BLASTX nr result

ID: Papaver29_contig00016106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00016106
         (548 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010270241.1| PREDICTED: F-box protein CPR30-like [Nelumbo...    58   3e-06

>ref|XP_010270241.1| PREDICTED: F-box protein CPR30-like [Nelumbo nucifera]
          Length = 409

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
 Frame = -2

Query: 478 GKLCLLCTVRTKDPDICTHQKDHIDVWTMMD----NKWSKQLKIT--ANMTDMCYISPIQ 317
           G+LC+LC           + K  +D+W M +      WS+Q  I   + +    Y+ P+ 
Sbjct: 271 GRLCILCN----------YYKFRVDIWVMNEYGVKESWSRQFSIAQPSVIRSFEYLRPLC 320

Query: 316 TLQNGEILFTGETKGEPGVGLISYDPNRDRVRALKIHGFPEWSDEHTYIETLVVLN 149
             +NGE+L   +        L+ YD   +R R L+IHG P+W +   ++ +L+ L+
Sbjct: 321 FSKNGELLLEQDNNR-----LVLYDSKSERARVLRIHGIPDWFETEIFVGSLIPLS 371


Top