BLASTX nr result
ID: Papaver29_contig00016181
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00016181
(939 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010917922.1| PREDICTED: replication factor C subunit 1 is... 127 7e-53
ref|XP_010917920.1| PREDICTED: replication factor C subunit 1 is... 126 2e-52
ref|XP_010917923.1| PREDICTED: replication factor C subunit 1 is... 126 2e-52
gb|EPS67744.1| hypothetical protein M569_07025, partial [Genlise... 106 3e-52
ref|XP_013455697.1| replication factor C1 [Medicago truncatula] ... 158 6e-45
ref|XP_013455696.1| replication factor C1 [Medicago truncatula] ... 158 6e-45
gb|ABK25455.1| unknown [Picea sitchensis] 100 3e-38
ref|XP_010248015.1| PREDICTED: replication factor C subunit 1 is... 164 1e-37
ref|XP_010248008.1| PREDICTED: replication factor C subunit 1 is... 164 1e-37
ref|XP_003060942.1| predicted protein [Micromonas pusilla CCMP15... 78 1e-35
ref|XP_011401457.1| Replication factor C subunit 1 [Auxenochlore... 82 5e-34
ref|XP_012855762.1| PREDICTED: replication factor C subunit 1 [E... 119 2e-30
ref|XP_010323198.1| PREDICTED: replication factor C subunit 1 is... 111 3e-30
ref|XP_004242616.1| PREDICTED: replication factor C subunit 1 is... 111 3e-30
ref|XP_010094821.1| Replication factor C subunit 1 [Morus notabi... 113 5e-30
ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma ca... 116 7e-30
ref|XP_009396469.1| PREDICTED: replication factor C subunit 1 is... 137 9e-30
ref|XP_009396468.1| PREDICTED: replication factor C subunit 1 is... 137 9e-30
ref|XP_009396464.1| PREDICTED: replication factor C subunit 1 is... 137 9e-30
ref|XP_009626889.1| PREDICTED: replication factor C subunit 1 is... 109 1e-29
>ref|XP_010917922.1| PREDICTED: replication factor C subunit 1 isoform X2 [Elaeis
guineensis]
Length = 981
Score = 127 bits (319), Expect(2) = 7e-53
Identities = 74/149 (49%), Positives = 93/149 (62%), Gaps = 7/149 (4%)
Frame = +3
Query: 120 RKSQRARTA---FLTEDGLLDLIHKSKPTKTPPQDLKNTQDKGATSQP-KGSPLKVVKGN 287
RKS +A+ FLTEDGL D+I KSKP K Q+ Q K P K +PLKV +
Sbjct: 271 RKSSKAKELGIPFLTEDGLFDMIRKSKPAKAHVQE---EQKKKVEKSPIKSTPLKVEAKD 327
Query: 288 EVSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPL---LHE 458
V S +K K G SP K + Q+ SSLTW EKY+PK P+DI+G+Q L LH+
Sbjct: 328 RVG-SGGRKDAAKIVKSGTSPGKPKIQSTDRSSLTWTEKYRPKVPNDIIGNQSLVKQLHD 386
Query: 459 WLSHWNDHFLHTGQQGKGKKQNDNGAKKS 545
WL HWN+ FLHT Q+GKGKKQ D+G+KK+
Sbjct: 387 WLIHWNEQFLHTDQKGKGKKQADSGSKKA 415
Score = 108 bits (271), Expect(2) = 7e-53
Identities = 56/89 (62%), Positives = 68/89 (76%)
Frame = +1
Query: 538 KKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKADSKILKGIGGSMANSIKEL 717
KKAVL+SGSP IGKSTSAKLVS+ LGFQ IEVNASD+RGKAD+KI+KG+GG+ +NSIKEL
Sbjct: 413 KKAVLLSGSPGIGKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKEL 472
Query: 718 VSNESFSANTKFSCALTWEKQKDLTM*ID 804
+SNE+ SC W K + +D
Sbjct: 473 ISNEA------LSCGKNWSKHPKSVLIMD 495
Score = 80.1 bits (196), Expect = 2e-12
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELGL 144
SLEREEAEDL+K HGGRVTGSVS +T++LLADEDIG +KS KAKELG+
Sbjct: 234 SLEREEAEDLIKHHGGRVTGSVSKRTSFLLADEDIGGRKSSKAKELGI 281
>ref|XP_010917920.1| PREDICTED: replication factor C subunit 1 isoform X1 [Elaeis
guineensis] gi|743775094|ref|XP_010917921.1| PREDICTED:
replication factor C subunit 1 isoform X1 [Elaeis
guineensis]
Length = 982
Score = 126 bits (316), Expect(2) = 2e-52
Identities = 73/149 (48%), Positives = 92/149 (61%), Gaps = 7/149 (4%)
Frame = +3
Query: 120 RKSQRARTA---FLTEDGLLDLIHKSKPTKTPPQDLKNTQDKGATSQP-KGSPLKVVKGN 287
RKS +A+ FLTEDGL D+I KSKP K Q+ Q K P K +PLKV
Sbjct: 271 RKSSKAKELGIPFLTEDGLFDMIRKSKPAKAHVQE---EQKKKVEKSPIKSTPLKVEAKV 327
Query: 288 EVSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPL---LHE 458
+ S +K K G SP K + Q+ SSLTW EKY+PK P+DI+G+Q L LH+
Sbjct: 328 DRVGSGGRKDAAKIVKSGTSPGKPKIQSTDRSSLTWTEKYRPKVPNDIIGNQSLVKQLHD 387
Query: 459 WLSHWNDHFLHTGQQGKGKKQNDNGAKKS 545
WL HWN+ FLHT Q+GKGKKQ D+G+KK+
Sbjct: 388 WLIHWNEQFLHTDQKGKGKKQADSGSKKA 416
Score = 108 bits (271), Expect(2) = 2e-52
Identities = 56/89 (62%), Positives = 68/89 (76%)
Frame = +1
Query: 538 KKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKADSKILKGIGGSMANSIKEL 717
KKAVL+SGSP IGKSTSAKLVS+ LGFQ IEVNASD+RGKAD+KI+KG+GG+ +NSIKEL
Sbjct: 414 KKAVLLSGSPGIGKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKEL 473
Query: 718 VSNESFSANTKFSCALTWEKQKDLTM*ID 804
+SNE+ SC W K + +D
Sbjct: 474 ISNEA------LSCGKNWSKHPKSVLIMD 496
Score = 80.1 bits (196), Expect = 2e-12
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELGL 144
SLEREEAEDL+K HGGRVTGSVS +T++LLADEDIG +KS KAKELG+
Sbjct: 234 SLEREEAEDLIKHHGGRVTGSVSKRTSFLLADEDIGGRKSSKAKELGI 281
>ref|XP_010917923.1| PREDICTED: replication factor C subunit 1 isoform X3 [Elaeis
guineensis]
Length = 813
Score = 126 bits (316), Expect(2) = 2e-52
Identities = 73/149 (48%), Positives = 92/149 (61%), Gaps = 7/149 (4%)
Frame = +3
Query: 120 RKSQRARTA---FLTEDGLLDLIHKSKPTKTPPQDLKNTQDKGATSQP-KGSPLKVVKGN 287
RKS +A+ FLTEDGL D+I KSKP K Q+ Q K P K +PLKV
Sbjct: 271 RKSSKAKELGIPFLTEDGLFDMIRKSKPAKAHVQE---EQKKKVEKSPIKSTPLKVEAKV 327
Query: 288 EVSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPL---LHE 458
+ S +K K G SP K + Q+ SSLTW EKY+PK P+DI+G+Q L LH+
Sbjct: 328 DRVGSGGRKDAAKIVKSGTSPGKPKIQSTDRSSLTWTEKYRPKVPNDIIGNQSLVKQLHD 387
Query: 459 WLSHWNDHFLHTGQQGKGKKQNDNGAKKS 545
WL HWN+ FLHT Q+GKGKKQ D+G+KK+
Sbjct: 388 WLIHWNEQFLHTDQKGKGKKQADSGSKKA 416
Score = 108 bits (271), Expect(2) = 2e-52
Identities = 56/89 (62%), Positives = 68/89 (76%)
Frame = +1
Query: 538 KKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKADSKILKGIGGSMANSIKEL 717
KKAVL+SGSP IGKSTSAKLVS+ LGFQ IEVNASD+RGKAD+KI+KG+GG+ +NSIKEL
Sbjct: 414 KKAVLLSGSPGIGKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKEL 473
Query: 718 VSNESFSANTKFSCALTWEKQKDLTM*ID 804
+SNE+ SC W K + +D
Sbjct: 474 ISNEA------LSCGKNWSKHPKSVLIMD 496
Score = 80.1 bits (196), Expect = 2e-12
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELGL 144
SLEREEAEDL+K HGGRVTGSVS +T++LLADEDIG +KS KAKELG+
Sbjct: 234 SLEREEAEDLIKHHGGRVTGSVSKRTSFLLADEDIGGRKSSKAKELGI 281
>gb|EPS67744.1| hypothetical protein M569_07025, partial [Genlisea aurea]
Length = 888
Score = 106 bits (264), Expect(3) = 3e-52
Identities = 55/73 (75%), Positives = 64/73 (87%)
Frame = +1
Query: 538 KKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKADSKILKGIGGSMANSIKEL 717
KK+VL+SG+P IGK+TSAKLVS+ LGFQ IEVNASDSRGKAD+KI KGIGGS +NSIKEL
Sbjct: 388 KKSVLLSGTPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADAKIGKGIGGSTSNSIKEL 447
Query: 718 VSNESFSANTKFS 756
VSNE+ S N + S
Sbjct: 448 VSNEALSLNMERS 460
Score = 102 bits (255), Expect(3) = 3e-52
Identities = 67/149 (44%), Positives = 86/149 (57%), Gaps = 7/149 (4%)
Frame = +3
Query: 120 RKSQRAR---TAFLTEDGLLDLIHKSKPTKTPPQDLKNTQDKGATSQPKGSPLKVVKGNE 290
RKS +A+ TAFLTEDGL D+I S +K Q K D S PK S K VK
Sbjct: 253 RKSSKAKELGTAFLTEDGLFDIIRASNSSKASVQGSKKPVDSIVISSPKESLQKPVK--- 309
Query: 291 VSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSS-LTWPEKYKPKSPDDILGDQPL---LHE 458
SL++K P V+P+ + S L W EKYKPK +DI+G+Q L LH+
Sbjct: 310 --TSLDEKRKPS-----VAPSSNKKSGPAVQSWLPWTEKYKPKVLNDIVGNQSLVKQLHD 362
Query: 459 WLSHWNDHFLHTGQQGKGKKQNDNGAKKS 545
WL W++ FL+TG++GKGK+QN GAKKS
Sbjct: 363 WLKSWDEQFLNTGKKGKGKQQNP-GAKKS 390
Score = 46.2 bits (108), Expect(3) = 3e-52
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +3
Query: 810 RSKQQKTVLIMDEVDGMSSGDRCGVADL 893
RS KTVLIMDEVDGMS GDR GVADL
Sbjct: 459 RSDHPKTVLIMDEVDGMSGGDRGGVADL 486
Score = 84.0 bits (206), Expect = 2e-13
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELG 141
SLEREEAEDL+KRHGGRVTGS+S KTNYLL DEDIG +KS KAKELG
Sbjct: 216 SLEREEAEDLIKRHGGRVTGSISKKTNYLLCDEDIGGRKSSKAKELG 262
>ref|XP_013455697.1| replication factor C1 [Medicago truncatula]
gi|657387628|gb|KEH29728.1| replication factor C1
[Medicago truncatula]
Length = 1016
Score = 158 bits (400), Expect(2) = 6e-45
Identities = 115/271 (42%), Positives = 143/271 (52%), Gaps = 23/271 (8%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKEL--------GLHS*L 156
SLEREEAEDL+KRHGGRVTGSVS KTNYLL D+DIG +KSEKAKEL GL +
Sbjct: 282 SLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDDDIGGRKSEKAKELGTSFLTEDGLFDMI 341
Query: 157 RM----------DCST*FINQNPRKHPHKI*KILKTRVL-----PRNQKEAL*K**KVMK 291
R +C P P K+ +T+ P NQ + K +
Sbjct: 342 RASKPAKAPKQEECKKSVTKAVPVPSPSKVLPKAETKASLPSYSPSNQAKP--KKAATAQ 399
Query: 292 SRSLWXXXXXXXXXXXXFLLLSGEPKLVVIPH*HGQKSTNRRVRMIFWATSHFFTSGCPT 471
S +W PK ++ G +S ++R F++
Sbjct: 400 SNLMWTEKHRPK-----------NPKDII-----GNQSLVAQLRTWLKGWHEQFSN---- 439
Query: 472 GMITFYILGSREREKNRMTMELKKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSR 651
G ++ K + KKAVL+SG+P IGK+TSAKLV ++LGFQ IEVNASDSR
Sbjct: 440 -------TGGNKKGKKQNDPASKKAVLLSGTPGIGKTTSAKLVCQELGFQAIEVNASDSR 492
Query: 652 GKADSKILKGIGGSMANSIKELVSNESFSAN 744
GKADSKI KGI GS ANSIKELV+NE+ N
Sbjct: 493 GKADSKIEKGISGSNANSIKELVTNEALGRN 523
Score = 51.2 bits (121), Expect(2) = 6e-45
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +3
Query: 810 RSKQQKTVLIMDEVDGMSSGDRCGVADL 893
RSKQ KTVLIMDEVDGMS+GDR GVADL
Sbjct: 526 RSKQSKTVLIMDEVDGMSAGDRGGVADL 553
>ref|XP_013455696.1| replication factor C1 [Medicago truncatula]
gi|657387627|gb|KEH29727.1| replication factor C1
[Medicago truncatula]
Length = 988
Score = 158 bits (400), Expect(2) = 6e-45
Identities = 115/271 (42%), Positives = 143/271 (52%), Gaps = 23/271 (8%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKEL--------GLHS*L 156
SLEREEAEDL+KRHGGRVTGSVS KTNYLL D+DIG +KSEKAKEL GL +
Sbjct: 253 SLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDDDIGGRKSEKAKELGTSFLTEDGLFDMI 312
Query: 157 RM----------DCST*FINQNPRKHPHKI*KILKTRVL-----PRNQKEAL*K**KVMK 291
R +C P P K+ +T+ P NQ + K +
Sbjct: 313 RASKPAKAPKQEECKKSVTKAVPVPSPSKVLPKAETKASLPSYSPSNQAKP--KKAATAQ 370
Query: 292 SRSLWXXXXXXXXXXXXFLLLSGEPKLVVIPH*HGQKSTNRRVRMIFWATSHFFTSGCPT 471
S +W PK ++ G +S ++R F++
Sbjct: 371 SNLMWTEKHRPK-----------NPKDII-----GNQSLVAQLRTWLKGWHEQFSN---- 410
Query: 472 GMITFYILGSREREKNRMTMELKKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSR 651
G ++ K + KKAVL+SG+P IGK+TSAKLV ++LGFQ IEVNASDSR
Sbjct: 411 -------TGGNKKGKKQNDPASKKAVLLSGTPGIGKTTSAKLVCQELGFQAIEVNASDSR 463
Query: 652 GKADSKILKGIGGSMANSIKELVSNESFSAN 744
GKADSKI KGI GS ANSIKELV+NE+ N
Sbjct: 464 GKADSKIEKGISGSNANSIKELVTNEALGRN 494
Score = 51.2 bits (121), Expect(2) = 6e-45
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +3
Query: 810 RSKQQKTVLIMDEVDGMSSGDRCGVADL 893
RSKQ KTVLIMDEVDGMS+GDR GVADL
Sbjct: 497 RSKQSKTVLIMDEVDGMSAGDRGGVADL 524
>gb|ABK25455.1| unknown [Picea sitchensis]
Length = 550
Score = 100 bits (248), Expect(3) = 3e-38
Identities = 50/67 (74%), Positives = 60/67 (89%)
Frame = +1
Query: 538 KKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKADSKILKGIGGSMANSIKEL 717
KKAVL+SG+P IGK+TSA+L+S+ LGF+ IEVNASDSRGKADSKI +G+ GS ANSIKE+
Sbjct: 59 KKAVLLSGTPGIGKTTSARLISQMLGFETIEVNASDSRGKADSKIERGMAGSTANSIKEM 118
Query: 718 VSNESFS 738
VSNES S
Sbjct: 119 VSNESLS 125
Score = 63.9 bits (154), Expect(3) = 3e-38
Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Frame = +3
Query: 393 WPEKYKPKSPDDILGDQPL---LHEWLSHWNDHFLHT-GQQGKGKKQ-----NDNGAKKS 545
W EKY+PK+PDDI+G+Q + +H+WL+HW++ LHT G++ KGKK+ + N +KK+
Sbjct: 2 WTEKYRPKTPDDIIGNQSIVKNIHDWLAHWDEQHLHTEGKESKGKKRGGGSVSSNASKKA 61
Score = 43.9 bits (102), Expect(3) = 3e-38
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +3
Query: 813 SKQQKTVLIMDEVDGMSSGDRCGVADL 893
SK+ K+VLIMDEVDGMS GDR GV+DL
Sbjct: 133 SKRGKSVLIMDEVDGMSGGDRGGVSDL 159
>ref|XP_010248015.1| PREDICTED: replication factor C subunit 1 isoform X2 [Nelumbo
nucifera]
Length = 974
Score = 164 bits (414), Expect = 1e-37
Identities = 113/266 (42%), Positives = 142/266 (53%), Gaps = 8/266 (3%)
Frame = +3
Query: 120 RKSQRAR---TAFLTEDGLLDLIHKSKPTKTPPQD--LKNTQDKGATSQPKGSPLKVVKG 284
RKS +A+ TAFLTEDGL DLI SKP K P ++ K T DK S PK SP KV +
Sbjct: 266 RKSTKAKELGTAFLTEDGLFDLIRASKPAKPPVREEPKKKTADKAVESLPKRSPKKVERK 325
Query: 285 NEVSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPL---LH 455
++ +L +K P SA GVS AK+ Q G S LTW EKY+PK P+DI+G+Q L LH
Sbjct: 326 DQGGSALARKVGPTNSASGVSLAKQNGQTVGHS-LTWTEKYRPKLPNDIIGNQSLVKQLH 384
Query: 456 EWLSHWNDHFLHTGQQGKGKKQNDNGAKKSRIDKWIT*HWKEYISKIG*REAWFPGHRGQ 635
+WL++WN+ FLHT ++GKGKKQND GAKK+ + K +K+ + F
Sbjct: 385 DWLANWNEQFLHTAKKGKGKKQNDGGAKKAVLISGTPGIGKTTSAKVVSQMLGFQAIEVN 444
Query: 636 C**QPGKG*FENS*RNWWKHGKLYKRTCQQ*IFFSKYQIFMCAYLGETKRFNHVN*SSRS 815
GK K++K K + A R H
Sbjct: 445 ASDNRGKA-----------DAKIFKGIGGSTANSVKELVSNEALSANLDRSKH------- 486
Query: 816 KQQKTVLIMDEVDGMSSGDRCGVADL 893
KTVLIMDEVDGMS+GDR GVADL
Sbjct: 487 --SKTVLIMDEVDGMSAGDRGGVADL 510
Score = 85.5 bits (210), Expect = 5e-14
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELG 141
SLEREEAEDL+KRHGGRVTGSVS KTNYLLADEDIG +KS KAKELG
Sbjct: 229 SLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIGGRKSTKAKELG 275
>ref|XP_010248008.1| PREDICTED: replication factor C subunit 1 isoform X1 [Nelumbo
nucifera]
Length = 975
Score = 164 bits (414), Expect = 1e-37
Identities = 113/266 (42%), Positives = 142/266 (53%), Gaps = 8/266 (3%)
Frame = +3
Query: 120 RKSQRAR---TAFLTEDGLLDLIHKSKPTKTPPQD--LKNTQDKGATSQPKGSPLKVVKG 284
RKS +A+ TAFLTEDGL DLI SKP K P ++ K T DK S PK SP KV +
Sbjct: 267 RKSTKAKELGTAFLTEDGLFDLIRASKPAKPPVREEPKKKTADKAVESLPKRSPKKVERK 326
Query: 285 NEVSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPL---LH 455
++ +L +K P SA GVS AK+ Q G S LTW EKY+PK P+DI+G+Q L LH
Sbjct: 327 DQGGSALARKVGPTNSASGVSLAKQNGQTVGHS-LTWTEKYRPKLPNDIIGNQSLVKQLH 385
Query: 456 EWLSHWNDHFLHTGQQGKGKKQNDNGAKKSRIDKWIT*HWKEYISKIG*REAWFPGHRGQ 635
+WL++WN+ FLHT ++GKGKKQND GAKK+ + K +K+ + F
Sbjct: 386 DWLANWNEQFLHTAKKGKGKKQNDGGAKKAVLISGTPGIGKTTSAKVVSQMLGFQAIEVN 445
Query: 636 C**QPGKG*FENS*RNWWKHGKLYKRTCQQ*IFFSKYQIFMCAYLGETKRFNHVN*SSRS 815
GK K++K K + A R H
Sbjct: 446 ASDNRGKA-----------DAKIFKGIGGSTANSVKELVSNEALSANLDRSKH------- 487
Query: 816 KQQKTVLIMDEVDGMSSGDRCGVADL 893
KTVLIMDEVDGMS+GDR GVADL
Sbjct: 488 --SKTVLIMDEVDGMSAGDRGGVADL 511
Score = 85.5 bits (210), Expect = 5e-14
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELG 141
SLEREEAEDL+KRHGGRVTGSVS KTNYLLADEDIG +KS KAKELG
Sbjct: 230 SLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIGGRKSTKAKELG 276
>ref|XP_003060942.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457293|gb|EEH54592.1| predicted protein
[Micromonas pusilla CCMP1545]
Length = 949
Score = 78.2 bits (191), Expect(4) = 1e-35
Identities = 35/66 (53%), Positives = 54/66 (81%)
Frame = +1
Query: 541 KAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKADSKILKGIGGSMANSIKELV 720
KAVLISG P IGKS++A ++S++LGF+ EVNASD+RGK+ + I G+GG +N+++E+V
Sbjct: 420 KAVLISGPPGIGKSSAASIISKQLGFEVTEVNASDTRGKSSNDIRDGVGGKSSNAVREMV 479
Query: 721 SNESFS 738
+N++ S
Sbjct: 480 TNKAMS 485
Score = 62.4 bits (150), Expect(4) = 1e-35
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELG 141
SLER+EAED +KRHGG+VT +VS KT YLL D G+ K KAK +G
Sbjct: 237 SLERDEAEDFIKRHGGKVTSAVSGKTTYLLVGMDCGKSKYAKAKSVG 283
Score = 40.4 bits (93), Expect(4) = 1e-35
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3
Query: 822 QKTVLIMDEVDGMSSGDRCGVADL 893
+KTVLIMDEVDGMS GDR GV +L
Sbjct: 492 KKTVLIMDEVDGMSGGDRGGVMEL 515
Score = 38.1 bits (87), Expect(4) = 1e-35
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 9/140 (6%)
Frame = +3
Query: 123 KSQRARTAFLTEDGLLDLIHK------SKPTKTPPQDLKNTQDKGATSQPKGSPLKVVKG 284
K++ T + EDGL ++ P KT +++ G ++P+ P K
Sbjct: 278 KAKSVGTPLMDEDGLFAMVEALAEEAAKNPVKT---EVEMKPADGVEAKPEIVPAAAAKK 334
Query: 285 NEVSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPL---LH 455
S + P +A + A R + D+ L W KYKP P ++G+ L
Sbjct: 335 PAPSAAAAAAAAPSQAAAAAAGAASRPKKAEDTPL-WVNKYKPSQPAQLIGNGKNIADLR 393
Query: 456 EWLSHWNDHFLHTGQQGKGK 515
++L W+ LH G+ G K
Sbjct: 394 KFLQTWD--ALH-GKDGTAK 410
>ref|XP_011401457.1| Replication factor C subunit 1 [Auxenochlorella protothecoides]
gi|675356002|gb|KFM28442.1| Replication factor C subunit
1 [Auxenochlorella protothecoides]
Length = 1223
Score = 82.0 bits (201), Expect(4) = 5e-34
Identities = 39/70 (55%), Positives = 54/70 (77%)
Frame = +1
Query: 538 KKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKADSKILKGIGGSMANSIKEL 717
K+AVLISG P IGK+T+A + +LG + +EVNASD+R KAD+ LKG+GG +AN+IKEL
Sbjct: 323 KRAVLISGPPGIGKTTAALCLCRELGLRAVEVNASDTRSKADASALKGVGGKLANAIKEL 382
Query: 718 VSNESFSANT 747
+N + S +T
Sbjct: 383 TTNAAVSYST 392
Score = 53.5 bits (127), Expect(4) = 5e-34
Identities = 24/47 (51%), Positives = 35/47 (74%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELG 141
SL+REEAEDL++RHGG+VTG+VS +T++L+ + G K A+ G
Sbjct: 143 SLKREEAEDLIRRHGGKVTGNVSGRTSFLVIGQYAGRSKHAAAQAKG 189
Score = 40.0 bits (92), Expect(4) = 5e-34
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3
Query: 795 VN*SSRSKQQKTVLIMDEVDGMSSGDRCGVAD 890
V+ S+ + K LIMDEVDGMS+GDR GVAD
Sbjct: 388 VSYSTTGTRDKLCLIMDEVDGMSAGDRGGVAD 419
Score = 38.1 bits (87), Expect(4) = 5e-34
Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 17/146 (11%)
Frame = +3
Query: 126 SQRARTAFLTEDGLLDLIHKSKPTKTPPQDLKNTQDKGAT-------SQPKGSPLKVVKG 284
+Q T + E GLL L+ + + D GA S P +P +G
Sbjct: 185 AQAKGTPVIDEGGLLSLVEATVHLVSRSPDTARGAVSGAAPNAAAAASAPGSAPAPAPRG 244
Query: 285 NEVSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPL---LH 455
T P+ + +PA D SL W EK++PK+ +++G+ L L
Sbjct: 245 -----LAPPATTPRAAVALPAPA-------ADQSL-WVEKWRPKTTAELVGNNGLVATLR 291
Query: 456 EWLSHWNDHFLH-------TGQQGKG 512
+WL W LH G +GKG
Sbjct: 292 QWLREWEAVHLHGREPCGAAGARGKG 317
>ref|XP_012855762.1| PREDICTED: replication factor C subunit 1 [Erythranthe guttatus]
gi|604302553|gb|EYU22111.1| hypothetical protein
MIMGU_mgv1a000730mg [Erythranthe guttata]
Length = 1000
Score = 110 bits (276), Expect(2) = 2e-30
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = +1
Query: 484 FYILGSREREKNRMTMELKKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKAD 663
F G +E+ K + KKAVL+SG+P IGK+TSAKL+S+ LGFQ IEVNASDSRGKAD
Sbjct: 416 FLNTGKKEKGKKQSDSGPKKAVLLSGTPGIGKTTSAKLISQMLGFQAIEVNASDSRGKAD 475
Query: 664 SKILKGIGGSMANSIKELVSNESFS 738
+KI KGIGGS +NS+KELVSNES S
Sbjct: 476 AKIQKGIGGSTSNSVKELVSNESLS 500
Score = 50.4 bits (119), Expect(2) = 2e-30
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +3
Query: 810 RSKQQKTVLIMDEVDGMSSGDRCGVADL 893
R++QQKTVLIMDEVDGMS+GDR GVADL
Sbjct: 505 RTQQQKTVLIMDEVDGMSAGDRGGVADL 532
Score = 119 bits (297), Expect = 4e-24
Identities = 66/148 (44%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Frame = +3
Query: 120 RKSQRAR---TAFLTEDGLLDLIHKSKPTKTPPQDLKNTQDKGATSQPKGSPLKVVKGNE 290
RKS++A+ TAFLTEDGL D+I S +K Q DK AT PK SP K K +
Sbjct: 295 RKSEKAKELGTAFLTEDGLFDIIRSSNKSKPAAQVPNKRVDKVATPAPKKSPQKSEKTKQ 354
Query: 291 VSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPL---LHEW 461
+ KG + KR+ Q +SL W EKY+PK P+DI+G+Q L LH+W
Sbjct: 355 AG------SDTKGPVSVAASPKRKNQPAAQTSLPWTEKYRPKVPNDIVGNQSLVKQLHDW 408
Query: 462 LSHWNDHFLHTGQQGKGKKQNDNGAKKS 545
L WN+ FL+TG++ KGKKQ+D+G KK+
Sbjct: 409 LVSWNEQFLNTGKKEKGKKQSDSGPKKA 436
Score = 85.9 bits (211), Expect = 4e-14
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELG 141
SLEREEAEDL+KRHGGRVTGS+S KTNYLL DEDIG +KSEKAKELG
Sbjct: 258 SLEREEAEDLIKRHGGRVTGSISKKTNYLLCDEDIGGRKSEKAKELG 304
>ref|XP_010323198.1| PREDICTED: replication factor C subunit 1 isoform X1 [Solanum
lycopersicum]
Length = 1013
Score = 111 bits (278), Expect(2) = 3e-30
Identities = 61/87 (70%), Positives = 68/87 (78%)
Frame = +1
Query: 484 FYILGSREREKNRMTMELKKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKAD 663
F S+ + K + KKAVL+SG P IGK+TSAK+VS+ LGFQ IEVNASDSRGKAD
Sbjct: 426 FLKASSKGKGKKQADSGAKKAVLLSGMPGIGKTTSAKVVSQLLGFQTIEVNASDSRGKAD 485
Query: 664 SKILKGIGGSMANSIKELVSNESFSAN 744
SKI KGIGGS ANSIKELVSNES SAN
Sbjct: 486 SKIEKGIGGSTANSIKELVSNESLSAN 512
Score = 48.9 bits (115), Expect(2) = 3e-30
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +3
Query: 810 RSKQQKTVLIMDEVDGMSSGDRCGVADL 893
RS QKTVLIMDEVDGMS+GDR GVADL
Sbjct: 515 RSHHQKTVLIMDEVDGMSAGDRGGVADL 542
Score = 100 bits (248), Expect = 2e-18
Identities = 68/165 (41%), Positives = 97/165 (58%), Gaps = 21/165 (12%)
Frame = +3
Query: 114 EIRKSQRAR---TAFLTEDGLLDLIHKSKPTK--TPPQDLKNT--------QDKGATSQP 254
E RKS +A+ TAFLTEDGL +LI SK +K T P+ K+ ++ TS
Sbjct: 286 EGRKSSKAKELGTAFLTEDGLFELIRSSKKSKSATQPESKKSVDTIVSSGKRNSQKTSDG 345
Query: 255 KGSPL-KVVKGNEVSLSLEKK----TPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKS 419
GS K++ +++ S +P K SA SPAK++TQA +S L W EKY+PK+
Sbjct: 346 TGSTATKILAAKQLAPSASPAKISGSPAKSSA---SPAKKKTQAK-ESLLPWTEKYRPKA 401
Query: 420 PDDILGDQPLLHE---WLSHWNDHFLHTGQQGKGKKQNDNGAKKS 545
DI+G++ L+ + WL W++HFL +GKGKKQ D+GAKK+
Sbjct: 402 IVDIIGNKSLVEQIQRWLESWDEHFLKASSKGKGKKQADSGAKKA 446
Score = 78.6 bits (192), Expect = 7e-12
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELG 141
SLEREEAEDL+KRHGGRVTGSVS KT YLL DED+ +KS KAKELG
Sbjct: 251 SLEREEAEDLIKRHGGRVTGSVSKKTTYLLCDEDVEGRKSSKAKELG 297
>ref|XP_004242616.1| PREDICTED: replication factor C subunit 1 isoform X2 [Solanum
lycopersicum]
Length = 1012
Score = 111 bits (278), Expect(2) = 3e-30
Identities = 61/87 (70%), Positives = 68/87 (78%)
Frame = +1
Query: 484 FYILGSREREKNRMTMELKKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKAD 663
F S+ + K + KKAVL+SG P IGK+TSAK+VS+ LGFQ IEVNASDSRGKAD
Sbjct: 426 FLKASSKGKGKKQADSGAKKAVLLSGMPGIGKTTSAKVVSQLLGFQTIEVNASDSRGKAD 485
Query: 664 SKILKGIGGSMANSIKELVSNESFSAN 744
SKI KGIGGS ANSIKELVSNES SAN
Sbjct: 486 SKIEKGIGGSTANSIKELVSNESLSAN 512
Score = 48.9 bits (115), Expect(2) = 3e-30
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +3
Query: 810 RSKQQKTVLIMDEVDGMSSGDRCGVADL 893
RS QKTVLIMDEVDGMS+GDR GVADL
Sbjct: 515 RSHHQKTVLIMDEVDGMSAGDRGGVADL 542
Score = 100 bits (248), Expect = 2e-18
Identities = 68/165 (41%), Positives = 97/165 (58%), Gaps = 21/165 (12%)
Frame = +3
Query: 114 EIRKSQRAR---TAFLTEDGLLDLIHKSKPTK--TPPQDLKNT--------QDKGATSQP 254
E RKS +A+ TAFLTEDGL +LI SK +K T P+ K+ ++ TS
Sbjct: 286 EGRKSSKAKELGTAFLTEDGLFELIRSSKKSKSATQPESKKSVDTIVSSGKRNSQKTSDG 345
Query: 255 KGSPL-KVVKGNEVSLSLEKK----TPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKS 419
GS K++ +++ S +P K SA SPAK++TQA +S L W EKY+PK+
Sbjct: 346 TGSTATKILAAKQLAPSASPAKISGSPAKSSA---SPAKKKTQAK-ESLLPWTEKYRPKA 401
Query: 420 PDDILGDQPLLHE---WLSHWNDHFLHTGQQGKGKKQNDNGAKKS 545
DI+G++ L+ + WL W++HFL +GKGKKQ D+GAKK+
Sbjct: 402 IVDIIGNKSLVEQIQRWLESWDEHFLKASSKGKGKKQADSGAKKA 446
Score = 78.6 bits (192), Expect = 7e-12
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELG 141
SLEREEAEDL+KRHGGRVTGSVS KT YLL DED+ +KS KAKELG
Sbjct: 251 SLEREEAEDLIKRHGGRVTGSVSKKTTYLLCDEDVEGRKSSKAKELG 297
>ref|XP_010094821.1| Replication factor C subunit 1 [Morus notabilis]
gi|587867931|gb|EXB57307.1| Replication factor C subunit
1 [Morus notabilis]
Length = 1047
Score = 113 bits (282), Expect(2) = 5e-30
Identities = 61/91 (67%), Positives = 72/91 (79%)
Frame = +1
Query: 484 FYILGSREREKNRMTMELKKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKAD 663
F GS+++ K +KKAVL+SG+P IGK+TSAKLVS+ LGFQ IEVNASDSRGKAD
Sbjct: 464 FLDAGSKKKGKKANDPGVKKAVLLSGTPGIGKTTSAKLVSQMLGFQMIEVNASDSRGKAD 523
Query: 664 SKILKGIGGSMANSIKELVSNESFSANTKFS 756
+KI KGIGGS ANSIKELVSNE+ S N +S
Sbjct: 524 AKIEKGIGGSNANSIKELVSNEALSVNMDWS 554
Score = 46.6 bits (109), Expect(2) = 5e-30
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +3
Query: 813 SKQQKTVLIMDEVDGMSSGDRCGVADL 893
SK KTVLIMDEVDGMS+GDR G+ADL
Sbjct: 554 SKHPKTVLIMDEVDGMSAGDRGGIADL 580
Score = 102 bits (253), Expect = 6e-19
Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Frame = +3
Query: 114 EIRKSQRAR---TAFLTEDGLLDLIHKSKPTKTPPQDLKNTQDKGATSQPKGSPLKVVKG 284
E RKS++A+ T FL+EDGL D+I S K P Q+ K + D K S K+
Sbjct: 336 EGRKSEKAKELGTPFLSEDGLFDMIRASSRAK-PKQESKKSVDDADVPISKKSMQKIELK 394
Query: 285 NEVSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPL---LH 455
N + K K A S +++ Q S+LTW EKYKPK +DI+G+Q L LH
Sbjct: 395 NCTGSAAPKDVASKSLAARASLDRKKIQTAEHSALTWTEKYKPKVTNDIIGNQSLVKQLH 454
Query: 456 EWLSHWNDHFLHTGQQGKGKKQNDNGAKKS 545
WL++W++ FL G + KGKK ND G KK+
Sbjct: 455 YWLANWHEQFLDAGSKKKGKKANDPGVKKA 484
Score = 80.1 bits (196), Expect = 2e-12
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELG 141
SLEREEAEDL+K HGGRVTGSVS KTNYLL DEDI +KSEKAKELG
Sbjct: 301 SLEREEAEDLIKCHGGRVTGSVSKKTNYLLCDEDIEGRKSEKAKELG 347
>ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma cacao]
gi|508727448|gb|EOY19345.1| Replication factor C subunit
1 [Theobroma cacao]
Length = 1012
Score = 111 bits (277), Expect(2) = 7e-30
Identities = 59/83 (71%), Positives = 68/83 (81%)
Frame = +1
Query: 496 GSREREKNRMTMELKKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKADSKIL 675
GS+ + K + KKAVL+SG+P IGK+TSAKLVS+ LGFQ IEVNASDSRGKAD+KI
Sbjct: 377 GSKGKGKKQNDPGAKKAVLLSGTPGIGKTTSAKLVSQMLGFQTIEVNASDSRGKADAKIS 436
Query: 676 KGIGGSMANSIKELVSNESFSAN 744
KGIGGS ANSIKELVSNE+ S N
Sbjct: 437 KGIGGSNANSIKELVSNEALSVN 459
Score = 48.1 bits (113), Expect(2) = 7e-30
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 810 RSKQQKTVLIMDEVDGMSSGDRCGVADL 893
RSK KTVLIMDEVDGMS+GDR G+ADL
Sbjct: 462 RSKHVKTVLIMDEVDGMSAGDRGGIADL 489
Score = 116 bits (291), Expect = 2e-23
Identities = 71/152 (46%), Positives = 91/152 (59%), Gaps = 8/152 (5%)
Frame = +3
Query: 114 EIRKSQRARTA---FLTEDGLLDLIHKSKPTKT-PPQDLKNTQDKGATSQPKGSPLKV-V 278
E RKS +A+ FLTEDGL D+I S K ++ K + + A S PK SP K+ V
Sbjct: 246 EGRKSSKAKELGIPFLTEDGLFDMIRASNCGKAHSKEESKKSAESFAASLPKKSPQKMEV 305
Query: 279 KGNEVSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPL--- 449
K N S + K+ VS K+R Q SSLTW EKY+PK P+++ G+Q L
Sbjct: 306 KSNSSSAKISGKS----LTTSVSSTKQRGQPIQHSSLTWTEKYRPKVPNEMTGNQSLVNQ 361
Query: 450 LHEWLSHWNDHFLHTGQQGKGKKQNDNGAKKS 545
LH WL+HWN+ FL TG +GKGKKQND GAKK+
Sbjct: 362 LHNWLAHWNEQFLGTGSKGKGKKQNDPGAKKA 393
Score = 77.4 bits (189), Expect = 1e-11
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELGL 144
SLEREEAEDL+KRHGGR+T +VS KTNYLL DEDI +KS KAKELG+
Sbjct: 211 SLEREEAEDLIKRHGGRITTAVSKKTNYLLCDEDIEGRKSSKAKELGI 258
>ref|XP_009396469.1| PREDICTED: replication factor C subunit 1 isoform X3 [Musa
acuminata subsp. malaccensis]
gi|695018978|ref|XP_009396470.1| PREDICTED: replication
factor C subunit 1 isoform X3 [Musa acuminata subsp.
malaccensis] gi|695018980|ref|XP_009396471.1| PREDICTED:
replication factor C subunit 1 isoform X3 [Musa
acuminata subsp. malaccensis]
Length = 985
Score = 137 bits (346), Expect = 9e-30
Identities = 71/150 (47%), Positives = 99/150 (66%), Gaps = 8/150 (5%)
Frame = +3
Query: 120 RKSQRARTA---FLTEDGLLDLIHKSKPTKTPPQDLKNTQDKGATSQP--KGSPLKVVKG 284
RKS +A+ FLTEDGL D I KSKP K Q+ K + +P SP KV
Sbjct: 272 RKSSKAKELGIPFLTEDGLFDKIRKSKPAKAQMQEEKKKRSPEKMDKPIINKSPRKVEVK 331
Query: 285 NEVSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPL---LH 455
++ ++S+ +K K G+SP KR++Q+G SSLTW EKY+PK P+DI+G+Q + LH
Sbjct: 332 DDKAVSIGRKDAAKNVKSGISPDKRKSQSGDRSSLTWTEKYRPKLPNDIIGNQSIVKQLH 391
Query: 456 EWLSHWNDHFLHTGQQGKGKKQNDNGAKKS 545
+WL W++HFLH GQ+GKGKKQ+D+G+KK+
Sbjct: 392 DWLMTWDEHFLHAGQKGKGKKQSDSGSKKA 421
Score = 107 bits (267), Expect(2) = 2e-29
Identities = 57/88 (64%), Positives = 69/88 (78%)
Frame = +1
Query: 484 FYILGSREREKNRMTMELKKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKAD 663
F G + + K + KKAVL+SGSP IGKSTSAKLVS+ +GFQ IEVNASDSRGKAD
Sbjct: 401 FLHAGQKGKGKKQSDSGSKKAVLLSGSPGIGKSTSAKLVSQMIGFQAIEVNASDSRGKAD 460
Query: 664 SKILKGIGGSMANSIKELVSNESFSANT 747
+KI KGIGGS +NSIKELVSNE ++++
Sbjct: 461 AKIGKGIGGSTSNSIKELVSNEIVNSSS 488
Score = 50.4 bits (119), Expect(2) = 2e-29
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 2/35 (5%)
Frame = +3
Query: 795 VN*SS--RSKQQKTVLIMDEVDGMSSGDRCGVADL 893
VN SS RSK+QK+VLIMDEVDGMS+GDR GVADL
Sbjct: 484 VNSSSDCRSKRQKSVLIMDEVDGMSAGDRGGVADL 518
Score = 79.3 bits (194), Expect = 4e-12
Identities = 37/48 (77%), Positives = 44/48 (91%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELGL 144
SLEREEAEDL+KRHGGRVT +VS KT++LLADED+G +KS KAKELG+
Sbjct: 235 SLEREEAEDLIKRHGGRVTSAVSKKTSFLLADEDVGGRKSSKAKELGI 282
>ref|XP_009396468.1| PREDICTED: replication factor C subunit 1 isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 986
Score = 137 bits (346), Expect = 9e-30
Identities = 71/150 (47%), Positives = 99/150 (66%), Gaps = 8/150 (5%)
Frame = +3
Query: 120 RKSQRARTA---FLTEDGLLDLIHKSKPTKTPPQDLKNTQDKGATSQP--KGSPLKVVKG 284
RKS +A+ FLTEDGL D I KSKP K Q+ K + +P SP KV
Sbjct: 274 RKSSKAKELGIPFLTEDGLFDKIRKSKPAKAQMQEEKKKRSPEKMDKPIINKSPRKVEVK 333
Query: 285 NEVSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPL---LH 455
++ ++S+ +K K G+SP KR++Q+G SSLTW EKY+PK P+DI+G+Q + LH
Sbjct: 334 DDKAVSIGRKDAAKNVKSGISPDKRKSQSGDRSSLTWTEKYRPKLPNDIIGNQSIVKQLH 393
Query: 456 EWLSHWNDHFLHTGQQGKGKKQNDNGAKKS 545
+WL W++HFLH GQ+GKGKKQ+D+G+KK+
Sbjct: 394 DWLMTWDEHFLHAGQKGKGKKQSDSGSKKA 423
Score = 108 bits (271), Expect(2) = 3e-29
Identities = 58/91 (63%), Positives = 71/91 (78%)
Frame = +1
Query: 484 FYILGSREREKNRMTMELKKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKAD 663
F G + + K + KKAVL+SGSP IGKSTSAKLVS+ +GFQ IEVNASDSRGKAD
Sbjct: 403 FLHAGQKGKGKKQSDSGSKKAVLLSGSPGIGKSTSAKLVSQMIGFQAIEVNASDSRGKAD 462
Query: 664 SKILKGIGGSMANSIKELVSNESFSANTKFS 756
+KI KGIGGS +NSIKELVSNE ++++ +S
Sbjct: 463 AKIGKGIGGSTSNSIKELVSNEIVNSSSDWS 493
Score = 48.5 bits (114), Expect(2) = 3e-29
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 804 SSRSKQQKTVLIMDEVDGMSSGDRCGVADL 893
S SK+QK+VLIMDEVDGMS+GDR GVADL
Sbjct: 490 SDWSKRQKSVLIMDEVDGMSAGDRGGVADL 519
Score = 79.3 bits (194), Expect = 4e-12
Identities = 37/48 (77%), Positives = 44/48 (91%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELGL 144
SLEREEAEDL+KRHGGRVT +VS KT++LLADED+G +KS KAKELG+
Sbjct: 237 SLEREEAEDLIKRHGGRVTSAVSKKTSFLLADEDVGGRKSSKAKELGI 284
>ref|XP_009396464.1| PREDICTED: replication factor C subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
gi|695018968|ref|XP_009396465.1| PREDICTED: replication
factor C subunit 1 isoform X1 [Musa acuminata subsp.
malaccensis] gi|695018970|ref|XP_009396466.1| PREDICTED:
replication factor C subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
gi|695018972|ref|XP_009396467.1| PREDICTED: replication
factor C subunit 1 isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 987
Score = 137 bits (346), Expect = 9e-30
Identities = 71/150 (47%), Positives = 99/150 (66%), Gaps = 8/150 (5%)
Frame = +3
Query: 120 RKSQRARTA---FLTEDGLLDLIHKSKPTKTPPQDLKNTQDKGATSQP--KGSPLKVVKG 284
RKS +A+ FLTEDGL D I KSKP K Q+ K + +P SP KV
Sbjct: 274 RKSSKAKELGIPFLTEDGLFDKIRKSKPAKAQMQEEKKKRSPEKMDKPIINKSPRKVEVK 333
Query: 285 NEVSLSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPL---LH 455
++ ++S+ +K K G+SP KR++Q+G SSLTW EKY+PK P+DI+G+Q + LH
Sbjct: 334 DDKAVSIGRKDAAKNVKSGISPDKRKSQSGDRSSLTWTEKYRPKLPNDIIGNQSIVKQLH 393
Query: 456 EWLSHWNDHFLHTGQQGKGKKQNDNGAKKS 545
+WL W++HFLH GQ+GKGKKQ+D+G+KK+
Sbjct: 394 DWLMTWDEHFLHAGQKGKGKKQSDSGSKKA 423
Score = 107 bits (267), Expect(2) = 2e-29
Identities = 57/88 (64%), Positives = 69/88 (78%)
Frame = +1
Query: 484 FYILGSREREKNRMTMELKKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKAD 663
F G + + K + KKAVL+SGSP IGKSTSAKLVS+ +GFQ IEVNASDSRGKAD
Sbjct: 403 FLHAGQKGKGKKQSDSGSKKAVLLSGSPGIGKSTSAKLVSQMIGFQAIEVNASDSRGKAD 462
Query: 664 SKILKGIGGSMANSIKELVSNESFSANT 747
+KI KGIGGS +NSIKELVSNE ++++
Sbjct: 463 AKIGKGIGGSTSNSIKELVSNEIVNSSS 490
Score = 50.4 bits (119), Expect(2) = 2e-29
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 2/35 (5%)
Frame = +3
Query: 795 VN*SS--RSKQQKTVLIMDEVDGMSSGDRCGVADL 893
VN SS RSK+QK+VLIMDEVDGMS+GDR GVADL
Sbjct: 486 VNSSSDCRSKRQKSVLIMDEVDGMSAGDRGGVADL 520
Score = 79.3 bits (194), Expect = 4e-12
Identities = 37/48 (77%), Positives = 44/48 (91%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELGL 144
SLEREEAEDL+KRHGGRVT +VS KT++LLADED+G +KS KAKELG+
Sbjct: 237 SLEREEAEDLIKRHGGRVTSAVSKKTSFLLADEDVGGRKSSKAKELGI 284
>ref|XP_009626889.1| PREDICTED: replication factor C subunit 1 isoform X1 [Nicotiana
tomentosiformis]
Length = 1029
Score = 109 bits (273), Expect(2) = 1e-29
Identities = 60/87 (68%), Positives = 67/87 (77%)
Frame = +1
Query: 484 FYILGSREREKNRMTMELKKAVLISGSPDIGKSTSAKLVSEKLGFQGIEVNASDSRGKAD 663
F S+ + K + KKAVL+SG P IGK+TSAK+VS+ LGFQ IEVNASDSRGKAD
Sbjct: 415 FLNAASKGKGKKQNDSGAKKAVLLSGMPGIGKTTSAKVVSQLLGFQTIEVNASDSRGKAD 474
Query: 664 SKILKGIGGSMANSIKELVSNESFSAN 744
SKI KGIGGS ANSIKELVSNES AN
Sbjct: 475 SKIEKGIGGSTANSIKELVSNESLGAN 501
Score = 48.9 bits (115), Expect(2) = 1e-29
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +3
Query: 810 RSKQQKTVLIMDEVDGMSSGDRCGVADL 893
RS QKTVLIMDEVDGMS+GDR GVADL
Sbjct: 504 RSHHQKTVLIMDEVDGMSAGDRGGVADL 531
Score = 101 bits (251), Expect = 1e-18
Identities = 63/154 (40%), Positives = 93/154 (60%), Gaps = 10/154 (6%)
Frame = +3
Query: 114 EIRKSQRAR---TAFLTEDGLLDLIHKSKPTK--TPPQDLKNTQDKGATSQPKGSPLKVV 278
E RKS +A+ TAFLTEDGL ++I SK +K T P+ K+ + ++
Sbjct: 289 EGRKSSKAKELGTAFLTEDGLFNMIRSSKKSKPATQPESKKSVDTVVSPAKRNSQNTSDG 348
Query: 279 KGNEVS--LSLEKKTPPKGSAQGVSPAKRRTQAGGDSSLTWPEKYKPKSPDDILGDQPLL 452
G+ + L+ ++ TP SPAKR+ QA +SSL W EKY+PK+ DI+G++ L+
Sbjct: 349 TGSTATKILAAKELTP------SASPAKRKGQAK-ESSLPWTEKYRPKAIVDIIGNKSLV 401
Query: 453 HE---WLSHWNDHFLHTGQQGKGKKQNDNGAKKS 545
+ WL W++HFL+ +GKGKKQND+GAKK+
Sbjct: 402 EQIQRWLESWDEHFLNAASKGKGKKQNDSGAKKA 435
Score = 81.3 bits (199), Expect = 1e-12
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 1 SLEREEAEDLVKRHGGRVTGSVSNKTNYLLADEDIGEQKSEKAKELG 141
SLEREEAEDL+KRHGGRVTGSVS KTNYLL DEDI +KS KAKELG
Sbjct: 254 SLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIEGRKSSKAKELG 300