BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00017590
         (1114 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub...   343   1e-91
ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub...   306   2e-80
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              306   2e-80
ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I sub...   301   5e-79
ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I sub...   301   5e-79
gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus g...   301   5e-79
ref|XP_009345036.1| PREDICTED: DNA-directed RNA polymerase I sub...   300   1e-78
ref|XP_009345035.1| PREDICTED: DNA-directed RNA polymerase I sub...   300   1e-78
ref|XP_008392178.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   299   3e-78
ref|XP_011469851.1| PREDICTED: DNA-directed RNA polymerase I sub...   298   4e-78
ref|XP_008240981.1| PREDICTED: DNA-directed RNA polymerase I sub...   295   4e-77
ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I sub...   293   1e-76
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun...   293   1e-76
ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I sub...   291   9e-76
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro...   290   1e-75
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro...   290   1e-75
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   290   1e-75
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   289   3e-75
ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I sub...   289   3e-75
gb|AIO05696.1| putative RNA polymerase AI large subunit, partial...   289   3e-75

>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nelumbo
            nucifera]
          Length = 1676

 Score =  343 bits (880), Expect = 1e-91
 Identities = 180/324 (55%), Positives = 227/324 (70%), Gaps = 8/324 (2%)
 Frame = -2

Query: 1110 GDANDIEA-EDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGN 934
            GD +D EA +DLG DAQKRK QATDEMDY ED ME E    EN  +          ++  
Sbjct: 1352 GDDDDYEAPDDLGADAQKRKRQATDEMDY-EDDMENEIVNTENGRSDIEASAGFESEIDQ 1410

Query: 933  KENDQGT--DGEPQILDAEEEPKSVPASKS--SDKREPGSXXXXXXXXXXXXXXKESDRV 766
             E + G   DGE Q+ DAE+E    P+     S  +  G               K+SDR 
Sbjct: 1411 AEVEAGNIMDGEIQVFDAEDEASQTPSQHGTVSKSKSSGGKDEADARGMTRRTKKDSDRA 1470

Query: 765  FFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDYNR---DAKL 595
            FF+ A+GLDFEVH RFT+EPHI+L+++ +K AKNVY+KRSGNIE CSV+   +   + ++
Sbjct: 1471 FFMVAEGLDFEVHFRFTNEPHILLAQIAQKTAKNVYVKRSGNIELCSVVVPKKADGEPEI 1530

Query: 594  AALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIK 415
              LQT+GVDF  FW+M DDLDI  + SND+H VL TYGVEAARATII +V  VF +YGI 
Sbjct: 1531 PELQTSGVDFPTFWNMQDDLDIRRLKSNDIHAVLNTYGVEAARATIIEQVNQVFKSYGIA 1590

Query: 414  VNIRHLTLIADYMTHTGAIRPFSRYGIASSTSPFSKMSFETAAKFIVDAAYHGEVDDLES 235
            VNIRHL+LIAD+MT TG  RP SR+GIA + SPFSKMS+ETA++F+++AAYHGE+D+LES
Sbjct: 1591 VNIRHLSLIADFMTQTGGYRPMSRFGIAETISPFSKMSYETASRFVIEAAYHGEMDNLES 1650

Query: 234  PSARICLGLPVKVGTGSFDLLQQV 163
            PSARICLGLPVK+GTG FDL+Q++
Sbjct: 1651 PSARICLGLPVKMGTGCFDLMQKI 1674


>ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis
            vinifera]
          Length = 1691

 Score =  306 bits (784), Expect = 2e-80
 Identities = 173/339 (51%), Positives = 219/339 (64%), Gaps = 26/339 (7%)
 Frame = -2

Query: 1101 NDIEAEDLGVDAQKRKEQATDEMDYGE-----DGMETETSLVENVDAXXXXXXXXSDDVG 937
            +D  AEDLG+DAQKRK+QA+DEMDYG+     D  E    L E +D          D+V 
Sbjct: 1364 DDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLVE-------DEVE 1416

Query: 936  NKENDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFV 757
               N+     E  I D ++E   VP SKS   +   +              K+ DR   V
Sbjct: 1417 ISNNE-----EVGISDPKDEDSKVP-SKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILV 1470

Query: 756  EAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDYNRDA-------- 601
            +AKG  FEVH RFT+EPHI+L+++ +KAA  VYI+ SG I+ C VID N+D         
Sbjct: 1471 KAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDP 1530

Query: 600  ------------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 457
                        KL ALQTAGVDF AFW M D+LD+ ++ SN++H +L T+GVEAARATI
Sbjct: 1531 KKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATI 1590

Query: 456  INEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 280
            I EV  VF+AYG+KVNIRHL+LIAD+MTH+G  RP +R+ GIA S SPFSKM+FETA+KF
Sbjct: 1591 IKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKF 1650

Query: 279  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            IV+AA HG  D+LES SARICLGLPVK+GTG FDL+Q++
Sbjct: 1651 IVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1689


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  306 bits (784), Expect = 2e-80
 Identities = 173/339 (51%), Positives = 219/339 (64%), Gaps = 26/339 (7%)
 Frame = -2

Query: 1101 NDIEAEDLGVDAQKRKEQATDEMDYGE-----DGMETETSLVENVDAXXXXXXXXSDDVG 937
            +D  AEDLG+DAQKRK+QA+DEMDYG+     D  E    L E +D          D+V 
Sbjct: 1342 DDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLVE-------DEVE 1394

Query: 936  NKENDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFV 757
               N+     E  I D ++E   VP SKS   +   +              K+ DR   V
Sbjct: 1395 ISNNE-----EVGISDPKDEDSKVP-SKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILV 1448

Query: 756  EAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDYNRDA-------- 601
            +AKG  FEVH RFT+EPHI+L+++ +KAA  VYI+ SG I+ C VID N+D         
Sbjct: 1449 KAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDP 1508

Query: 600  ------------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 457
                        KL ALQTAGVDF AFW M D+LD+ ++ SN++H +L T+GVEAARATI
Sbjct: 1509 KKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATI 1568

Query: 456  INEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 280
            I EV  VF+AYG+KVNIRHL+LIAD+MTH+G  RP +R+ GIA S SPFSKM+FETA+KF
Sbjct: 1569 IKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKF 1628

Query: 279  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            IV+AA HG  D+LES SARICLGLPVK+GTG FDL+Q++
Sbjct: 1629 IVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1667


>ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X2
            [Eucalyptus grandis]
          Length = 1669

 Score =  301 bits (772), Expect = 5e-79
 Identities = 173/339 (51%), Positives = 215/339 (63%), Gaps = 22/339 (6%)
 Frame = -2

Query: 1113 EGDANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGN 934
            +GD +  + +DLG D QKRK QATDEM+Y EDG E E +  E + A        ++DV  
Sbjct: 1340 DGDDDGNDNDDLGFDGQKRKRQATDEMEY-EDGYEEERNEPE-LSAGLESDGDQANDVDI 1397

Query: 933  KENDQGTDG-EPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFV 757
             E+  G  G  P+I+   +  KS   +KS D+ +                 KE DR  FV
Sbjct: 1398 GEDGDGPPGIAPEIVSPSKTKKSKKNAKSDDEGKK---------RVRTKVIKEFDRAIFV 1448

Query: 756  EAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------YNRDA 601
             A GLDFEVH RFT+EPH++L ++ +K AK VY++ SG IE C VI         Y  D 
Sbjct: 1449 AANGLDFEVHFRFTNEPHVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYGEDP 1508

Query: 600  K------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 457
            K            + A+ T G DF A W M D LDI +I SND+H +L TYGVEAAR TI
Sbjct: 1509 KRRQKIEAKDKEAIPAINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETI 1568

Query: 456  INEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 280
            I EV+ VF +YGI V++RHLTLIAD+MTH G  RP +R  GIA S SPFSKMSFETA+KF
Sbjct: 1569 IREVQNVFGSYGISVDMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETASKF 1628

Query: 279  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            IVDAAYHG VD+LE+PSARICLGLP+K+GTGSFDLLQ++
Sbjct: 1629 IVDAAYHGVVDNLETPSARICLGLPMKMGTGSFDLLQKI 1667


>ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X1
            [Eucalyptus grandis]
          Length = 1669

 Score =  301 bits (772), Expect = 5e-79
 Identities = 173/339 (51%), Positives = 215/339 (63%), Gaps = 22/339 (6%)
 Frame = -2

Query: 1113 EGDANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGN 934
            +GD +  + +DLG D QKRK QATDEM+Y EDG E E +  E + A        ++DV  
Sbjct: 1340 DGDDDGNDNDDLGFDGQKRKRQATDEMEY-EDGYEEERNEPE-LSAGLESDGDQANDVDI 1397

Query: 933  KENDQGTDG-EPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFV 757
             E+  G  G  P+I+   +  KS   +KS D+ +                 KE DR  FV
Sbjct: 1398 GEDGDGPPGIAPEIVSPSKTKKSKKNAKSDDEGKK---------RVRTKVIKEFDRAIFV 1448

Query: 756  EAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------YNRDA 601
             A GLDFEVH RFT+EPH++L ++ +K AK VY++ SG IE C VI         Y  D 
Sbjct: 1449 AANGLDFEVHFRFTNEPHVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYGEDP 1508

Query: 600  K------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 457
            K            + A+ T G DF A W M D LDI +I SND+H +L TYGVEAAR TI
Sbjct: 1509 KRRQKIEAKDKEAIPAINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETI 1568

Query: 456  INEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 280
            I EV+ VF +YGI V++RHLTLIAD+MTH G  RP +R  GIA S SPFSKMSFETA+KF
Sbjct: 1569 IREVQNVFGSYGISVDMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETASKF 1628

Query: 279  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            IVDAAYHG VD+LE+PSARICLGLP+K+GTGSFDLLQ++
Sbjct: 1629 IVDAAYHGVVDNLETPSARICLGLPMKMGTGSFDLLQKI 1667


>gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus grandis]
          Length = 1606

 Score =  301 bits (772), Expect = 5e-79
 Identities = 173/339 (51%), Positives = 215/339 (63%), Gaps = 22/339 (6%)
 Frame = -2

Query: 1113 EGDANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGN 934
            +GD +  + +DLG D QKRK QATDEM+Y EDG E E +  E + A        ++DV  
Sbjct: 1277 DGDDDGNDNDDLGFDGQKRKRQATDEMEY-EDGYEEERNEPE-LSAGLESDGDQANDVDI 1334

Query: 933  KENDQGTDG-EPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFV 757
             E+  G  G  P+I+   +  KS   +KS D+ +                 KE DR  FV
Sbjct: 1335 GEDGDGPPGIAPEIVSPSKTKKSKKNAKSDDEGKK---------RVRTKVIKEFDRAIFV 1385

Query: 756  EAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------YNRDA 601
             A GLDFEVH RFT+EPH++L ++ +K AK VY++ SG IE C VI         Y  D 
Sbjct: 1386 AANGLDFEVHFRFTNEPHVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYGEDP 1445

Query: 600  K------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 457
            K            + A+ T G DF A W M D LDI +I SND+H +L TYGVEAAR TI
Sbjct: 1446 KRRQKIEAKDKEAIPAINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETI 1505

Query: 456  INEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 280
            I EV+ VF +YGI V++RHLTLIAD+MTH G  RP +R  GIA S SPFSKMSFETA+KF
Sbjct: 1506 IREVQNVFGSYGISVDMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETASKF 1565

Query: 279  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            IVDAAYHG VD+LE+PSARICLGLP+K+GTGSFDLLQ++
Sbjct: 1566 IVDAAYHGVVDNLETPSARICLGLPMKMGTGSFDLLQKI 1604


>ref|XP_009345036.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X2
            [Pyrus x bretschneideri]
          Length = 1373

 Score =  300 bits (769), Expect = 1e-78
 Identities = 164/338 (48%), Positives = 217/338 (64%), Gaps = 29/338 (8%)
 Frame = -2

Query: 1089 AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGNKENDQGTD 910
            AED G+DAQKRK QA DEMDY EDG E E    +  D         +D+  + E   G D
Sbjct: 1037 AEDFGMDAQKRKLQAFDEMDY-EDGCEDEVRDGDLTDGDEVENDADNDEENDVET--GKD 1093

Query: 909  GEPQILDAE--------EEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFVE 754
            G  +++DA         EE  ++P  KS +K+                  K++DR  FV 
Sbjct: 1094 GAIEVVDATDEMPTSPLEEAGNLPKPKSKEKKNKSGATIKKKKIRAQLVRKDTDRSIFVS 1153

Query: 753  AKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCS--------VIDYNRDAK 598
            AKG  FE+H +FTDEPHI+L+++ ++ A+ V ++RSG+++ C         V+ Y +D +
Sbjct: 1154 AKGFHFEIHFKFTDEPHILLAQIAQQTAQKVSMQRSGSVDDCKQITCDENQVLLYGKDPE 1213

Query: 597  ------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATII 454
                        +AALQT GVDF  FW + D LD+ ++ SN++H +L TYGVEAAR TII
Sbjct: 1214 NKQSYSSKEKKEMAALQTTGVDFRTFWKLQDVLDVRYLYSNNIHAMLNTYGVEAARETII 1273

Query: 453  NEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKFI 277
             E+  VF +YGI VNIRHLTLIADYMTH+G  RP +R+ GIA S SPF+KMSFETA+KFI
Sbjct: 1274 REIMNVFKSYGISVNIRHLTLIADYMTHSGGYRPMNRFGGIAESISPFNKMSFETASKFI 1333

Query: 276  VDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            V+AAYHG+ DDLE+PS+RICLGLPVKVGTG FDL+Q++
Sbjct: 1334 VEAAYHGQTDDLETPSSRICLGLPVKVGTGCFDLMQKI 1371


>ref|XP_009345035.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X1
            [Pyrus x bretschneideri]
          Length = 1684

 Score =  300 bits (769), Expect = 1e-78
 Identities = 164/338 (48%), Positives = 217/338 (64%), Gaps = 29/338 (8%)
 Frame = -2

Query: 1089 AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGNKENDQGTD 910
            AED G+DAQKRK QA DEMDY EDG E E    +  D         +D+  + E   G D
Sbjct: 1348 AEDFGMDAQKRKLQAFDEMDY-EDGCEDEVRDGDLTDGDEVENDADNDEENDVET--GKD 1404

Query: 909  GEPQILDAE--------EEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFVE 754
            G  +++DA         EE  ++P  KS +K+                  K++DR  FV 
Sbjct: 1405 GAIEVVDATDEMPTSPLEEAGNLPKPKSKEKKNKSGATIKKKKIRAQLVRKDTDRSIFVS 1464

Query: 753  AKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCS--------VIDYNRDAK 598
            AKG  FE+H +FTDEPHI+L+++ ++ A+ V ++RSG+++ C         V+ Y +D +
Sbjct: 1465 AKGFHFEIHFKFTDEPHILLAQIAQQTAQKVSMQRSGSVDDCKQITCDENQVLLYGKDPE 1524

Query: 597  ------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATII 454
                        +AALQT GVDF  FW + D LD+ ++ SN++H +L TYGVEAAR TII
Sbjct: 1525 NKQSYSSKEKKEMAALQTTGVDFRTFWKLQDVLDVRYLYSNNIHAMLNTYGVEAARETII 1584

Query: 453  NEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKFI 277
             E+  VF +YGI VNIRHLTLIADYMTH+G  RP +R+ GIA S SPF+KMSFETA+KFI
Sbjct: 1585 REIMNVFKSYGISVNIRHLTLIADYMTHSGGYRPMNRFGGIAESISPFNKMSFETASKFI 1644

Query: 276  VDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            V+AAYHG+ DDLE+PS+RICLGLPVKVGTG FDL+Q++
Sbjct: 1645 VEAAYHGQTDDLETPSSRICLGLPVKVGTGCFDLMQKI 1682


>ref|XP_008392178.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            rpa1-like [Malus domestica]
          Length = 1682

 Score =  299 bits (765), Expect = 3e-78
 Identities = 164/338 (48%), Positives = 217/338 (64%), Gaps = 29/338 (8%)
 Frame = -2

Query: 1089 AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGNKENDQGTD 910
            AED G+DAQKRK QA DEMDY EDG E E    +  D         +D+  + E   G D
Sbjct: 1346 AEDFGMDAQKRKLQAFDEMDY-EDGCEDEVRDGDLTDGDEVENDADNDEENDVET--GKD 1402

Query: 909  GEPQILDAEEEPKSVPA--------SKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFVE 754
            G  +++DA +E  + P         +KS +K+                  K++DR  FV 
Sbjct: 1403 GAIEVVDATDEMPANPLEEAGDLLKTKSKEKKNKSGATIKKKKIRAQLVRKDTDRSIFVS 1462

Query: 753  AKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCS--------VIDYNRDAK 598
            AKG  FEVH +FTDEPHI+L+++ ++ A+ V ++RSG+++ C         V+ Y +D +
Sbjct: 1463 AKGFHFEVHFKFTDEPHILLAQIAQQTAQKVCMQRSGSVDDCKQITCDENQVLLYGKDPE 1522

Query: 597  ------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATII 454
                        +AALQT GVDF  FW + D LD+ ++ SN++H +L TYGVEAAR TII
Sbjct: 1523 NKQSYSSKEKKEMAALQTTGVDFRTFWKLQDVLDVRYLYSNNIHAMLNTYGVEAARETII 1582

Query: 453  NEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKFI 277
             E+  VF +YGI VNIRHLTLIADYMTH+G  RP +R+ GIA S SPF+KMSFETA+KFI
Sbjct: 1583 REIMNVFKSYGISVNIRHLTLIADYMTHSGGYRPMNRFGGIAESISPFNKMSFETASKFI 1642

Query: 276  VDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            V+AAYHG+ DDLE+PS+RICLGLPVKVGTG FDL+Q++
Sbjct: 1643 VEAAYHGQTDDLETPSSRICLGLPVKVGTGCFDLMQKI 1680


>ref|XP_011469851.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Fragaria vesca
            subsp. vesca]
          Length = 1674

 Score =  298 bits (764), Expect = 4e-78
 Identities = 170/350 (48%), Positives = 212/350 (60%), Gaps = 33/350 (9%)
 Frame = -2

Query: 1113 EGDANDIE--AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDV 940
            +GD +D    AED G+DAQKRK Q TDEM+Y E   E E S   + D           D 
Sbjct: 1329 DGDIDDSGEGAEDFGLDAQKRKRQGTDEMEY-EGDCEDEVSEGHHSDRFESEI-----DK 1382

Query: 939  GNKENDQGTDGEPQILDAEEEPKSVPASKSSDK-----REPGSXXXXXXXXXXXXXXKES 775
            G  + +   DG   I DA +E    P++  + K     ++  S              KE 
Sbjct: 1383 GESDVEIDKDGVMGISDANDEMHESPSTGDTSKPQSKGKKTKSREKIKKKTRAKLVRKEY 1442

Query: 774  DRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDY------ 613
            DR  FV AKG  FE+H +FT+EPHI+L ++  K A+NVY+K SGNI  C  ID       
Sbjct: 1443 DRATFVSAKGFHFEIHFKFTNEPHILLDQIARKTARNVYVKSSGNILDCKDIDIYGNEDQ 1502

Query: 612  -------------------NRDAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLR 490
                                 + K+ A+QTAGVDF   W + DDLD+N+I SN++H +L 
Sbjct: 1503 VFCSWNDPRNKLPGEKNPTKEEKKMRAVQTAGVDFATLWKLQDDLDVNYIYSNNIHAMLN 1562

Query: 489  TYGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPF 313
            TYGVEAAR TII E+  VF  YGI VNIRHL+LIADYMTH+G  RP +R+ GIA STSP 
Sbjct: 1563 TYGVEAARETIIKEISNVFKVYGISVNIRHLSLIADYMTHSGGYRPMNRFGGIAESTSPI 1622

Query: 312  SKMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            +KMSFETA+KFI +AAYHGE DDLE+PSARICLGLPVKVGTGSFDL+Q++
Sbjct: 1623 NKMSFETASKFIREAAYHGETDDLETPSARICLGLPVKVGTGSFDLMQKM 1672


>ref|XP_008240981.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Prunus mume]
          Length = 1637

 Score =  295 bits (756), Expect = 4e-77
 Identities = 169/353 (47%), Positives = 217/353 (61%), Gaps = 37/353 (10%)
 Frame = -2

Query: 1110 GDANDIE----AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDD 943
            G A+D E     ED G+DA KRK QATDEMDY EDG + E    +  D           +
Sbjct: 1286 GGADDGEHGEGVEDFGLDAHKRKLQATDEMDY-EDGCDDEVREADLSDGDE-------SE 1337

Query: 942  VGNKENDQ--GTDGEPQILDAEEEPKSVPASKSSDKREP---------GSXXXXXXXXXX 796
            +  +EN+   G DGE  ++DA +E    P  ++ D  +P         GS          
Sbjct: 1338 IDEEENEVEIGKDGEIGVIDASDEMPGSPLEEAGDLAKPKSKEKKTKSGSQIRKKRKVRA 1397

Query: 795  XXXXKESDRVFFVEAKGLDFEVHLRFTD-EPHIILSKVVEKAAKNVYIKRSGNIERCS-- 625
                KE+DR  FV AKG  FEVH RFTD EPHI+LS++ +K A+ VYI+RSG +  C   
Sbjct: 1398 EMVKKETDRAIFVSAKGFHFEVHFRFTDNEPHILLSQIAQKTAQKVYIQRSGKVADCKQI 1457

Query: 624  ------VIDYNRDAK------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHT 499
                  V+ + +D +            + ALQT G+DFG FW + D LD+ +I SN++H 
Sbjct: 1458 TCDENQVLCFGKDPENKQSFSSKEKKEMPALQTTGIDFGTFWQLQDILDVRYIYSNNIHA 1517

Query: 498  VLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASST 322
            +L TYGVEAAR TII E+  VF +YGI VNIRHLTLIAD+MTH G  RP +R+ GI  S 
Sbjct: 1518 MLNTYGVEAARETIIREINNVFKSYGISVNIRHLTLIADFMTHAGGYRPLNRFGGIVESI 1577

Query: 321  SPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            SPF+KM+FETA+KFIV+AAYHG+VD LE+PSARICLGLPV VGTG FDL+ ++
Sbjct: 1578 SPFNKMTFETASKFIVEAAYHGQVDRLETPSARICLGLPVNVGTGCFDLMHKM 1630


>ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Elaeis
            guineensis]
          Length = 1674

 Score =  293 bits (751), Expect = 1e-76
 Identities = 167/333 (50%), Positives = 215/333 (64%), Gaps = 18/333 (5%)
 Frame = -2

Query: 1107 DANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSL-VENVDAXXXXXXXXSDDVGNK 931
            D +D   ED G+DA+KRK++A+DEM+Y EDG+E E S   +  D           D    
Sbjct: 1342 DDDDGINEDEGMDAEKRKKRASDEMEY-EDGIEKENSAKADEHDGETQSGFESEIDQVEA 1400

Query: 930  ENDQGTDGEPQI------LDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKES-- 775
            + D    G+P +      L+AEE P+S   ++ +   E G                +   
Sbjct: 1401 DEDYTVGGDPSMEVEDPSLEAEETPESPSKAEPTPTLEDGKKKQKLADNKESKSESKKKT 1460

Query: 774  --------DRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVI 619
                    +R  FV+AKGL FEVH  F  EP I+L++V +KAAK+VY+K S NIE CSV 
Sbjct: 1461 TKPRKKKINRTIFVDAKGLTFEVHYIFKKEPRILLAEVAQKAAKSVYVKESKNIELCSVP 1520

Query: 618  DYNRDAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKG 439
            +  +D  L+ LQTAGV+F AFWD+ D LDIN I SND+H +L TYGVEAARATII EVKG
Sbjct: 1521 EPKKDEPLS-LQTAGVNFQAFWDLEDHLDINKITSNDIHAMLNTYGVEAARATIIKEVKG 1579

Query: 438  VFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRYGIAS-STSPFSKMSFETAAKFIVDAAY 262
            VFDAYGI+VNIRHLTLIAD+MT  G  RP +R G+ + +TSPF KM+FETA KFIV +A+
Sbjct: 1580 VFDAYGIRVNIRHLTLIADFMTFHGGYRPMNRIGMNNFNTSPFGKMTFETATKFIVGSAF 1639

Query: 261  HGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            HGEVD L++PSA +CLG PVK+GTG FDL+Q +
Sbjct: 1640 HGEVDTLDAPSASVCLGQPVKMGTGCFDLMQNL 1672


>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
            gi|462398594|gb|EMJ04262.1| hypothetical protein
            PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  293 bits (751), Expect = 1e-76
 Identities = 168/353 (47%), Positives = 216/353 (61%), Gaps = 37/353 (10%)
 Frame = -2

Query: 1110 GDANDIE----AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDD 943
            G A+D E     ED G+DA KRK QATDEMDY EDG + E    +  D           +
Sbjct: 1261 GGADDGEHGEGVEDFGLDAHKRKLQATDEMDY-EDGCDDEVREADLSDGDE-------SE 1312

Query: 942  VGNKENDQ--GTDGEPQILDAEEEPKSVPASKSSDKREP---------GSXXXXXXXXXX 796
            +  +EN+   G DGE  ++DA +E    P  ++ D  +P         GS          
Sbjct: 1313 IDEEENEVEIGKDGEIGVIDANDEMPGSPLEEAGDLAKPKSKEKKTKSGSQIRKKRKVRA 1372

Query: 795  XXXXKESDRVFFVEAKGLDFEVHLRFTD-EPHIILSKVVEKAAKNVYIKRSGNIERCS-- 625
                KE+DR  FV AKG  FEVH RF D EPHI+LS++ +K A+ VYI+RSG +  C   
Sbjct: 1373 EMVKKETDRAIFVSAKGFHFEVHFRFADNEPHILLSQIAQKTAQKVYIQRSGKVADCKQI 1432

Query: 624  ------VIDYNRDAK------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHT 499
                  V+ + +D +            + ALQT G+DFG FW + D LD+ +I SN++H 
Sbjct: 1433 TCDENQVLCFGKDPENKQSFSSKEKKEMPALQTTGIDFGTFWQLQDVLDVRYIYSNNIHA 1492

Query: 498  VLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASST 322
            +L TYGVEAAR TII E+  VF +YGI VNIRHLTLIAD+MTH G  RP +R+ GI  S 
Sbjct: 1493 MLNTYGVEAARETIIREINNVFKSYGISVNIRHLTLIADFMTHAGGYRPLNRFGGIVESI 1552

Query: 321  SPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            SPF+KM+FETA+KFIV+AAYHG+VD LE+PSARICLGLPV VGTG FDL+ ++
Sbjct: 1553 SPFNKMTFETASKFIVEAAYHGQVDRLETPSARICLGLPVNVGTGCFDLMHKM 1605


>ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium
            raimondii] gi|763751831|gb|KJB19219.1| hypothetical
            protein B456_003G089300 [Gossypium raimondii]
          Length = 1674

 Score =  291 bits (744), Expect = 9e-76
 Identities = 167/329 (50%), Positives = 207/329 (62%), Gaps = 20/329 (6%)
 Frame = -2

Query: 1089 AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGNKENDQ-GT 913
            AEDLG+DAQK+K+QATDEMDY EDG E E +   ++           D+ G  EN+  G+
Sbjct: 1346 AEDLGLDAQKQKQQATDEMDY-EDGSEEEQNEGASLAGLESENDMSEDENGTIENNVIGS 1404

Query: 912  DGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFVEAKGLDFE 733
            D E   +     P +   SK   +                   KE+DR  F   KGL FE
Sbjct: 1405 DNEKDDI-FHGSPNAEDGSKLKSREGNTRAEPKRKKMRGKFIRKETDRAIFSATKGLVFE 1463

Query: 732  VHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------YNRDAK------- 598
            VH +F +EPHI+L+++ EK AK VYI+  G I++C V D        Y  D K       
Sbjct: 1464 VHFKFVNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKQRKSPSG 1523

Query: 597  ---LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDA 427
               + AL TAGVDFGAFW M   LD+ ++ SN++H +L TYGVEAAR TII+E+  VF +
Sbjct: 1524 KANIPALHTAGVDFGAFWKMEGHLDVRYLYSNNIHAMLNTYGVEAARETIISEISNVFTS 1583

Query: 426  YGIKVNIRHLTLIADYMTHTGAIRPFSRYG-IASSTSPFSKMSFETAAKFIVDAAYHGEV 250
            YGI VNIRHLTLIAD+MTH+G  RP SR G IA   SPFSKMSFETA+KFIVDAA HG V
Sbjct: 1584 YGIGVNIRHLTLIADFMTHSGRYRPMSRLGSIAECISPFSKMSFETASKFIVDAAKHGLV 1643

Query: 249  DDLESPSARICLGLPVKVGTGSFDLLQQV 163
            D+LE+PS+RICLGLPVK+GTGSF L+Q V
Sbjct: 1644 DNLETPSSRICLGLPVKMGTGSFGLMQNV 1672


>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
            gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
            isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  290 bits (742), Expect = 1e-75
 Identities = 169/339 (49%), Positives = 214/339 (63%), Gaps = 22/339 (6%)
 Frame = -2

Query: 1113 EGDANDIE-AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVG 937
            + DA+D E AEDLG+DAQK+K+Q TDEMDY ED  E E +   ++ A         D+ G
Sbjct: 1060 DDDADDEERAEDLGLDAQKQKQQTTDEMDY-EDDSEVEQNEGASLAALESEIDMSEDETG 1118

Query: 936  NKE-NDQGTD-GEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVF 763
              + N  G+D G+ +I  ++  P     S    + E                 KESDR  
Sbjct: 1119 TIQINMIGSDNGKDEI--SQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAI 1176

Query: 762  FVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------YNR 607
            F   +GL FEVH +  +EPHI+L+++ EK AK VYI+  G I++C V D        Y  
Sbjct: 1177 FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGE 1236

Query: 606  DAK----------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 457
            D K          + AL T GVDFGAFW M D +D+ ++ SN +H +L TYGVEAAR TI
Sbjct: 1237 DPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETI 1296

Query: 456  INEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 280
            I E+  VF +YGI VNIRHLTLIAD+MTH+G  RP SR  GIA S SPFSKMSFETA+KF
Sbjct: 1297 IREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKF 1356

Query: 279  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            IV+AA HG VD+LE+PS+RICLGLPVK+GTGSFDL+Q+V
Sbjct: 1357 IVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKV 1395


>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
            gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
            isoform 3 [Theobroma cacao]
          Length = 1400

 Score =  290 bits (742), Expect = 1e-75
 Identities = 169/339 (49%), Positives = 214/339 (63%), Gaps = 22/339 (6%)
 Frame = -2

Query: 1113 EGDANDIE-AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVG 937
            + DA+D E AEDLG+DAQK+K+Q TDEMDY ED  E E +   ++ A         D+ G
Sbjct: 1063 DDDADDEERAEDLGLDAQKQKQQTTDEMDY-EDDSEVEQNEGASLAALESEIDMSEDETG 1121

Query: 936  NKE-NDQGTD-GEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVF 763
              + N  G+D G+ +I  ++  P     S    + E                 KESDR  
Sbjct: 1122 TIQINMIGSDNGKDEI--SQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAI 1179

Query: 762  FVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------YNR 607
            F   +GL FEVH +  +EPHI+L+++ EK AK VYI+  G I++C V D        Y  
Sbjct: 1180 FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGE 1239

Query: 606  DAK----------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 457
            D K          + AL T GVDFGAFW M D +D+ ++ SN +H +L TYGVEAAR TI
Sbjct: 1240 DPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETI 1299

Query: 456  INEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 280
            I E+  VF +YGI VNIRHLTLIAD+MTH+G  RP SR  GIA S SPFSKMSFETA+KF
Sbjct: 1300 IREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKF 1359

Query: 279  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            IV+AA HG VD+LE+PS+RICLGLPVK+GTGSFDL+Q+V
Sbjct: 1360 IVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKV 1398


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  290 bits (742), Expect = 1e-75
 Identities = 169/339 (49%), Positives = 214/339 (63%), Gaps = 22/339 (6%)
 Frame = -2

Query: 1113 EGDANDIE-AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVG 937
            + DA+D E AEDLG+DAQK+K+Q TDEMDY ED  E E +   ++ A         D+ G
Sbjct: 1352 DDDADDEERAEDLGLDAQKQKQQTTDEMDY-EDDSEVEQNEGASLAALESEIDMSEDETG 1410

Query: 936  NKE-NDQGTD-GEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVF 763
              + N  G+D G+ +I  ++  P     S    + E                 KESDR  
Sbjct: 1411 TIQINMIGSDNGKDEI--SQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAI 1468

Query: 762  FVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------YNR 607
            F   +GL FEVH +  +EPHI+L+++ EK AK VYI+  G I++C V D        Y  
Sbjct: 1469 FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGE 1528

Query: 606  DAK----------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 457
            D K          + AL T GVDFGAFW M D +D+ ++ SN +H +L TYGVEAAR TI
Sbjct: 1529 DPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETI 1588

Query: 456  INEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 280
            I E+  VF +YGI VNIRHLTLIAD+MTH+G  RP SR  GIA S SPFSKMSFETA+KF
Sbjct: 1589 IREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKF 1648

Query: 279  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            IV+AA HG VD+LE+PS+RICLGLPVK+GTGSFDL+Q+V
Sbjct: 1649 IVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKV 1687


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  289 bits (740), Expect = 3e-75
 Identities = 170/349 (48%), Positives = 215/349 (61%), Gaps = 32/349 (9%)
 Frame = -2

Query: 1113 EGDANDIE-AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVG 937
            + D +D E A+DLG+DAQKRK QATDEMDY +DG E E +  E+  +          D G
Sbjct: 1338 DNDDDDGERADDLGLDAQKRKLQATDEMDY-DDGFEEELNEGESTASEEESGFESEIDQG 1396

Query: 936  NKE----NDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKES-- 775
            + E    ND   D E        +P S P SK      P                ++S  
Sbjct: 1397 DNETEISNDVMLDNEASETLPLRKP-SKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRI 1455

Query: 774  ----DRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--- 616
                DR  FVEA+ + FEVH +FT+EPHI+L+++ +K AK VYI+  G IE+C V D   
Sbjct: 1456 SKDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKE 1515

Query: 615  -----YNRDAK------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRT 487
                 Y +D K            + AL   GVDF  FW M D LD+ +I SN++H +L+T
Sbjct: 1516 SQVIYYGKDPKERVDLKPDVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKT 1575

Query: 486  YGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFS 310
            YGVEAAR TII E+  VF +YGI V+ RHL+LIAD+MTHTG  RP SR  GIA S SPFS
Sbjct: 1576 YGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFS 1635

Query: 309  KMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            KMSFETA+KFIV+AA HGE+D+LE+PSARICLGLPVK+GTGSFDL+Q++
Sbjct: 1636 KMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKL 1684


>ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana
            tomentosiformis]
          Length = 1938

 Score =  289 bits (739), Expect = 3e-75
 Identities = 156/330 (47%), Positives = 209/330 (63%), Gaps = 22/330 (6%)
 Frame = -2

Query: 1086 EDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGNKENDQGTD- 910
            EDL  DAQKRK+Q TDEMDY +DG E E S  E            + ++GN++ ++  D 
Sbjct: 1613 EDLSSDAQKRKQQTTDEMDY-DDGPEDEASEAETTAEVEDEKSDQTHEIGNRDEEETGDH 1671

Query: 909  -GEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFVEAKGLDFE 733
              E Q      E  ++  +KS  K                   K+SDR  F+  +GL FE
Sbjct: 1672 GNEEQTSKLHSEESNIKTAKSKTKTT-----VQQKKKKETRSKKDSDRSVFIAVEGLHFE 1726

Query: 732  VHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDYN------------------- 610
            VH RF +EPHI+L++V +K AK VYIK +G IE+C ++ Y+                   
Sbjct: 1727 VHFRFVNEPHILLAQVAQKTAKKVYIKNAGKIEQCRMVKYDVSENTVMWDVKQIKNQSQD 1786

Query: 609  RDAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFD 430
             D+   AL+ AGVDFG FW+M DD+D+N I +N++ ++L TYGVEAARA II EVK VF 
Sbjct: 1787 TDSAYWALKAAGVDFGTFWEMQDDIDVNRIYTNNIRSMLNTYGVEAARAAIIREVKTVFG 1846

Query: 429  AYGIKVNIRHLTLIADYMTHTGAIRPFSRYG-IASSTSPFSKMSFETAAKFIVDAAYHGE 253
             YG++++ RHL+LIADYMTHTG  +P SR+G I+ S SPF KMSFETA+KFIV+AA HG 
Sbjct: 1847 IYGVEIDFRHLSLIADYMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAASHGL 1906

Query: 252  VDDLESPSARICLGLPVKVGTGSFDLLQQV 163
             D+LE+PS+RICLGLPVK+GTG FD++Q++
Sbjct: 1907 TDNLETPSSRICLGLPVKMGTGCFDIMQKL 1936


>gb|AIO05696.1| putative RNA polymerase AI large subunit, partial [Cocos nucifera]
          Length = 1669

 Score =  289 bits (739), Expect = 3e-75
 Identities = 162/333 (48%), Positives = 214/333 (64%), Gaps = 18/333 (5%)
 Frame = -2

Query: 1107 DANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSL-VENVDAXXXXXXXXSDDVGNK 931
            D +D   ED G+DA+KRK++A+DEM+Y EDG+E E+S   +  D           D    
Sbjct: 1338 DDDDGINEDEGMDAEKRKQRASDEMEY-EDGIEKESSAKADEHDGDTQSGFESEIDQVEA 1396

Query: 930  ENDQGTDGEPQI------LDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKES-- 775
            + D    G+P +      L+ EE P+S   ++ +   E G                +   
Sbjct: 1397 DEDYTVGGDPSMEVEDPSLEVEETPESPSKAEPTPTLEDGKKKQKLADSKESKSESKKKK 1456

Query: 774  --------DRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVI 619
                    +R  FV+AKGL FEVH  F +EP I+L++V +K AK+VY++ S NIE CSV 
Sbjct: 1457 TKSRKKKINRTIFVDAKGLKFEVHYIFKEEPRILLAEVAQKTAKSVYVRDSKNIELCSVA 1516

Query: 618  DYNRDAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKG 439
            +  +D  L+ LQTAGV+F AFWD+ D LD+N I SND+H +L TYGVE ARATII EVKG
Sbjct: 1517 EPKKDEPLS-LQTAGVNFQAFWDLEDHLDVNKITSNDIHAMLNTYGVEVARATIIKEVKG 1575

Query: 438  VFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRYGIAS-STSPFSKMSFETAAKFIVDAAY 262
            VFDAYGI+VNIRHLTLIAD+MT  G  RP +R G+ + +TSPF KM+FETA KFIV +A+
Sbjct: 1576 VFDAYGIRVNIRHLTLIADFMTFHGGYRPMNRIGMNNFNTSPFGKMTFETATKFIVGSAF 1635

Query: 261  HGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 163
            HGEVD L++PSA +CLG PVK+GTG FDL+Q +
Sbjct: 1636 HGEVDALDAPSASVCLGQPVKMGTGCFDLMQNL 1668