BLASTX nr result
ID: Papaver29_contig00015289
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00015289
(827 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010246803.1| PREDICTED: pentatricopeptide repeat-containi... 461 e-127
ref|XP_008226294.1| PREDICTED: pentatricopeptide repeat-containi... 457 e-126
ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containi... 452 e-124
ref|XP_008444287.1| PREDICTED: pentatricopeptide repeat-containi... 451 e-124
ref|XP_009371377.1| PREDICTED: pentatricopeptide repeat-containi... 451 e-124
ref|XP_010062706.1| PREDICTED: pentatricopeptide repeat-containi... 449 e-124
ref|XP_011653982.1| PREDICTED: pentatricopeptide repeat-containi... 449 e-123
ref|XP_008383030.1| PREDICTED: pentatricopeptide repeat-containi... 448 e-123
ref|XP_012441071.1| PREDICTED: pentatricopeptide repeat-containi... 446 e-123
ref|XP_007022279.1| Pentatricopeptide repeat (PPR) superfamily p... 446 e-123
ref|XP_009361764.1| PREDICTED: pentatricopeptide repeat-containi... 445 e-122
ref|XP_011460866.1| PREDICTED: pentatricopeptide repeat-containi... 443 e-122
ref|XP_008364411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 440 e-121
ref|XP_009397366.1| PREDICTED: pentatricopeptide repeat-containi... 436 e-119
emb|CDP13612.1| unnamed protein product [Coffea canephora] 434 e-119
ref|XP_006441032.1| hypothetical protein CICLE_v10019503mg [Citr... 434 e-119
ref|XP_011030727.1| PREDICTED: pentatricopeptide repeat-containi... 433 e-119
ref|XP_012087429.1| PREDICTED: pentatricopeptide repeat-containi... 433 e-119
ref|XP_002317023.2| hypothetical protein POPTR_0011s14750g [Popu... 432 e-118
ref|XP_006478018.1| PREDICTED: pentatricopeptide repeat-containi... 431 e-118
>ref|XP_010246803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Nelumbo nucifera]
Length = 562
Score = 461 bits (1186), Expect = e-127
Identities = 218/274 (79%), Positives = 251/274 (91%)
Frame = +1
Query: 4 MMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHG 183
++V SG PD SY FL+NQLCKRGNVGYAMQLV+K+EE+G PPNT+TYNSLVRGLC+HG
Sbjct: 122 ILVSSGNTPDVGSYIFLVNQLCKRGNVGYAMQLVEKMEEYGFPPNTITYNSLVRGLCMHG 181
Query: 184 NLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYN 363
NLQ S Q+LDRLMQKGLVPNVFTYSFLLEAAYK+RGVDEA+RLLDEIIAKGG+PNLVSYN
Sbjct: 182 NLQKSFQLLDRLMQKGLVPNVFTYSFLLEAAYKERGVDEAMRLLDEIIAKGGRPNLVSYN 241
Query: 364 VLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGE 543
VLLTG CKE R EA++FFR+LP KGF+PNVVSYNI+L+S+CYEGRW+EAN LL+EM GE
Sbjct: 242 VLLTGLCKEDRIGEAIKFFRDLPMKGFNPNVVSYNILLKSLCYEGRWEEANELLAEMDGE 301
Query: 544 TRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFV 723
R+PS+ITYNILI SLALHGRTDDA EVL EM+R+R+KPNA SYNP+IAQ+CKEGKVD V
Sbjct: 302 DRTPSLITYNILIGSLALHGRTDDAYEVLVEMLRNRYKPNAASYNPLIAQYCKEGKVDLV 361
Query: 724 VKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VKCLDQM+YRH +PN+GTYNALAVLC+EGKVQE+
Sbjct: 362 VKCLDQMMYRHCSPNEGTYNALAVLCKEGKVQES 395
Score = 124 bits (310), Expect = 1e-25
Identities = 79/295 (26%), Positives = 131/295 (44%), Gaps = 34/295 (11%)
Frame = +1
Query: 7 MVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGN 186
++ G P+ SY L+ LCK +G A++ L G PN V+YN L++ LC G
Sbjct: 228 IIAKGGRPNLVSYNVLLTGLCKEDRIGEAIKFFRDLPMKGFNPNVVSYNILLKSLCYEGR 287
Query: 187 LQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNV 366
+ + ++L + + P++ TY+ L+ + D+A +L E++ KPN SYN
Sbjct: 288 WEEANELLAEMDGEDRTPSLITYNILIGSLALHGRTDDAYEVLVEMLRNRYKPNAASYNP 347
Query: 367 LLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNI------------------------- 471
L+ +CKEG+ D V+ + + PN +YN
Sbjct: 348 LIAQYCKEGKVDLVVKCLDQMMYRHCSPNEGTYNALAVLCKEGKVQESFSILQSLGNKQN 407
Query: 472 ---------VLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALE 624
V+ S+C +G A LL EM +P T + LI L L G +A+E
Sbjct: 408 SSMHDFYRNVVSSLCRKGNTLAAFHLLYEMTKSGFTPDSYTNSSLIRGLCLEGMLAEAME 467
Query: 625 VLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL 789
+ M + +P+ +YN +I CK + D ++ + MI + PN+ +Y L
Sbjct: 468 IFTVMEENDCRPDIDNYNALILGLCKAQRTDLSLEVFEMMIEKGYMPNETSYTIL 522
Score = 118 bits (296), Expect = 5e-24
Identities = 69/246 (28%), Positives = 124/246 (50%), Gaps = 1/246 (0%)
Frame = +1
Query: 91 AMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLE 270
A ++ + E G P+ L+ LC ++ +++V+ L+ G P+V +Y FL+
Sbjct: 81 AFLYLEYMVEKGHRPDLAQSTQLLYDLCKSNKIRKAIRVMGILVSSGNTPDVGSYIFLVN 140
Query: 271 AAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDP 450
K V A++L++++ G PN ++YN L+ G C G ++ + L KG P
Sbjct: 141 QLCKRGNVGYAMQLVEKMEEYGFPPNTITYNSLVRGLCMHGNLQKSFQLLDRLMQKGLVP 200
Query: 451 NVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVL 630
NV +Y+ +L + E DEA LL E++ + P++++YN+L++ L R +A++
Sbjct: 201 NVFTYSFLLEAAYKERGVDEAMRLLDEIIAKGGRPNLVSYNVLLTGLCKEDRIGEAIKFF 260
Query: 631 EEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL-AVLCEE 807
++ F PN SYN ++ C EG+ + + L +M P+ TYN L L
Sbjct: 261 RDLPMKGFNPNVVSYNILLKSLCYEGRWEEANELLAEMDGEDRTPSLITYNILIGSLALH 320
Query: 808 GKVQEA 825
G+ +A
Sbjct: 321 GRTDDA 326
Score = 115 bits (287), Expect = 5e-23
Identities = 60/214 (28%), Positives = 113/214 (52%), Gaps = 1/214 (0%)
Frame = +1
Query: 187 LQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNV 366
L + L+ +++KG P++ + LL K + +A+R++ +++ G P++ SY
Sbjct: 78 LNDAFLYLEYMVEKGHRPDLAQSTQLLYDLCKSNKIRKAIRVMGILVSSGNTPDVGSYIF 137
Query: 367 LLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGET 546
L+ CK G A++ + GF PN ++YN ++R +C G ++ LL ++ +
Sbjct: 138 LVNQLCKRGNVGYAMQLVEKMEEYGFPPNTITYNSLVRGLCMHGNLQKSFQLLDRLMQKG 197
Query: 547 RSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVV 726
P+V TY+ L+ + D+A+ +L+E++ +PN SYN ++ CKE ++ +
Sbjct: 198 LVPNVFTYSFLLEAAYKERGVDEAMRLLDEIIAKGGRPNLVSYNVLLTGLCKEDRIGEAI 257
Query: 727 KCLDQMIYRHVNPNDGTYN-ALAVLCEEGKVQEA 825
K + + NPN +YN L LC EG+ +EA
Sbjct: 258 KFFRDLPMKGFNPNVVSYNILLKSLCYEGRWEEA 291
Score = 94.0 bits (232), Expect = 1e-16
Identities = 60/219 (27%), Positives = 106/219 (48%)
Frame = +1
Query: 28 PDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQV 207
P++ASY LI Q CK G V ++ +D++ C PN TYN+L LC G +Q S +
Sbjct: 340 PNAASYNPLIAQYCKEGKVDLVVKCLDQMMYRHCSPNEGTYNALAV-LCKEGKVQESFSI 398
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
L L K Y ++ + + A LL E+ G P+ + + L+ G C
Sbjct: 399 LQSLGNKQNSSMHDFYRNVVSSLCRKGNTLAAFHLLYEMTKSGFTPDSYTNSSLIRGLCL 458
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
EG EA+E F + P++ +YN ++ +C R D + + M+ + P+ +
Sbjct: 459 EGMLAEAMEIFTVMEENDCRPDIDNYNALILGLCKAQRTDLSLEVFEMMIEKGYMPNETS 518
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPI 684
Y IL+ +A ++ +E+ E++R ++ + S+N +
Sbjct: 519 YTILVEGIA----HEEEIELAAEVLRELYQKHVLSWNTV 553
Score = 78.6 bits (192), Expect = 5e-12
Identities = 42/146 (28%), Positives = 79/146 (54%)
Frame = +1
Query: 43 YTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLM 222
Y +++ LC++GN A L+ ++ + G P++ T +SL+RGLC+ G L ++++ +
Sbjct: 414 YRNVVSSLCRKGNTLAAFHLLYEMTKSGFTPDSYTNSSLIRGLCLEGMLAEAMEIFTVME 473
Query: 223 QKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTD 402
+ P++ Y+ L+ K + D ++ + + +I KG PN SY +L+ G E +
Sbjct: 474 ENDCRPDIDNYNALILGLCKAQRTDLSLEVFEMMIEKGYMPNETSYTILVEGIAHEEEIE 533
Query: 403 EAVEFFRNLPSKGFDPNVVSYNIVLR 480
A E R L + +V+S+N V R
Sbjct: 534 LAAEVLREL----YQKHVLSWNTVER 555
Score = 70.9 bits (172), Expect = 1e-09
Identities = 39/121 (32%), Positives = 67/121 (55%)
Frame = +1
Query: 7 MVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGN 186
M SG PDS + + LI LC G + AM++ +EE C P+ YN+L+ GLC
Sbjct: 437 MTKSGFTPDSYTNSSLIRGLCLEGMLAEAMEIFTVMEENDCRPDIDNYNALILGLCKAQR 496
Query: 187 LQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNV 366
SL+V + +++KG +PN +Y+ L+E + ++ A +L E+ K +++S+N
Sbjct: 497 TDLSLEVFEMMIEKGYMPNETSYTILVEGIAHEEEIELAAEVLRELYQK----HVLSWNT 552
Query: 367 L 369
+
Sbjct: 553 V 553
Score = 60.8 bits (146), Expect = 1e-06
Identities = 32/135 (23%), Positives = 67/135 (49%)
Frame = +1
Query: 385 KEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVI 564
+E + ++A + + KG P++ +L +C + +A ++ +V +P V
Sbjct: 74 RELKLNDAFLYLEYMVEKGHRPDLAQSTQLLYDLCKSNKIRKAIRVMGILVSSGNTPDVG 133
Query: 565 TYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQM 744
+Y L++ L G A++++E+M F PN +YN ++ C G + + LD++
Sbjct: 134 SYIFLVNQLCKRGNVGYAMQLVEKMEEYGFPPNTITYNSLVRGLCMHGNLQKSFQLLDRL 193
Query: 745 IYRHVNPNDGTYNAL 789
+ + + PN TY+ L
Sbjct: 194 MQKGLVPNVFTYSFL 208
>ref|XP_008226294.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Prunus mume]
Length = 567
Score = 457 bits (1176), Expect = e-126
Identities = 218/275 (79%), Positives = 249/275 (90%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMMV +G IPD+ASYTFL+N LCKRGN+GYAMQLV+K+EE+G P NT+TYNSLVRGLC+
Sbjct: 121 EMMVSAGIIPDAASYTFLVNYLCKRGNIGYAMQLVEKMEEYGYPTNTITYNSLVRGLCVR 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ+LDRL+QKGLVPNV+TYSFLLEAAYK+RGV+EA++LL EIIAKGGKPNLVSY
Sbjct: 181 GNLNQSLQLLDRLIQKGLVPNVYTYSFLLEAAYKERGVNEAMKLLQEIIAKGGKPNLVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRTDEA+ FFRNLPS GFDPNVVSYNIVLRS+CYEGRW+EAN LLSEM G
Sbjct: 241 NVLLTGLCKEGRTDEALRFFRNLPSMGFDPNVVSYNIVLRSLCYEGRWEEANELLSEMEG 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
E RSPS++TYNILI SLALHGRT+ ALEVL+EM+R +FKP+A SYNPIIA CKE KVD
Sbjct: 301 EDRSPSIVTYNILIGSLALHGRTEHALEVLDEMVRGQFKPSAASYNPIIAHLCKERKVDS 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
V+KCLDQMI+R NPN+GT+NA+AVLCEEG VQEA
Sbjct: 361 VIKCLDQMIHRRCNPNEGTFNAIAVLCEEGMVQEA 395
Score = 143 bits (360), Expect = 2e-31
Identities = 80/270 (29%), Positives = 140/270 (51%), Gaps = 1/270 (0%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY ++ LC G A +L+ ++E P+ VTYN L+ L +HG +H+
Sbjct: 267 GFDPNVVSYNIVLRSLCYEGRWEEANELLSEMEGEDRSPSIVTYNILIGSLALHGRTEHA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
L+VLD +++ P+ +Y+ ++ K+R VD ++ LD++I + PN ++N +
Sbjct: 327 LEVLDEMVRGQFKPSAASYNPIIAHLCKERKVDSVIKCLDQMIHRRCNPNEGTFNAIAV- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
C+EG EA +L +K Y V+ S+C +G A +L EM +P
Sbjct: 386 LCEEGMVQEAFSIIHSLANKQKCSTNEFYKNVITSLCRKGNTFPAFQILYEMTKRGFTPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L L G D+A+E+ + M + +P+ ++N ++ FCK + D ++ +
Sbjct: 446 SYTYSSLIRGLCLEGMLDEAMEIFKVMEENNIRPDTDNFNALVLGFCKSRRTDLSLQVFE 505
Query: 739 QMIYRHVNPNDGTYNALAV-LCEEGKVQEA 825
MI + PN+ TY L + EG+++ A
Sbjct: 506 MMIKKGRMPNEMTYTILVEGIAHEGELELA 535
Score = 125 bits (314), Expect = 4e-26
Identities = 66/235 (28%), Positives = 125/235 (53%), Gaps = 1/235 (0%)
Frame = +1
Query: 124 GCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEA 303
G P+ L+ LC ++ +++V++ ++ G++P+ +Y+FL+ K + A
Sbjct: 92 GQKPDVAQATQLLYDLCKANKMRKAVRVIEMMVSAGIIPDAASYTFLVNYLCKRGNIGYA 151
Query: 304 VRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRS 483
++L++++ G N ++YN L+ G C G +++++ L KG PNV +Y+ +L +
Sbjct: 152 MQLVEKMEEYGYPTNTITYNSLVRGLCVRGNLNQSLQLLDRLIQKGLVPNVYTYSFLLEA 211
Query: 484 MCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPN 663
E +EA LL E++ + P++++YN+L++ L GRTD+AL + F PN
Sbjct: 212 AYKERGVNEAMKLLQEIIAKGGKPNLVSYNVLLTGLCKEGRTDEALRFFRNLPSMGFDPN 271
Query: 664 ATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL-AVLCEEGKVQEA 825
SYN ++ C EG+ + + L +M +P+ TYN L L G+ + A
Sbjct: 272 VVSYNIVLRSLCYEGRWEEANELLSEMEGEDRSPSIVTYNILIGSLALHGRTEHA 326
Score = 109 bits (272), Expect = 3e-21
Identities = 59/207 (28%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Frame = +1
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
L+ ++ KG P+V + LL K + +AVR+++ +++ G P+ SY L+ CK
Sbjct: 85 LESMVGKGQKPDVAQATQLLYDLCKANKMRKAVRVIEMMVSAGIIPDAASYTFLVNYLCK 144
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
G A++ + G+ N ++YN ++R +C G +++ LL ++ + P+V T
Sbjct: 145 RGNIGYAMQLVEKMEEYGYPTNTITYNSLVRGLCVRGNLNQSLQLLDRLIQKGLVPNVYT 204
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMI 747
Y+ L+ + ++A+++L+E++ KPN SYN ++ CKEG+ D ++ +
Sbjct: 205 YSFLLEAAYKERGVNEAMKLLQEIIAKGGKPNLVSYNVLLTGLCKEGRTDEALRFFRNLP 264
Query: 748 YRHVNPNDGTYN-ALAVLCEEGKVQEA 825
+PN +YN L LC EG+ +EA
Sbjct: 265 SMGFDPNVVSYNIVLRSLCYEGRWEEA 291
Score = 80.5 bits (197), Expect = 1e-12
Identities = 40/140 (28%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Frame = +1
Query: 43 YTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLM 222
Y +I LC++GN A Q++ ++ + G P++ TY+SL+RGLC+ G L ++++ +
Sbjct: 414 YKNVITSLCRKGNTFPAFQILYEMTKRGFTPDSYTYSSLIRGLCLEGMLDEAMEIFKVME 473
Query: 223 QKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTD 402
+ + P+ ++ L+ K R D ++++ + +I KG PN ++Y +L+ G EG +
Sbjct: 474 ENNIRPDTDNFNALVLGFCKSRRTDLSLQVFEMMIKKGRMPNEMTYTILVEGIAHEGELE 533
Query: 403 EAVEFFRNLPSKG-FDPNVV 459
A + + L + PN V
Sbjct: 534 LAAKVLKELHLRHVMSPNTV 553
Score = 69.3 bits (168), Expect = 3e-09
Identities = 37/106 (34%), Positives = 59/106 (55%)
Frame = +1
Query: 7 MVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGN 186
M G PDS +Y+ LI LC G + AM++ +EE P+T +N+LV G C
Sbjct: 437 MTKRGFTPDSYTYSSLIRGLCLEGMLDEAMEIFKVMEENNIRPDTDNFNALVLGFCKSRR 496
Query: 187 LQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEI 324
SLQV + +++KG +PN TY+ L+E + ++ A ++L E+
Sbjct: 497 TDLSLQVFEMMIKKGRMPNEMTYTILVEGIAHEGELELAAKVLKEL 542
Score = 57.8 bits (138), Expect = 9e-06
Identities = 33/135 (24%), Positives = 65/135 (48%)
Frame = +1
Query: 385 KEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVI 564
+E R +A ++ KG P+V +L +C + +A ++ MV P
Sbjct: 74 REVRLIDAFLHLESMVGKGQKPDVAQATQLLYDLCKANKMRKAVRVIEMMVSAGIIPDAA 133
Query: 565 TYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQM 744
+Y L++ L G A++++E+M + N +YN ++ C G ++ ++ LD++
Sbjct: 134 SYTFLVNYLCKRGNIGYAMQLVEKMEEYGYPTNTITYNSLVRGLCVRGNLNQSLQLLDRL 193
Query: 745 IYRHVNPNDGTYNAL 789
I + + PN TY+ L
Sbjct: 194 IQKGLVPNVYTYSFL 208
>ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Vitis vinifera]
gi|147852271|emb|CAN82234.1| hypothetical protein
VITISV_038804 [Vitis vinifera]
Length = 567
Score = 452 bits (1162), Expect = e-124
Identities = 214/275 (77%), Positives = 247/275 (89%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
E+M+ SGT PD AS TFL+N LCKRGNVGYAMQLV+K+EE+G P NTVTYNSLVRGLC+H
Sbjct: 121 ELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ+LD+ M+KGLVPNVFTYSFLLEAAYK+RG DEA+RLLDEI+AKGGKPNLVSY
Sbjct: 181 GNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRT+EA++FFR+LPSKGF PNVVSYNI+LRS+CYEGRW++A LL+EM G
Sbjct: 241 NVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDG 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
RSPS++T+NILI SLALHG+TD ALEVL++M R+RFK A SYNPIIA+ CKEGKVD
Sbjct: 301 GERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDL 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VVKCLDQM+YR NPN+GTYNA+AVLCEEGKVQEA
Sbjct: 361 VVKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEA 395
Score = 121 bits (303), Expect = 7e-25
Identities = 73/257 (28%), Positives = 124/257 (48%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY L+ LC G A +L+ +++ P+ VT+N L+ L +HG +
Sbjct: 267 GFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
L+VLD + + +Y+ ++ K+ VD V+ LD+++ + PN +YN +
Sbjct: 327 LEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNAIAV- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
C+EG+ EA ++L +K Y V+ S+C +G A LL EM P
Sbjct: 386 LCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L G D+A+E+ M + +P+ ++N +I CK K D + +
Sbjct: 446 SYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVFE 505
Query: 739 QMIYRHVNPNDGTYNAL 789
M+ + PN+ TY +
Sbjct: 506 MMVKKGYMPNETTYTII 522
Score = 99.8 bits (247), Expect = 2e-18
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
Frame = +1
Query: 187 LQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNV 366
L + L+ ++ KG P+ + L+ K + +A ++++ +I G P+ S
Sbjct: 78 LNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTF 137
Query: 367 LLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGET 546
L+ CK G A++ + G+ N V+YN ++R +C G ++ +L + + +
Sbjct: 138 LVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKG 197
Query: 547 RSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVV 726
P+V TY+ L+ + D+A+ +L+E++ KPN SYN ++ CKEG+ + +
Sbjct: 198 LVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAM 257
Query: 727 KCLDQMIYRHVNPNDGTYN-ALAVLCEEGKVQEA 825
+ + + +PN +YN L LC EG+ ++A
Sbjct: 258 QFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKA 291
Score = 88.6 bits (218), Expect = 5e-15
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 1/183 (0%)
Frame = +1
Query: 280 KDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVV 459
+D +++A L+ +I KG KP+ L+ CK + +A + + G P+
Sbjct: 74 RDLRLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPA 133
Query: 460 SYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEM 639
S ++ ++C G A L+ +M + +TYN L+ L +HG +L++L++
Sbjct: 134 SCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKF 193
Query: 640 MRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNALAV-LCEEGKV 816
M+ PN +Y+ ++ KE D ++ LD+++ + PN +YN L LC+EG+
Sbjct: 194 MKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRT 253
Query: 817 QEA 825
+EA
Sbjct: 254 EEA 256
Score = 84.3 bits (207), Expect = 9e-14
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 34/201 (16%)
Frame = +1
Query: 34 SASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSL------------------ 159
+ASY +I +LCK G V ++ +D++ C PN TYN++
Sbjct: 342 AASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQS 401
Query: 160 ----------------VRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRG 291
+ LC GN + Q+L + + G VP+ +TYS L+ +
Sbjct: 402 LGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGM 461
Query: 292 VDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNI 471
+DEA+ + + +P++ ++N L+ G CK +TD ++ F + KG+ PN +Y I
Sbjct: 462 LDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTI 521
Query: 472 VLRSMCYEGRWDEANVLLSEM 534
++ + ++ + A +L E+
Sbjct: 522 IVEGIAHQEEMELAAAVLKEL 542
Score = 68.2 bits (165), Expect = 7e-09
Identities = 34/102 (33%), Positives = 57/102 (55%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G +PDS +Y+ LI LC G + AM++ +EE C P+ +N+L+ GLC S
Sbjct: 441 GFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLS 500
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEI 324
L V + +++KG +PN TY+ ++E ++ A +L E+
Sbjct: 501 LMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKEL 542
>ref|XP_008444287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Cucumis melo] gi|307135890|gb|ADN33755.1|
pentatricopeptide repeat-containing protein [Cucumis
melo subsp. melo]
Length = 566
Score = 451 bits (1160), Expect = e-124
Identities = 213/275 (77%), Positives = 247/275 (89%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMM+ SG IPD++SYTFL++ LC++GNVGYAMQLVDK+EE+G P NTVTYNSLVRGLC+H
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ+LDRL+QKGLVPN +TYSFLLEAAYK+RG DEA +LLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRT++A+ FR LPSKGF PNVVSYNI+LRS+C EGRW+EANVLL+EM G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
+ RSPS +TYNILI SLALHGRT+ ALEVLEEM+R+RFKP A+SYNPIIA CK+GK+D
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VVKCLDQM+YRH NPN+GTYNA+A LCEEG VQEA
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEA 395
Score = 136 bits (343), Expect = 2e-29
Identities = 82/268 (30%), Positives = 134/268 (50%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY L+ LC G A L+ ++ P+TVTYN L+ L +HG +H+
Sbjct: 267 GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
L+VL+ +++ P +Y+ ++ KD +D V+ LD+++ + PN +YN + T
Sbjct: 327 LEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIAT- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
C+EG EA ++L +K Y IV+ S+C +G A LL EM +P
Sbjct: 386 LCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L + G ++A+E+ +M KP+ +YN +I CK + D + +
Sbjct: 446 SFTYSSLIRGLCMEGMLNEAIEIF-SVMEENNKPDTENYNSLILGCCKSRRTDLALDVFE 504
Query: 739 QMIYRHVNPNDGTYNALAVLCEEGKVQE 822
M+ + PN+ TY L EG + E
Sbjct: 505 IMVGKGYLPNETTYTILV----EGIIHE 528
Score = 130 bits (326), Expect = 2e-27
Identities = 69/237 (29%), Positives = 127/237 (53%), Gaps = 1/237 (0%)
Frame = +1
Query: 118 EFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVD 297
E G P+ L+ LC ++ +++V++ ++ G++P+ +Y+FL+ + + V
Sbjct: 90 EKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVG 149
Query: 298 EAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVL 477
A++L+D++ G N V+YN L+ G C G ++++ L KG PN +Y+ +L
Sbjct: 150 YAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLL 209
Query: 478 RSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFK 657
+ E DEA+ LL E++ + P++++YN+L++ L GRT+DA+ + E+ F
Sbjct: 210 EAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFS 269
Query: 658 PNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL-AVLCEEGKVQEA 825
PN SYN ++ C EG+ + L +M +P+ TYN L L G+ + A
Sbjct: 270 PNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHA 326
Score = 109 bits (272), Expect = 3e-21
Identities = 57/207 (27%), Positives = 113/207 (54%), Gaps = 1/207 (0%)
Frame = +1
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
L+ +++KG P+VF + LL K + +A+++++ +I G P+ SY L++ C+
Sbjct: 85 LEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCR 144
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
+G A++ + G+ N V+YN ++R +C G ++ LL ++ + P+ T
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMI 747
Y+ L+ + D+A ++L+E++ +PN SYN ++ CKEG+ + ++ ++
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELP 264
Query: 748 YRHVNPNDGTYN-ALAVLCEEGKVQEA 825
+ +PN +YN L LC EG+ +EA
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEA 291
Score = 91.7 bits (226), Expect = 6e-16
Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 1/188 (0%)
Frame = +1
Query: 265 LEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGF 444
+E K+ + +A L+ ++ KG KP++ LL CK + +A++ + G
Sbjct: 69 VEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGI 128
Query: 445 DPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALE 624
P+ SY ++ S+C +G A L+ +M + +TYN L+ L +HG +L+
Sbjct: 129 IPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQ 188
Query: 625 VLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNALAV-LC 801
+L+ +++ PNA +Y+ ++ KE D K LD++I + PN +YN L LC
Sbjct: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLC 248
Query: 802 EEGKVQEA 825
+EG+ ++A
Sbjct: 249 KEGRTEDA 256
Score = 90.1 bits (222), Expect = 2e-15
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 34/212 (16%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSL------- 159
E M+ + P ++SY +I LCK G + ++ +D++ C PN TYN++
Sbjct: 331 EEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEG 390
Query: 160 ---------------------------VRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYS 258
+ LC GN + Q+L + + G P+ FTYS
Sbjct: 391 MVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYS 450
Query: 259 FLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSK 438
L+ + ++EA+ + ++ + KP+ +YN L+ G CK RTD A++ F + K
Sbjct: 451 SLIRGLCMEGMLNEAIEIFS-VMEENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGK 509
Query: 439 GFDPNVVSYNIVLRSMCYEGRWDEANVLLSEM 534
G+ PN +Y I++ + +E D A +L E+
Sbjct: 510 GYLPNETTYTILVEGIIHEKEMDLATKVLREL 541
>ref|XP_009371377.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Pyrus x bretschneideri]
Length = 567
Score = 451 bits (1159), Expect = e-124
Identities = 216/275 (78%), Positives = 246/275 (89%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMMV SG IPD+ASYTFL+N LCKRGN+GYAMQLV+K+EE+G P NTVTYNSLVRGLC+
Sbjct: 121 EMMVVSGIIPDAASYTFLVNYLCKRGNIGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCVR 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ+LDRL+QKGLVPNV+TYSFLLEAAYK+RGV+EA++LL EIIAKGGKPNLVSY
Sbjct: 181 GNLNQSLQLLDRLIQKGLVPNVYTYSFLLEAAYKERGVNEAMKLLQEIIAKGGKPNLVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRTDEA+ FFR+LPS GFDPNVVSYNIVLRS+CYEGRW+EANVLLSEM G
Sbjct: 241 NVLLTGLCKEGRTDEALRFFRSLPSMGFDPNVVSYNIVLRSLCYEGRWEEANVLLSEMEG 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
E R+PS++TYNILI SLALHGRT+ AL VL+EM+R RFKP A SYNPIIA+ CKEG VD
Sbjct: 301 EDRAPSIVTYNILIGSLALHGRTEHALGVLDEMLRGRFKPTAASYNPIIARLCKEGNVDG 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
V+CLDQMI+R NPN+GT+NA+AVLCE G V EA
Sbjct: 361 AVQCLDQMIHRRCNPNEGTFNAIAVLCERGLVPEA 395
Score = 137 bits (345), Expect = 9e-30
Identities = 81/270 (30%), Positives = 137/270 (50%), Gaps = 1/270 (0%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY ++ LC G A L+ ++E P+ VTYN L+ L +HG +H+
Sbjct: 267 GFDPNVVSYNIVLRSLCYEGRWEEANVLLSEMEGEDRAPSIVTYNILIGSLALHGRTEHA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
L VLD +++ P +Y+ ++ K+ VD AV+ LD++I + PN ++N +
Sbjct: 327 LGVLDEMLRGRFKPTAASYNPIIARLCKEGNVDGAVQCLDQMIHRRCNPNEGTFNAIAV- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
C+ G EA ++L +K + Y V+ S+C +G A +L EM +P
Sbjct: 386 LCERGLVPEAFSIIQSLCNKQKFSSFEFYKNVISSLCRKGNTFPAFQILYEMTKHGFTPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L L G D+A+E+ + M + +P+ ++N +I FCK + D + +
Sbjct: 446 SYTYSSLIRGLCLEGMLDEAMEIFKVMEENNVRPDTDNFNALILGFCKSRRTDLSFQVFE 505
Query: 739 QMIYRHVNPNDGTYNALAV-LCEEGKVQEA 825
MI + PN+ TY L + EG+++ A
Sbjct: 506 MMIEKGCMPNEMTYTILVEGIAHEGELELA 535
Score = 123 bits (308), Expect = 2e-25
Identities = 67/235 (28%), Positives = 123/235 (52%), Gaps = 1/235 (0%)
Frame = +1
Query: 124 GCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEA 303
G P+ L+ LC ++ +++V++ ++ G++P+ +Y+FL+ K + A
Sbjct: 92 GQKPDVAQATQLLYDLCKANKMRKAVRVIEMMVVSGIIPDAASYTFLVNYLCKRGNIGYA 151
Query: 304 VRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRS 483
++L++++ G N V+YN L+ G C G +++++ L KG PNV +Y+ +L +
Sbjct: 152 MQLVEKMEEYGYPTNTVTYNSLVRGLCVRGNLNQSLQLLDRLIQKGLVPNVYTYSFLLEA 211
Query: 484 MCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPN 663
E +EA LL E++ + P++++YN+L++ L GRTD+AL + F PN
Sbjct: 212 AYKERGVNEAMKLLQEIIAKGGKPNLVSYNVLLTGLCKEGRTDEALRFFRSLPSMGFDPN 271
Query: 664 ATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL-AVLCEEGKVQEA 825
SYN ++ C EG+ + L +M P+ TYN L L G+ + A
Sbjct: 272 VVSYNIVLRSLCYEGRWEEANVLLSEMEGEDRAPSIVTYNILIGSLALHGRTEHA 326
Score = 109 bits (273), Expect = 2e-21
Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 1/207 (0%)
Frame = +1
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
L+ ++ KG P+V + LL K + +AVR+++ ++ G P+ SY L+ CK
Sbjct: 85 LESMVGKGQKPDVAQATQLLYDLCKANKMRKAVRVIEMMVVSGIIPDAASYTFLVNYLCK 144
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
G A++ + G+ N V+YN ++R +C G +++ LL ++ + P+V T
Sbjct: 145 RGNIGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCVRGNLNQSLQLLDRLIQKGLVPNVYT 204
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMI 747
Y+ L+ + ++A+++L+E++ KPN SYN ++ CKEG+ D ++ +
Sbjct: 205 YSFLLEAAYKERGVNEAMKLLQEIIAKGGKPNLVSYNVLLTGLCKEGRTDEALRFFRSLP 264
Query: 748 YRHVNPNDGTYN-ALAVLCEEGKVQEA 825
+PN +YN L LC EG+ +EA
Sbjct: 265 SMGFDPNVVSYNIVLRSLCYEGRWEEA 291
Score = 94.4 bits (233), Expect = 9e-17
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 34/203 (16%)
Frame = +1
Query: 28 PDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSL---------------- 159
P +ASY +I +LCK GNV A+Q +D++ C PN T+N++
Sbjct: 340 PTAASYNPIIARLCKEGNVDGAVQCLDQMIHRRCNPNEGTFNAIAVLCERGLVPEAFSII 399
Query: 160 ------------------VRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKD 285
+ LC GN + Q+L + + G P+ +TYS L+ +
Sbjct: 400 QSLCNKQKFSSFEFYKNVISSLCRKGNTFPAFQILYEMTKHGFTPDSYTYSSLIRGLCLE 459
Query: 286 RGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSY 465
+DEA+ + + +P+ ++N L+ GFCK RTD + + F + KG PN ++Y
Sbjct: 460 GMLDEAMEIFKVMEENNVRPDTDNFNALILGFCKSRRTDLSFQVFEMMIEKGCMPNEMTY 519
Query: 466 NIVLRSMCYEGRWDEANVLLSEM 534
I++ + +EG + A +L E+
Sbjct: 520 TILVEGIAHEGELELAARVLKEL 542
Score = 80.5 bits (197), Expect = 1e-12
Identities = 42/146 (28%), Positives = 81/146 (55%)
Frame = +1
Query: 43 YTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLM 222
Y +I+ LC++GN A Q++ ++ + G P++ TY+SL+RGLC+ G L ++++ +
Sbjct: 414 YKNVISSLCRKGNTFPAFQILYEMTKHGFTPDSYTYSSLIRGLCLEGMLDEAMEIFKVME 473
Query: 223 QKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTD 402
+ + P+ ++ L+ K R D + ++ + +I KG PN ++Y +L+ G EG +
Sbjct: 474 ENNVRPDTDNFNALILGFCKSRRTDLSFQVFEMMIEKGCMPNEMTYTILVEGIAHEGELE 533
Query: 403 EAVEFFRNLPSKGFDPNVVSYNIVLR 480
A + L + +V+S N V R
Sbjct: 534 LAARVLKELHLR----HVMSSNTVER 555
Score = 69.3 bits (168), Expect = 3e-09
Identities = 36/106 (33%), Positives = 58/106 (54%)
Frame = +1
Query: 7 MVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGN 186
M G PDS +Y+ LI LC G + AM++ +EE P+T +N+L+ G C
Sbjct: 437 MTKHGFTPDSYTYSSLIRGLCLEGMLDEAMEIFKVMEENNVRPDTDNFNALILGFCKSRR 496
Query: 187 LQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEI 324
S QV + +++KG +PN TY+ L+E + ++ A R+L E+
Sbjct: 497 TDLSFQVFEMMIEKGCMPNEMTYTILVEGIAHEGELELAARVLKEL 542
>ref|XP_010062706.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Eucalyptus grandis]
gi|629104364|gb|KCW69833.1| hypothetical protein
EUGRSUZ_F03183 [Eucalyptus grandis]
Length = 567
Score = 449 bits (1156), Expect = e-124
Identities = 210/275 (76%), Positives = 248/275 (90%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMM SG IPD+ASYT+L+N LCK+GNVG+AMQLV+K+EE+G P NTVTYNS++RGLC+H
Sbjct: 121 EMMATSGIIPDAASYTYLVNHLCKKGNVGHAMQLVEKMEEYGYPTNTVTYNSIIRGLCMH 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GN SLQ+LD+LM+KGLVPN FTYSFLLEAAYK+RGV EA+RLLDEI+AKGGKPNLVSY
Sbjct: 181 GNFSRSLQLLDKLMRKGLVPNAFTYSFLLEAAYKERGVKEAMRLLDEIVAKGGKPNLVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEG+T+EA++FFRNLPS+GF PNVVSYNI+LRS+C EGRW+EAN LL+EM G
Sbjct: 241 NVLLTGLCKEGKTEEAIKFFRNLPSRGFSPNVVSYNILLRSLCCEGRWEEANELLAEMDG 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
R+PS++TYNILI+SLALHG+T+ ALEVLEEM + +FKP ATSYNPIIA+ CKEGKVD
Sbjct: 301 GDRAPSIVTYNILITSLALHGKTEQALEVLEEMTQGQFKPTATSYNPIIARLCKEGKVDL 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VVKCLDQMIYR NPN+GTYNA+A+LCEEGK QEA
Sbjct: 361 VVKCLDQMIYRRCNPNEGTYNAVAILCEEGKTQEA 395
Score = 135 bits (339), Expect = 5e-29
Identities = 80/257 (31%), Positives = 127/257 (49%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY L+ LC G A +L+ +++ P+ VTYN L+ L +HG + +
Sbjct: 267 GFSPNVVSYNILLRSLCCEGRWEEANELLAEMDGGDRAPSIVTYNILITSLALHGKTEQA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
L+VL+ + Q P +Y+ ++ K+ VD V+ LD++I + PN +YN +
Sbjct: 327 LEVLEEMTQGQFKPTATSYNPIIARLCKEGKVDLVVKCLDQMIYRRCNPNEGTYNAVAI- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
C+EG+T EA +L SK Y V+ S+C +G A LL EM +P
Sbjct: 386 LCEEGKTQEAFSIIHSLGSKQNSTTREFYKTVISSLCRKGNTYAAFQLLYEMTKHGFTPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L L G D+A+ + + KP+ +YN ++ FCK + D ++
Sbjct: 446 SYTYSSLIRGLCLEGMLDEAITIFGILEEYEQKPDVDNYNALLLGFCKSQRTDLSLEAFV 505
Query: 739 QMIYRHVNPNDGTYNAL 789
MI + PN+ TY L
Sbjct: 506 MMIEKGNMPNETTYTIL 522
Score = 120 bits (302), Expect = 9e-25
Identities = 68/246 (27%), Positives = 126/246 (51%), Gaps = 1/246 (0%)
Frame = +1
Query: 91 AMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLE 270
A Q +D + G P+ L+ LC L+ +++V++ + G++P+ +Y++L+
Sbjct: 81 AFQNLDYMVARGHKPDVNQATQLLYDLCKANKLKRAIRVMEMMATSGIIPDAASYTYLVN 140
Query: 271 AAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDP 450
K V A++L++++ G N V+YN ++ G C G +++ L KG P
Sbjct: 141 HLCKKGNVGHAMQLVEKMEEYGYPTNTVTYNSIIRGLCMHGNFSRSLQLLDKLMRKGLVP 200
Query: 451 NVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVL 630
N +Y+ +L + E EA LL E+V + P++++YN+L++ L G+T++A++
Sbjct: 201 NAFTYSFLLEAAYKERGVKEAMRLLDEIVAKGGKPNLVSYNVLLTGLCKEGKTEEAIKFF 260
Query: 631 EEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNALAV-LCEE 807
+ F PN SYN ++ C EG+ + + L +M P+ TYN L L
Sbjct: 261 RNLPSRGFSPNVVSYNILLRSLCCEGRWEEANELLAEMDGGDRAPSIVTYNILITSLALH 320
Query: 808 GKVQEA 825
GK ++A
Sbjct: 321 GKTEQA 326
Score = 112 bits (281), Expect = 2e-22
Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 1/214 (0%)
Frame = +1
Query: 187 LQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNV 366
L + Q LD ++ +G P+V + LL K + A+R+++ + G P+ SY
Sbjct: 78 LNDAFQNLDYMVARGHKPDVNQATQLLYDLCKANKLKRAIRVMEMMATSGIIPDAASYTY 137
Query: 367 LLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGET 546
L+ CK+G A++ + G+ N V+YN ++R +C G + + LL +++ +
Sbjct: 138 LVNHLCKKGNVGHAMQLVEKMEEYGYPTNTVTYNSIIRGLCMHGNFSRSLQLLDKLMRKG 197
Query: 547 RSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVV 726
P+ TY+ L+ + +A+ +L+E++ KPN SYN ++ CKEGK + +
Sbjct: 198 LVPNAFTYSFLLEAAYKERGVKEAMRLLDEIVAKGGKPNLVSYNVLLTGLCKEGKTEEAI 257
Query: 727 KCLDQMIYRHVNPNDGTYN-ALAVLCEEGKVQEA 825
K + R +PN +YN L LC EG+ +EA
Sbjct: 258 KFFRNLPSRGFSPNVVSYNILLRSLCCEGRWEEA 291
Score = 101 bits (251), Expect = 7e-19
Identities = 55/183 (30%), Positives = 98/183 (53%), Gaps = 1/183 (0%)
Frame = +1
Query: 280 KDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVV 459
KD +++A + LD ++A+G KP++ LL CK + A+ + + G P+
Sbjct: 74 KDLRLNDAFQNLDYMVARGHKPDVNQATQLLYDLCKANKLKRAIRVMEMMATSGIIPDAA 133
Query: 460 SYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEM 639
SY ++ +C +G A L+ +M + +TYN +I L +HG +L++L+++
Sbjct: 134 SYTYLVNHLCKKGNVGHAMQLVEKMEEYGYPTNTVTYNSIIRGLCMHGNFSRSLQLLDKL 193
Query: 640 MRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNALAV-LCEEGKV 816
MR PNA +Y+ ++ KE V ++ LD+++ + PN +YN L LC+EGK
Sbjct: 194 MRKGLVPNAFTYSFLLEAAYKERGVKEAMRLLDEIVAKGGKPNLVSYNVLLTGLCKEGKT 253
Query: 817 QEA 825
+EA
Sbjct: 254 EEA 256
Score = 99.0 bits (245), Expect = 4e-18
Identities = 68/227 (29%), Positives = 105/227 (46%)
Frame = +1
Query: 28 PDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQV 207
P + SY +I +LCK G V ++ +D++ C PN TYN+ V LC G Q + +
Sbjct: 340 PTATSYNPIIARLCKEGKVDLVVKCLDQMIYRRCNPNEGTYNA-VAILCEEGKTQEAFSI 398
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
+ L K Y ++ + + A +LL E+ G P+ +Y+ L+ G C
Sbjct: 399 IHSLGSKQNSTTREFYKTVISSLCRKGNTYAAFQLLYEMTKHGFTPDSYTYSSLIRGLCL 458
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
EG DEA+ F L P+V +YN +L C R D + M+ + P+ T
Sbjct: 459 EGMLDEAITIFGILEEYEQKPDVDNYNALLLGFCKSQRTDLSLEAFVMMIEKGNMPNETT 518
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEG 708
Y IL+ LA A EVL+E++ RF T ++ Q+ EG
Sbjct: 519 YTILVEGLAHEDEMGLAAEVLKELLAKRFLSQNT-VERLVMQYHLEG 564
>ref|XP_011653982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Cucumis sativus]
gi|700199784|gb|KGN54942.1| hypothetical protein
Csa_4G613170 [Cucumis sativus]
Length = 566
Score = 449 bits (1155), Expect = e-123
Identities = 213/275 (77%), Positives = 246/275 (89%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMM+ SG IPD+ASYTFL++ LC++GNVGYAMQLVDK+EE+G P NT TYNSLVRGLC+H
Sbjct: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ+LDRL+QKGLVPN +TYSFLLEAAYK+RG DEA +LLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRT++A++ FR LPSKGF PNVVSYNI+LRS+C EGRW+EANVLL+EM G
Sbjct: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
+ RSPS +TYNILI SL LHGRT+ ALEVLEEM+R+RFKP A+SYNPIIA+ CK+ KVD
Sbjct: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VVKCLDQM+YRH NPN+GTYNA+A LCEEG VQEA
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEA 395
Score = 134 bits (337), Expect = 8e-29
Identities = 82/268 (30%), Positives = 134/268 (50%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY L+ LC G A L+ +++ P+TVTYN L+ L +HG +H+
Sbjct: 267 GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
L+VL+ +++ P +Y+ ++ KDR VD V+ LD+++ + PN +YN + T
Sbjct: 327 LEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
C+EG EA ++L +K Y IV+ S+C +G A LL EM +P
Sbjct: 386 LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L + G ++A+E+ +M K + +YN +I CK + D + +
Sbjct: 446 SFTYSSLIRGLCMEGMLNEAIEIF-SVMEENIKLDTENYNSLILGCCKSRRTDLALDVFE 504
Query: 739 QMIYRHVNPNDGTYNALAVLCEEGKVQE 822
M+ + N+ TY L EG + E
Sbjct: 505 IMVGKGYLANETTYTILV----EGIIHE 528
Score = 129 bits (325), Expect = 2e-27
Identities = 68/245 (27%), Positives = 131/245 (53%)
Frame = +1
Query: 55 INQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGL 234
++Q K + A ++ + E G P+ L+ LC ++ +++V++ ++ G+
Sbjct: 69 LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128
Query: 235 VPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVE 414
+P+ +Y+FL+ + + V A++L+D++ G N +YN L+ G C G ++++
Sbjct: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188
Query: 415 FFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLA 594
L KG PN +Y+ +L + E DEA+ LL E++ + P++++YN+L++ L
Sbjct: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC 248
Query: 595 LHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDG 774
GRT+DA+++ E+ F PN SYN ++ C EG+ + L +M +P+
Sbjct: 249 KEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTV 308
Query: 775 TYNAL 789
TYN L
Sbjct: 309 TYNIL 313
Score = 80.1 bits (196), Expect = 2e-12
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 34/212 (16%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSL------- 159
E M+ + P ++SY +I +LCK V ++ +D++ C PN TYN++
Sbjct: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEG 390
Query: 160 ---------------------------VRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYS 258
+ LC GN + Q+L + + G P+ FTYS
Sbjct: 391 MVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYS 450
Query: 259 FLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSK 438
L+ + ++EA+ + ++ + K + +YN L+ G CK RTD A++ F + K
Sbjct: 451 SLIRGLCMEGMLNEAIEIFS-VMEENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGK 509
Query: 439 GFDPNVVSYNIVLRSMCYEGRWDEANVLLSEM 534
G+ N +Y I++ + +E D A +L E+
Sbjct: 510 GYLANETTYTILVEGIIHEKEMDLATEVLREL 541
>ref|XP_008383030.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Malus domestica]
gi|657981998|ref|XP_008383031.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Malus domestica]
Length = 567
Score = 448 bits (1153), Expect = e-123
Identities = 215/275 (78%), Positives = 244/275 (88%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMMV SG IPD+ASYTFL+N LCKRGN+GYAMQLV+K+EE+G P NTVTYNSLVRGLC+
Sbjct: 121 EMMVVSGIIPDAASYTFLVNYLCKRGNIGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCVR 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ+LDRL+QKGLVPNV+TYSFLLEAAYK+RGV+EA++LL EIIAKGGKPNLVSY
Sbjct: 181 GNLNQSLQLLDRLIQKGLVPNVYTYSFLLEAAYKERGVNEAMKLLQEIIAKGGKPNLVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRTDEA+ FFR+LPS GFDPNVVSYNIVLRS+CYEGRW+EANVLLSEM G
Sbjct: 241 NVLLTGLCKEGRTDEALRFFRSLPSMGFDPNVVSYNIVLRSLCYEGRWEEANVLLSEMEG 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
E R+PS++TYNILI SLALHGRT+ AL VL+EM+R RFKP A SYNPII CKEG VD
Sbjct: 301 EDRAPSIVTYNILIGSLALHGRTEHALGVLDEMLRGRFKPTAASYNPIIGHLCKEGNVDG 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VKCLDQMI+R NPN+GT+NA+AVLCE+G V A
Sbjct: 361 AVKCLDQMIHRRCNPNEGTFNAIAVLCEKGLVPAA 395
Score = 132 bits (333), Expect = 2e-28
Identities = 78/270 (28%), Positives = 137/270 (50%), Gaps = 1/270 (0%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY ++ LC G A L+ ++E P+ VTYN L+ L +HG +H+
Sbjct: 267 GFDPNVVSYNIVLRSLCYEGRWEEANVLLSEMEGEDRAPSIVTYNILIGSLALHGRTEHA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
L VLD +++ P +Y+ ++ K+ VD AV+ LD++I + PN ++N +
Sbjct: 327 LGVLDEMLRGRFKPTAASYNPIIGHLCKEGNVDGAVKCLDQMIHRRCNPNEGTFNAIAV- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
C++G A ++L +K + Y V+ S+C +G A +L E+ +P
Sbjct: 386 LCEKGLVPAAFSIIQSLCNKQKCSSYEFYKNVISSLCRKGNTFPAFQILYEVTKHGFTPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L L G D+A+E+ + M + +P+ ++N +I FCK + D + +
Sbjct: 446 SYTYSSLIRGLCLEGMLDEAIEIFKVMEENNLRPDTDNFNALILGFCKSRRTDLSFQVFE 505
Query: 739 QMIYRHVNPNDGTYNALAV-LCEEGKVQEA 825
M+ + PN+ TY L + EG+++ A
Sbjct: 506 MMVEKGRMPNEMTYTILVEGIAHEGELELA 535
Score = 123 bits (308), Expect = 2e-25
Identities = 67/235 (28%), Positives = 123/235 (52%), Gaps = 1/235 (0%)
Frame = +1
Query: 124 GCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEA 303
G P+ L+ LC ++ +++V++ ++ G++P+ +Y+FL+ K + A
Sbjct: 92 GQKPDVAQATQLLYDLCKANKMRKAVRVIEMMVVSGIIPDAASYTFLVNYLCKRGNIGYA 151
Query: 304 VRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRS 483
++L++++ G N V+YN L+ G C G +++++ L KG PNV +Y+ +L +
Sbjct: 152 MQLVEKMEEYGYPTNTVTYNSLVRGLCVRGNLNQSLQLLDRLIQKGLVPNVYTYSFLLEA 211
Query: 484 MCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPN 663
E +EA LL E++ + P++++YN+L++ L GRTD+AL + F PN
Sbjct: 212 AYKERGVNEAMKLLQEIIAKGGKPNLVSYNVLLTGLCKEGRTDEALRFFRSLPSMGFDPN 271
Query: 664 ATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL-AVLCEEGKVQEA 825
SYN ++ C EG+ + L +M P+ TYN L L G+ + A
Sbjct: 272 VVSYNIVLRSLCYEGRWEEANVLLSEMEGEDRAPSIVTYNILIGSLALHGRTEHA 326
Score = 109 bits (273), Expect = 2e-21
Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 1/207 (0%)
Frame = +1
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
L+ ++ KG P+V + LL K + +AVR+++ ++ G P+ SY L+ CK
Sbjct: 85 LESMVGKGQKPDVAQATQLLYDLCKANKMRKAVRVIEMMVVSGIIPDAASYTFLVNYLCK 144
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
G A++ + G+ N V+YN ++R +C G +++ LL ++ + P+V T
Sbjct: 145 RGNIGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCVRGNLNQSLQLLDRLIQKGLVPNVYT 204
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMI 747
Y+ L+ + ++A+++L+E++ KPN SYN ++ CKEG+ D ++ +
Sbjct: 205 YSFLLEAAYKERGVNEAMKLLQEIIAKGGKPNLVSYNVLLTGLCKEGRTDEALRFFRSLP 264
Query: 748 YRHVNPNDGTYN-ALAVLCEEGKVQEA 825
+PN +YN L LC EG+ +EA
Sbjct: 265 SMGFDPNVVSYNIVLRSLCYEGRWEEA 291
Score = 103 bits (257), Expect = 2e-19
Identities = 59/204 (28%), Positives = 103/204 (50%)
Frame = +1
Query: 28 PDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQV 207
P +ASY +I LCK GNV A++ +D++ C PN T+N++ LC G + + +
Sbjct: 340 PTAASYNPIIGHLCKEGNVDGAVKCLDQMIHRRCNPNEGTFNAIAV-LCEKGLVPAAFSI 398
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
+ L K + Y ++ + + A ++L E+ G P+ +Y+ L+ G C
Sbjct: 399 IQSLCNKQKCSSYEFYKNVISSLCRKGNTFPAFQILYEVTKHGFTPDSYTYSSLIRGLCL 458
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
EG DEA+E F+ + P+ ++N ++ C R D + + MV + R P+ +T
Sbjct: 459 EGMLDEAIEIFKVMEENNLRPDTDNFNALILGFCKSRRTDLSFQVFEMMVEKGRMPNEMT 518
Query: 568 YNILISSLALHGRTDDALEVLEEM 639
Y IL+ +A G + A VL+E+
Sbjct: 519 YTILVEGIAHEGELELAARVLKEL 542
Score = 81.6 bits (200), Expect = 6e-13
Identities = 42/146 (28%), Positives = 81/146 (55%)
Frame = +1
Query: 43 YTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLM 222
Y +I+ LC++GN A Q++ ++ + G P++ TY+SL+RGLC+ G L ++++ +
Sbjct: 414 YKNVISSLCRKGNTFPAFQILYEVTKHGFTPDSYTYSSLIRGLCLEGMLDEAIEIFKVME 473
Query: 223 QKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTD 402
+ L P+ ++ L+ K R D + ++ + ++ KG PN ++Y +L+ G EG +
Sbjct: 474 ENNLRPDTDNFNALILGFCKSRRTDLSFQVFEMMVEKGRMPNEMTYTILVEGIAHEGELE 533
Query: 403 EAVEFFRNLPSKGFDPNVVSYNIVLR 480
A + L + +V+S N V R
Sbjct: 534 LAARVLKELHLR----HVMSLNTVER 555
Score = 67.0 bits (162), Expect = 2e-08
Identities = 34/102 (33%), Positives = 57/102 (55%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G PDS +Y+ LI LC G + A+++ +EE P+T +N+L+ G C S
Sbjct: 441 GFTPDSYTYSSLIRGLCLEGMLDEAIEIFKVMEENNLRPDTDNFNALILGFCKSRRTDLS 500
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEI 324
QV + +++KG +PN TY+ L+E + ++ A R+L E+
Sbjct: 501 FQVFEMMVEKGRMPNEMTYTILVEGIAHEGELELAARVLKEL 542
>ref|XP_012441071.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Gossypium raimondii]
gi|763794400|gb|KJB61396.1| hypothetical protein
B456_009G354800 [Gossypium raimondii]
Length = 568
Score = 446 bits (1148), Expect = e-123
Identities = 216/275 (78%), Positives = 247/275 (89%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMMV SG IPD+ASYTFL+N LCKRGNVG+AMQLV+K+E G P NTVTYNSLVRGLC+H
Sbjct: 121 EMMVDSGIIPDAASYTFLVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL+ SLQ+LDRL+QKGLVPN FTYSFLLEAAYK++GV+EA +LLDEIIAKGGKPNLVSY
Sbjct: 181 GNLKQSLQLLDRLIQKGLVPNEFTYSFLLEAAYKEKGVNEATKLLDEIIAKGGKPNLVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRTDEA+ FFR+LP+KGF+PNVVSYNIVLR++CYEGRW EAN LL+EM G
Sbjct: 241 NVLLTGLCKEGRTDEAIRFFRDLPAKGFNPNVVSYNIVLRNLCYEGRWKEANELLAEMDG 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
+ RSPSV+TYNILI SLALHGRT A++VL+EM+R RFK +ATSYNPIIAQ C+E KVD
Sbjct: 301 DDRSPSVVTYNILIGSLALHGRTYHAMDVLDEMIRGRFKVSATSYNPIIAQLCQEEKVDL 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VVKCLDQMIYR PN+GTYNA+AVLCE+G VQEA
Sbjct: 361 VVKCLDQMIYRRCKPNEGTYNAIAVLCEQGMVQEA 395
Score = 139 bits (350), Expect = 2e-30
Identities = 82/270 (30%), Positives = 137/270 (50%), Gaps = 1/270 (0%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY ++ LC G A +L+ +++ P+ VTYN L+ L +HG H+
Sbjct: 267 GFNPNVVSYNIVLRNLCYEGRWKEANELLAEMDGDDRSPSVVTYNILIGSLALHGRTYHA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
+ VLD +++ + +Y+ ++ ++ VD V+ LD++I + KPN +YN +
Sbjct: 327 MDVLDEMIRGRFKVSATSYNPIIAQLCQEEKVDLVVKCLDQMIYRRCKPNEGTYNAIAV- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
C++G EA F++L SK Y V+ S+C +G A LL EM +P
Sbjct: 386 LCEQGMVQEAFSIFQSLASKQSSSPNDFYKSVISSLCRKGNTYPAFQLLYEMTKSGFTPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L L G A+++ M S FKP+ ++N +I FCK + D +K +
Sbjct: 446 SYTYSSLIRGLCLEGMLQAAMQIFIVMEESNFKPDVDNFNALILGFCKSHRTDLSLKVFE 505
Query: 739 QMIYRHVNPNDGTYNALAV-LCEEGKVQEA 825
+I + PN+ TY L + EG+++ A
Sbjct: 506 MLIEKGYMPNETTYTILVEGIAHEGQMELA 535
Score = 128 bits (321), Expect = 6e-27
Identities = 66/222 (29%), Positives = 120/222 (54%)
Frame = +1
Query: 124 GCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEA 303
G P+ V L+ LC ++ S++V++ ++ G++P+ +Y+FL+ K V A
Sbjct: 92 GQKPDVVQATQLLYDLCKVNKMKKSIRVMEMMVDSGIIPDAASYTFLVNHLCKRGNVGHA 151
Query: 304 VRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRS 483
++L++++ A G N V+YN L+ G C G ++++ L KG PN +Y+ +L +
Sbjct: 152 MQLVEKMEAHGYPTNTVTYNSLVRGLCMHGNLKQSLQLLDRLIQKGLVPNEFTYSFLLEA 211
Query: 484 MCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPN 663
E +EA LL E++ + P++++YN+L++ L GRTD+A+ ++ F PN
Sbjct: 212 AYKEKGVNEATKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTDEAIRFFRDLPAKGFNPN 271
Query: 664 ATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL 789
SYN ++ C EG+ + L +M +P+ TYN L
Sbjct: 272 VVSYNIVLRNLCYEGRWKEANELLAEMDGDDRSPSVVTYNIL 313
Score = 108 bits (269), Expect = 6e-21
Identities = 57/207 (27%), Positives = 109/207 (52%), Gaps = 1/207 (0%)
Frame = +1
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
++ ++ KG P+V + LL K + +++R+++ ++ G P+ SY L+ CK
Sbjct: 85 MEYMVGKGQKPDVVQATQLLYDLCKVNKMKKSIRVMEMMVDSGIIPDAASYTFLVNHLCK 144
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
G A++ + + G+ N V+YN ++R +C G ++ LL ++ + P+ T
Sbjct: 145 RGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMHGNLKQSLQLLDRLIQKGLVPNEFT 204
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMI 747
Y+ L+ + ++A ++L+E++ KPN SYN ++ CKEG+ D ++ +
Sbjct: 205 YSFLLEAAYKEKGVNEATKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTDEAIRFFRDLP 264
Query: 748 YRHVNPNDGTYN-ALAVLCEEGKVQEA 825
+ NPN +YN L LC EG+ +EA
Sbjct: 265 AKGFNPNVVSYNIVLRNLCYEGRWKEA 291
Score = 86.3 bits (212), Expect = 2e-14
Identities = 49/178 (27%), Positives = 89/178 (50%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
+ M+ P+ +Y I LC++G V A + L Y S++ LC
Sbjct: 366 DQMIYRRCKPNEGTYN-AIAVLCEQGMVQEAFSIFQSLASKQSSSPNDFYKSVISSLCRK 424
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GN + Q+L + + G P+ +TYS L+ + + A+++ + KP++ ++
Sbjct: 425 GNTYPAFQLLYEMTKSGFTPDSYTYSSLIRGLCLEGMLQAAMQIFIVMEESNFKPDVDNF 484
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEM 534
N L+ GFCK RTD +++ F L KG+ PN +Y I++ + +EG+ + A +L E+
Sbjct: 485 NALILGFCKSHRTDLSLKVFEMLIEKGYMPNETTYTILVEGIAHEGQMELAAQVLKEL 542
Score = 85.9 bits (211), Expect = 3e-14
Identities = 45/146 (30%), Positives = 83/146 (56%)
Frame = +1
Query: 43 YTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLM 222
Y +I+ LC++GN A QL+ ++ + G P++ TY+SL+RGLC+ G LQ ++Q+ +
Sbjct: 414 YKSVISSLCRKGNTYPAFQLLYEMTKSGFTPDSYTYSSLIRGLCLEGMLQAAMQIFIVME 473
Query: 223 QKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTD 402
+ P+V ++ L+ K D ++++ + +I KG PN +Y +L+ G EG+ +
Sbjct: 474 ESNFKPDVDNFNALILGFCKSHRTDLSLKVFEMLIEKGYMPNETTYTILVEGIAHEGQME 533
Query: 403 EAVEFFRNLPSKGFDPNVVSYNIVLR 480
A + + L + VVS ++V R
Sbjct: 534 LAAQVLKELHMR----EVVSQHVVER 555
Score = 61.2 bits (147), Expect = 9e-07
Identities = 33/135 (24%), Positives = 65/135 (48%)
Frame = +1
Query: 385 KEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVI 564
+E R +A + KG P+VV +L +C + ++ ++ MV P
Sbjct: 74 RELRLSDAYFHMEYMVGKGQKPDVVQATQLLYDLCKVNKMKKSIRVMEMMVDSGIIPDAA 133
Query: 565 TYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQM 744
+Y L++ L G A++++E+M + N +YN ++ C G + ++ LD++
Sbjct: 134 SYTFLVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMHGNLKQSLQLLDRL 193
Query: 745 IYRHVNPNDGTYNAL 789
I + + PN+ TY+ L
Sbjct: 194 IQKGLVPNEFTYSFL 208
>ref|XP_007022279.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508721907|gb|EOY13804.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 568
Score = 446 bits (1147), Expect = e-123
Identities = 214/275 (77%), Positives = 246/275 (89%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMMV SG IPD+ASYTFL+N LCKRGNVG+AMQLV+K+E G P NTVTYNSLVRGLC+H
Sbjct: 121 EMMVNSGIIPDAASYTFLVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ+LD+L+Q+GLVPN FTYSFLLEAAYK++GV+EA++LLD+IIAKGGKPNLVSY
Sbjct: 181 GNLNQSLQLLDKLIQRGLVPNAFTYSFLLEAAYKEKGVNEAMKLLDDIIAKGGKPNLVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRTDEA+ FFRNLP+KGFDPNVVSYNI+LR++CYEG+W EAN LL+EM G
Sbjct: 241 NVLLTGLCKEGRTDEAIRFFRNLPAKGFDPNVVSYNILLRNLCYEGQWKEANELLAEMDG 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
E RSPSV+TYNILI SLALHGRT+ AL+VL+EM+R RFK ATSYNPIIA+ C+E KVD
Sbjct: 301 EDRSPSVVTYNILIGSLALHGRTEHALDVLDEMIRGRFKATATSYNPIIARLCQEKKVDL 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VVKCLDQMIYR PN+GTYNA AVLCE+G VQEA
Sbjct: 361 VVKCLDQMIYRRCKPNEGTYNATAVLCEQGMVQEA 395
Score = 147 bits (370), Expect = 1e-32
Identities = 85/270 (31%), Positives = 140/270 (51%), Gaps = 1/270 (0%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY L+ LC G A +L+ +++ P+ VTYN L+ L +HG +H+
Sbjct: 267 GFDPNVVSYNILLRNLCYEGQWKEANELLAEMDGEDRSPSVVTYNILIGSLALHGRTEHA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
L VLD +++ +Y+ ++ +++ VD V+ LD++I + KPN +YN
Sbjct: 327 LDVLDEMIRGRFKATATSYNPIIARLCQEKKVDLVVKCLDQMIYRRCKPNEGTYNATAV- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
C++G EA ++L SK P+ Y V+ S+C +G A LL EM +P
Sbjct: 386 LCEQGMVQEAFSIIQSLGSKQSSPSHDFYKSVISSLCRKGNTYPAFQLLYEMTKSGFNPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L L G +ALE++ M S ++P+ ++N +I FCK + D +K +
Sbjct: 446 SYTYSSLIRGLCLEGMLQEALEIVIVMEESNYRPDVDNFNALILGFCKSHRTDLSLKVFE 505
Query: 739 QMIYRHVNPNDGTYNALAV-LCEEGKVQEA 825
+I + PN+ TY L + EGK++ A
Sbjct: 506 MIIEKGYMPNETTYTILVEGIAHEGKIELA 535
Score = 125 bits (314), Expect = 4e-26
Identities = 67/235 (28%), Positives = 124/235 (52%), Gaps = 1/235 (0%)
Frame = +1
Query: 124 GCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEA 303
G P+ L+ LC ++ S++VL+ ++ G++P+ +Y+FL+ K V A
Sbjct: 92 GQKPDVAQATQLLYDLCKANKMKKSIRVLEMMVNSGIIPDAASYTFLVNHLCKRGNVGHA 151
Query: 304 VRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRS 483
++L++++ A G N V+YN L+ G C G +++++ L +G PN +Y+ +L +
Sbjct: 152 MQLVEKMEAHGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLIQRGLVPNAFTYSFLLEA 211
Query: 484 MCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPN 663
E +EA LL +++ + P++++YN+L++ L GRTD+A+ + F PN
Sbjct: 212 AYKEKGVNEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTDEAIRFFRNLPAKGFDPN 271
Query: 664 ATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL-AVLCEEGKVQEA 825
SYN ++ C EG+ + L +M +P+ TYN L L G+ + A
Sbjct: 272 VVSYNILLRNLCYEGQWKEANELLAEMDGEDRSPSVVTYNILIGSLALHGRTEHA 326
Score = 107 bits (268), Expect = 8e-21
Identities = 56/207 (27%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Frame = +1
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
++ ++ KG P+V + LL K + +++R+L+ ++ G P+ SY L+ CK
Sbjct: 85 MEYMVGKGQKPDVAQATQLLYDLCKANKMKKSIRVLEMMVNSGIIPDAASYTFLVNHLCK 144
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
G A++ + + G+ N V+YN ++R +C G +++ LL +++ P+ T
Sbjct: 145 RGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLIQRGLVPNAFT 204
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMI 747
Y+ L+ + ++A+++L++++ KPN SYN ++ CKEG+ D ++ +
Sbjct: 205 YSFLLEAAYKEKGVNEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTDEAIRFFRNLP 264
Query: 748 YRHVNPNDGTYN-ALAVLCEEGKVQEA 825
+ +PN +YN L LC EG+ +EA
Sbjct: 265 AKGFDPNVVSYNILLRNLCYEGQWKEA 291
Score = 94.0 bits (232), Expect = 1e-16
Identities = 49/179 (27%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
Frame = +1
Query: 292 VDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNI 471
+++A ++ ++ KG KP++ LL CK + +++ + + G P+ SY
Sbjct: 78 LNDAFFHMEYMVGKGQKPDVAQATQLLYDLCKANKMKKSIRVLEMMVNSGIIPDAASYTF 137
Query: 472 VLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSR 651
++ +C G A L+ +M + +TYN L+ L +HG + +L++L+++++
Sbjct: 138 LVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLIQRG 197
Query: 652 FKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNALAV-LCEEGKVQEA 825
PNA +Y+ ++ KE V+ +K LD +I + PN +YN L LC+EG+ EA
Sbjct: 198 LVPNAFTYSFLLEAAYKEKGVNEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTDEA 256
Score = 88.2 bits (217), Expect = 7e-15
Identities = 45/157 (28%), Positives = 85/157 (54%)
Frame = +1
Query: 64 LCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPN 243
LC++G V A ++ L P+ Y S++ LC GN + Q+L + + G P+
Sbjct: 386 LCEQGMVQEAFSIIQSLGSKQSSPSHDFYKSVISSLCRKGNTYPAFQLLYEMTKSGFNPD 445
Query: 244 VFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFR 423
+TYS L+ + + EA+ ++ + +P++ ++N L+ GFCK RTD +++ F
Sbjct: 446 SYTYSSLIRGLCLEGMLQEALEIVIVMEESNYRPDVDNFNALILGFCKSHRTDLSLKVFE 505
Query: 424 NLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEM 534
+ KG+ PN +Y I++ + +EG+ + A +L E+
Sbjct: 506 MIIEKGYMPNETTYTILVEGIAHEGKIELAAEVLKEL 542
Score = 86.7 bits (213), Expect = 2e-14
Identities = 43/134 (32%), Positives = 77/134 (57%)
Frame = +1
Query: 28 PDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQV 207
P Y +I+ LC++GN A QL+ ++ + G P++ TY+SL+RGLC+ G LQ +L++
Sbjct: 409 PSHDFYKSVISSLCRKGNTYPAFQLLYEMTKSGFNPDSYTYSSLIRGLCLEGMLQEALEI 468
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
+ + + P+V ++ L+ K D ++++ + II KG PN +Y +L+ G
Sbjct: 469 VIVMEESNYRPDVDNFNALILGFCKSHRTDLSLKVFEMIIEKGYMPNETTYTILVEGIAH 528
Query: 388 EGRTDEAVEFFRNL 429
EG+ + A E + L
Sbjct: 529 EGKIELAAEVLKEL 542
Score = 66.2 bits (160), Expect = 3e-08
Identities = 35/106 (33%), Positives = 59/106 (55%)
Frame = +1
Query: 7 MVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGN 186
M SG PDS +Y+ LI LC G + A+++V +EE P+ +N+L+ G C
Sbjct: 437 MTKSGFNPDSYTYSSLIRGLCLEGMLQEALEIVIVMEESNYRPDVDNFNALILGFCKSHR 496
Query: 187 LQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEI 324
SL+V + +++KG +PN TY+ L+E + ++ A +L E+
Sbjct: 497 TDLSLKVFEMIIEKGYMPNETTYTILVEGIAHEGKIELAAEVLKEL 542
Score = 62.0 bits (149), Expect = 5e-07
Identities = 34/135 (25%), Positives = 65/135 (48%)
Frame = +1
Query: 385 KEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVI 564
+E R ++A + KG P+V +L +C + ++ +L MV P
Sbjct: 74 RELRLNDAFFHMEYMVGKGQKPDVAQATQLLYDLCKANKMKKSIRVLEMMVNSGIIPDAA 133
Query: 565 TYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQM 744
+Y L++ L G A++++E+M + N +YN ++ C G ++ ++ LD++
Sbjct: 134 SYTFLVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKL 193
Query: 745 IYRHVNPNDGTYNAL 789
I R + PN TY+ L
Sbjct: 194 IQRGLVPNAFTYSFL 208
>ref|XP_009361764.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Pyrus x bretschneideri]
Length = 567
Score = 445 bits (1144), Expect = e-122
Identities = 213/275 (77%), Positives = 243/275 (88%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMMV SG IPD+ASYTFL+N LCKRGN+GYAMQLV+K+EE+G P NTVTYNSLVRGLC+
Sbjct: 121 EMMVLSGIIPDAASYTFLVNYLCKRGNIGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCVR 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ+LDRL+QKGLVPNV+TYSFLLEAAYK+RGV+EA+ LL EIIAKGGKPN+VSY
Sbjct: 181 GNLNQSLQLLDRLIQKGLVPNVYTYSFLLEAAYKERGVNEAMTLLQEIIAKGGKPNVVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRTDEA FR+LPS GFDPNVVSYNIVLRS+C+EGRW+EANVLLSEM G
Sbjct: 241 NVLLTGLCKEGRTDEAFRLFRSLPSMGFDPNVVSYNIVLRSLCHEGRWEEANVLLSEMEG 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
E R+PS++TYNILI SL+LHGRT+ AL+VL+EM R RFKP A SYNPIIA CKEGKVD
Sbjct: 301 EDRAPSIVTYNILIGSLSLHGRTEHALQVLDEMQRGRFKPTAASYNPIIAHLCKEGKVDG 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VKCLDQM++R NPN+GT+NA+AVLCEEG V A
Sbjct: 361 AVKCLDQMVHRRCNPNEGTFNAIAVLCEEGLVPGA 395
Score = 137 bits (345), Expect = 9e-30
Identities = 82/270 (30%), Positives = 137/270 (50%), Gaps = 1/270 (0%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY ++ LC G A L+ ++E P+ VTYN L+ L +HG +H+
Sbjct: 267 GFDPNVVSYNIVLRSLCHEGRWEEANVLLSEMEGEDRAPSIVTYNILIGSLSLHGRTEHA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
LQVLD + + P +Y+ ++ K+ VD AV+ LD+++ + PN ++N +
Sbjct: 327 LQVLDEMQRGRFKPTAASYNPIIAHLCKEGKVDGAVKCLDQMVHRRCNPNEGTFNAIAV- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
C+EG A ++L +K + Y V+ S+C +G A LL EM +P
Sbjct: 386 LCEEGLVPGAFSIIQSLCNKQKCSSYELYKNVITSLCRKGNTFPAFQLLYEMTKHGFTPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L L G D+A+E+ + M + +P+ ++N +I FCK + D + +
Sbjct: 446 SYTYSSLIRGLCLEGMLDEAMEIFKVMEENSLRPDTDNFNALILGFCKSRRTDLSFQVFE 505
Query: 739 QMIYRHVNPNDGTYNALAV-LCEEGKVQEA 825
MI + PN+ TY L + EG+++ A
Sbjct: 506 MMIEKGRMPNEMTYTILVEGIAHEGELELA 535
Score = 124 bits (312), Expect = 6e-26
Identities = 67/238 (28%), Positives = 124/238 (52%), Gaps = 6/238 (2%)
Frame = +1
Query: 94 MQLVDKLEEF------GCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTY 255
++L+D F G P+ L+ LC ++ +++V++ ++ G++P+ +Y
Sbjct: 76 LRLIDAFVHFESMVGKGQKPDVAQATQLLYDLCKVNKMRKAVRVIEMMVLSGIIPDAASY 135
Query: 256 SFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPS 435
+FL+ K + A++L++++ G N V+YN L+ G C G +++++ L
Sbjct: 136 TFLVNYLCKRGNIGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCVRGNLNQSLQLLDRLIQ 195
Query: 436 KGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDD 615
KG PNV +Y+ +L + E +EA LL E++ + P+V++YN+L++ L GRTD+
Sbjct: 196 KGLVPNVYTYSFLLEAAYKERGVNEAMTLLQEIIAKGGKPNVVSYNVLLTGLCKEGRTDE 255
Query: 616 ALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL 789
A + + F PN SYN ++ C EG+ + L +M P+ TYN L
Sbjct: 256 AFRLFRSLPSMGFDPNVVSYNIVLRSLCHEGRWEEANVLLSEMEGEDRAPSIVTYNIL 313
Score = 89.0 bits (219), Expect = 4e-15
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 34/203 (16%)
Frame = +1
Query: 28 PDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSL---------------- 159
P +ASY +I LCK G V A++ +D++ C PN T+N++
Sbjct: 340 PTAASYNPIIAHLCKEGKVDGAVKCLDQMVHRRCNPNEGTFNAIAVLCEEGLVPGAFSII 399
Query: 160 ------------------VRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKD 285
+ LC GN + Q+L + + G P+ +TYS L+ +
Sbjct: 400 QSLCNKQKCSSYELYKNVITSLCRKGNTFPAFQLLYEMTKHGFTPDSYTYSSLIRGLCLE 459
Query: 286 RGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSY 465
+DEA+ + + +P+ ++N L+ GFCK RTD + + F + KG PN ++Y
Sbjct: 460 GMLDEAMEIFKVMEENSLRPDTDNFNALILGFCKSRRTDLSFQVFEMMIEKGRMPNEMTY 519
Query: 466 NIVLRSMCYEGRWDEANVLLSEM 534
I++ + +EG + A +L E+
Sbjct: 520 TILVEGIAHEGELELAARVLKEL 542
Score = 83.2 bits (204), Expect = 2e-13
Identities = 45/146 (30%), Positives = 80/146 (54%)
Frame = +1
Query: 43 YTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLM 222
Y +I LC++GN A QL+ ++ + G P++ TY+SL+RGLC+ G L ++++ +
Sbjct: 414 YKNVITSLCRKGNTFPAFQLLYEMTKHGFTPDSYTYSSLIRGLCLEGMLDEAMEIFKVME 473
Query: 223 QKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTD 402
+ L P+ ++ L+ K R D + ++ + +I KG PN ++Y +L+ G EG +
Sbjct: 474 ENSLRPDTDNFNALILGFCKSRRTDLSFQVFEMMIEKGRMPNEMTYTILVEGIAHEGELE 533
Query: 403 EAVEFFRNLPSKGFDPNVVSYNIVLR 480
A + L + +VVS N V R
Sbjct: 534 LAARVLKELHLR----HVVSPNTVER 555
Score = 68.9 bits (167), Expect = 4e-09
Identities = 36/106 (33%), Positives = 58/106 (54%)
Frame = +1
Query: 7 MVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGN 186
M G PDS +Y+ LI LC G + AM++ +EE P+T +N+L+ G C
Sbjct: 437 MTKHGFTPDSYTYSSLIRGLCLEGMLDEAMEIFKVMEENSLRPDTDNFNALILGFCKSRR 496
Query: 187 LQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEI 324
S QV + +++KG +PN TY+ L+E + ++ A R+L E+
Sbjct: 497 TDLSFQVFEMMIEKGRMPNEMTYTILVEGIAHEGELELAARVLKEL 542
Score = 60.1 bits (144), Expect = 2e-06
Identities = 35/135 (25%), Positives = 66/135 (48%)
Frame = +1
Query: 385 KEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVI 564
KE R +A F ++ KG P+V +L +C + +A ++ MV P
Sbjct: 74 KELRLIDAFVHFESMVGKGQKPDVAQATQLLYDLCKVNKMRKAVRVIEMMVLSGIIPDAA 133
Query: 565 TYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQM 744
+Y L++ L G A++++E+M + N +YN ++ C G ++ ++ LD++
Sbjct: 134 SYTFLVNYLCKRGNIGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCVRGNLNQSLQLLDRL 193
Query: 745 IYRHVNPNDGTYNAL 789
I + + PN TY+ L
Sbjct: 194 IQKGLVPNVYTYSFL 208
>ref|XP_011460866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Fragaria vesca subsp. vesca]
Length = 566
Score = 443 bits (1140), Expect = e-122
Identities = 211/275 (76%), Positives = 248/275 (90%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMMV SG IPD+ASYTFL+N LCKRGN+GYAMQLV+K+EE+G P NT+TYNSLVRGLC+
Sbjct: 120 EMMVASGIIPDAASYTFLVNYLCKRGNIGYAMQLVEKMEEYGYPTNTITYNSLVRGLCVR 179
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ+LD+L+ KGLVPNV+TYSFL+EAAYK+RGV+EA++LL+EIIAKGGKPNLVSY
Sbjct: 180 GNLNKSLQLLDKLIHKGLVPNVYTYSFLIEAAYKERGVNEAMKLLEEIIAKGGKPNLVSY 239
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGR+DEA++FFR+LPS G PNVVSYNIVLRS+CYEGRW+EANVLL+EM G
Sbjct: 240 NVLLTGLCKEGRSDEAMKFFRSLPSMGLRPNVVSYNIVLRSLCYEGRWEEANVLLAEMDG 299
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
E R PSV TYNILI SL+LHGRT+ ALEVL+EM +SRFKP A SYNPIIA+ CKEGKVD
Sbjct: 300 EDRIPSVATYNILIGSLSLHGRTEHALEVLDEMAKSRFKPTAASYNPIIARLCKEGKVDH 359
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VVKCLDQMI++ N N+GT+NA+AVLCE+GKVQ+A
Sbjct: 360 VVKCLDQMIFQRCNRNEGTFNAIAVLCEQGKVQQA 394
Score = 124 bits (310), Expect = 1e-25
Identities = 78/297 (26%), Positives = 131/297 (44%), Gaps = 34/297 (11%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
E ++ G P+ SY L+ LCK G AM+ L G PN V+YN ++R LC
Sbjct: 225 EEIIAKGGKPNLVSYNVLLTGLCKEGRSDEAMKFFRSLPSMGLRPNVVSYNIVLRSLCYE 284
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
G + + +L + + +P+V TY+ L+ + + A+ +LDE+ KP SY
Sbjct: 285 GRWEEANVLLAEMDGEDRIPSVATYNILIGSLSLHGRTEHALEVLDEMAKSRFKPTAASY 344
Query: 361 NVLLTGFCKEGRTDEAVE----------------------------------FFRNLPSK 438
N ++ CKEG+ D V+ ++L +K
Sbjct: 345 NPIIARLCKEGKVDHVVKCLDQMIFQRCNRNEGTFNAIAVLCEQGKVQQAYSIIQSLGNK 404
Query: 439 GFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDA 618
Y V+ S+C +G A +L EM +P TY+ LI L L G ++A
Sbjct: 405 QKCSTTEFYRNVITSLCRKGNTYPALQILYEMTKYRFTPDSYTYSSLIRGLCLEGMLNEA 464
Query: 619 LEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL 789
+E+ + M + +P+ ++N ++ CK + D ++ + MI + PN+ TY L
Sbjct: 465 VEIFKVMEENNQRPDTENFNALLLGICKCRRTDLALQVFEMMIEKGRMPNEMTYTIL 521
Score = 119 bits (298), Expect = 3e-24
Identities = 61/233 (26%), Positives = 124/233 (53%)
Frame = +1
Query: 91 AMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLE 270
A Q ++ + G P+ L+ LC ++ +++V++ ++ G++P+ +Y+FL+
Sbjct: 80 AFQHLESMTGKGQKPDVGQATQLLYDLCKASKMRKAMRVMEMMVASGIIPDAASYTFLVN 139
Query: 271 AAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDP 450
K + A++L++++ G N ++YN L+ G C G +++++ L KG P
Sbjct: 140 YLCKRGNIGYAMQLVEKMEEYGYPTNTITYNSLVRGLCVRGNLNKSLQLLDKLIHKGLVP 199
Query: 451 NVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVL 630
NV +Y+ ++ + E +EA LL E++ + P++++YN+L++ L GR+D+A++
Sbjct: 200 NVYTYSFLIEAAYKERGVNEAMKLLEEIIAKGGKPNLVSYNVLLTGLCKEGRSDEAMKFF 259
Query: 631 EEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL 789
+ +PN SYN ++ C EG+ + L +M P+ TYN L
Sbjct: 260 RSLPSMGLRPNVVSYNIVLRSLCYEGRWEEANVLLAEMDGEDRIPSVATYNIL 312
Score = 94.4 bits (233), Expect = 9e-17
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 1/213 (0%)
Frame = +1
Query: 28 PDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQV 207
P +ASY +I +LCK G V + ++ +D++ C N T+N++ LC G +Q + +
Sbjct: 339 PTAASYNPIIARLCKEGKVDHVVKCLDQMIFQRCNRNEGTFNAIAV-LCEQGKVQQAYSI 397
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
+ L K Y ++ + + A+++L E+ P+ +Y+ L+ G C
Sbjct: 398 IQSLGNKQKCSTTEFYRNVITSLCRKGNTYPALQILYEMTKYRFTPDSYTYSSLIRGLCL 457
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
EG +EAVE F+ + P+ ++N +L +C R D A + M+ + R P+ +T
Sbjct: 458 EGMLNEAVEIFKVMEENNQRPDTENFNALLLGICKCRRTDLALQVFEMMIEKGRMPNEMT 517
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSR-FKPN 663
Y IL+ LA + A EVL E+ R PN
Sbjct: 518 YTILVEGLAHEKEMELATEVLRELQGRRVMSPN 550
Score = 85.1 bits (209), Expect = 6e-14
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 1/177 (0%)
Frame = +1
Query: 298 EAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVL 477
+A + L+ + KG KP++ LL CK + +A+ + + G P+ SY ++
Sbjct: 79 DAFQHLESMTGKGQKPDVGQATQLLYDLCKASKMRKAMRVMEMMVASGIIPDAASYTFLV 138
Query: 478 RSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFK 657
+C G A L+ +M + ITYN L+ L + G + +L++L++++
Sbjct: 139 NYLCKRGNIGYAMQLVEKMEEYGYPTNTITYNSLVRGLCVRGNLNKSLQLLDKLIHKGLV 198
Query: 658 PNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNALAV-LCEEGKVQEA 825
PN +Y+ +I KE V+ +K L+++I + PN +YN L LC+EG+ EA
Sbjct: 199 PNVYTYSFLIEAAYKERGVNEAMKLLEEIIAKGGKPNLVSYNVLLTGLCKEGRSDEA 255
Score = 80.9 bits (198), Expect = 1e-12
Identities = 42/140 (30%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Frame = +1
Query: 43 YTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLM 222
Y +I LC++GN A+Q++ ++ ++ P++ TY+SL+RGLC+ G L ++++ +
Sbjct: 413 YRNVITSLCRKGNTYPALQILYEMTKYRFTPDSYTYSSLIRGLCLEGMLNEAVEIFKVME 472
Query: 223 QKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTD 402
+ P+ ++ LL K R D A+++ + +I KG PN ++Y +L+ G E +
Sbjct: 473 ENNQRPDTENFNALLLGICKCRRTDLALQVFEMMIEKGRMPNEMTYTILVEGLAHEKEME 532
Query: 403 EAVEFFRNLPSKG-FDPNVV 459
A E R L + PN V
Sbjct: 533 LATEVLRELQGRRVMSPNTV 552
Score = 60.8 bits (146), Expect = 1e-06
Identities = 33/135 (24%), Positives = 67/135 (49%)
Frame = +1
Query: 385 KEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVI 564
+E R +A + ++ KG P+V +L +C + +A ++ MV P
Sbjct: 73 REVRLIDAFQHLESMTGKGQKPDVGQATQLLYDLCKASKMRKAMRVMEMMVASGIIPDAA 132
Query: 565 TYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQM 744
+Y L++ L G A++++E+M + N +YN ++ C G ++ ++ LD++
Sbjct: 133 SYTFLVNYLCKRGNIGYAMQLVEKMEEYGYPTNTITYNSLVRGLCVRGNLNKSLQLLDKL 192
Query: 745 IYRHVNPNDGTYNAL 789
I++ + PN TY+ L
Sbjct: 193 IHKGLVPNVYTYSFL 207
>ref|XP_008364411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g79080, chloroplastic-like, partial [Malus
domestica]
Length = 561
Score = 440 bits (1131), Expect = e-121
Identities = 212/275 (77%), Positives = 241/275 (87%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMMV SG IPD+ASYTFL+N LCKRGN+GYAMQLV+K+EE+G P NTVTYNSLVRGLC+
Sbjct: 121 EMMVVSGIIPDAASYTFLVNYLCKRGNIGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCVR 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ+LDRL+QKGLVPNV+TYSFLLEAAYK+RGV+EA++LL EIIAKGGKPN+VSY
Sbjct: 181 GNLNQSLQLLDRLIQKGLVPNVYTYSFLLEAAYKERGVNEAMKLLQEIIAKGGKPNVVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRTDEA FR+LPS GFDPNVVSYNIVLRS+C+EGR NVLLSEM G
Sbjct: 241 NVLLTGLCKEGRTDEAFRLFRSLPSMGFDPNVVSYNIVLRSLCHEGRGKRXNVLLSEMEG 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
E R+PS++TYNILI SLALHGRT+ AL+VL+EM R RFKP A SYNPIIA CKEGKVD
Sbjct: 301 EDRAPSIVTYNILIGSLALHGRTEHALQVLDEMQRGRFKPTAASYNPIIAHLCKEGKVDG 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VKCLDQM++R NPN+GT+NA+AVLCEEG V EA
Sbjct: 361 AVKCLDQMVHRRCNPNEGTFNAIAVLCEEGLVPEA 395
Score = 129 bits (324), Expect = 3e-27
Identities = 80/270 (29%), Positives = 133/270 (49%), Gaps = 1/270 (0%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY ++ LC G L+ ++E P+ VTYN L+ L +HG +H+
Sbjct: 267 GFDPNVVSYNIVLRSLCHEGRGKRXNVLLSEMEGEDRAPSIVTYNILIGSLALHGRTEHA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
LQVLD + + P +Y+ ++ K+ VD AV+ LD+++ + PN ++N +
Sbjct: 327 LQVLDEMQRGRFKPTAASYNPIIAHLCKEGKVDGAVKCLDQMVHRRCNPNEGTFNAIAV- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
C+EG EA ++L +K + Y V+ S+C +G A +L EM +P
Sbjct: 386 LCEEGLVPEAFSIIQSLCNKQKCSSYELYKNVITSLCRKGNTFPAFQILYEMTKHGFTPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L L G D+A+E+ + M + P+ ++N I FCK + D + L
Sbjct: 446 SYTYSSLIRGLCLEGMLDEAMEIFKVMEZNSLXPDTDNFNAXILGFCKSRRTDLSFQVLR 505
Query: 739 QMIYRHVNPNDGTYNALAV-LCEEGKVQEA 825
+ V N+ TY L + EG+++ A
Sbjct: 506 XXSRKSVCLNEMTYTILVEGIAHEGELELA 535
Score = 122 bits (305), Expect = 4e-25
Identities = 70/267 (26%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Frame = +1
Query: 133 PNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRL 312
P+ L+ LC ++ +++V++ ++ G++P+ +Y+FL+ K + A++L
Sbjct: 95 PDVAQATQLLYDLCKANKMRKAVRVIEMMVVSGIIPDAASYTFLVNYLCKRGNIGYAMQL 154
Query: 313 LDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCY 492
++++ G N V+YN L+ G C G +++++ L KG PNV +Y+ +L +
Sbjct: 155 VEKMEEYGYPTNTVTYNSLVRGLCVRGNLNQSLQLLDRLIQKGLVPNVYTYSFLLEAAYK 214
Query: 493 EGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATS 672
E +EA LL E++ + P+V++YN+L++ L GRTD+A + + F PN S
Sbjct: 215 ERGVNEAMKLLQEIIAKGGKPNVVSYNVLLTGLCKEGRTDEAFRLFRSLPSMGFDPNVVS 274
Query: 673 YNPIIAQFCKE-----------------------------------GKVDFVVKCLDQMI 747
YN ++ C E G+ + ++ LD+M
Sbjct: 275 YNIVLRSLCHEGRGKRXNVLLSEMEGEDRAPSIVTYNILIGSLALHGRTEHALQVLDEMQ 334
Query: 748 YRHVNPNDGTYN-ALAVLCEEGKVQEA 825
P +YN +A LC+EGKV A
Sbjct: 335 RGRFKPTAASYNPIIAHLCKEGKVDGA 361
Score = 104 bits (260), Expect = 7e-20
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 1/203 (0%)
Frame = +1
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
L+ ++ K P+V + LL K + +AVR+++ ++ G P+ SY L+ CK
Sbjct: 85 LESMVGKDQKPDVAQATQLLYDLCKANKMRKAVRVIEMMVVSGIIPDAASYTFLVNYLCK 144
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
G A++ + G+ N V+YN ++R +C G +++ LL ++ + P+V T
Sbjct: 145 RGNIGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCVRGNLNQSLQLLDRLIQKGLVPNVYT 204
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMI 747
Y+ L+ + ++A+++L+E++ KPN SYN ++ CKEG+ D + +
Sbjct: 205 YSFLLEAAYKERGVNEAMKLLQEIIAKGGKPNVVSYNVLLTGLCKEGRTDEAFRLFRSLP 264
Query: 748 YRHVNPNDGTYN-ALAVLCEEGK 813
+PN +YN L LC EG+
Sbjct: 265 SMGFDPNVVSYNIVLRSLCHEGR 287
Score = 80.9 bits (198), Expect = 1e-12
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Frame = +1
Query: 28 PDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSL---------------- 159
P +ASY +I LCK G V A++ +D++ C PN T+N++
Sbjct: 340 PTAASYNPIIAHLCKEGKVDGAVKCLDQMVHRRCNPNEGTFNAIAVLCEEGLVPEAFSII 399
Query: 160 ------------------VRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKD 285
+ LC GN + Q+L + + G P+ +TYS L+ +
Sbjct: 400 QSLCNKQKCSSYELYKNVITSLCRKGNTFPAFQILYEMTKHGFTPDSYTYSSLIRGLCLE 459
Query: 286 RGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSY 465
+DEA+ + + P+ ++N + GFCK RTD + + R K N ++Y
Sbjct: 460 GMLDEAMEIFKVMEZNSLXPDTDNFNAXILGFCKSRRTDLSFQVLRXXSRKSVCLNEMTY 519
Query: 466 NIVLRSMCYEGRWDEANVLLSEM-VGETRSPSVI 564
I++ + +EG + A +L E+ + + SP+ +
Sbjct: 520 TILVEGIAHEGELELAARVLKELHLRQVVSPNTV 553
Score = 71.6 bits (174), Expect = 6e-10
Identities = 41/146 (28%), Positives = 74/146 (50%)
Frame = +1
Query: 43 YTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLM 222
Y +I LC++GN A Q++ ++ + G P++ TY+SL+RGLC+ G L ++++ +
Sbjct: 414 YKNVITSLCRKGNTFPAFQILYEMTKHGFTPDSYTYSSLIRGLCLEGMLDEAMEIFKVME 473
Query: 223 QKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTD 402
+ L P+ ++ + K R D + ++L K N ++Y +L+ G EG +
Sbjct: 474 ZNSLXPDTDNFNAXILGFCKSRRTDLSFQVLRXXSRKSVCLNEMTYTILVEGIAHEGELE 533
Query: 403 EAVEFFRNLPSKGFDPNVVSYNIVLR 480
A + L + VVS N V R
Sbjct: 534 LAARVLKELHLR----QVVSPNTVER 555
Score = 59.3 bits (142), Expect = 3e-06
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +1
Query: 7 MVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGN 186
M G PDS +Y+ LI LC G + AM++ +E+ P+T +N+ + G C
Sbjct: 437 MTKHGFTPDSYTYSSLIRGLCLEGMLDEAMEIFKVMEZNSLXPDTDNFNAXILGFCKSRR 496
Query: 187 LQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEI-IAKGGKPNLVSYN 363
S QVL +K + N TY+ L+E + ++ A R+L E+ + + PN V
Sbjct: 497 TDLSFQVLRXXSRKSVCLNEMTYTILVEGIAHEGELELAARVLKELHLRQVVSPNTVERL 556
Query: 364 VL 369
V+
Sbjct: 557 VM 558
>ref|XP_009397366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Musa acuminata subsp. malaccensis]
Length = 566
Score = 436 bits (1121), Expect = e-119
Identities = 206/275 (74%), Positives = 242/275 (88%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
E+M SGT P+ ++YTFL+NQLCKRGNVGYAMQLVDK+EE GCPP T+ YNSLVRGLCIH
Sbjct: 125 ELMASSGTTPEPSTYTFLVNQLCKRGNVGYAMQLVDKMEEHGCPPTTIVYNSLVRGLCIH 184
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNLQ SLQ+L+RLM KGL+PNVFTYSFLLEAAYK+RG DEAVRLLDEIIAKGG+PNLVSY
Sbjct: 185 GNLQQSLQLLERLMHKGLIPNVFTYSFLLEAAYKERGADEAVRLLDEIIAKGGRPNLVSY 244
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTGFCKEGR ++A++FFR LPSKGF PNVVSYNI+LRS+CY+GRW+EA LL+EM
Sbjct: 245 NVLLTGFCKEGRLEDAMQFFRGLPSKGFRPNVVSYNILLRSLCYQGRWEEAEELLAEMGE 304
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
PS+ITYNILI SLA HGRT+ A+++LEEM R+ FKP A SYNPIIA+FCKEGK+D
Sbjct: 305 RNCDPSIITYNILIGSLAYHGRTEQAVDILEEMARNGFKPVAASYNPIIARFCKEGKLDM 364
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
V++CLD M++RH PN+GTYNA+AVLCEEGKV +A
Sbjct: 365 VLECLD-MMHRHCTPNEGTYNAIAVLCEEGKVDDA 398
Score = 128 bits (321), Expect = 6e-27
Identities = 85/296 (28%), Positives = 135/296 (45%), Gaps = 35/296 (11%)
Frame = +1
Query: 7 MVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGN 186
++ G P+ SY L+ CK G + AMQ L G PN V+YN L+R LC G
Sbjct: 232 IIAKGGRPNLVSYNVLLTGFCKEGRLEDAMQFFRGLPSKGFRPNVVSYNILLRSLCYQGR 291
Query: 187 LQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNV 366
+ + ++L + ++ P++ TY+ L+ + ++AV +L+E+ G KP SYN
Sbjct: 292 WEEAEELLAEMGERNCDPSIITYNILIGSLAYHGRTEQAVDILEEMARNGFKPVAASYNP 351
Query: 367 LLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEA----------- 513
++ FCKEG+ D +E ++ + PN +YN + +C EG+ D+A
Sbjct: 352 IIARFCKEGKLDMVLECL-DMMHRHCTPNEGTYNAIA-VLCEEGKVDDAFSILQSLGNKQ 409
Query: 514 ---------NV---------------LLSEMVGETRSPSVITYNILISSLALHGRTDDAL 621
NV LL E +P T + LI L + G D+A+
Sbjct: 410 NASMNDFYRNVISFLCKKGNTFAAFQLLHETTKHGFTPDSYTNSSLIRGLCIEGMLDEAI 469
Query: 622 EVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL 789
E+ E M + KP+ +YN +I CK + D + MI + PN+ TY L
Sbjct: 470 ELFEVMEENGNKPDIDNYNSLILGLCKAQRTDLSFDIYESMIEKGYVPNETTYTIL 525
Score = 126 bits (317), Expect = 2e-26
Identities = 68/235 (28%), Positives = 122/235 (51%), Gaps = 1/235 (0%)
Frame = +1
Query: 124 GCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEA 303
G P+ LV LC ++ +++V++ + G P TY+FL+ K V A
Sbjct: 96 GHRPDAAQATQLVYDLCKSNKIRKAIRVMELMASSGTTPEPSTYTFLVNQLCKRGNVGYA 155
Query: 304 VRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRS 483
++L+D++ G P + YN L+ G C G ++++ L KG PNV +Y+ +L +
Sbjct: 156 MQLVDKMEEHGCPPTTIVYNSLVRGLCIHGNLQQSLQLLERLMHKGLIPNVFTYSFLLEA 215
Query: 484 MCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPN 663
E DEA LL E++ + P++++YN+L++ GR +DA++ + F+PN
Sbjct: 216 AYKERGADEAVRLLDEIIAKGGRPNLVSYNVLLTGFCKEGRLEDAMQFFRGLPSKGFRPN 275
Query: 664 ATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL-AVLCEEGKVQEA 825
SYN ++ C +G+ + + L +M R+ +P+ TYN L L G+ ++A
Sbjct: 276 VVSYNILLRSLCYQGRWEEAEELLAEMGERNCDPSIITYNILIGSLAYHGRTEQA 330
Score = 101 bits (251), Expect = 7e-19
Identities = 57/225 (25%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Frame = +1
Query: 154 SLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAK 333
S ++ + +H H L+ ++ KG P+ + L+ K + +A+R+++ + +
Sbjct: 75 SRIKEVRLHDAFLH----LEHMVGKGHRPDAAQATQLVYDLCKSNKIRKAIRVMELMASS 130
Query: 334 GGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEA 513
G P +Y L+ CK G A++ + G P + YN ++R +C G ++
Sbjct: 131 GTTPEPSTYTFLVNQLCKRGNVGYAMQLVDKMEEHGCPPTTIVYNSLVRGLCIHGNLQQS 190
Query: 514 NVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQ 693
LL ++ + P+V TY+ L+ + D+A+ +L+E++ +PN SYN ++
Sbjct: 191 LQLLERLMHKGLIPNVFTYSFLLEAAYKERGADEAVRLLDEIIAKGGRPNLVSYNVLLTG 250
Query: 694 FCKEGKVDFVVKCLDQMIYRHVNPNDGTYN-ALAVLCEEGKVQEA 825
FCKEG+++ ++ + + PN +YN L LC +G+ +EA
Sbjct: 251 FCKEGRLEDAMQFFRGLPSKGFRPNVVSYNILLRSLCYQGRWEEA 295
Score = 93.2 bits (230), Expect = 2e-16
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Frame = +1
Query: 268 EAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFD 447
E+ K+ + +A L+ ++ KG +P+ L+ CK + +A+ + S G
Sbjct: 74 ESRIKEVRLHDAFLHLEHMVGKGHRPDAAQATQLVYDLCKSNKIRKAIRVMELMASSGTT 133
Query: 448 PNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEV 627
P +Y ++ +C G A L+ +M P+ I YN L+ L +HG +L++
Sbjct: 134 PEPSTYTFLVNQLCKRGNVGYAMQLVDKMEEHGCPPTTIVYNSLVRGLCIHGNLQQSLQL 193
Query: 628 LEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNALAV-LCE 804
LE +M PN +Y+ ++ KE D V+ LD++I + PN +YN L C+
Sbjct: 194 LERLMHKGLIPNVFTYSFLLEAAYKERGADEAVRLLDEIIAKGGRPNLVSYNVLLTGFCK 253
Query: 805 EGKVQEA 825
EG++++A
Sbjct: 254 EGRLEDA 260
Score = 90.5 bits (223), Expect = 1e-15
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 34/212 (16%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSL------- 159
E M +G P +ASY +I + CK G + ++ +D + C PN TYN++
Sbjct: 335 EEMARNGFKPVAASYNPIIARFCKEGKLDMVLECLDMMHRH-CTPNEGTYNAIAVLCEEG 393
Query: 160 ---------------------------VRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYS 258
+ LC GN + Q+L + G P+ +T S
Sbjct: 394 KVDDAFSILQSLGNKQNASMNDFYRNVISFLCKKGNTFAAFQLLHETTKHGFTPDSYTNS 453
Query: 259 FLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSK 438
L+ + +DEA+ L + + G KP++ +YN L+ G CK RTD + + + ++ K
Sbjct: 454 SLIRGLCIEGMLDEAIELFEVMEENGNKPDIDNYNSLILGLCKAQRTDLSFDIYESMIEK 513
Query: 439 GFDPNVVSYNIVLRSMCYEGRWDEANVLLSEM 534
G+ PN +Y I++ + +E D A +L E+
Sbjct: 514 GYVPNETTYTILVEGLAHEDEADLAAEVLKEL 545
Score = 82.8 bits (203), Expect = 3e-13
Identities = 46/146 (31%), Positives = 79/146 (54%)
Frame = +1
Query: 43 YTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLM 222
Y +I+ LCK+GN A QL+ + + G P++ T +SL+RGLCI G L ++++ + +
Sbjct: 417 YRNVISFLCKKGNTFAAFQLLHETTKHGFTPDSYTNSSLIRGLCIEGMLDEAIELFEVME 476
Query: 223 QKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTD 402
+ G P++ Y+ L+ K + D + + + +I KG PN +Y +L+ G E D
Sbjct: 477 ENGNKPDIDNYNSLILGLCKAQRTDLSFDIYESMIEKGYVPNETTYTILVEGLAHEDEAD 536
Query: 403 EAVEFFRNLPSKGFDPNVVSYNIVLR 480
A E + L + N+VS N + R
Sbjct: 537 LAAEVLKEL----YYRNIVSQNTMER 558
>emb|CDP13612.1| unnamed protein product [Coffea canephora]
Length = 568
Score = 434 bits (1116), Expect = e-119
Identities = 206/276 (74%), Positives = 244/276 (88%), Gaps = 1/276 (0%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EM++ SG+IPD+ASYTFL+N LCKRGNVG+AMQLV+K+EE G P NTVTYNSLVRGLC+
Sbjct: 121 EMLIASGSIPDAASYTFLVNHLCKRGNVGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMR 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL +LQ +DRLMQKGLVPN FTYS LLEAAYK+RGV+EA+RLLDEIIAKGG PNLVSY
Sbjct: 181 GNLDQNLQFVDRLMQKGLVPNAFTYSILLEAAYKERGVNEAMRLLDEIIAKGGTPNLVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NV+LTG CKEGR DEA++ FRNLPSKGF+PNVVSYNI+LR++CYEGRW EAN LL+EMVG
Sbjct: 241 NVILTGLCKEGRVDEAIQLFRNLPSKGFNPNVVSYNILLRTLCYEGRWAEANELLAEMVG 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMR-SRFKPNATSYNPIIAQFCKEGKVD 717
+ RSP+++TYNILI SLA HGRTD AL+V++EM R + KP A SYNPIIA+ CKE K+D
Sbjct: 301 DDRSPTIVTYNILIGSLAFHGRTDHALKVVDEMHRGGQLKPTAASYNPIIARLCKERKLD 360
Query: 718 FVVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
V+KCLD+M+YRH NPN+GTYNA+A+LCEEG VQEA
Sbjct: 361 AVIKCLDEMMYRHCNPNEGTYNAIALLCEEGMVQEA 396
Score = 125 bits (315), Expect = 3e-26
Identities = 79/269 (29%), Positives = 131/269 (48%), Gaps = 1/269 (0%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY L+ LC G A +L+ ++ P VTYN L+ L HG H+
Sbjct: 267 GFNPNVVSYNILLRTLCYEGRWAEANELLAEMVGDDRSPTIVTYNILIGSLAFHGRTDHA 326
Query: 199 LQVLDRLMQKG-LVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLT 375
L+V+D + + G L P +Y+ ++ K+R +D ++ LDE++ + PN +YN +
Sbjct: 327 LKVVDEMHRGGQLKPTAASYNPIIARLCKERKLDAVIKCLDEMMYRHCNPNEGTYNAIAL 386
Query: 376 GFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSP 555
C+EG EA ++L K N Y V+ S+C +G A LL EM +P
Sbjct: 387 -LCEEGMVQEAFSTIQSLRPKQSSSNYDFYRTVISSLCKKGNTYAAFKLLYEMTTCGFNP 445
Query: 556 SVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCL 735
TY+ LI L + A++V M S ++P+ ++N ++ CK + D ++
Sbjct: 446 DSYTYSSLIRGLCMERMLGVAIDVFRIMELSGYRPDTDNFNALVLGLCKSRRTDLSLEVF 505
Query: 736 DQMIYRHVNPNDGTYNALAVLCEEGKVQE 822
+ MI + P++ TY L EG ++E
Sbjct: 506 EMMIEKGYMPSETTYTILV----EGIIRE 530
Score = 113 bits (282), Expect = 2e-22
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 1/207 (0%)
Frame = +1
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
L+ ++ K +P+V + LL K + +A R+++ +IA G P+ SY L+ CK
Sbjct: 85 LEYMVGKRHMPDVVQATQLLYDLCKSNKLRKATRVMEMLIASGSIPDAASYTFLVNHLCK 144
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
G A++ + G+ N V+YN ++R +C G D+ + ++ + P+ T
Sbjct: 145 RGNVGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMRGNLDQNLQFVDRLMQKGLVPNAFT 204
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMI 747
Y+IL+ + ++A+ +L+E++ PN SYN I+ CKEG+VD ++ +
Sbjct: 205 YSILLEAAYKERGVNEAMRLLDEIIAKGGTPNLVSYNVILTGLCKEGRVDEAIQLFRNLP 264
Query: 748 YRHVNPNDGTYN-ALAVLCEEGKVQEA 825
+ NPN +YN L LC EG+ EA
Sbjct: 265 SKGFNPNVVSYNILLRTLCYEGRWAEA 291
Score = 90.1 bits (222), Expect = 2e-15
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 1/183 (0%)
Frame = +1
Query: 280 KDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVV 459
K+ +++A L+ ++ K P++V LL CK + +A L + G P+
Sbjct: 74 KELRMNDAFLYLEYMVGKRHMPDVVQATQLLYDLCKSNKLRKATRVMEMLIASGSIPDAA 133
Query: 460 SYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEM 639
SY ++ +C G A L+ +M + +TYN L+ L + G D L+ ++ +
Sbjct: 134 SYTFLVNHLCKRGNVGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMRGNLDQNLQFVDRL 193
Query: 640 MRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNA-LAVLCEEGKV 816
M+ PNA +Y+ ++ KE V+ ++ LD++I + PN +YN L LC+EG+V
Sbjct: 194 MQKGLVPNAFTYSILLEAAYKERGVNEAMRLLDEIIAKGGTPNLVSYNVILTGLCKEGRV 253
Query: 817 QEA 825
EA
Sbjct: 254 DEA 256
Score = 75.5 bits (184), Expect = 4e-11
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 34/203 (16%)
Frame = +1
Query: 28 PDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSL---------------- 159
P +ASY +I +LCK + ++ +D++ C PN TYN++
Sbjct: 341 PTAASYNPIIARLCKERKLDAVIKCLDEMMYRHCNPNEGTYNAIALLCEEGMVQEAFSTI 400
Query: 160 ------------------VRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKD 285
+ LC GN + ++L + G P+ +TYS L+ +
Sbjct: 401 QSLRPKQSSSNYDFYRTVISSLCKKGNTYAAFKLLYEMTTCGFNPDSYTYSSLIRGLCME 460
Query: 286 RGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSY 465
R + A+ + + G +P+ ++N L+ G CK RTD ++E F + KG+ P+ +Y
Sbjct: 461 RMLGVAIDVFRIMELSGYRPDTDNFNALVLGLCKSRRTDLSLEVFEMMIEKGYMPSETTY 520
Query: 466 NIVLRSMCYEGRWDEANVLLSEM 534
I++ + E + A +L E+
Sbjct: 521 TILVEGIIREEERELAAAVLKEL 543
Score = 64.7 bits (156), Expect = 8e-08
Identities = 37/108 (34%), Positives = 60/108 (55%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EM C G PDS +Y+ LI LC +G A+ + +E G P+T +N+LV GLC
Sbjct: 437 EMTTC-GFNPDSYTYSSLIRGLCMERMLGVAIDVFRIMELSGYRPDTDNFNALVLGLCKS 495
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEI 324
SL+V + +++KG +P+ TY+ L+E ++ + A +L E+
Sbjct: 496 RRTDLSLEVFEMMIEKGYMPSETTYTILVEGIIREEERELAAAVLKEL 543
>ref|XP_006441032.1| hypothetical protein CICLE_v10019503mg [Citrus clementina]
gi|557543294|gb|ESR54272.1| hypothetical protein
CICLE_v10019503mg [Citrus clementina]
Length = 568
Score = 434 bits (1115), Expect = e-119
Identities = 206/275 (74%), Positives = 243/275 (88%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMMV SG IPD++SYT+L+N LCK+GNVGYAMQLV+K+E++G P NTVTYNSLVRGLC+
Sbjct: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ LDRL+QKGLVPN FTYSFLLEAAYK+RGV EA++LLD+IIAKGGKPNLVSY
Sbjct: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHEAMKLLDDIIAKGGKPNLVSY 241
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRT+EA+ FFR+LPSKGF+PNVVSYNI+LRS+C EGRW+EAN LL+EM G
Sbjct: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
RSP+++TYNILI SLA HG+TD AL+VL+EM++ RF+P+A SYNPIIA+ C EGKVD
Sbjct: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VVKCLDQM +R PN+GTYN LA+LCE GKVQEA
Sbjct: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCEVGKVQEA 396
Score = 130 bits (327), Expect = 1e-27
Identities = 77/257 (29%), Positives = 128/257 (49%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY L+ LC G A +L+ +++ P VTYN L+ L HG H+
Sbjct: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
L+VLD +++ P+ +Y+ ++ + VD V+ LD++ + KPN +YN L
Sbjct: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
C+ G+ EA ++L +K Y V+ S+C +G+ +A LL EM +P
Sbjct: 387 LCEVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTTYGFTPD 446
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L + G ++ALE+ M +KP+ ++N ++ CK + D ++
Sbjct: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
Query: 739 QMIYRHVNPNDGTYNAL 789
MI + PN+ TY L
Sbjct: 507 MMIEKGQMPNETTYTIL 523
Score = 96.3 bits (238), Expect = 2e-17
Identities = 53/187 (28%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Frame = +1
Query: 268 EAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFD 447
+ ++D +++A L+ +++KG KP++V LL CK + +A++ + S G
Sbjct: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
Query: 448 PNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEV 627
P+ SY ++ +C +G A L+ +M + +TYN L+ L + G + +L+
Sbjct: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
Query: 628 LEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNALAV-LCE 804
L+ +++ PNA +Y+ ++ KE V +K LD +I + PN +YN L LC+
Sbjct: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHEAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
Query: 805 EGKVQEA 825
EG+ +EA
Sbjct: 251 EGRTEEA 257
Score = 78.6 bits (192), Expect = 5e-12
Identities = 37/129 (28%), Positives = 71/129 (55%)
Frame = +1
Query: 43 YTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLM 222
Y ++I LC++G A QL+ ++ +G P++ TY+SL+RGLC+ G ++ +L++ +
Sbjct: 415 YKYVITSLCRKGKTYQAFQLLYEMTTYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
Query: 223 QKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTD 402
+ P+V ++ LL K R D ++ + +I KG PN +Y +L+ G + +
Sbjct: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
Query: 403 EAVEFFRNL 429
+ E + L
Sbjct: 535 LSAEVLKEL 543
Score = 63.5 bits (153), Expect = 2e-07
Identities = 33/106 (31%), Positives = 57/106 (53%)
Frame = +1
Query: 7 MVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGN 186
M G PDS +Y+ LI LC G + A+++ +EE+ P+ +N+L+ GLC
Sbjct: 438 MTTYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
Query: 187 LQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEI 324
SL+V +++KG +PN TY+ L+E ++ + +L E+
Sbjct: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
>ref|XP_011030727.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Populus euphratica]
Length = 567
Score = 433 bits (1114), Expect = e-119
Identities = 204/275 (74%), Positives = 244/275 (88%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMM+ SG IPD+ASYTFL+N LCKRGN+GYAMQLV+K+EE G P NTVTYNSLVRGLC+H
Sbjct: 121 EMMIESGIIPDAASYTFLVNNLCKRGNIGYAMQLVEKMEENGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ+LD+LM KGLVPN FTYSFLLEAAYK+RGV+EA++LLDEIIAKG +PNLVSY
Sbjct: 181 GNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRT+EA++FFR+LPSKGF+PNVVSYNI+LRS+CYEGRW+EAN LL+EM
Sbjct: 241 NVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSYNIILRSLCYEGRWEEANQLLAEMDS 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
E RSPS++TYNILI SLA HGR + A EVL+EM+R+ FKP+A +YNPIIA CKEGK+D
Sbjct: 301 EERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSAATYNPIIAHLCKEGKLDL 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
V+ CLDQMI+ NPN+GT+NA+AVLC++G+V EA
Sbjct: 361 VINCLDQMIHHRCNPNEGTFNAIAVLCKQGRVPEA 395
Score = 139 bits (350), Expect = 2e-30
Identities = 77/257 (29%), Positives = 129/257 (50%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY ++ LC G A QL+ +++ P+ VTYN L+ L HG ++H+
Sbjct: 267 GFNPNVVSYNIILRSLCYEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
+VLD +++ P+ TY+ ++ K+ +D + LD++I PN ++N +
Sbjct: 327 FEVLDEMVRASFKPSAATYNPIIAHLCKEGKLDLVINCLDQMIHHRCNPNEGTFNAIAV- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
CK+GR EA +NL +K Y V+ S+C +G A LL EM P
Sbjct: 386 LCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L + G D+ALE+ + + ++P ++N +I FCK G+ D + +
Sbjct: 446 PYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDIFE 505
Query: 739 QMIYRHVNPNDGTYNAL 789
M+ + PN+ TY +
Sbjct: 506 MMVEKGYTPNETTYTII 522
Score = 125 bits (314), Expect = 4e-26
Identities = 65/235 (27%), Positives = 127/235 (54%), Gaps = 1/235 (0%)
Frame = +1
Query: 124 GCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEA 303
G P+ L+ LC ++ + +V++ +++ G++P+ +Y+FL+ K + A
Sbjct: 92 GHKPDVAQATQLLYDLCKSNKMKKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGYA 151
Query: 304 VRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRS 483
++L++++ G N V+YN L+ G C G +++++ L KG PN +Y+ +L +
Sbjct: 152 MQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEA 211
Query: 484 MCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPN 663
E +EA LL E++ + P++++YN+L++ L GRT++A++ ++ F PN
Sbjct: 212 AYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPN 271
Query: 664 ATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL-AVLCEEGKVQEA 825
SYN I+ C EG+ + + L +M +P+ TYN L L G+++ A
Sbjct: 272 VVSYNIILRSLCYEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHA 326
Score = 109 bits (272), Expect = 3e-21
Identities = 58/207 (28%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Frame = +1
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
L+ ++ KG P+V + LL K + +A R+++ +I G P+ SY L+ CK
Sbjct: 85 LEFIVGKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMMIESGIIPDAASYTFLVNNLCK 144
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
G A++ + G+ N V+YN ++R +C G +++ LL +++ + P+ T
Sbjct: 145 RGNIGYAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFT 204
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMI 747
Y+ L+ + ++A+++L+E++ ++PN SYN ++ CKEG+ + ++ +
Sbjct: 205 YSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIQFFRDLP 264
Query: 748 YRHVNPNDGTYN-ALAVLCEEGKVQEA 825
+ NPN +YN L LC EG+ +EA
Sbjct: 265 SKGFNPNVVSYNIILRSLCYEGRWEEA 291
Score = 94.4 bits (233), Expect = 9e-17
Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 292 VDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNI 471
+++A L+ I+ KG KP++ LL CK + +A + G P+ SY
Sbjct: 78 LNDAFFHLEFIVGKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMMIESGIIPDAASYTF 137
Query: 472 VLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSR 651
++ ++C G A L+ +M + +TYN L+ L +HG + +L++L+++M
Sbjct: 138 LVNNLCKRGNIGYAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKG 197
Query: 652 FKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNALAV-LCEEGKVQEA 825
PN +Y+ ++ KE V+ +K LD++I + PN +YN L LC+EG+ +EA
Sbjct: 198 LVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEA 256
Score = 94.0 bits (232), Expect = 1e-16
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 40/230 (17%)
Frame = +1
Query: 7 MVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSL--------- 159
MV + P +A+Y +I LCK G + + +D++ C PN T+N++
Sbjct: 333 MVRASFKPSAATYNPIIAHLCKEGKLDLVINCLDQMIHHRCNPNEGTFNAIAVLCKQGRV 392
Query: 160 -------------------------VRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFL 264
+ LC GN + Q+L + + G VP+ +TYS L
Sbjct: 393 PEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSL 452
Query: 265 LEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGF 444
+ + +DEA+ + + +P L ++N L+ GFCK GRTD +++ F + KG+
Sbjct: 453 IRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDIFEMMVEKGY 512
Query: 445 DPNVVSYNIVLRSMCYEGRWDEANVLLSEMV------GETRSPSVITYNI 576
PN +Y I++ + +E + A +L E++ T V+ YN+
Sbjct: 513 TPNETTYTIIVEGIAHEEEKELAAEVLEELLLRQVMRRNTAERLVLQYNL 562
Score = 64.3 bits (155), Expect = 1e-07
Identities = 31/135 (22%), Positives = 69/135 (51%)
Frame = +1
Query: 385 KEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVI 564
+E R ++A + KG P+V +L +C + +A ++ M+ P
Sbjct: 74 REIRLNDAFFHLEFIVGKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMMIESGIIPDAA 133
Query: 565 TYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQM 744
+Y L+++L G A++++E+M + + N +YN ++ C G ++ ++ LD++
Sbjct: 134 SYTFLVNNLCKRGNIGYAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKL 193
Query: 745 IYRHVNPNDGTYNAL 789
+++ + PN+ TY+ L
Sbjct: 194 MWKGLVPNEFTYSFL 208
>ref|XP_012087429.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Jatropha curcas]
gi|643711622|gb|KDP25129.1| hypothetical protein
JCGZ_22664 [Jatropha curcas]
Length = 567
Score = 433 bits (1114), Expect = e-119
Identities = 199/275 (72%), Positives = 247/275 (89%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
E+M+ SG IPD+++YTFL+N LCKRGN+G+AMQLV+K+EE+G PPNTVTYNSLVRG C++
Sbjct: 121 EIMIGSGIIPDASAYTFLVNYLCKRGNIGHAMQLVEKMEEYGYPPNTVTYNSLVRGFCLN 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ LD+LMQKGLVPN FTYS LLEA YK+RGV+EA+RLLDEIIAKGG+PNLVSY
Sbjct: 181 GNLNKSLQFLDKLMQKGLVPNAFTYSSLLEATYKERGVNEAMRLLDEIIAKGGQPNLVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGR +EA++ FR+LPSKGF+PNVVS NI+LRS+CYEGRW+EAN L+SEM G
Sbjct: 241 NVLLTGLCKEGRIEEAIQLFRSLPSKGFNPNVVSCNILLRSLCYEGRWEEANDLMSEMDG 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
E RSP+++TYNIL+ SLA HGRT+ AL++++EMM+ FKP AT+YNPIIA+ C+EGKVD
Sbjct: 301 EERSPTIVTYNILVGSLAFHGRTEQALQIIDEMMKGPFKPTATAYNPIIARLCREGKVDL 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VVKCLDQMI+ +NPN+GT+NA+AVLC++GKVQE+
Sbjct: 361 VVKCLDQMIHHRINPNEGTFNAIAVLCKDGKVQES 395
Score = 123 bits (308), Expect = 2e-25
Identities = 73/257 (28%), Positives = 125/257 (48%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ S L+ LC G A L+ +++ P VTYN LV L HG + +
Sbjct: 267 GFNPNVVSCNILLRSLCYEGRWEEANDLMSEMDGEERSPTIVTYNILVGSLAFHGRTEQA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
LQ++D +M+ P Y+ ++ ++ VD V+ LD++I PN ++N +
Sbjct: 327 LQIIDEMMKGPFKPTATAYNPIIARLCREGKVDLVVKCLDQMIHHRINPNEGTFNAIAV- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
CK+G+ E+ ++L +K Y V+ +C +G A LL EM +P
Sbjct: 386 LCKDGKVQESFSLIQSLSNKQTASPHDFYKGVVSCLCKKGNTYPAFQLLYEMTKYGFTPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L + G +A+EV + + + +KP+ ++N +I FCK + D ++ +
Sbjct: 446 SYTYSSLIRGLCIEGMLYEAMEVFKLLEENHYKPDVDNFNALILGFCKSHRTDLSLEVFE 505
Query: 739 QMIYRHVNPNDGTYNAL 789
MI + P++ TY L
Sbjct: 506 MMIEKGYKPSETTYTIL 522
Score = 107 bits (267), Expect = 1e-20
Identities = 57/207 (27%), Positives = 110/207 (53%), Gaps = 1/207 (0%)
Frame = +1
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
L+ L++KGL P+ + LL K + +A+R+++ +I G P+ +Y L+ CK
Sbjct: 85 LEFLVKKGLKPDAVQTTQLLYDLCKSNKMKKAIRVMEIMIGSGIIPDASAYTFLVNYLCK 144
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
G A++ + G+ PN V+YN ++R C G +++ L +++ + P+ T
Sbjct: 145 RGNIGHAMQLVEKMEEYGYPPNTVTYNSLVRGFCLNGNLNKSLQFLDKLMQKGLVPNAFT 204
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMI 747
Y+ L+ + ++A+ +L+E++ +PN SYN ++ CKEG+++ ++ +
Sbjct: 205 YSSLLEATYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIQLFRSLP 264
Query: 748 YRHVNPNDGTYN-ALAVLCEEGKVQEA 825
+ NPN + N L LC EG+ +EA
Sbjct: 265 SKGFNPNVVSCNILLRSLCYEGRWEEA 291
Score = 90.5 bits (223), Expect = 1e-15
Identities = 59/214 (27%), Positives = 99/214 (46%)
Frame = +1
Query: 28 PDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQV 207
P + +Y +I +LC+ G V ++ +D++ PN T+N++ LC G +Q S +
Sbjct: 340 PTATAYNPIIARLCREGKVDLVVKCLDQMIHHRINPNEGTFNAIAV-LCKDGKVQESFSL 398
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
+ L K Y ++ K A +LL E+ G P+ +Y+ L+ G C
Sbjct: 399 IQSLSNKQTASPHDFYKGVVSCLCKKGNTYPAFQLLYEMTKYGFTPDSYTYSSLIRGLCI 458
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
EG EA+E F+ L + P+V ++N ++ C R D + + M+ + PS T
Sbjct: 459 EGMLYEAMEVFKLLEENHYKPDVDNFNALILGFCKSHRTDLSLEVFEMMIEKGYKPSETT 518
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNAT 669
Y ILI + A EVL+E+ R +T
Sbjct: 519 YTILIEGIIHEDEKGVAAEVLKELHLRRVMSQST 552
Score = 67.4 bits (163), Expect = 1e-08
Identities = 35/135 (25%), Positives = 67/135 (49%)
Frame = +1
Query: 385 KEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVI 564
+E R +A L KG P+ V +L +C + +A ++ M+G P
Sbjct: 74 REIRLSDAFFHLEFLVKKGLKPDAVQTTQLLYDLCKSNKMKKAIRVMEIMIGSGIIPDAS 133
Query: 565 TYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQM 744
Y L++ L G A++++E+M + PN +YN ++ FC G ++ ++ LD++
Sbjct: 134 AYTFLVNYLCKRGNIGHAMQLVEKMEEYGYPPNTVTYNSLVRGFCLNGNLNKSLQFLDKL 193
Query: 745 IYRHVNPNDGTYNAL 789
+ + + PN TY++L
Sbjct: 194 MQKGLVPNAFTYSSL 208
Score = 58.9 bits (141), Expect = 4e-06
Identities = 33/102 (32%), Positives = 53/102 (51%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G PDS +Y+ LI LC G + AM++ LEE P+ +N+L+ G C S
Sbjct: 441 GFTPDSYTYSSLIRGLCIEGMLYEAMEVFKLLEENHYKPDVDNFNALILGFCKSHRTDLS 500
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEI 324
L+V + +++KG P+ TY+ L+E + A +L E+
Sbjct: 501 LEVFEMMIEKGYKPSETTYTILIEGIIHEDEKGVAAEVLKEL 542
>ref|XP_002317023.2| hypothetical protein POPTR_0011s14750g [Populus trichocarpa]
gi|550328410|gb|EEE97635.2| hypothetical protein
POPTR_0011s14750g [Populus trichocarpa]
Length = 567
Score = 432 bits (1112), Expect = e-118
Identities = 204/275 (74%), Positives = 245/275 (89%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMM+ SG IPD+ASYTFL+N LCKRGN+G+AMQLV+K+EE G P NTVTYNSLVRGLC+H
Sbjct: 121 EMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ+LD+LM KGLVPN FTYSFLLEAAYK+RGV+EA++LLDEIIAKG +PNLVSY
Sbjct: 181 GNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSY 240
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRT+EA+ FFR+LPSKGF+PNVVSYNI+LRS+C+EGRW+EAN LL+EM
Sbjct: 241 NVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDS 300
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
E RSPS++TYNILI SLA HGR + A EVL+EM+R+ FKP+AT+YNPIIA CKEGK+D
Sbjct: 301 EERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDL 360
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
V+KCLDQMI+ NPN+GT+NA+AVLC++G+V EA
Sbjct: 361 VIKCLDQMIHHRCNPNEGTFNAIAVLCKQGRVPEA 395
Score = 140 bits (353), Expect = 1e-30
Identities = 77/257 (29%), Positives = 130/257 (50%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY ++ LC G A QL+ +++ P+ VTYN L+ L HG ++H+
Sbjct: 267 GFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHA 326
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
+VLD +++ P+ TY+ ++ K+ +D ++ LD++I PN ++N +
Sbjct: 327 FEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIAV- 385
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
CK+GR EA +NL +K Y V+ S+C +G A LL EM P
Sbjct: 386 LCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPD 445
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L + G D+ALE+ + + ++P ++N +I FCK G+ D + +
Sbjct: 446 PYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDIFE 505
Query: 739 QMIYRHVNPNDGTYNAL 789
M+ + PN+ TY +
Sbjct: 506 MMVEKGYTPNETTYTII 522
Score = 125 bits (315), Expect = 3e-26
Identities = 65/235 (27%), Positives = 126/235 (53%), Gaps = 1/235 (0%)
Frame = +1
Query: 124 GCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEA 303
G P+ L+ LC ++ + +V++ +++ G++P+ +Y+FL+ K + A
Sbjct: 92 GHKPDVAQATQLLYDLCKSNKMKKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHA 151
Query: 304 VRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRS 483
++L++++ G N V+YN L+ G C G +++++ L KG PN +Y+ +L +
Sbjct: 152 MQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEA 211
Query: 484 MCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPN 663
E +EA LL E++ + P++++YN+L++ L GRT++A+ ++ F PN
Sbjct: 212 AYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPN 271
Query: 664 ATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNAL-AVLCEEGKVQEA 825
SYN I+ C EG+ + + L +M +P+ TYN L L G+++ A
Sbjct: 272 VVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHA 326
Score = 111 bits (277), Expect = 7e-22
Identities = 58/207 (28%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Frame = +1
Query: 208 LDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCK 387
L+ ++ KG P+V + LL K + +A R+++ +I G P+ SY L+ CK
Sbjct: 85 LEFIVGKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMMIESGIIPDAASYTFLVNNLCK 144
Query: 388 EGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVIT 567
G A++ + G+ N V+YN ++R +C G +++ LL +++ + P+ T
Sbjct: 145 RGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFT 204
Query: 568 YNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMI 747
Y+ L+ + ++A+++L+E++ ++PN SYN ++ CKEG+ + ++ +
Sbjct: 205 YSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 264
Query: 748 YRHVNPNDGTYN-ALAVLCEEGKVQEA 825
+ NPN +YN L LC EG+ +EA
Sbjct: 265 SKGFNPNVVSYNIILRSLCHEGRWEEA 291
Score = 95.1 bits (235), Expect = 5e-17
Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 292 VDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNI 471
+++A L+ I+ KG KP++ LL CK + +A + G P+ SY
Sbjct: 78 LNDAFFHLEFIVGKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMMIESGIIPDAASYTF 137
Query: 472 VLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSR 651
++ ++C G A L+ +M + +TYN L+ L +HG + +L++L+++M
Sbjct: 138 LVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKG 197
Query: 652 FKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNALAV-LCEEGKVQEA 825
PN +Y+ ++ KE V+ +K LD++I + PN +YN L LC+EG+ +EA
Sbjct: 198 LVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEA 256
Score = 92.8 bits (229), Expect = 3e-16
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 40/230 (17%)
Frame = +1
Query: 7 MVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSL--------- 159
MV + P + +Y +I LCK G + ++ +D++ C PN T+N++
Sbjct: 333 MVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIAVLCKQGRV 392
Query: 160 -------------------------VRGLCIHGNLQHSLQVLDRLMQKGLVPNVFTYSFL 264
+ LC GN + Q+L + + G VP+ +TYS L
Sbjct: 393 PEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSL 452
Query: 265 LEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGF 444
+ + +DEA+ + + +P L ++N L+ GFCK GRTD +++ F + KG+
Sbjct: 453 IRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDIFEMMVEKGY 512
Query: 445 DPNVVSYNIVLRSMCYEGRWDEANVLLSEMV------GETRSPSVITYNI 576
PN +Y I++ + +E + A +L E++ T V+ YN+
Sbjct: 513 TPNETTYTIIVEGIAHEEEKELAAEVLKELLLRQVMRRNTAERLVLQYNL 562
Score = 65.1 bits (157), Expect = 6e-08
Identities = 31/135 (22%), Positives = 69/135 (51%)
Frame = +1
Query: 385 KEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVI 564
+E R ++A + KG P+V +L +C + +A ++ M+ P
Sbjct: 74 REIRLNDAFFHLEFIVGKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMMIESGIIPDAA 133
Query: 565 TYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQM 744
+Y L+++L G A++++E+M + + N +YN ++ C G ++ ++ LD++
Sbjct: 134 SYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKL 193
Query: 745 IYRHVNPNDGTYNAL 789
+++ + PN+ TY+ L
Sbjct: 194 MWKGLVPNEFTYSFL 208
>ref|XP_006478018.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Citrus sinensis]
Length = 568
Score = 431 bits (1108), Expect = e-118
Identities = 206/275 (74%), Positives = 241/275 (87%)
Frame = +1
Query: 1 EMMVCSGTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIH 180
EMMV SG IPD++SYT+L+N LCK+GNVGYAMQLV+K+E++G P NTVTYNSLVRGLC+
Sbjct: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
Query: 181 GNLQHSLQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSY 360
GNL SLQ LDRL+QKGLVPN FTYSFLLEAAYK+RGV A++LLD+IIAKGGKPNLVSY
Sbjct: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
Query: 361 NVLLTGFCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVG 540
NVLLTG CKEGRT+EA+ FFRNLPSKGF+PNVVSYNI+LRS+C EGRW+EAN LL+EM G
Sbjct: 242 NVLLTGLCKEGRTEEAIRFFRNLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
Query: 541 ETRSPSVITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDF 720
RSP+V+TYNILI SLA HG+TD AL+VL+EM++ RF+P+A SYNPIIA+ C EGKVD
Sbjct: 302 GDRSPTVVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
Query: 721 VVKCLDQMIYRHVNPNDGTYNALAVLCEEGKVQEA 825
VVKCLDQM +R PN+GTYN LA+LC GKVQEA
Sbjct: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEA 396
Score = 129 bits (325), Expect = 2e-27
Identities = 77/257 (29%), Positives = 127/257 (49%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G P+ SY L+ LC G A +L+ +++ P VTYN L+ L HG H+
Sbjct: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTVVTYNILIGSLAYHGKTDHA 327
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTG 378
L+VLD +++ P+ +Y+ ++ + VD V+ LD++ + KPN +YN L
Sbjct: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
Query: 379 FCKEGRTDEAVEFFRNLPSKGFDPNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPS 558
C G+ EA ++L +K Y V+ S+C +G+ +A LL EM +P
Sbjct: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
Query: 559 VITYNILISSLALHGRTDDALEVLEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLD 738
TY+ LI L + G ++ALE+ M +KP+ ++N ++ CK + D ++
Sbjct: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
Query: 739 QMIYRHVNPNDGTYNAL 789
MI + PN+ TY L
Sbjct: 507 MMIEKGQMPNETTYTIL 523
Score = 96.7 bits (239), Expect = 2e-17
Identities = 53/187 (28%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Frame = +1
Query: 268 EAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTDEAVEFFRNLPSKGFD 447
+ ++D +++A L+ +++KG KP++V LL CK + +A++ + S G
Sbjct: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
Query: 448 PNVVSYNIVLRSMCYEGRWDEANVLLSEMVGETRSPSVITYNILISSLALHGRTDDALEV 627
P+ SY ++ +C +G A L+ +M + +TYN L+ L + G + +L+
Sbjct: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
Query: 628 LEEMMRSRFKPNATSYNPIIAQFCKEGKVDFVVKCLDQMIYRHVNPNDGTYNALAV-LCE 804
L+ +++ PNA +Y+ ++ KE V +K LD +I + PN +YN L LC+
Sbjct: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
Query: 805 EGKVQEA 825
EG+ +EA
Sbjct: 251 EGRTEEA 257
Score = 79.3 bits (194), Expect = 3e-12
Identities = 37/129 (28%), Positives = 72/129 (55%)
Frame = +1
Query: 43 YTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHSLQVLDRLM 222
Y ++I LC++G A QL+ ++ ++G P++ TY+SL+RGLC+ G ++ +L++ +
Sbjct: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
Query: 223 QKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEIIAKGGKPNLVSYNVLLTGFCKEGRTD 402
+ P+V ++ LL K R D ++ + +I KG PN +Y +L+ G + +
Sbjct: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
Query: 403 EAVEFFRNL 429
+ E + L
Sbjct: 535 LSAEVLKEL 543
Score = 62.8 bits (151), Expect = 3e-07
Identities = 32/102 (31%), Positives = 56/102 (54%)
Frame = +1
Query: 19 GTIPDSASYTFLINQLCKRGNVGYAMQLVDKLEEFGCPPNTVTYNSLVRGLCIHGNLQHS 198
G PDS +Y+ LI LC G + A+++ +EE+ P+ +N+L+ GLC S
Sbjct: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
Query: 199 LQVLDRLMQKGLVPNVFTYSFLLEAAYKDRGVDEAVRLLDEI 324
L+V +++KG +PN TY+ L+E ++ + +L E+
Sbjct: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543