAAIMLSA 726
Query: 1358 GFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSI 1179
GF+PQ+EPHLRGML IRA Q DL EK RIFVP GRWLMGC DE GVLEQGQCFIQ S
Sbjct: 727 GFRPQSEPHLRGMLMCIRAAQLWDLREKARIFVPSGRWLMGCLDEGGVLEQGQCFIQVSS 786
Query: 1178 PSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLV 999
P+LENCF G FS TK + QVIKG VVVAKNPCLHPGD+RILEAVD P LHHL DCLV
Sbjct: 787 PALENCFIKHGLRFSETKKNRQVIKGYVVVAKNPCLHPGDVRILEAVDAPDLHHLYDCLV 846
Query: 998 FPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQRAINQSD 819
FPQKG RPH NEASGSDLDGDLYFVTW+E+LIPPSK+SW PMDY E QKL R + Q D
Sbjct: 847 FPQKGARPHTNEASGSDLDGDLYFVTWEEDLIPPSKKSWTPMDYDSAEEQKLPRDVTQKD 906
Query: 818 IVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMP 639
I+DFFVK++V+E LGTICN+HVVHAD S++GA+DE CI LAELAATAVDFPKTGK+V MP
Sbjct: 907 IIDFFVKHIVSESLGTICNAHVVHADRSEHGALDENCIHLAELAATAVDFPKTGKLVTMP 966
Query: 638 QELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQVDDIPYD 459
+ LKPK YPDFMGK + +YKS K+LG LYR+IKD+ D D ++ + +D+PYD
Sbjct: 967 RHLKPKQYPDFMGKAEHQTYKSTKILGRLYRQIKDA-----CDEDLNSSELSLPEDVPYD 1021
Query: 458 TDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXX 279
T LEVPG+ADFI +AWD KC YDGQL+ LL Q+ V +EEE+VTGHVWSMPKY +R
Sbjct: 1022 TSLEVPGAADFISKAWDHKCSYDGQLSGLLGQYKVNNEEELVTGHVWSMPKYASRKQGEL 1081
Query: 278 XXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVE 99
+Y ++R+EF+ +F+ L DS++L++ E+N +YE+KASAWYQVTYHP WVKKSV+
Sbjct: 1082 KEKLKYSYTALRKEFREIFERLDSDSESLSDEERNLLYERKASAWYQVTYHPDWVKKSVD 1141
Query: 98 LRNSDD-KVATPMLSFAWVPAEYLVRIKIRRR 6
LR DD + MLSFAW+ ++L RIKIR +
Sbjct: 1142 LRQDDDGGTSALMLSFAWIATDFLARIKIRNQ 1173
>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
sinensis]
Length = 1197
Score = 1529 bits (3958), Expect = 0.0
Identities = 757/1181 (64%), Positives = 900/1181 (76%), Gaps = 6/1181 (0%)
Frame = -1
Query: 3527 ERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITNT 3348
E +K L+ QVS GGFD++V A EL K++E E+G WRCRLK S TP ES +F +TNT
Sbjct: 4 EGREKLLVDAQVSFGGFDRNVKAAELVKYLENEVGGVWRCRLKTSCTPSESYPDFSVTNT 63
Query: 3347 RDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNTR 3168
+++ DD+EKVEPHAFVHFA P T D AGR +L LNG+ L V+LGPE+ F +N R
Sbjct: 64 AEVRKTDDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGQALKVSLGPENPFRLNQR 123
Query: 3167 RMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSFK 2988
PF V VEIGT VSRDEF + W+GP G DF +DPFDG+CK FT++ AF+ K
Sbjct: 124 GRTSTPFKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLVDPFDGTCKFCFTRDIAFALK 183
Query: 2987 GTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVPF 2808
++ HAV+KC+FK EF VR+IN V+ Y + + LQL SSP ++YRTADDDI VPF
Sbjct: 184 SSTEHAVIKCEFKVEFLVREINLVKQYSEFSCVAILLQLASSPRVWYRTADDDILVLVPF 243
Query: 2807 DLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIPYDCPAP- 2631
D+LDD+DPWIRTTDFT + IGRCNSYRI + R KL + I YL + R+ P
Sbjct: 244 DMLDDDDPWIRTTDFTPSGAIGRCNSYRISISSRHRGKLSKVITYLGERRVQVDSLSRPI 303
Query: 2630 KFHEEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRSHDR 2451
EEPDF PM DPFFC H +E ISFE++FLVNA +HKGI + QLSD FF+LLR R
Sbjct: 304 TIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLSDSFFDLLRGQSR 363
Query: 2450 EVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKA 2271
EVNVAAL +IYS K PVFD +RL+ VQ LLK+P++ K K + D EVRRL+ITPTKA
Sbjct: 364 EVNVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRRLVITPTKA 423
Query: 2270 YCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQ 2091
YCLPPEVELSNR+LRKY++ ADRFLRVTFMDEG Q +N+NVL+Y++APIVRD+T NSF Q
Sbjct: 424 YCLPPEVELSNRVLRKYKDLADRFLRVTFMDEGLQTMNANVLSYFIAPIVRDITLNSFSQ 483
Query: 2090 KTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMGKFT 1911
KT VF RV++IL GFYLCGRK+SFLAFSS+QLRD SAWFF+E V DIK WMG+FT
Sbjct: 484 KTRVFKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSEDGKTSVLDIKKWMGRFT 543
Query: 1910 DKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAD 1731
DKN+AKC ARMG CFSST+ATVEVP +V+ LPDI+RNGYVFSDGIGKITPDLA EVA
Sbjct: 544 DKNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFSDGIGKITPDLAMEVAQ 603
Query: 1730 KLQLTSN-PPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRF 1554
KL+L N PPCAYQIR+AGCKGVVACWP K D R+S+R SM KFQS HT LEI SWTRF
Sbjct: 604 KLKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRMSLRESMNKFQSHHTTLEICSWTRF 663
Query: 1553 QPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNTAA 1374
QPGFLNRQII LLS L VPD +F MQ +M+ KL +L ++D+AF+VLT++CAEQGNTAA
Sbjct: 664 QPGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEVLTAACAEQGNTAA 723
Query: 1373 MMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCF 1194
+ML AGF PQTEPHLRGMLT IRA Q L EK RIFVP GRWLMGC DELGVLE GQCF
Sbjct: 724 IMLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARIFVPAGRWLMGCLDELGVLEGGQCF 783
Query: 1193 IQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHL 1014
IQ S P L NCFS G F+ TK LQVIKG VV+AKNPCLHPGDIRILEAVD+P LHHL
Sbjct: 784 IQVSEPFLGNCFSKHGSRFAETK-KLQVIKGFVVIAKNPCLHPGDIRILEAVDHPELHHL 842
Query: 1013 VDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQRA 834
DCLVFPQKGDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PM+Y+ E + L R
Sbjct: 843 YDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWPPMEYNAAEAKTLTRP 902
Query: 833 INQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKTGK 654
++Q DI++FF K+MVNE LGTICN+HVVHAD S+YGA+DE CI LAELAATAVDFPKTGK
Sbjct: 903 VDQRDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAELAATAVDFPKTGK 962
Query: 653 VVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQVD 474
+V MP LKPK+YPDFMGKE + SYKS K+LG LYR+ KD+ D+D +VD
Sbjct: 963 IVTMPAHLKPKLYPDFMGKEAYQSYKSNKILGRLYRQSKDA-------YDEDISVSSEVD 1015
Query: 473 ----DIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPK 306
DI YDTDLEVP S DFI +AW++KC YDGQLN LLEQ+ V EEE+VTGH+WSMPK
Sbjct: 1016 INPVDIHYDTDLEVPESVDFIADAWNQKCSYDGQLNGLLEQYKVNREEELVTGHIWSMPK 1075
Query: 305 YNNRXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYH 126
YN+R +Y+++R+EF++VF+ + D + L+E EKN ++E+KASAWYQVTYH
Sbjct: 1076 YNSRKQGELKERLKHSYSALRKEFRQVFEKMDSDCELLSEDEKNALFERKASAWYQVTYH 1135
Query: 125 PRWVKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRRD 3
P WVKKS++L+ D + +LSFAW+ +YL RIKIR R+
Sbjct: 1136 PEWVKKSLDLQEQDSARSVVLLSFAWIANDYLARIKIRCRE 1176
>gb|KDO61726.1| hypothetical protein CISIN_1g041430mg [Citrus sinensis]
Length = 1197
Score = 1528 bits (3956), Expect = 0.0
Identities = 757/1181 (64%), Positives = 900/1181 (76%), Gaps = 6/1181 (0%)
Frame = -1
Query: 3527 ERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITNT 3348
E +K L+ QVS GGFD++V A EL K++E E+G WRCRLK S TP ES +F +TNT
Sbjct: 4 EGREKLLVDAQVSFGGFDRNVKAAELVKYLENEVGGVWRCRLKTSCTPSESYPDFYVTNT 63
Query: 3347 RDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNTR 3168
+++ DD+EKVEPHAFVHFA P T D AGR +L LNG+ L V+LGPE+ F +N R
Sbjct: 64 AEVRKTDDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGRALKVSLGPENPFRLNQR 123
Query: 3167 RMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSFK 2988
PF V VEIGT VSRDEF + W+GP G DF +DPFDG+CK FT++ AF+ K
Sbjct: 124 GRTSTPFKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLVDPFDGTCKFCFTRDIAFALK 183
Query: 2987 GTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWVMELQLVSSPLLYYRTADDDIHATVPF 2808
++ HAV+KC+FK EF VR+IN V+ Y + + LQL SSP ++YRTADDDI VPF
Sbjct: 184 SSTEHAVIKCEFKVEFLVREINLVKQYSEFSCVAILLQLASSPRVWYRTADDDILVLVPF 243
Query: 2807 DLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIPYDCPAP- 2631
D+LDD+DPWIRTTDFT + IGRCNSYRI + R KL + I YL + R+ P
Sbjct: 244 DMLDDDDPWIRTTDFTPSGAIGRCNSYRISISSRHRGKLSKVITYLGERRVQVDSLSRPI 303
Query: 2630 KFHEEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRSHDR 2451
EEPDF PM DPFFC H +E ISFE++FLVNA +HKGI + QLSD FF+LLR R
Sbjct: 304 TIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLSDSFFDLLRGQSR 363
Query: 2450 EVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKA 2271
EVNVAAL +IYS K PVFD +RL+ VQ LLK+P++ K K + D EVRRL+ITPTKA
Sbjct: 364 EVNVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRRLVITPTKA 423
Query: 2270 YCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQ 2091
YCLPPEVELSNR+LRKY++ ADRFLRVTFMDEG Q +N+NVL+Y++APIVRD+T NSF Q
Sbjct: 424 YCLPPEVELSNRVLRKYKDLADRFLRVTFMDEGLQTMNANVLSYFIAPIVRDITLNSFSQ 483
Query: 2090 KTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMGKFT 1911
KT VF RV++IL GFYLCGRK+SFLAFSS+QLRD SAWFF+E V DIK WMG+FT
Sbjct: 484 KTRVFKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSEDGKTSVLDIKKWMGRFT 543
Query: 1910 DKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAD 1731
DKN+AKC ARMG CFSST+ATVEVP +V+ LPDI+RNGYVFSDGIGKITPDLA EVA
Sbjct: 544 DKNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFSDGIGKITPDLAMEVAQ 603
Query: 1730 KLQLTSN-PPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRF 1554
KL+L N PPCAYQIR+AGCKGVVACWP K D R+S+R SM KFQS HT LEI SWTRF
Sbjct: 604 KLKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRMSLRESMNKFQSHHTTLEICSWTRF 663
Query: 1553 QPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNTAA 1374
QPGFLNRQII LLS L VPD +F MQ +M+ KL +L ++D+AF+VLT++CAEQGNTAA
Sbjct: 664 QPGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEVLTAACAEQGNTAA 723
Query: 1373 MMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCF 1194
+ML AGF PQTEPHLRGMLT IRA Q L EK RIFVP GRWLMGC DELGVLE GQCF
Sbjct: 724 IMLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARIFVPAGRWLMGCLDELGVLEGGQCF 783
Query: 1193 IQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHL 1014
IQ S P L NCFS G F+ TK LQVIKG VV+AKNPCLHPGDIRILEAVD+P LHHL
Sbjct: 784 IQVSEPFLGNCFSKHGSRFAETK-KLQVIKGFVVIAKNPCLHPGDIRILEAVDHPELHHL 842
Query: 1013 VDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQRA 834
DCLVFPQKGDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PM+Y+ E + L R
Sbjct: 843 YDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWPPMEYNAAEAKTLTRP 902
Query: 833 INQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKTGK 654
++Q DI++FF K+MVNE LGTICN+HVVHAD S+YGA+DE CI LAELAATAVDFPKTGK
Sbjct: 903 VDQRDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAELAATAVDFPKTGK 962
Query: 653 VVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQVD 474
+V MP LKPK+YPDFMGKE + SYKS K+LG LYR+ KD+ D+D +VD
Sbjct: 963 IVTMPAHLKPKLYPDFMGKEAYQSYKSNKILGRLYRQSKDA-------YDEDISVSSEVD 1015
Query: 473 ----DIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPK 306
DI YDTDLEVP S DFI +AW++KC YDGQLN LLEQ+ V EEE+VTGH+WSMPK
Sbjct: 1016 INPVDIHYDTDLEVPESVDFIADAWNQKCSYDGQLNGLLEQYKVNREEELVTGHIWSMPK 1075
Query: 305 YNNRXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYH 126
YN+R +Y+++R+EF++VF+ + D + L+E EKN ++E+KASAWYQVTYH
Sbjct: 1076 YNSRKQGELKERLKHSYSALRKEFRQVFEKMDSDCELLSEDEKNALFERKASAWYQVTYH 1135
Query: 125 PRWVKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRRD 3
P WVKKS++L+ D + +LSFAW+ +YL RIKIR R+
Sbjct: 1136 PEWVKKSLDLQEQDSARSVVLLSFAWIANDYLARIKIRCRE 1176
>gb|KHG28504.1| RNA-dependent RNA polymerase 6 -like protein [Gossypium arboreum]
Length = 1214
Score = 1527 bits (3954), Expect = 0.0
Identities = 747/1178 (63%), Positives = 904/1178 (76%), Gaps = 4/1178 (0%)
Frame = -1
Query: 3527 ERDKKDLIITQVSLGGFDQDVTAKELAKFIEKEIGITWRCRLKKSWTPPESLLNFDITNT 3348
E K+ ++TQVS+GGFD+ V A++L K++E E+G+ WRCRLK SWTPPES NF+IT+T
Sbjct: 4 EGSVKETVVTQVSVGGFDRHVKARDLMKYLENEVGLVWRCRLKTSWTPPESYPNFEITDT 63
Query: 3347 RDLKLNDDFEKVEPHAFVHFASPDSATSIFDRAGRNQLELNGKILMVNLGPESSFLMNTR 3168
++ D+++KVEPHAFVHFASP + T D AGR +L N ++L V+LGPE+ + +N R
Sbjct: 64 TVIQRKDNYKKVEPHAFVHFASPQAVTWAVDAAGRTELAFNNQLLKVSLGPENPYYLNRR 123
Query: 3167 RMEIDPFTFRGVGVEIGTRVSRDEFLIGWKGPPKGADFFIDPFDGSCKINFTKETAFSFK 2988
R + PF V +EIGT S DEF +GW+GPP G +F +DPFD + K F+++TAFSFK
Sbjct: 124 RRDTTPFKLPDVSLEIGTLASCDEFFVGWRGPPSGVEFLVDPFDCTGKFCFSRDTAFSFK 183
Query: 2987 GTSLHAVLKCDFKTEFFVRDINEVRSYM---DQLSWVMELQLVSSPLLYYRTADDDIHAT 2817
GT+ HAV+KCDFK EF VR+INEV+ Y + +V+ LQL SSP ++YRTADDD +
Sbjct: 184 GTNEHAVIKCDFKVEFLVREINEVKQYKQYSEPSGFVVLLQLASSPWVWYRTADDDFEKS 243
Query: 2816 VPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQGKKLKEAIEYLKKWRIIPYDCP 2637
VPFDLLDD+D WIRTTDFT++ IGRCN+YR VPPR G KLK+A+ YL++ R+ D
Sbjct: 244 VPFDLLDDDDQWIRTTDFTASGAIGRCNTYRFLVPPRHGSKLKKAMVYLRERRVPVEDLK 303
Query: 2636 AP-KFHEEPDFGSPMPDPFFCFHPKEKISFELLFLVNAAIHKGIFSHFQLSDRFFELLRS 2460
+ + +EPDFG M D F+ + KE I FE++FLVNA +HKGIF+ QLS+ FF+LLR+
Sbjct: 304 SQLRIRDEPDFGRFMSDHFYYIY-KEGIPFEIMFLVNAVLHKGIFNQHQLSEDFFKLLRN 362
Query: 2459 HDREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPKMIKSFKGLGDSAEVRRLIITP 2280
EVNVAAL +IYS + PV+D E+L+ V LL+NPK+ KS L D E+RRL ITP
Sbjct: 363 QSMEVNVAALKHIYSYRCPVYDAYEKLKVVHDWLLRNPKLFKSPPQLDDIVEIRRLAITP 422
Query: 2279 TKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNS 2100
TKAYCL PEVELSNR+LRKY++ ADRFLRVTFMDEG Q +N+NVLTYY A IVRD+T S
Sbjct: 423 TKAYCLLPEVELSNRVLRKYKDVADRFLRVTFMDEGMQTMNANVLTYYNAAIVRDVTSTS 482
Query: 2099 FPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEGANIKVSDIKSWMG 1920
F QKT VF RVK+IL DGFYLCGRKYSFLAFS+NQLRDRSAWFFAE I V I WMG
Sbjct: 483 FSQKTGVFKRVKSILTDGFYLCGRKYSFLAFSANQLRDRSAWFFAEDGKINVLQIIGWMG 542
Query: 1919 KFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDIERNGYVFSDGIGKITPDLAKE 1740
KFT++N+AKC ARMG CFSST+A VEVP EQVN +LPDI+RNGY FSDGIGKITPDLA E
Sbjct: 543 KFTNRNIAKCAARMGQCFSSTYAAVEVPSEQVNMHLPDIKRNGYDFSDGIGKITPDLAME 602
Query: 1739 VADKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWT 1560
VA KL+L NPPCAYQIR+AGCKGVV+CWPE+ D RLS+R SMIKF S HT LEI SWT
Sbjct: 603 VAQKLKLDLNPPCAYQIRYAGCKGVVSCWPEEGDRIRLSLRTSMIKFFSHHTTLEICSWT 662
Query: 1559 RFQPGFLNRQIIILLSALGVPDSVFSLMQATMVHKLCHILENTDIAFDVLTSSCAEQGNT 1380
RFQPGFLNRQII LLS LGVPD VF MQ +MV KL +L +TD AF+V+ SSC EQG+T
Sbjct: 663 RFQPGFLNRQIITLLSTLGVPDEVFWGMQNSMVSKLDKVLVDTDAAFEVVISSCGEQGHT 722
Query: 1379 AAMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQ 1200
A+ML AGFKPQTEPHLRGMLT +RA Q L EK+RIF+ GRWLMG DELGVLEQGQ
Sbjct: 723 PAIMLSAGFKPQTEPHLRGMLTCVRASQLWGLREKSRIFIHSGRWLMGVLDELGVLEQGQ 782
Query: 1199 CFIQSSIPSLENCFSDQGPGFSGTKMDLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLH 1020
CFIQ S PSL+NCF G F+ TK + +VIKG VV+AKNPCLHPGDIRILEAVD PGLH
Sbjct: 783 CFIQVSTPSLQNCFLKHGSRFAETKKNFEVIKGLVVIAKNPCLHPGDIRILEAVDAPGLH 842
Query: 1019 HLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYSPGETQKLQ 840
HL DCLVFPQKG+RPH NEASGSDLDGDLYFVTW+E LIPPSK+S PM Y P E ++L
Sbjct: 843 HLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEEALIPPSKKSSQPMQYDPDEPRELN 902
Query: 839 RAINQSDIVDFFVKNMVNEKLGTICNSHVVHADLSDYGAMDEKCIKLAELAATAVDFPKT 660
R + DI++FF KNMVNE LG+ICN+HVVH+DLS++GA DEKCI LAELAA AVDFPKT
Sbjct: 903 RPVTHKDIIEFFSKNMVNEHLGSICNAHVVHSDLSEHGASDEKCIHLAELAAIAVDFPKT 962
Query: 659 GKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGELYRRIKDSPDLVVGDSDKDTLAVFQ 480
GK+V+MP +LKPK+YPDFMGKE+F SYKS K+LG LYR IKD+ D V +S + F
Sbjct: 963 GKIVSMPAQLKPKLYPDFMGKEEFQSYKSNKILGRLYRYIKDAYDKDVSESSE---LNFG 1019
Query: 479 VDDIPYDTDLEVPGSADFIREAWDRKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYN 300
DI YD DLE+ GSAD+I +AW +KC YDGQL LL+Q+ VK EEEVVTG +WSMPKY
Sbjct: 1020 ASDINYDADLEITGSADYIADAWAKKCSYDGQLIGLLKQYKVKREEEVVTGQIWSMPKYA 1079
Query: 299 NRXXXXXXXXXXLAYNSVRREFKRVFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPR 120
++ +Y SVR+EF+++F+N+ + + L E EKN +YE+KASAWYQVTYHP
Sbjct: 1080 SKKLGDLKEKLGHSYGSVRKEFRQLFENMDSEFEQLNEDEKNKLYERKASAWYQVTYHPE 1139
Query: 119 WVKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRR 6
WV+K +E + D MLSFAW+ A+YL RIK+R R
Sbjct: 1140 WVQKKLEFQKPDGDEGVVMLSFAWIAADYLARIKVRHR 1177