BLASTX nr result

ID: Papaver29_contig00015312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00015312
         (501 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010658921.1| PREDICTED: mediator of RNA polymerase II tra...    59   1e-06
ref|XP_007150783.1| hypothetical protein PHAVU_005G180200g [Phas...    59   1e-06
ref|XP_010245153.1| PREDICTED: mediator of RNA polymerase II tra...    57   4e-06
ref|XP_010245151.1| PREDICTED: mediator of RNA polymerase II tra...    57   4e-06
ref|XP_009348726.1| PREDICTED: mediator of RNA polymerase II tra...    57   7e-06
ref|XP_009348724.1| PREDICTED: mediator of RNA polymerase II tra...    57   7e-06

>ref|XP_010658921.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
           [Vitis vinifera]
          Length = 1333

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 32/46 (69%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = -3

Query: 214 PNSIQRDMQQRIQTSGGSMLNHQNLLD-QKQAFHSQRPPPEASSTS 80
           PNS+QRDMQQR+QTS G++L  QN++D QKQ F SQR  PEASSTS
Sbjct: 506 PNSLQRDMQQRLQTS-GALLQTQNVIDQQKQLFQSQRALPEASSTS 550


>ref|XP_007150783.1| hypothetical protein PHAVU_005G180200g [Phaseolus vulgaris]
           gi|561024047|gb|ESW22777.1| hypothetical protein
           PHAVU_005G180200g [Phaseolus vulgaris]
          Length = 1318

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 52/144 (36%), Positives = 63/144 (43%), Gaps = 4/144 (2%)
 Frame = -3

Query: 499 IANMQQHLLGNNIP---HQQQLGQQSNMSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 329
           ++NM Q L GNN+     QQ LG QS  SG+                             
Sbjct: 405 LSNMHQQL-GNNVSGLQQQQVLGPQSGNSGMQTSQHSAHVLQQSQVQIQPQSQQNASN-- 461

Query: 328 MLQIQGQHTXXXXXXXXXXXQHPSXXXXXXXXXXXXXQPNSIQRDMQQRIQTSGGSMLNH 149
           +L  QGQ +           Q  S             QPNS+QRDMQQR+Q S G +L  
Sbjct: 462 LLPSQGQQSQSLASQQQLMPQIQSQPAQLQQQLGLQQQPNSLQRDMQQRLQAS-GPLLQQ 520

Query: 148 QNLLD-QKQAFHSQRPPPEASSTS 80
            N+LD QKQ + SQRP PE SSTS
Sbjct: 521 SNVLDQQKQLYQSQRPLPETSSTS 544


>ref|XP_010245153.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
           isoform X2 [Nelumbo nucifera]
          Length = 1386

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = -3

Query: 211 NSIQRDMQQRIQTSGGSMLNHQNLLD-QKQAFHSQRPPPEASSTSGNXXXXXXXAGNSTA 35
           N +QRDMQQR+QTS G++L  QN ++ QKQ F SQR  PEASSTS         +   T 
Sbjct: 528 NPLQRDMQQRLQTS-GALLQPQNAIEQQKQLFQSQRMLPEASSTS-------IESTAQTG 579

Query: 34  IGNAVDVQEEI 2
             NA+D+QEE+
Sbjct: 580 HANAIDLQEEV 590


>ref|XP_010245151.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
           isoform X1 [Nelumbo nucifera]
           gi|720090613|ref|XP_010245152.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 15a isoform X1
           [Nelumbo nucifera]
          Length = 1422

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = -3

Query: 211 NSIQRDMQQRIQTSGGSMLNHQNLLD-QKQAFHSQRPPPEASSTSGNXXXXXXXAGNSTA 35
           N +QRDMQQR+QTS G++L  QN ++ QKQ F SQR  PEASSTS         +   T 
Sbjct: 564 NPLQRDMQQRLQTS-GALLQPQNAIEQQKQLFQSQRMLPEASSTS-------IESTAQTG 615

Query: 34  IGNAVDVQEEI 2
             NA+D+QEE+
Sbjct: 616 HANAIDLQEEV 626


>ref|XP_009348726.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X2 [Pyrus x bretschneideri]
          Length = 1124

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
 Frame = -3

Query: 211 NSIQRDMQQRIQTSG---GSMLNHQNLLDQ-KQAFHSQRPPPEASSTSGNXXXXXXXAGN 44
           N +QRDMQQR+Q SG   G+ML  QN++DQ KQ + SQRP PE SSTS         +  
Sbjct: 289 NPLQRDMQQRLQASGQISGTMLQAQNVMDQQKQLYQSQRPLPETSSTS-------LDSSA 341

Query: 43  STAIGNAVDVQEEI 2
            T   N  D QEE+
Sbjct: 342 QTGHANGGDWQEEV 355


>ref|XP_009348724.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X1 [Pyrus x bretschneideri]
          Length = 1202

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
 Frame = -3

Query: 211 NSIQRDMQQRIQTSG---GSMLNHQNLLDQ-KQAFHSQRPPPEASSTSGNXXXXXXXAGN 44
           N +QRDMQQR+Q SG   G+ML  QN++DQ KQ + SQRP PE SSTS         +  
Sbjct: 367 NPLQRDMQQRLQASGQISGTMLQAQNVMDQQKQLYQSQRPLPETSSTS-------LDSSA 419

Query: 43  STAIGNAVDVQEEI 2
            T   N  D QEE+
Sbjct: 420 QTGHANGGDWQEEV 433


Top