BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00016376
         (565 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010241989.1| PREDICTED: mediator of RNA polymerase II tra...    42   8e-11
ref|XP_010241990.1| PREDICTED: mediator of RNA polymerase II tra...    42   8e-11
ref|XP_010918427.1| PREDICTED: mediator of RNA polymerase II tra...    43   2e-10
ref|XP_006827802.1| PREDICTED: mediator of RNA polymerase II tra...    39   3e-09

>ref|XP_010241989.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
           isoform X1 [Nelumbo nucifera]
          Length = 1231

 Score = 42.4 bits (98), Expect(4) = 8e-11
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = -1

Query: 274 GQWLQVASKTSITAGVSPSLNPPPWTGVVP*AVYLLVLEKKL 149
           G  +Q   KT+ T GV PS+NPP W G  P A YL   ++ L
Sbjct: 325 GNGIQATPKTTTTNGVPPSVNPPSWAGFAPLAAYLFSWQEYL 366



 Score = 38.9 bits (89), Expect(4) = 8e-11
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = -1

Query: 436 SSRWPNFLCPCYVFFSGSVQ 377
           S+RWPNFLC C VF SGSVQ
Sbjct: 238 SARWPNFLCVCSVFSSGSVQ 257



 Score = 29.3 bits (64), Expect(4) = 8e-11
 Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
 Frame = -2

Query: 348 LLDVDAIIT*EG------VPIVNQFTVVAWEV 271
           ++  DAIIT  G      VPIVN  TVV WEV
Sbjct: 289 IMAADAIITEAGTMHVAGVPIVNPSTVVVWEV 320



 Score = 21.2 bits (43), Expect(4) = 8e-11
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 380 STSKWFTTSNG 348
           + SKWF+TS G
Sbjct: 270 AASKWFSTSKG 280


>ref|XP_010241990.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
           isoform X2 [Nelumbo nucifera]
          Length = 998

 Score = 42.4 bits (98), Expect(4) = 8e-11
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = -1

Query: 274 GQWLQVASKTSITAGVSPSLNPPPWTGVVP*AVYLLVLEKKL 149
           G  +Q   KT+ T GV PS+NPP W G  P A YL   ++ L
Sbjct: 325 GNGIQATPKTTTTNGVPPSVNPPSWAGFAPLAAYLFSWQEYL 366



 Score = 38.9 bits (89), Expect(4) = 8e-11
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = -1

Query: 436 SSRWPNFLCPCYVFFSGSVQ 377
           S+RWPNFLC C VF SGSVQ
Sbjct: 238 SARWPNFLCVCSVFSSGSVQ 257



 Score = 29.3 bits (64), Expect(4) = 8e-11
 Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
 Frame = -2

Query: 348 LLDVDAIIT*EG------VPIVNQFTVVAWEV 271
           ++  DAIIT  G      VPIVN  TVV WEV
Sbjct: 289 IMAADAIITEAGTMHVAGVPIVNPSTVVVWEV 320



 Score = 21.2 bits (43), Expect(4) = 8e-11
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 380 STSKWFTTSNG 348
           + SKWF+TS G
Sbjct: 270 AASKWFSTSKG 280


>ref|XP_010918427.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
           [Elaeis guineensis]
          Length = 1199

 Score = 42.7 bits (99), Expect(4) = 2e-10
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = -1

Query: 274 GQWLQVASKTSITAGVSPSLNPPPWTGVVP*AVYLLVLEKKLV 146
           G  +Q  +K + ++ V PSLNPP WTG  P A YL  L++  V
Sbjct: 280 GNGIQATAKINTSSAVPPSLNPPCWTGFAPLAAYLFSLQQYFV 322



 Score = 37.4 bits (85), Expect(4) = 2e-10
 Identities = 19/30 (63%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
 Frame = -1

Query: 460 EPFLV--STISSRWPNFLCPCYVFFSGSVQ 377
           E FL+  S  S RWP+FLC C VF SGSVQ
Sbjct: 184 EKFLLQKSQASVRWPHFLCVCSVFSSGSVQ 213



 Score = 28.5 bits (62), Expect(4) = 2e-10
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
 Frame = -2

Query: 348 LLDVDAIIT*EG------VPIVNQFTVVAWEV 271
           ++  DAIIT  G      VP+VN  TVV WEV
Sbjct: 244 IMAADAIITEAGSMHVAGVPLVNPSTVVVWEV 275



 Score = 21.6 bits (44), Expect(4) = 2e-10
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 380 STSKWFTTSNG 348
           S  KWFTTS G
Sbjct: 225 SQPKWFTTSKG 235


>ref|XP_006827802.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
           [Amborella trichopoda] gi|548832422|gb|ERM95218.1|
           hypothetical protein AMTR_s00009p00267330 [Amborella
           trichopoda]
          Length = 1247

 Score = 39.3 bits (90), Expect(3) = 3e-09
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -1

Query: 274 GQWLQVASKTSITAGVSPSLNPPPWTGVVP*AVYLLVLEKKLV 146
           G  LQ  +K +   G+ P +NPP WTG  P A YL   ++ LV
Sbjct: 333 GNSLQATTKANSGNGIPPFVNPPSWTGFAPLAAYLFSWQEYLV 375



 Score = 38.9 bits (89), Expect(3) = 3e-09
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = -1

Query: 436 SSRWPNFLCPCYVFFSGSVQ 377
           S+RWPNFLC C VF SGSVQ
Sbjct: 246 SARWPNFLCVCSVFSSGSVQ 265



 Score = 29.3 bits (64), Expect(3) = 3e-09
 Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
 Frame = -2

Query: 348 LLDVDAIIT*EG------VPIVNQFTVVAWEV 271
           ++  DAIIT  G      VPIVN  TVV WEV
Sbjct: 297 IMAADAIITEAGTMHVAGVPIVNPSTVVVWEV 328