BLASTX nr result

ID: Papaver29_contig00015273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00015273
         (498 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010273267.1| PREDICTED: protein CHROMATIN REMODELING 5 [N...    54   1e-07
ref|XP_008363568.1| PREDICTED: chromodomain-helicase-DNA-binding...    47   6e-06
ref|XP_008363206.1| PREDICTED: uncharacterized protein LOC103426...    47   6e-06
ref|XP_004291747.2| PREDICTED: LOW QUALITY PROTEIN: protein CHRO...    47   9e-06

>ref|XP_010273267.1| PREDICTED: protein CHROMATIN REMODELING 5 [Nelumbo nucifera]
            gi|720055101|ref|XP_010273268.1| PREDICTED: protein
            CHROMATIN REMODELING 5 [Nelumbo nucifera]
            gi|720055104|ref|XP_010273269.1| PREDICTED: protein
            CHROMATIN REMODELING 5 [Nelumbo nucifera]
          Length = 1761

 Score = 53.5 bits (127), Expect(2) = 1e-07
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
 Frame = -1

Query: 471  ISPFQTYLG--LQQIFSKLKEEQQSEA--GPSYLNGSAPDHYPNDRDNSSMQYRL*GQNI 304
            +S F    G  L QI+SKLK+EQ + A  GPS+LNGS     P DRD+   Q      + 
Sbjct: 1612 VSSFSNLSGERLHQIYSKLKQEQNAVAAVGPSHLNGSVSG--PMDRDSDPSQCPSFSHSN 1669

Query: 303  PNPKGF*KHPPQRAS*SFHRDQESAKS 223
              P+G+ K    + S +FH++Q++ KS
Sbjct: 1670 DKPRGYKKFTSHQPSEAFHKEQDTGKS 1696



 Score = 28.5 bits (62), Expect(2) = 1e-07
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -3

Query: 496  MIKRLWNYDFTFSNLSG 446
            M  RLWNY  +FSNLSG
Sbjct: 1604 MTMRLWNYVSSFSNLSG 1620


>ref|XP_008363568.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Malus
            domestica]
          Length = 1160

 Score = 47.0 bits (110), Expect(2) = 6e-06
 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = -1

Query: 471  ISPFQTYLG--LQQIFSKLKEEQQSEAGPSYLNGSAPDHYPNDRDNSSMQYRL*GQNIPN 298
            +S F    G  L QI+SKLK+ Q  EAGPS++NGSA   +  D D+S   +    Q  P+
Sbjct: 1023 VSTFSNLSGERLHQIYSKLKQHQDVEAGPSHMNGSASGPFGRDNDSSPFSFHSDRQRGPD 1082

Query: 297  PKGF 286
               F
Sbjct: 1083 TAKF 1086



 Score = 29.6 bits (65), Expect(2) = 6e-06
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = -3

Query: 496  MIKRLWNYDFTFSNLSG 446
            M  RLWNY  TFSNLSG
Sbjct: 1015 MSMRLWNYVSTFSNLSG 1031


>ref|XP_008363206.1| PREDICTED: uncharacterized protein LOC103426900 [Malus domestica]
          Length = 226

 Score = 47.0 bits (110), Expect(2) = 6e-06
 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = -1

Query: 471 ISPFQTYLG--LQQIFSKLKEEQQSEAGPSYLNGSAPDHYPNDRDNSSMQYRL*GQNIPN 298
           +S F    G  L QI+SKLK+ Q  EAGPS++NGSA   +  D D+S   +    Q  P+
Sbjct: 89  VSTFSNLSGERLHQIYSKLKQHQDVEAGPSHMNGSASGPFGRDNDSSPFSFHSDRQRGPD 148

Query: 297 PKGF 286
              F
Sbjct: 149 TAKF 152



 Score = 29.6 bits (65), Expect(2) = 6e-06
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = -3

Query: 496 MIKRLWNYDFTFSNLSG 446
           M  RLWNY  TFSNLSG
Sbjct: 81  MSMRLWNYVSTFSNLSG 97


>ref|XP_004291747.2| PREDICTED: LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 5
            [Fragaria vesca subsp. vesca]
          Length = 1774

 Score = 47.4 bits (111), Expect(2) = 9e-06
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
 Frame = -1

Query: 471  ISPFQTYLG--LQQIFSKLKEEQQSEAGPSYLNGSAPDHYPNDRDNSSMQY 325
            +S F    G  L QI+SKLK+EQ  EAGPS++NGSA   +  D D +S  +
Sbjct: 1609 VSTFSNLSGERLHQIYSKLKQEQDEEAGPSHINGSASGPFGRDSDPTSFSH 1659



 Score = 28.5 bits (62), Expect(2) = 9e-06
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -3

Query: 496  MIKRLWNYDFTFSNLSG 446
            M  RLWN+  TFSNLSG
Sbjct: 1601 MTTRLWNFVSTFSNLSG 1617


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