BLASTX nr result

ID: Papaver29_contig00017767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00017767
         (790 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010269721.1| PREDICTED: transcription initiation factor I...    59   4e-06
ref|XP_002277679.1| PREDICTED: transcription initiation factor I...    59   4e-06
ref|XP_012090036.1| PREDICTED: transcription initiation factor I...    58   7e-06
ref|XP_012090035.1| PREDICTED: transcription initiation factor I...    58   7e-06
ref|XP_012090034.1| PREDICTED: transcription initiation factor I...    58   7e-06
ref|XP_002513521.1| transcription initiation factor iib, putativ...    58   7e-06
ref|NP_001149721.1| transcription initiation factor IIB [Zea may...    58   7e-06
gb|ACF84713.1| unknown [Zea mays]                                      58   7e-06
tpg|DAA40631.1| TPA: hypothetical protein ZEAMMB73_839050 [Zea m...    58   7e-06
ref|XP_009388781.1| PREDICTED: transcription initiation factor I...    58   9e-06

>ref|XP_010269721.1| PREDICTED: transcription initiation factor IIB [Nelumbo nucifera]
          Length = 312

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 5/46 (10%)
 Frame = +3

Query: 627 STKKEIGRAKEYIVKQMEIELGQSMEMGTIQ-----ENFCICKGIT 749
           +TKKEIGRAKEYIVKQ+E+E+GQSMEMGTI        FC   G+T
Sbjct: 178 ATKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMT 223


>ref|XP_002277679.1| PREDICTED: transcription initiation factor IIB [Vitis vinifera]
           gi|297734946|emb|CBI17180.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 5/46 (10%)
 Frame = +3

Query: 627 STKKEIGRAKEYIVKQMEIELGQSMEMGTIQ-----ENFCICKGIT 749
           +TKKEIGRAKEYIVKQ+E+E+GQSMEMGTI        FC   G+T
Sbjct: 180 ATKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMT 225


>ref|XP_012090036.1| PREDICTED: transcription initiation factor IIB isoform X3 [Jatropha
           curcas]
          Length = 274

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = +3

Query: 627 STKKEIGRAKEYIVKQMEIELGQSMEMGTI 716
           +TKKEIGRAKEYIVKQ+E+ELGQSMEMGTI
Sbjct: 178 ATKKEIGRAKEYIVKQLEVELGQSMEMGTI 207


>ref|XP_012090035.1| PREDICTED: transcription initiation factor IIB isoform X2 [Jatropha
           curcas]
          Length = 308

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = +3

Query: 627 STKKEIGRAKEYIVKQMEIELGQSMEMGTI 716
           +TKKEIGRAKEYIVKQ+E+ELGQSMEMGTI
Sbjct: 174 ATKKEIGRAKEYIVKQLEVELGQSMEMGTI 203


>ref|XP_012090034.1| PREDICTED: transcription initiation factor IIB isoform X1 [Jatropha
           curcas] gi|643705984|gb|KDP22116.1| hypothetical protein
           JCGZ_25947 [Jatropha curcas]
          Length = 312

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = +3

Query: 627 STKKEIGRAKEYIVKQMEIELGQSMEMGTI 716
           +TKKEIGRAKEYIVKQ+E+ELGQSMEMGTI
Sbjct: 178 ATKKEIGRAKEYIVKQLEVELGQSMEMGTI 207


>ref|XP_002513521.1| transcription initiation factor iib, putative [Ricinus communis]
           gi|223547429|gb|EEF48924.1| transcription initiation
           factor iib, putative [Ricinus communis]
          Length = 312

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = +3

Query: 627 STKKEIGRAKEYIVKQMEIELGQSMEMGTI 716
           +TKKEIGRAKEYIVKQ+E+ELGQSMEMGTI
Sbjct: 178 ATKKEIGRAKEYIVKQLEVELGQSMEMGTI 207


>ref|NP_001149721.1| transcription initiation factor IIB [Zea mays]
           gi|195629762|gb|ACG36522.1| transcription initiation
           factor IIB [Zea mays] gi|414590059|tpg|DAA40630.1| TPA:
           transcription initiation factor IIB [Zea mays]
          Length = 312

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 5/46 (10%)
 Frame = +3

Query: 627 STKKEIGRAKEYIVKQMEIELGQSMEMGTIQ-----ENFCICKGIT 749
           +TKKEIGRAKE+IVKQ+E+E+GQSMEMGTI        FC   G+T
Sbjct: 178 ATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMT 223


>gb|ACF84713.1| unknown [Zea mays]
          Length = 198

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 5/46 (10%)
 Frame = +3

Query: 627 STKKEIGRAKEYIVKQMEIELGQSMEMGTIQ-----ENFCICKGIT 749
           +TKKEIGRAKE+IVKQ+E+E+GQSMEMGTI        FC   G+T
Sbjct: 64  ATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMT 109


>tpg|DAA40631.1| TPA: hypothetical protein ZEAMMB73_839050 [Zea mays]
          Length = 330

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 5/46 (10%)
 Frame = +3

Query: 627 STKKEIGRAKEYIVKQMEIELGQSMEMGTIQ-----ENFCICKGIT 749
           +TKKEIGRAKE+IVKQ+E+E+GQSMEMGTI        FC   G+T
Sbjct: 178 ATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMT 223


>ref|XP_009388781.1| PREDICTED: transcription initiation factor IIB-like [Musa acuminata
           subsp. malaccensis]
          Length = 312

 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 5/46 (10%)
 Frame = +3

Query: 627 STKKEIGRAKEYIVKQMEIELGQSMEMGTIQ-----ENFCICKGIT 749
           +TKKEIGRAKE+IVKQ+EIE+GQSMEMGTI        FC   G+T
Sbjct: 178 ATKKEIGRAKEFIVKQLEIEMGQSMEMGTIHAGDFLRRFCSHLGMT 223


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