BLASTX nr result
ID: Papaver29_contig00013452
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00013452
(1081 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale] 463 e-127
ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III s... 425 e-116
ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s... 424 e-116
ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III s... 417 e-114
ref|XP_008803030.1| PREDICTED: DNA-directed RNA polymerase III s... 415 e-113
ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III s... 411 e-112
ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III s... 411 e-112
ref|XP_010033188.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 405 e-110
gb|KCW52757.1| hypothetical protein EUGRSUZ_J02108 [Eucalyptus g... 405 e-110
emb|CDP20047.1| unnamed protein product [Coffea canephora] 402 e-109
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu... 402 e-109
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 402 e-109
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 402 e-109
ref|XP_008222562.1| PREDICTED: DNA-directed RNA polymerase III s... 399 e-108
gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria ital... 398 e-108
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 398 e-108
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 397 e-108
ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s... 397 e-107
ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s... 396 e-107
ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III s... 396 e-107
>gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]
Length = 554
Score = 463 bits (1191), Expect = e-127
Identities = 238/327 (72%), Positives = 259/327 (79%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
QPGCDAAQTLE+E+T + N +REK +CM LHWRNSPLIMSQCGSK
Sbjct: 230 QPGCDAAQTLEAEITGIQNNIREKAATVCMEN------------LHWRNSPLIMSQCGSK 277
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NI+QMIACVGQQSVGGRRA NGFIDR+LPHFP+NS PDA+GFVENSFYTGLT TE
Sbjct: 278 GSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATE 337
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTADTGYMSRRLIKALEDLSI YD+TVRSASG V+QF+YGDDG
Sbjct: 338 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDG 397
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDPS+MEGKDG+PLN DRLYMK KATCPARGHSSLSP EI KL +RLS+ MTPEGG
Sbjct: 398 MDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPAEILKLVVARLSKHDMTPEGGC- 456
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEEKMDSQSLEK 902
+AFKKSLLD L KCITSL NTR+ LQLD K S+SLEK
Sbjct: 457 ---------SDAFKKSLLDEEGFMQNKEGGFLGKCITSLKNTRRDLQLDGVKKGSESLEK 507
Query: 903 VSANVAGITLQQLQVFLETCISRYYTK 983
VSAN+AGITLQQLQVFLETCISRY+ K
Sbjct: 508 VSANIAGITLQQLQVFLETCISRYHLK 534
>ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Elaeis
guineensis]
Length = 1369
Score = 425 bits (1092), Expect = e-116
Identities = 222/362 (61%), Positives = 256/362 (70%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
QPGC+AAQTLE ++T +LN +R G +CM +LHWRNSPLIMSQCGSK
Sbjct: 720 QPGCNAAQTLELKITGVLNQIRATAGNVCMN------------ELHWRNSPLIMSQCGSK 767
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQM+ACVGQQSVGGRRA NGFIDR LPHFP NS P A+GFV NSFYTGLTPTE
Sbjct: 768 GSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTPTE 827
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTA+TGYMSRRL+K LEDLSI YD TVR+ASG ++QF+YGDDG
Sbjct: 828 FFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQTVRTASGSIVQFVYGDDG 887
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDP+KMEGKDG PLN D+L+MK ATCP R +LSP EI + D RLS+ MTPEGG
Sbjct: 888 MDPAKMEGKDGIPLNLDQLFMKIMATCPLREQDTLSPAEILHIMDDRLSKYDMTPEGGC- 946
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDE---EKMDSQS 893
+FKK L D L+K + +L N R+ LQLDE +K D
Sbjct: 947 ---------SASFKKMLSD-----------FLHKRVAALCNIRRALQLDENHLQKQDYSV 986
Query: 894 LEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1073
LE V+AN++GI+ +QLQVFLETCISRY+ K+ EPGTQMTLKTFHF
Sbjct: 987 LESVAANISGISAKQLQVFLETCISRYHLKKIEAGGAIGAIGAQSIGEPGTQMTLKTFHF 1046
Query: 1074 AG 1079
AG
Sbjct: 1047 AG 1048
>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
nucifera]
Length = 1392
Score = 424 bits (1089), Expect = e-116
Identities = 222/362 (61%), Positives = 261/362 (72%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
+PGCDAAQTLE+++T LN +RE+T +CM +LHWRNSPLIMSQCGSK
Sbjct: 743 EPGCDAAQTLEAQITRKLNEIREETAAVCMQ------------ELHWRNSPLIMSQCGSK 790
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQMIACVGQQSVGGRRA NGFIDR+LPHFP+ S P A+GFV NSFYTGLT TE
Sbjct: 791 GSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATE 850
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTADTGYMSRRLIKALEDL++ YD+TVR+ASG V+QF+YGDDG
Sbjct: 851 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLAVYYDDTVRNASGGVVQFLYGDDG 910
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
+DP+ MEGK G PLN +R+Y+K KATCP+ ++SL P+EI K+ D R+S MTP+GG
Sbjct: 911 LDPANMEGKKGIPLNLERVYLKTKATCPSGTNASLCPSEIVKILDDRISRYDMTPDGGC- 969
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEE---KMDSQS 893
AFKK L+D + I+ L NTRK L LDEE K +S
Sbjct: 970 ---------SSAFKKLLVD-----------FIQNRISILRNTRKALGLDEEYAKKDNSDI 1009
Query: 894 LEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1073
LE ++AN++GIT QQL+VFLETCISRY+ KR EPGTQMTLKTFHF
Sbjct: 1010 LEHIAANISGITTQQLKVFLETCISRYHLKRIEAGAAIGAIGAQSIGEPGTQMTLKTFHF 1069
Query: 1074 AG 1079
AG
Sbjct: 1070 AG 1071
>ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Musa
acuminata subsp. malaccensis]
Length = 1372
Score = 417 bits (1073), Expect = e-114
Identities = 218/362 (60%), Positives = 257/362 (70%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
QPGC+AAQTLE ++T +LN +R G +CM +LHWRNSPLIMSQCGSK
Sbjct: 723 QPGCNAAQTLELKITGVLNQIRAIAGNVCMN------------ELHWRNSPLIMSQCGSK 770
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQM++CVGQQSVGGRRA NGFIDR LPHFP NS P A+GFV NSFYTGLT TE
Sbjct: 771 GSPINISQMVSCVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATE 830
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTA+TGYMSRRL+K LEDLSI YD TVR+ASG ++QF+YGDDG
Sbjct: 831 FFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDETVRNASGGIVQFLYGDDG 890
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDP+KMEGKDG PLN D+L+MK ATCP R H LSPTE ++ D RL++ M+PEGG
Sbjct: 891 MDPAKMEGKDGIPLNMDQLFMKVMATCPPREHDMLSPTEALRIMDDRLAKYDMSPEGGC- 949
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEEKM---DSQS 893
AFKK L D ++K +++L N RK L+LDE M DS
Sbjct: 950 ---------SAAFKKLLSD-----------FVHKRVSALANMRKSLKLDETDMGRKDSTV 989
Query: 894 LEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1073
LE V+A ++GI+ +QL+VFLETCISRY++K+ EPGTQMTLKTFHF
Sbjct: 990 LENVAAKISGISSKQLEVFLETCISRYHSKKVEAGAAIGAIGAQSIGEPGTQMTLKTFHF 1049
Query: 1074 AG 1079
AG
Sbjct: 1050 AG 1051
>ref|XP_008803030.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Phoenix
dactylifera]
Length = 1018
Score = 415 bits (1067), Expect = e-113
Identities = 218/362 (60%), Positives = 253/362 (69%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
Q GC+AAQTLE ++T +LN +R G +CM +LHWRNSPLIMSQCGSK
Sbjct: 369 QSGCNAAQTLELKITGVLNQIRSTAGNVCMN------------ELHWRNSPLIMSQCGSK 416
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQM+ACVGQQSVGGRRA NGFIDR LPHFP +S P A+GFV NSFYTGLTPTE
Sbjct: 417 GSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPISSKTPAAKGFVANSFYTGLTPTE 476
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTA+TGYMSRRL+K LEDLSI YD TVR+A+G ++QF+YGDDG
Sbjct: 477 FFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQTVRTANGSIVQFVYGDDG 536
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDP+KMEGKDG PLN D+L+MK ATCP R +LSP EI D RLS+ TPEGG
Sbjct: 537 MDPAKMEGKDGIPLNLDQLFMKVMATCPLREQDTLSPAEILHTLDDRLSKYDTTPEGGC- 595
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDE---EKMDSQS 893
AFKK L D L+K + +N R+ LQLDE +K DS
Sbjct: 596 ---------SAAFKKMLSD-----------FLHKHAAAFSNIRRALQLDENHVQKKDSSV 635
Query: 894 LEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1073
LE V+AN++GI+ +QLQVFLETCI RY++K+ EPGTQMTLKTFHF
Sbjct: 636 LESVAANISGISAKQLQVFLETCIFRYHSKKIEAGAAIGAIGAQSIGEPGTQMTLKTFHF 695
Query: 1074 AG 1079
AG
Sbjct: 696 AG 697
>ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
[Amborella trichopoda]
Length = 1367
Score = 411 bits (1057), Expect = e-112
Identities = 218/362 (60%), Positives = 255/362 (70%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
+PGC+AAQTLE+E+T +LNG+R+ K+CM +LHWRNSPLIMSQCGSK
Sbjct: 730 KPGCNAAQTLEAEITRVLNGIRDAAAKVCME------------ELHWRNSPLIMSQCGSK 777
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQMIACVGQQSVGGRRA NGFIDR+LPHFP+N P A+GFV NSFYTGLT E
Sbjct: 778 GSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTAAE 837
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTADTGY+SRRLIK+LEDLS YD+TVR++SG +IQF YGDDG
Sbjct: 838 FFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGDDG 897
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDP+KMEGK G PLN DRL+MK KATCPA +SLSP+EI + + RLS+ MTPE G
Sbjct: 898 MDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPERGC- 956
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEEKMDSQ---S 893
AF E F K +D ++ TR L LDE+ +D +
Sbjct: 957 --SMAFKEELSNFIKKRMD------------------AIKKTRNMLGLDEDCVDKEKFSG 996
Query: 894 LEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1073
LE V+AN++GI+ QQL+VFLETCISRY+ KR EPGTQMTLKTFHF
Sbjct: 997 LEHVAANISGISRQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHF 1056
Query: 1074 AG 1079
AG
Sbjct: 1057 AG 1058
>ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
[Amborella trichopoda] gi|548832896|gb|ERM95665.1|
hypothetical protein AMTR_s00023p00196820 [Amborella
trichopoda]
Length = 1383
Score = 411 bits (1057), Expect = e-112
Identities = 218/362 (60%), Positives = 255/362 (70%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
+PGC+AAQTLE+E+T +LNG+R+ K+CM +LHWRNSPLIMSQCGSK
Sbjct: 730 KPGCNAAQTLEAEITRVLNGIRDAAAKVCME------------ELHWRNSPLIMSQCGSK 777
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQMIACVGQQSVGGRRA NGFIDR+LPHFP+N P A+GFV NSFYTGLT E
Sbjct: 778 GSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTAAE 837
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTADTGY+SRRLIK+LEDLS YD+TVR++SG +IQF YGDDG
Sbjct: 838 FFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGDDG 897
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDP+KMEGK G PLN DRL+MK KATCPA +SLSP+EI + + RLS+ MTPE G
Sbjct: 898 MDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPERGC- 956
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEEKMDSQ---S 893
AF E F K +D ++ TR L LDE+ +D +
Sbjct: 957 --SMAFKEELSNFIKKRMD------------------AIKKTRNMLGLDEDCVDKEKFSG 996
Query: 894 LEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1073
LE V+AN++GI+ QQL+VFLETCISRY+ KR EPGTQMTLKTFHF
Sbjct: 997 LEHVAANISGISRQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHF 1056
Query: 1074 AG 1079
AG
Sbjct: 1057 AG 1058
>ref|XP_010033188.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit rpc1 [Eucalyptus grandis]
Length = 1402
Score = 405 bits (1040), Expect = e-110
Identities = 210/365 (57%), Positives = 250/365 (68%), Gaps = 6/365 (1%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
QPGCDAAQTLE+ +T +LN +R +TG++CM KLHWRNSPLIMSQCGSK
Sbjct: 740 QPGCDAAQTLEAVITGILNQIRNETGQVCMK------------KLHWRNSPLIMSQCGSK 787
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQMIACVGQQSVGGRRA NGFIDR+LPHFP+ S P A+GFV NSFY+GLT TE
Sbjct: 788 GSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRQSKTPAAKGFVANSFYSGLTATE 847
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTADTGYMSRRLIKALEDLSI YDNTVR+ASG ++QF+YGDDG
Sbjct: 848 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFLYGDDG 907
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDP+ MEGK+G PLNFDRL+MK KATCP+R H LSP EI L + +L E TP+GG
Sbjct: 908 MDPALMEGKNGFPLNFDRLFMKVKATCPSREHKYLSPVEISALIEQKLPESESTPDGGLS 967
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQL------DEEKMD 884
+ +AF + +AF L KG ++ D +
Sbjct: 968 DASKAFKKSVKAFL------------------------LEEHEKGSEIIMKFGEDATVEN 1003
Query: 885 SQSLEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKT 1064
+++ +V+ + GIT QL+ F++TC+SRY+ KR EPGTQMTLKT
Sbjct: 1004 QETVIRVAQKIGGITEGQLRAFIDTCMSRYHLKRIEAGSAIGAIGAQSIGEPGTQMTLKT 1063
Query: 1065 FHFAG 1079
FHFAG
Sbjct: 1064 FHFAG 1068
>gb|KCW52757.1| hypothetical protein EUGRSUZ_J02108 [Eucalyptus grandis]
Length = 1184
Score = 405 bits (1040), Expect = e-110
Identities = 210/365 (57%), Positives = 250/365 (68%), Gaps = 6/365 (1%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
QPGCDAAQTLE+ +T +LN +R +TG++CM KLHWRNSPLIMSQCGSK
Sbjct: 522 QPGCDAAQTLEAVITGILNQIRNETGQVCMK------------KLHWRNSPLIMSQCGSK 569
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQMIACVGQQSVGGRRA NGFIDR+LPHFP+ S P A+GFV NSFY+GLT TE
Sbjct: 570 GSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRQSKTPAAKGFVANSFYSGLTATE 629
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTADTGYMSRRLIKALEDLSI YDNTVR+ASG ++QF+YGDDG
Sbjct: 630 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFLYGDDG 689
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDP+ MEGK+G PLNFDRL+MK KATCP+R H LSP EI L + +L E TP+GG
Sbjct: 690 MDPALMEGKNGFPLNFDRLFMKVKATCPSREHKYLSPVEISALIEQKLPESESTPDGGLS 749
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQL------DEEKMD 884
+ +AF + +AF L KG ++ D +
Sbjct: 750 DASKAFKKSVKAFL------------------------LEEHEKGSEIIMKFGEDATVEN 785
Query: 885 SQSLEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKT 1064
+++ +V+ + GIT QL+ F++TC+SRY+ KR EPGTQMTLKT
Sbjct: 786 QETVIRVAQKIGGITEGQLRAFIDTCMSRYHLKRIEAGSAIGAIGAQSIGEPGTQMTLKT 845
Query: 1065 FHFAG 1079
FHFAG
Sbjct: 846 FHFAG 850
>emb|CDP20047.1| unnamed protein product [Coffea canephora]
Length = 611
Score = 402 bits (1034), Expect = e-109
Identities = 215/359 (59%), Positives = 248/359 (69%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
QPG DAA TLE+++T +LN +R+ K C+ L WRNSPLIMSQCGSK
Sbjct: 227 QPGHDAALTLEAKITKVLNDIRDIAAKECLTC------------LQWRNSPLIMSQCGSK 274
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQM+ACVGQQSVGGRRA NGFIDR+LPHFP+ S P ARGFV NSFY+GL+ TE
Sbjct: 275 GSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLSATE 334
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDLSIQYDNTVR+AS ++QF+YGDDG
Sbjct: 335 FFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDNTVRNASSCIVQFVYGDDG 394
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDPS+ME K G PLNFDRL MK KATCPA SLSP++I K D RLSE TPEGG
Sbjct: 395 MDPSQMEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDTTPEGGC- 453
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEEKMDSQSLEK 902
EAF + F K KC+ +L T + L+ EE +S S E
Sbjct: 454 --SEAFRDSLSKFLK-----------------VKCVQNLEKTIESLKAQEEDHNS-SFEN 493
Query: 903 VSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 1079
+S+N++G T +QL+VFL CISRY+TKR EPGTQMTLKTFHFAG
Sbjct: 494 ISSNISGFTSRQLEVFLRVCISRYHTKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 552
>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
Length = 546
Score = 402 bits (1034), Expect = e-109
Identities = 213/347 (61%), Positives = 245/347 (70%), Gaps = 1/347 (0%)
Frame = +3
Query: 6 PGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSKG 185
PGC+AAQTLES +T LN +RE K+CM + LHWRNSPLIMSQCGSKG
Sbjct: 233 PGCNAAQTLESNITGKLNDIREAAAKVCMAS------------LHWRNSPLIMSQCGSKG 280
Query: 186 SPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTEF 365
SP NISQM+ACVGQQSVGGRRA NGFIDR+LPHFP NS P A+GFV NSFYTGLT TEF
Sbjct: 281 SPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPSAKGFVANSFYTGLTATEF 340
Query: 366 FFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDGM 545
FFHTM GREGLVDTAVKTA+TGYMSRRL+K+LEDLS YD TVR++SG ++Q +YGDDGM
Sbjct: 341 FFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGM 400
Query: 546 DPSKMEGKDGSPLNFDRLYMKAKATCPA-RGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
DP+ MEGK+G PLN DRL+MK KAT PA R H+SLSP+EI K AD RLS+ MTPEGG
Sbjct: 401 DPANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEILKAADDRLSKHDMTPEGGC- 459
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEEKMDSQSLEK 902
AFK+SL D L KC+ +L TR+ L LDE+K+ LE
Sbjct: 460 ---------SAAFKESLSD-----------FLKKCVVALRKTRRELGLDEDKVREHVLEN 499
Query: 903 VSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPG 1043
V+AN++GIT QQLQVFLETCI RY+ KR EPG
Sbjct: 500 VAANISGITSQQLQVFLETCIHRYHLKRLEAGAAIGAIGAQSIGEPG 546
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 402 bits (1033), Expect = e-109
Identities = 211/362 (58%), Positives = 253/362 (69%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
QPGC+AAQTLE +T +LN +RE+ GK+CM T LHWRNSPLIMSQCGSK
Sbjct: 668 QPGCNAAQTLEQSITRVLNEIREEAGKVCMNT------------LHWRNSPLIMSQCGSK 715
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQM+ACVGQQSVGGRRA NGFIDR LPHFP NS P A+GFV NSFYTGLT TE
Sbjct: 716 GSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATE 775
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVR+ASG ++QF+YGDDG
Sbjct: 776 FFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDG 835
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDP+KMEGKDG PLN D+L+MK ATCP RG ++LSP EI ++ + +LSE + + G
Sbjct: 836 MDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDDGC- 894
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEE---KMDSQS 893
E FK+ L L I L +TR+ L LDE+ + S
Sbjct: 895 ---------SEKFKQLL-----------TYFLEDRIKLLKSTRRALLLDEDHVGERHSSF 934
Query: 894 LEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1073
E ++AN++GI+++QLQVFL+TC+SRY+ K+ EPGTQMTLKTFHF
Sbjct: 935 EESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHF 994
Query: 1074 AG 1079
AG
Sbjct: 995 AG 996
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
gi|937914934|dbj|BAS89853.1| Os04g0492300 [Oryza sativa
Japonica Group]
Length = 1383
Score = 402 bits (1033), Expect = e-109
Identities = 211/362 (58%), Positives = 253/362 (69%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
QPGC+AAQTLE +T +LN +RE+ GK+CM T LHWRNSPLIMSQCGSK
Sbjct: 730 QPGCNAAQTLEQSITRVLNEIREEAGKVCMNT------------LHWRNSPLIMSQCGSK 777
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQM+ACVGQQSVGGRRA NGFIDR LPHFP NS P A+GFV NSFYTGLT TE
Sbjct: 778 GSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATE 837
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVR+ASG ++QF+YGDDG
Sbjct: 838 FFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDG 897
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDP+KMEGKDG PLN D+L+MK ATCP RG ++LSP EI ++ + +LSE + + G
Sbjct: 898 MDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDDGC- 956
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEE---KMDSQS 893
E FK+ L L I L +TR+ L LDE+ + S
Sbjct: 957 ---------SEKFKQLL-----------TYFLEDRIKLLKSTRRALLLDEDHVGERHSSF 996
Query: 894 LEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1073
E ++AN++GI+++QLQVFL+TC+SRY+ K+ EPGTQMTLKTFHF
Sbjct: 997 EESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHF 1056
Query: 1074 AG 1079
AG
Sbjct: 1057 AG 1058
>ref|XP_008222562.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Prunus mume]
Length = 1425
Score = 399 bits (1025), Expect = e-108
Identities = 211/362 (58%), Positives = 252/362 (69%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
+PGCDAAQ+LES +T +LN +R++TGK+CM T LHWRNSPLIMSQCGSK
Sbjct: 744 EPGCDAAQSLESGITKILNNIRDQTGKLCMQT------------LHWRNSPLIMSQCGSK 791
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQMIACVGQQSVGGRRA NGFIDR+LPHFP+ + P A+GFV +SFY+GLT TE
Sbjct: 792 GSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKAKTPAAKGFVASSFYSGLTATE 851
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTADTGYMSRRL K LEDLS+QYDNTVR+ASG ++QF YGDDG
Sbjct: 852 FFFHTMGGREGLVDTAVKTADTGYMSRRLSKILEDLSVQYDNTVRNASGCIVQFCYGDDG 911
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDP+ MEG+ G+PL+F RL++KAKATCPA + SLS E+ ++ RLS+ MTP+ G
Sbjct: 912 MDPAMMEGEGGAPLDFRRLFLKAKATCPAGENESLSLEEVSEIVKDRLSKQDMTPDRGCS 971
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEE---KMDSQS 893
G FK SL + L K L T LD+ K S S
Sbjct: 972 AG----------FKSSLEE-----------FLDKYAKELRKTHDTFVLDQSPAWKEKSAS 1010
Query: 894 LEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1073
LEK+ N++G+T +QL+VFL TCISRY++K+ EPGTQMTLKTFHF
Sbjct: 1011 LEKIVQNISGVTCKQLEVFLNTCISRYHSKKVEAGTAIGVIGAQSIGEPGTQMTLKTFHF 1070
Query: 1074 AG 1079
AG
Sbjct: 1071 AG 1072
>gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria italica]
Length = 1394
Score = 398 bits (1023), Expect = e-108
Identities = 212/361 (58%), Positives = 252/361 (69%), Gaps = 3/361 (0%)
Frame = +3
Query: 6 PGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSKG 185
PGC+AAQTLE ++T +LN +R G +CM T LHWRNSPLIMSQCGSKG
Sbjct: 741 PGCNAAQTLEHKITGVLNEIRTAAGNVCMDT------------LHWRNSPLIMSQCGSKG 788
Query: 186 SPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTEF 365
SP NISQM+ACVGQQSVGGRRA +GFIDR LPHFP NS P A+GFV NSFYTGLT TEF
Sbjct: 789 SPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEF 848
Query: 366 FFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDGM 545
FFHTM GREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVR+ASG ++QF+YGDDGM
Sbjct: 849 FFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGM 908
Query: 546 DPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFKE 725
DP+KMEGKDG+PLN D+L+MK ATCP RG +LSP +IK++ + +L++ + +GG E
Sbjct: 909 DPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIKQMLEDKLTQHKTSSDGGCSE 968
Query: 726 GEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEE---KMDSQSL 896
E KE KK L + L KC TRK L LDE+ K DS
Sbjct: 969 ------EFKECLKKFLEE---------RIQLLKC------TRKALHLDEKHVGKNDSCIE 1007
Query: 897 EKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFA 1076
E ++AN++GI+ +QLQVFL+TC SRY +K EPGTQMTLKTFHFA
Sbjct: 1008 EIIAANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFA 1067
Query: 1077 G 1079
G
Sbjct: 1068 G 1068
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Setaria
italica]
Length = 1397
Score = 398 bits (1023), Expect = e-108
Identities = 212/361 (58%), Positives = 252/361 (69%), Gaps = 3/361 (0%)
Frame = +3
Query: 6 PGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSKG 185
PGC+AAQTLE ++T +LN +R G +CM T LHWRNSPLIMSQCGSKG
Sbjct: 744 PGCNAAQTLEHKITGVLNEIRTAAGNVCMDT------------LHWRNSPLIMSQCGSKG 791
Query: 186 SPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTEF 365
SP NISQM+ACVGQQSVGGRRA +GFIDR LPHFP NS P A+GFV NSFYTGLT TEF
Sbjct: 792 SPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEF 851
Query: 366 FFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDGM 545
FFHTM GREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVR+ASG ++QF+YGDDGM
Sbjct: 852 FFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGM 911
Query: 546 DPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFKE 725
DP+KMEGKDG+PLN D+L+MK ATCP RG +LSP +IK++ + +L++ + +GG E
Sbjct: 912 DPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIKQMLEDKLTQHKTSSDGGCSE 971
Query: 726 GEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEE---KMDSQSL 896
E KE KK L + L KC TRK L LDE+ K DS
Sbjct: 972 ------EFKECLKKFLEE---------RIQLLKC------TRKALHLDEKHVGKNDSCIE 1010
Query: 897 EKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFA 1076
E ++AN++GI+ +QLQVFL+TC SRY +K EPGTQMTLKTFHFA
Sbjct: 1011 EIIAANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFA 1070
Query: 1077 G 1079
G
Sbjct: 1071 G 1071
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Vitis
vinifera]
Length = 1383
Score = 397 bits (1021), Expect = e-108
Identities = 213/362 (58%), Positives = 253/362 (69%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
QPGC+AAQTLE+E+T +LN +RE T +CM +LHWRNSPLIMSQCGSK
Sbjct: 736 QPGCNAAQTLEAEITGVLNKIRETTANVCME------------ELHWRNSPLIMSQCGSK 783
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQMIACVGQQSVGGRRA +GFIDR LPHFP+ S PDA+GFV +SFYTGLT TE
Sbjct: 784 GSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATE 843
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDLSIQYD TVR+A+G ++QF+YGDDG
Sbjct: 844 FFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDG 903
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDP++MEGKDG PLNF+RL++K KATCPA ++SLS +I++ RL E + EG
Sbjct: 904 MDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETV-KRLKEHNTSAEG--- 959
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEEKMDSQSL-- 896
+AFK +L L +C NTR+ L L E + ++L
Sbjct: 960 --------CSDAFKTNL-----------SGFLEECKEKFKNTREALGLHGEHVGEENLDI 1000
Query: 897 -EKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1073
EK + N++GIT +QLQVFL+TCISRY KR EPGTQMTLKTFHF
Sbjct: 1001 QEKFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHF 1060
Query: 1074 AG 1079
AG
Sbjct: 1061 AG 1062
>ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
sylvestris]
Length = 1390
Score = 397 bits (1019), Expect = e-107
Identities = 215/362 (59%), Positives = 248/362 (68%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
QPGCDAAQTLE+E+T LN VR+ GKICM LHWRNSPLIMSQCGSK
Sbjct: 732 QPGCDAAQTLEAEVTMALNKVRDDIGKICMKA------------LHWRNSPLIMSQCGSK 779
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQMIACVGQQSVGGRRA +GFIDR+LPHFP S P A+GFV +SF+ GL+ TE
Sbjct: 780 GSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLSATE 839
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDL++ YDNTVR+AS +IQF+YGDDG
Sbjct: 840 FFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASASIIQFMYGDDG 899
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDPS+ME K G PLNF RL+MK KATCP RG LS +EI ++ + RLS M+PEGG
Sbjct: 900 MDPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKGLSYSEICEIVNERLSYHDMSPEGGC- 958
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEEKM---DSQS 893
EAF+ SL D + +L R+ L L EE+ D +
Sbjct: 959 ---------SEAFRASLSD----------FLIKNLAETLKRLREALLLGEEQYAGGDREY 999
Query: 894 LEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1073
LE V+ N++GIT +QLQVFL CISRY+ KR EPGTQMTLKTFHF
Sbjct: 1000 LENVALNISGITKKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHF 1059
Query: 1074 AG 1079
AG
Sbjct: 1060 AG 1061
>ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
[Nicotiana tomentosiformis]
gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1 isoform X2 [Nicotiana
tomentosiformis]
Length = 1375
Score = 396 bits (1018), Expect = e-107
Identities = 215/362 (59%), Positives = 249/362 (68%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
QPGCDAAQTLE+E+T LN VR+ GKICM LHWRNSPLIMSQCGSK
Sbjct: 732 QPGCDAAQTLEAEVTMSLNKVRDDIGKICMKA------------LHWRNSPLIMSQCGSK 779
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQMIACVGQQSVGGRRA +GFIDR+LPHFP S P A+GFV +SF+ GL+ TE
Sbjct: 780 GSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLSATE 839
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDL++ YDNTVR+AS +IQF+YGDDG
Sbjct: 840 FFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASTSIIQFMYGDDG 899
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDPS+ME K G PLNF RL+MK KATCP RG SLS +EI ++ + RLS M+PEGG
Sbjct: 900 MDPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKSLSYSEICEIVNERLSYHDMSPEGGC- 958
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEEKM---DSQS 893
EAF+ SL D + +L R+ L LD E+ D +
Sbjct: 959 ---------SEAFRASLSD----------FLIKHLAETLKRLREALLLDGEQYAGGDREY 999
Query: 894 LEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1073
LE ++ N++GIT +QLQVFL CISRY+ KR EPGTQMTLKTFHF
Sbjct: 1000 LENIALNISGITKKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHF 1059
Query: 1074 AG 1079
AG
Sbjct: 1060 AG 1061
>ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
[Nicotiana tomentosiformis]
gi|697112870|ref|XP_009610318.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1 isoform X1 [Nicotiana
tomentosiformis]
Length = 1390
Score = 396 bits (1018), Expect = e-107
Identities = 215/362 (59%), Positives = 249/362 (68%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 QPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHWRNSPLIMSQCGSK 182
QPGCDAAQTLE+E+T LN VR+ GKICM LHWRNSPLIMSQCGSK
Sbjct: 732 QPGCDAAQTLEAEVTMSLNKVRDDIGKICMKA------------LHWRNSPLIMSQCGSK 779
Query: 183 GSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGFVENSFYTGLTPTE 362
GSP NISQMIACVGQQSVGGRRA +GFIDR+LPHFP S P A+GFV +SF+ GL+ TE
Sbjct: 780 GSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLSATE 839
Query: 363 FFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSASGRVIQFIYGDDG 542
FFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDL++ YDNTVR+AS +IQF+YGDDG
Sbjct: 840 FFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASTSIIQFMYGDDG 899
Query: 543 MDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSRLSELIMTPEGGFK 722
MDPS+ME K G PLNF RL+MK KATCP RG SLS +EI ++ + RLS M+PEGG
Sbjct: 900 MDPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKSLSYSEICEIVNERLSYHDMSPEGGC- 958
Query: 723 EGEEAFSEGKEAFKKSLLDXXXXXXXXXXXXLYKCITSLTNTRKGLQLDEEKM---DSQS 893
EAF+ SL D + +L R+ L LD E+ D +
Sbjct: 959 ---------SEAFRASLSD----------FLIKHLAETLKRLREALLLDGEQYAGGDREY 999
Query: 894 LEKVSANVAGITLQQLQVFLETCISRYYTKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1073
LE ++ N++GIT +QLQVFL CISRY+ KR EPGTQMTLKTFHF
Sbjct: 1000 LENIALNISGITKKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHF 1059
Query: 1074 AG 1079
AG
Sbjct: 1060 AG 1061