BLASTX nr result
ID: Papaver29_contig00016296
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00016296
(779 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF,... 170 1e-39
ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF,... 168 3e-39
ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF,... 164 5e-38
ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF,... 162 3e-37
ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF,... 152 3e-34
emb|CBI32760.3| unnamed protein product [Vitis vinifera] 152 3e-34
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr... 144 9e-32
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr... 144 9e-32
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr... 144 9e-32
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,... 142 2e-31
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,... 142 2e-31
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,... 142 2e-31
ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [... 142 2e-31
ref|XP_012485938.1| PREDICTED: RNA polymerase sigma factor sigF,... 142 3e-31
gb|KJB36543.1| hypothetical protein B456_006G165200 [Gossypium r... 142 3e-31
ref|XP_012485937.1| PREDICTED: RNA polymerase sigma factor sigF,... 142 3e-31
gb|KHG01807.1| RNA polymerase sigma factor rpoD [Gossypium arbor... 141 6e-31
gb|KDO48082.1| hypothetical protein CISIN_1g008352mg [Citrus sin... 136 1e-29
gb|KDO48081.1| hypothetical protein CISIN_1g008352mg [Citrus sin... 136 1e-29
gb|KDO48080.1| hypothetical protein CISIN_1g008352mg [Citrus sin... 136 1e-29
>ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Nelumbo nucifera]
Length = 565
Score = 170 bits (430), Expect = 1e-39
Identities = 118/266 (44%), Positives = 156/266 (58%), Gaps = 9/266 (3%)
Frame = -1
Query: 773 PSKHQLRNAHPLSVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQRDDLRSLLHL-REE 600
P + QL+N+ SV +LHE TRHFPASVL QEQRDD+R L + RE+
Sbjct: 15 PPRTQLKNSSS-SVTLLHEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIRED 73
Query: 599 KPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPGLWYLSPPSQR-ENK 423
K + LDR ++++ L +EK+ S D+Y + FERQLLY PGLWYL P + E
Sbjct: 74 KTSQAMLDRRKLEDKVHLYEEKK---SCQPDRYWEGFERQLLYWPGLWYLLPSLYKGEKP 130
Query: 422 ASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSL-----IVASNSHLHNANEL 258
S+ QS ++ + + V+ CD L LAK+AVL SKQA+SL + ++SH +L
Sbjct: 131 LLSMVTQSTAAGTVKNVDVRPCDALELAKKAVLASKQAASLAKDYELFGADSHESFLPDL 190
Query: 257 IPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEISSLRTTDKHHKT-SLID 81
P N I P +E VRS RLLERQSK+R P+ ++ E S+ R +D H K D
Sbjct: 191 EPRNLANKI-PLREEVAVRSKRLLERQSKRRWIPRPKVVVSEASTSRKSDIHKKIHEGFD 249
Query: 80 LSDPLRLFLSGAEARQLLTAKEEKEL 3
+DPLRLFL G E +QLLT KEE EL
Sbjct: 250 TNDPLRLFLWGPETKQLLTPKEESEL 275
>ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Nelumbo nucifera]
Length = 568
Score = 168 bits (426), Expect = 3e-39
Identities = 117/268 (43%), Positives = 156/268 (58%), Gaps = 11/268 (4%)
Frame = -1
Query: 773 PSKHQLRNAHP--LSVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQRDDLRSLLHL-R 606
P + QL+N+ + V +LHE TRHFPASVL QEQRDD+R L + R
Sbjct: 15 PPRTQLKNSSSSGMPVTLLHEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIR 74
Query: 605 EEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPGLWYLSPPSQR-E 429
E+K + LDR ++++ L +EK+ S D+Y + FERQLLY PGLWYL P + E
Sbjct: 75 EDKTSQAMLDRRKLEDKVHLYEEKK---SCQPDRYWEGFERQLLYWPGLWYLLPSLYKGE 131
Query: 428 NKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSL-----IVASNSHLHNAN 264
S+ QS ++ + + V+ CD L LAK+AVL SKQA+SL + ++SH
Sbjct: 132 KPLLSMVTQSTAAGTVKNVDVRPCDALELAKKAVLASKQAASLAKDYELFGADSHESFLP 191
Query: 263 ELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEISSLRTTDKHHKT-SL 87
+L P N I P +E VRS RLLERQSK+R P+ ++ E S+ R +D H K
Sbjct: 192 DLEPRNLANKI-PLREEVAVRSKRLLERQSKRRWIPRPKVVVSEASTSRKSDIHKKIHEG 250
Query: 86 IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
D +DPLRLFL G E +QLLT KEE EL
Sbjct: 251 FDTNDPLRLFLWGPETKQLLTPKEESEL 278
>ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X3 [Nelumbo nucifera]
Length = 540
Score = 164 bits (416), Expect = 5e-38
Identities = 113/253 (44%), Positives = 148/253 (58%), Gaps = 9/253 (3%)
Frame = -1
Query: 734 VAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQID 561
V +LHE TRHFPASVL QEQRDD+R L + RE+K + LDR +++
Sbjct: 2 VTLLHEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLE 61
Query: 560 NDTSLNQEKRERGSEASDKYLKDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDA 384
+ L +EK+ S D+Y + FERQLLY PGLWYL P + E S+ QS ++
Sbjct: 62 DKVHLYEEKK---SCQPDRYWEGFERQLLYWPGLWYLLPSLYKGEKPLLSMVTQSTAAGT 118
Query: 383 DEELHVKACDLLALAKQAVLVSKQASSL-----IVASNSHLHNANELIPSFGMNDISPPE 219
+ + V+ CD L LAK+AVL SKQA+SL + ++SH +L P N I P
Sbjct: 119 VKNVDVRPCDALELAKKAVLASKQAASLAKDYELFGADSHESFLPDLEPRNLANKI-PLR 177
Query: 218 KEKIVRSTRLLERQSKKRRAPKSALLGDEISSLRTTDKHHKT-SLIDLSDPLRLFLSGAE 42
+E VRS RLLERQSK+R P+ ++ E S+ R +D H K D +DPLRLFL G E
Sbjct: 178 EEVAVRSKRLLERQSKRRWIPRPKVVVSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPE 237
Query: 41 ARQLLTAKEEKEL 3
+QLLT KEE EL
Sbjct: 238 TKQLLTPKEESEL 250
>ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X4 [Nelumbo nucifera]
Length = 525
Score = 162 bits (409), Expect = 3e-37
Identities = 108/232 (46%), Positives = 142/232 (61%), Gaps = 9/232 (3%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 498
RHFPASVL QEQRDD+R L + RE+K + LDR ++++ L +EK+ S D+Y
Sbjct: 8 RHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDKVHLYEEKK---SCQPDRYW 64
Query: 497 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 321
+ FERQLLY PGLWYL P + E S+ QS ++ + + V+ CD L LAK+AVL
Sbjct: 65 EGFERQLLYWPGLWYLLPSLYKGEKPLLSMVTQSTAAGTVKNVDVRPCDALELAKKAVLA 124
Query: 320 SKQASSL-----IVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAP 156
SKQA+SL + ++SH +L P N I P +E VRS RLLERQSK+R P
Sbjct: 125 SKQAASLAKDYELFGADSHESFLPDLEPRNLANKI-PLREEVAVRSKRLLERQSKRRWIP 183
Query: 155 KSALLGDEISSLRTTDKHHKT-SLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
+ ++ E S+ R +D H K D +DPLRLFL G E +QLLT KEE EL
Sbjct: 184 RPKVVVSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLTPKEESEL 235
>ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Vitis
vinifera]
Length = 567
Score = 152 bits (384), Expect = 3e-34
Identities = 106/231 (45%), Positives = 142/231 (61%), Gaps = 8/231 (3%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSLLH-LREEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 498
R FP SVL QEQRD+ R L++E+ ++ L++ Q++ S ++E S+ ++Y+
Sbjct: 53 RKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIVVSADEEN----SDDHNQYM 108
Query: 497 KDFERQLLYSPGLWYLSPPSQRENKA--SSLDMQSMSSDADEELHVKACDLLALAKQAVL 324
+FERQLL PGLWY P SQ K+ SS M+S+++D + + VK CD+LALAK+A+
Sbjct: 109 VNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALS 168
Query: 323 VSKQASSLIVASNSHLHNAN-ELIPSFGMNDISPPE---KEKIVRSTRLLERQSKKRRAP 156
SKQA SL N+ L A+ E PS + IS P +EK VRSTRLLER+SKKRR P
Sbjct: 169 ASKQAVSLY--ENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKRRNP 226
Query: 155 KSALLGDEISSLRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
K A + + S R + D DPLRLFL G E R+LLTAKEE EL
Sbjct: 227 KVA-VHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESEL 276
>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 152 bits (384), Expect = 3e-34
Identities = 106/231 (45%), Positives = 142/231 (61%), Gaps = 8/231 (3%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSLLH-LREEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 498
R FP SVL QEQRD+ R L++E+ ++ L++ Q++ S ++E S+ ++Y+
Sbjct: 47 RKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIVVSADEEN----SDDHNQYM 102
Query: 497 KDFERQLLYSPGLWYLSPPSQRENKA--SSLDMQSMSSDADEELHVKACDLLALAKQAVL 324
+FERQLL PGLWY P SQ K+ SS M+S+++D + + VK CD+LALAK+A+
Sbjct: 103 VNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALS 162
Query: 323 VSKQASSLIVASNSHLHNAN-ELIPSFGMNDISPPE---KEKIVRSTRLLERQSKKRRAP 156
SKQA SL N+ L A+ E PS + IS P +EK VRSTRLLER+SKKRR P
Sbjct: 163 ASKQAVSLY--ENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKRRNP 220
Query: 155 KSALLGDEISSLRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
K A + + S R + D DPLRLFL G E R+LLTAKEE EL
Sbjct: 221 KVA-VHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESEL 270
>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530789|gb|ESR41972.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 561
Score = 144 bits (362), Expect = 9e-32
Identities = 98/227 (43%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 498
RHFP SVL QEQRD+ R LLH+ +E+K + D ++ + +EK S D+ +
Sbjct: 49 RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLV 105
Query: 497 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 321
+D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+
Sbjct: 106 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 165
Query: 320 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 141
SK+A+SL A N L+ A S + P E+ K VRSTR LER+SKKR+ K +
Sbjct: 166 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVT 223
Query: 140 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
E + R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 224 NHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFEL 270
>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530788|gb|ESR41971.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 569
Score = 144 bits (362), Expect = 9e-32
Identities = 98/227 (43%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 498
RHFP SVL QEQRD+ R LLH+ +E+K + D ++ + +EK S D+ +
Sbjct: 57 RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLV 113
Query: 497 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 321
+D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+
Sbjct: 114 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 173
Query: 320 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 141
SK+A+SL A N L+ A S + P E+ K VRSTR LER+SKKR+ K +
Sbjct: 174 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVT 231
Query: 140 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
E + R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 232 NHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFEL 278
>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530787|gb|ESR41970.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 558
Score = 144 bits (362), Expect = 9e-32
Identities = 98/227 (43%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 498
RHFP SVL QEQRD+ R LLH+ +E+K + D ++ + +EK S D+ +
Sbjct: 46 RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLV 102
Query: 497 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 321
+D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+
Sbjct: 103 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 162
Query: 320 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 141
SK+A+SL A N L+ A S + P E+ K VRSTR LER+SKKR+ K +
Sbjct: 163 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVT 220
Query: 140 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
E + R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 221 NHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFEL 267
>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X3 [Citrus sinensis]
Length = 561
Score = 142 bits (359), Expect = 2e-31
Identities = 97/227 (42%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 498
RHFP SVL QEQRD+ R LLH+ +E+K + D ++ + +EK S D+ +
Sbjct: 49 RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLV 105
Query: 497 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 321
+D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+
Sbjct: 106 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 165
Query: 320 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 141
SK+A+SL A N L+ A S + P E+ K VRST+ LER+SKKR+ K +
Sbjct: 166 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVT 223
Query: 140 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
E + R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 224 NHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 270
>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Citrus sinensis]
Length = 569
Score = 142 bits (359), Expect = 2e-31
Identities = 97/227 (42%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 498
RHFP SVL QEQRD+ R LLH+ +E+K + D ++ + +EK S D+ +
Sbjct: 57 RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLV 113
Query: 497 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 321
+D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+
Sbjct: 114 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 173
Query: 320 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 141
SK+A+SL A N L+ A S + P E+ K VRST+ LER+SKKR+ K +
Sbjct: 174 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVT 231
Query: 140 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
E + R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 232 NHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 278
>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 570
Score = 142 bits (359), Expect = 2e-31
Identities = 97/227 (42%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 498
RHFP SVL QEQRD+ R LLH+ +E+K + D ++ + +EK S D+ +
Sbjct: 58 RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLV 114
Query: 497 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 321
+D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+
Sbjct: 115 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 174
Query: 320 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 141
SK+A+SL A N L+ A S + P E+ K VRST+ LER+SKKR+ K +
Sbjct: 175 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVT 232
Query: 140 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
E + R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 233 NHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 279
>ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
gi|508715981|gb|EOY07878.1| RNA polymerase sigma factor
rpoD, putative [Theobroma cacao]
Length = 568
Score = 142 bits (359), Expect = 2e-31
Identities = 108/255 (42%), Positives = 146/255 (57%), Gaps = 10/255 (3%)
Frame = -1
Query: 737 SVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQRDDLRSL--LHL-REEKPYKTALDRT 570
SV + HE RHFP SVL QEQRDD R L LH +E+K Y A D+
Sbjct: 31 SVLMFHEQAAPAATSIPITSVARHFPTSVLLQEQRDDYRPLPVLHFFKEDKAYPGATDKQ 90
Query: 569 QIDNDTSLNQEKRERGSEASDKYLK-DFERQLLYSPGLWYL-SPPSQRENKASSLDMQSM 396
QI+N SLN+E AS+ + + FE++LL P L L S EN +S+ +MQS+
Sbjct: 91 QIENGASLNEEN------ASNNFGQLGFEKKLLQWPDLTQLLSLLESEENPSSTSNMQSV 144
Query: 395 SSDADEELHVKACDLLALAKQAVLVSKQASSLIVASNSHLHNANELIPSFGMNDIS--PP 222
++D E + V+ +++ALAK+A+ SKQA+SL + + L + L S G + P
Sbjct: 145 AADTKEIVDVEPSNIVALAKKALSASKQAASL--SEDLKLDLDDSLSNSLGSANSCTLPV 202
Query: 221 EKEKIV--RSTRLLERQSKKRRAPKSALLGDEISSLRTTDKHHKTSLIDLSDPLRLFLSG 48
EKE++V RSTR LERQSK+RR + + SS RT + + D +DPLRLFL G
Sbjct: 203 EKEEVVTVRSTRRLERQSKRRRVQPKVTIRETYSSRRTDVRRKLSEGFDPNDPLRLFLWG 262
Query: 47 AEARQLLTAKEEKEL 3
E +QLLTAKEE EL
Sbjct: 263 PETKQLLTAKEESEL 277
>ref|XP_012485938.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Gossypium raimondii]
Length = 562
Score = 142 bits (358), Expect = 3e-31
Identities = 100/231 (43%), Positives = 136/231 (58%), Gaps = 8/231 (3%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSL---LHLREEKPYKTALDRTQIDNDTSLNQEKRERGSEASDK 504
RHFP SVL QEQRDD R L + +E+K Y D+ Q++N T+L++ K
Sbjct: 54 RHFPTSVLSQEQRDDCRPLPILQYFKEDKAYPGPTDKQQVENGTTLHEGKASN------- 106
Query: 503 YLKDFERQLLYSPGLWYLSPPSQRENKASSLDMQSMSSDADEELHVKACDLLALAKQAVL 324
+FE+Q+L P L LS EN +SSL+MQS+++D +E ++V+ +LALAK A+
Sbjct: 107 ---NFEQQMLQWPDL-RLSVLELGENPSSSLNMQSVAADTEETMNVEPSTILALAKNALS 162
Query: 323 VSKQASSLIVASNSHLHNANELIPSFGMNDIS--PPEKEKI--VRSTRLLERQSKKRRAP 156
SKQA L +A + L + L S G + S P E+E+ VRSTR LERQSK+RR P
Sbjct: 163 ASKQA--LALAEDLKLDLDDSLSNSLGSANSSTLPVEEEEAPTVRSTRRLERQSKRRRMP 220
Query: 155 KSALLGDEISSLRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
++ D S +T + + D +DPLRLFL G E QLLTAKEE EL
Sbjct: 221 SKFMISDTYSLRKTNVRKKVSGSYDPNDPLRLFLRGPETTQLLTAKEESEL 271
>gb|KJB36543.1| hypothetical protein B456_006G165200 [Gossypium raimondii]
Length = 411
Score = 142 bits (357), Expect = 3e-31
Identities = 100/232 (43%), Positives = 136/232 (58%), Gaps = 9/232 (3%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSL---LHLREEKPYKTALDRTQIDNDTSLNQEKRERGSEASDK 504
RHFP SVL QEQRDD R L + +E+K Y D+ Q++N T+L++ K
Sbjct: 54 RHFPTSVLSQEQRDDCRPLPILQYFKEDKAYPGPTDKQQVENGTTLHEGKASN------- 106
Query: 503 YLKDFERQLLYSPGL-WYLSPPSQRENKASSLDMQSMSSDADEELHVKACDLLALAKQAV 327
+FE+Q+L P L LS EN +SSL+MQS+++D +E ++V+ +LALAK A+
Sbjct: 107 ---NFEQQMLQWPDLRQLLSVLELGENPSSSLNMQSVAADTEETMNVEPSTILALAKNAL 163
Query: 326 LVSKQASSLIVASNSHLHNANELIPSFGMNDIS--PPEKEKI--VRSTRLLERQSKKRRA 159
SKQA L +A + L + L S G + S P E+E+ VRSTR LERQSK+RR
Sbjct: 164 SASKQA--LALAEDLKLDLDDSLSNSLGSANSSTLPVEEEEAPTVRSTRRLERQSKRRRM 221
Query: 158 PKSALLGDEISSLRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
P ++ D S +T + + D +DPLRLFL G E QLLTAKEE EL
Sbjct: 222 PSKFMISDTYSLRKTNVRKKVSGSYDPNDPLRLFLRGPETTQLLTAKEESEL 273
>ref|XP_012485937.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Gossypium raimondii]
gi|763769326|gb|KJB36541.1| hypothetical protein
B456_006G165200 [Gossypium raimondii]
Length = 564
Score = 142 bits (357), Expect = 3e-31
Identities = 100/232 (43%), Positives = 136/232 (58%), Gaps = 9/232 (3%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSL---LHLREEKPYKTALDRTQIDNDTSLNQEKRERGSEASDK 504
RHFP SVL QEQRDD R L + +E+K Y D+ Q++N T+L++ K
Sbjct: 54 RHFPTSVLSQEQRDDCRPLPILQYFKEDKAYPGPTDKQQVENGTTLHEGKASN------- 106
Query: 503 YLKDFERQLLYSPGL-WYLSPPSQRENKASSLDMQSMSSDADEELHVKACDLLALAKQAV 327
+FE+Q+L P L LS EN +SSL+MQS+++D +E ++V+ +LALAK A+
Sbjct: 107 ---NFEQQMLQWPDLRQLLSVLELGENPSSSLNMQSVAADTEETMNVEPSTILALAKNAL 163
Query: 326 LVSKQASSLIVASNSHLHNANELIPSFGMNDIS--PPEKEKI--VRSTRLLERQSKKRRA 159
SKQA L +A + L + L S G + S P E+E+ VRSTR LERQSK+RR
Sbjct: 164 SASKQA--LALAEDLKLDLDDSLSNSLGSANSSTLPVEEEEAPTVRSTRRLERQSKRRRM 221
Query: 158 PKSALLGDEISSLRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
P ++ D S +T + + D +DPLRLFL G E QLLTAKEE EL
Sbjct: 222 PSKFMISDTYSLRKTNVRKKVSGSYDPNDPLRLFLRGPETTQLLTAKEESEL 273
>gb|KHG01807.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
Length = 564
Score = 141 bits (355), Expect = 6e-31
Identities = 99/232 (42%), Positives = 135/232 (58%), Gaps = 9/232 (3%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSL---LHLREEKPYKTALDRTQIDNDTSLNQEKRERGSEASDK 504
RHFP SVL QEQRDD R L + +E+K Y D+ Q++N T+L++EK
Sbjct: 54 RHFPTSVLSQEQRDDCRPLPILQYFKEDKAYPGPTDKQQVENGTTLHEEKASN------- 106
Query: 503 YLKDFERQLLYSPGL-WYLSPPSQRENKASSLDMQSMSSDADEELHVKACDLLALAKQAV 327
+FE+Q+L P L LS EN +SSL MQS+++D +E ++V+ +LALAK A+
Sbjct: 107 ---NFEQQMLQWPDLRQLLSVLELGENPSSSLYMQSVAADTEEIMNVEPSTILALAKNAL 163
Query: 326 LVSKQASSLIVASNSHLHNANELIPSFGM-NDISPPEKEK---IVRSTRLLERQSKKRRA 159
SKQA L +A + L + + S G N + P +E VRSTR LERQSK+RR
Sbjct: 164 SASKQA--LALAEDLKLDLDDSISNSLGSANSFTLPVEEDEAPTVRSTRRLERQSKRRRI 221
Query: 158 PKSALLGDEISSLRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
P ++ + SS +T + + D +DPLRLFL G E QLLTAKEE EL
Sbjct: 222 PSKFMISETYSSRKTNVRKKASGSYDPNDPLRLFLRGPETTQLLTAKEESEL 273
>gb|KDO48082.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
Length = 532
Score = 136 bits (343), Expect = 1e-29
Identities = 95/227 (41%), Positives = 130/227 (57%), Gaps = 4/227 (1%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 498
RHFP SVL QEQRD+ R LLH+ +E+K + D I+ + +EK S D+ +
Sbjct: 20 RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKN---SGDLDQLV 76
Query: 497 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 321
+D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+
Sbjct: 77 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 136
Query: 320 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 141
SK+A+SL A N L+ A S + P E+ K R LER+SKKR+ K +
Sbjct: 137 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKQFSQPRFLERRSKKRKVSKPQVT 194
Query: 140 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
E + R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 195 NHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 241
>gb|KDO48081.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
Length = 378
Score = 136 bits (343), Expect = 1e-29
Identities = 95/227 (41%), Positives = 130/227 (57%), Gaps = 4/227 (1%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 498
RHFP SVL QEQRD+ R LLH+ +E+K + D I+ + +EK S D+ +
Sbjct: 57 RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKN---SGDLDQLV 113
Query: 497 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 321
+D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+
Sbjct: 114 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 173
Query: 320 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 141
SK+A+SL A N L+ A S + P E+ K R LER+SKKR+ K +
Sbjct: 174 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKQFSQPRFLERRSKKRKVSKPQVT 231
Query: 140 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
E + R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 232 NHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 278
>gb|KDO48080.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
Length = 361
Score = 136 bits (343), Expect = 1e-29
Identities = 95/227 (41%), Positives = 130/227 (57%), Gaps = 4/227 (1%)
Frame = -1
Query: 671 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 498
RHFP SVL QEQRD+ R LLH+ +E+K + D I+ + +EK S D+ +
Sbjct: 57 RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKN---SGDLDQLV 113
Query: 497 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 321
+D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+
Sbjct: 114 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 173
Query: 320 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 141
SK+A+SL A N L+ A S + P E+ K R LER+SKKR+ K +
Sbjct: 174 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKQFSQPRFLERRSKKRKVSKPQVT 231
Query: 140 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
E + R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 232 NHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 278