BLASTX nr result
ID: Papaver29_contig00017729
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver29_contig00017729 (2935 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_012468868.1| PREDICTED: uncharacterized protein LOC105786... 60 3e-06 gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 60 9e-06 emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 60 9e-06 >ref|XP_012468868.1| PREDICTED: uncharacterized protein LOC105786945 [Gossypium raimondii] Length = 396 Score = 59.7 bits (143), Expect(2) = 3e-06 Identities = 42/153 (27%), Positives = 62/153 (40%) Frame = +3 Query: 2475 TKSHLRNLITKHKPDLIFLQETKHHESYXXXXXXXXQYLDMIVVNPTGMAGTVGGIVLAW 2654 T LR ++ H P ++F ETK Y + I V+ G T GG+ LAW Sbjct: 62 TVRRLRQMLRLHNPQMVFFMETKLGRQQMERIRRRCGYTNGIEVDSEG---TRGGLCLAW 118 Query: 2655 FVKIDLQFIHNFDNQIDVLILDKIRKFDSMLSVVYACPYKMKKHVSCIYFNDLARTV*TP 2834 ++D+ IDVL+ DK + Y PY + S LA + P Sbjct: 119 RNEVDISLNSFSKRHIDVLVDDKEIGCKWRFTGFYGSPYTQDRSESWAVLKSLATNMDLP 178 Query: 2835 WLVL*YLNFVLIESEKRGGKRIDPCETNFFSQM 2933 W V+ N ++ EK+GG D F ++ Sbjct: 179 WFVMGDFNEIMYGVEKKGGLPRDERRMELFRRV 211 Score = 21.9 bits (45), Expect(2) = 3e-06 Identities = 6/15 (40%), Positives = 13/15 (86%) Frame = +2 Query: 2426 MSINILAWNFQGLGK 2470 +++ I++WN +GLG+ Sbjct: 45 VTMKIISWNVRGLGR 59 >gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score: 42.57) [Arabidopsis thaliana] Length = 1662 Score = 60.5 bits (145), Expect = 9e-06 Identities = 45/153 (29%), Positives = 71/153 (46%) Frame = +3 Query: 2475 TKSHLRNLITKHKPDLIFLQETKHHESYXXXXXXXXQYLDMIVVNPTGMAGTVGGIVLAW 2654 T+S L NL K D++FL ET + + ++I P G +G G+ L W Sbjct: 397 TQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHSG---GLALLW 453 Query: 2655 FVKIDLQFIHNFDNQIDVLILDKIRKFDSMLSVVYACPYKMKKHVSCIYFNDLARTV*TP 2834 + L ++ D IDV I I + LS VY P + ++H +F +L++T P Sbjct: 454 KDSVRLSNLYQDDRHIDVHI--SINNINFYLSRVYGHPCQSERHSLWTHFENLSKTRNDP 511 Query: 2835 WLVL*YLNFVLIESEKRGGKRIDPCETNFFSQM 2933 W+++ N +L +EK GG + D F M Sbjct: 512 WILIGDFNEILSNNEKIGGPQRDEWTFRGFRNM 544 >emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1| putative protein [Arabidopsis thaliana] Length = 1294 Score = 60.5 bits (145), Expect = 9e-06 Identities = 45/153 (29%), Positives = 71/153 (46%) Frame = +3 Query: 2475 TKSHLRNLITKHKPDLIFLQETKHHESYXXXXXXXXQYLDMIVVNPTGMAGTVGGIVLAW 2654 T+S L NL K D++FL ET + + ++I P G +G G+ L W Sbjct: 377 TQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHSG---GLALLW 433 Query: 2655 FVKIDLQFIHNFDNQIDVLILDKIRKFDSMLSVVYACPYKMKKHVSCIYFNDLARTV*TP 2834 + L ++ D IDV I I + LS VY P + ++H +F +L++T P Sbjct: 434 KDSVRLSNLYQDDRHIDVHI--SINNINFYLSRVYGHPCQSERHSLWTHFENLSKTRNDP 491 Query: 2835 WLVL*YLNFVLIESEKRGGKRIDPCETNFFSQM 2933 W+++ N +L +EK GG + D F M Sbjct: 492 WILIGDFNEILSNNEKIGGPQRDEWTFRGFRNM 524