BLASTX nr result

ID: Papaver29_contig00018411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00018411
         (517 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHG26721.1| RNA-binding Musashi Rbp6 [Gossypium arboreum]           59   2e-06
ref|XP_006356840.1| PREDICTED: RNA-binding protein 1-like [Solan...    57   4e-06
ref|XP_009610224.1| PREDICTED: RNA-binding protein 1 [Nicotiana ...    56   9e-06

>gb|KHG26721.1| RNA-binding Musashi Rbp6 [Gossypium arboreum]
          Length = 393

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = -1

Query: 517 SEEAVENVMQKRFHELYGKAVEVKRTVFKDGSNNGQNGGYHMR 389
           SEEAVENVMQK FHEL  + VEVKR V K+G NNG N GY+M+
Sbjct: 169 SEEAVENVMQKSFHELSNRLVEVKRAVPKEG-NNGGNNGYNMK 210


>ref|XP_006356840.1| PREDICTED: RNA-binding protein 1-like [Solanum tuberosum]
          Length = 344

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 29/43 (67%), Positives = 33/43 (76%)
 Frame = -1

Query: 517 SEEAVENVMQKRFHELYGKAVEVKRTVFKDGSNNGQNGGYHMR 389
           SE+AVE VMQ+ FHEL GK VEVK+ + KDGSNN  N GYH R
Sbjct: 165 SEDAVEEVMQESFHELSGKFVEVKKAIPKDGSNNSGN-GYHSR 206


>ref|XP_009610224.1| PREDICTED: RNA-binding protein 1 [Nicotiana tomentosiformis]
          Length = 352

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = -1

Query: 517 SEEAVENVMQKRFHELYGKAVEVKRTVFKDGSNNGQNGGYHMR 389
           SE+AVE VMQK FHEL GK VEVKR + KD ++N  N GYH+R
Sbjct: 172 SEDAVEEVMQKNFHELSGKLVEVKRAIPKDENSNSSN-GYHVR 213


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