BLASTX nr result
ID: Papaver29_contig00017919
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00017919
(603 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymera... 92 2e-16
gb|KDO53373.1| hypothetical protein CISIN_1g018587mg [Citrus sin... 84 4e-14
gb|KDO53372.1| hypothetical protein CISIN_1g018587mg [Citrus sin... 84 4e-14
gb|KJB67900.1| hypothetical protein B456_010G216800 [Gossypium r... 84 6e-14
gb|KJB67899.1| hypothetical protein B456_010G216800 [Gossypium r... 84 6e-14
ref|XP_012451443.1| PREDICTED: probable mediator of RNA polymera... 84 6e-14
gb|KHG16250.1| Transcription elongation factor A N-terminal and ... 84 6e-14
ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Caps... 83 1e-13
ref|XP_012447170.1| PREDICTED: probable mediator of RNA polymera... 83 1e-13
gb|KJB60256.1| hypothetical protein B456_009G296400 [Gossypium r... 83 1e-13
gb|KHG09239.1| Transcription elongation factor A N-terminal and ... 83 1e-13
ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citr... 83 1e-13
ref|XP_006427872.1| hypothetical protein CICLE_v10025964mg [Citr... 83 1e-13
ref|XP_006427871.1| hypothetical protein CICLE_v10025964mg [Citr... 83 1e-13
ref|XP_013722875.1| PREDICTED: probable mediator of RNA polymera... 82 2e-13
ref|XP_013715189.1| PREDICTED: probable mediator of RNA polymera... 82 2e-13
ref|XP_013606513.1| PREDICTED: probable mediator of RNA polymera... 82 2e-13
ref|XP_012458766.1| PREDICTED: probable mediator of RNA polymera... 82 2e-13
ref|XP_012458764.1| PREDICTED: probable mediator of RNA polymera... 82 2e-13
ref|XP_012458765.1| PREDICTED: probable mediator of RNA polymera... 82 2e-13
>ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Nelumbo nucifera]
Length = 349
Score = 92.0 bits (227), Expect = 2e-16
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLSCRNCD 4
M+ D+FR ILR SGVDVW FIDTAISVASLDY++ELK+RRDGI+E+LY+P C+NC+
Sbjct: 1 MNFDDFRSILRNSGVDVWTFIDTAISVASLDYKNELKDRRDGIIERLYVPFVSGCQNCN 59
>gb|KDO53373.1| hypothetical protein CISIN_1g018587mg [Citrus sinensis]
Length = 286
Score = 84.3 bits (207), Expect = 4e-14
Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR IL+ +GVDVW FIDTAI VASLDY ELKERRD IVE+LY S CRNCD
Sbjct: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
>gb|KDO53372.1| hypothetical protein CISIN_1g018587mg [Citrus sinensis]
Length = 353
Score = 84.3 bits (207), Expect = 4e-14
Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR IL+ +GVDVW FIDTAI VASLDY ELKERRD IVE+LY S CRNCD
Sbjct: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
>gb|KJB67900.1| hypothetical protein B456_010G216800 [Gossypium raimondii]
Length = 327
Score = 84.0 bits (206), Expect = 6e-14
Identities = 40/60 (66%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR +L +GVDVW FIDTAI VASLDY ELK+RRDGIVE+LY S ++ C++CD
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60
>gb|KJB67899.1| hypothetical protein B456_010G216800 [Gossypium raimondii]
Length = 332
Score = 84.0 bits (206), Expect = 6e-14
Identities = 40/60 (66%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR +L +GVDVW FIDTAI VASLDY ELK+RRDGIVE+LY S ++ C++CD
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60
>ref|XP_012451443.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Gossypium raimondii]
gi|763800943|gb|KJB67898.1| hypothetical protein
B456_010G216800 [Gossypium raimondii]
Length = 335
Score = 84.0 bits (206), Expect = 6e-14
Identities = 40/60 (66%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR +L +GVDVW FIDTAI VASLDY ELK+RRDGIVE+LY S ++ C++CD
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60
>gb|KHG16250.1| Transcription elongation factor A N-terminal and central
domain-containing 2 [Gossypium arboreum]
Length = 335
Score = 84.0 bits (206), Expect = 6e-14
Identities = 40/60 (66%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR +L +GVDVW FIDTAI VASLDY ELK+RRDGIVE+LY S ++ C++CD
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60
>ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Capsella rubella]
gi|482556752|gb|EOA20944.1| hypothetical protein
CARUB_v10001280mg [Capsella rubella]
Length = 355
Score = 83.2 bits (204), Expect = 1e-13
Identities = 41/60 (68%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR I+ +GVDVW FIDTAI VASLDY ELK RRD IVE+LY S + CRNCD
Sbjct: 1 MDLDDFRSIMENAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
>ref|XP_012447170.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Gossypium raimondii]
gi|763793261|gb|KJB60257.1| hypothetical protein
B456_009G296400 [Gossypium raimondii]
Length = 338
Score = 82.8 bits (203), Expect = 1e-13
Identities = 39/60 (65%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR +L +GVDVW FIDTAI ASLDY +ELK+RRDGIVE+LY S ++ C+ CD
Sbjct: 3 MDLDDFRSVLETAGVDVWTFIDTAILAASLDYGEELKQRRDGIVERLYATSMVNGCKTCD 62
>gb|KJB60256.1| hypothetical protein B456_009G296400 [Gossypium raimondii]
Length = 284
Score = 82.8 bits (203), Expect = 1e-13
Identities = 39/60 (65%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR +L +GVDVW FIDTAI ASLDY +ELK+RRDGIVE+LY S ++ C+ CD
Sbjct: 3 MDLDDFRSVLETAGVDVWTFIDTAILAASLDYGEELKQRRDGIVERLYATSMVNGCKTCD 62
>gb|KHG09239.1| Transcription elongation factor A N-terminal and central
domain-containing 2 [Gossypium arboreum]
Length = 338
Score = 82.8 bits (203), Expect = 1e-13
Identities = 39/60 (65%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR +L +GVDVW FIDTAI ASLDY +ELK+RRDGIVE+LY S ++ C+ CD
Sbjct: 3 MDLDDFRSVLETAGVDVWTFIDTAILAASLDYGEELKQRRDGIVERLYATSMVNGCKTCD 62
>ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
gi|568820070|ref|XP_006464554.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Citrus sinensis] gi|557529863|gb|ESR41113.1|
hypothetical protein CICLE_v10025964mg [Citrus
clementina]
Length = 353
Score = 82.8 bits (203), Expect = 1e-13
Identities = 42/60 (70%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDL++FR IL+ +GVDVW FIDTAI VASLDY ELKERRD IVE+LY S CRNCD
Sbjct: 1 MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
>ref|XP_006427872.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
gi|557529862|gb|ESR41112.1| hypothetical protein
CICLE_v10025964mg [Citrus clementina]
Length = 286
Score = 82.8 bits (203), Expect = 1e-13
Identities = 42/60 (70%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDL++FR IL+ +GVDVW FIDTAI VASLDY ELKERRD IVE+LY S CRNCD
Sbjct: 1 MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
>ref|XP_006427871.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
gi|557529861|gb|ESR41111.1| hypothetical protein
CICLE_v10025964mg [Citrus clementina]
Length = 218
Score = 82.8 bits (203), Expect = 1e-13
Identities = 42/60 (70%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDL++FR IL+ +GVDVW FIDTAI VASLDY ELKERRD IVE+LY S CRNCD
Sbjct: 1 MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
>ref|XP_013722875.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Brassica napus]
gi|923905606|ref|XP_013722876.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit 26c
[Brassica napus]
Length = 341
Score = 82.4 bits (202), Expect = 2e-13
Identities = 40/60 (66%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR ++ +GVDVW FIDTAI VASLDY ELK+RRD IVE+LY S + CRNCD
Sbjct: 1 MDLDDFRTVMDNAGVDVWTFIDTAILVASLDYGHELKQRRDNIVERLYATSMANKCRNCD 60
>ref|XP_013715189.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Brassica napus]
gi|923888645|ref|XP_013715557.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit 26c
[Brassica napus]
Length = 340
Score = 82.4 bits (202), Expect = 2e-13
Identities = 40/60 (66%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR ++ +GVDVW FIDTAI VASLDY ELK+RRD IVE+LY S + CRNCD
Sbjct: 1 MDLDDFRTVMDNAGVDVWTFIDTAILVASLDYGHELKQRRDNIVERLYATSMANKCRNCD 60
>ref|XP_013606513.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Brassica oleracea var. oleracea]
Length = 347
Score = 82.4 bits (202), Expect = 2e-13
Identities = 40/60 (66%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR ++ +GVDVW FIDTAI VASLDY ELK+RRD IVE+LY S + CRNCD
Sbjct: 1 MDLDDFRTVMDNAGVDVWTFIDTAILVASLDYGHELKQRRDNIVERLYATSMANKCRNCD 60
>ref|XP_012458766.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X3 [Gossypium raimondii]
Length = 274
Score = 82.4 bits (202), Expect = 2e-13
Identities = 39/60 (65%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR +L +GVDVW FIDTAI VASLDY E K+RRDGIVE+LY S ++ C++CD
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQEFKQRRDGIVERLYATSMVTRCKSCD 60
>ref|XP_012458764.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X1 [Gossypium raimondii]
Length = 337
Score = 82.4 bits (202), Expect = 2e-13
Identities = 39/60 (65%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR +L +GVDVW FIDTAI VASLDY E K+RRDGIVE+LY S ++ C++CD
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQEFKQRRDGIVERLYATSMVTRCKSCD 60
>ref|XP_012458765.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Gossypium raimondii]
gi|763808077|gb|KJB74979.1| hypothetical protein
B456_012G017100 [Gossypium raimondii]
Length = 336
Score = 82.4 bits (202), Expect = 2e-13
Identities = 39/60 (65%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = -1
Query: 180 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 4
MDLD+FR +L +GVDVW FIDTAI VASLDY E K+RRDGIVE+LY S ++ C++CD
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQEFKQRRDGIVERLYATSMVTRCKSCD 60