BLASTX nr result

ID: Papaver29_contig00012475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00012475
         (1340 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350898.1| PREDICTED: GTP-binding nuclear protein Ran-1...    44   3e-06
gb|KCW79768.1| hypothetical protein EUGRSUZ_C01111 [Eucalyptus g...    46   6e-06
ref|XP_010047784.1| PREDICTED: GTP-binding nuclear protein Ran-2...    46   6e-06
ref|XP_010047785.1| PREDICTED: GTP-binding nuclear protein Ran-2...    46   6e-06

>ref|XP_006350898.1| PREDICTED: GTP-binding nuclear protein Ran-1-like [Solanum
           tuberosum]
          Length = 230

 Score = 44.3 bits (103), Expect(2) = 3e-06
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = -3

Query: 765 KELSSMFDNRPIVLVGNKADSTRKR-KVQDITADKELKELNRPFYEISARDKVHIRKPFL 589
           ++L    +N P VL GNK D   K+ K ++I   +  K  N P+YEISA+   ++  PFL
Sbjct: 109 RDLFRFCENVPFVLCGNKIDIKHKQVKAKEINFYRRKK--NWPYYEISAKSNYNLELPFL 166

Query: 588 ILAR 577
            LAR
Sbjct: 167 FLAR 170



 Score = 36.2 bits (82), Expect(2) = 3e-06
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 13/90 (14%)
 Frame = -1

Query: 1019 SYMILVLGYHGSGKTTLL-QNVNG------EPKEAANEYTVEFQTNGNGPIRFLCVESMD 861
            S+ +++LG  G+GKTT L +++NG      EP  +   + ++F TN  G IRF C +++ 
Sbjct: 13   SFKLVILGDGGTGKTTFLKRHLNGEFDRKYEPTISVEVHPLDFFTN-YGKIRFNCWDTVG 71

Query: 860  NDITKSWKYNGY------LILCDLTNKYSY 789
             +     + N Y      +I+ D T + SY
Sbjct: 72   QENFGGVRDNYYIHGQCAIIMFDFTVRLSY 101


>gb|KCW79768.1| hypothetical protein EUGRSUZ_C01111 [Eucalyptus grandis]
          Length = 321

 Score = 45.8 bits (107), Expect(2) = 6e-06
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -3

Query: 765 KELSSMFDNRPIVLVGNKAD-STRKRKVQDITADKELKELNRPFYEISARDKVHIRKPFL 589
           ++L  + +N PIVL GNK D   R+ +V+ +T  ++    N  +YEISA+   ++ KPFL
Sbjct: 118 RDLCRVCENIPIVLCGNKVDVQNRQVQVRQVTFRRKK---NLQYYEISAKSNYNLEKPFL 174

Query: 588 ILAR 577
            LAR
Sbjct: 175 YLAR 178



 Score = 33.5 bits (75), Expect(2) = 6e-06
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
 Frame = -1

Query: 1016 YMILVLGYHGSGKTTLLQNVNG-------EPKEAANEYTVEFQTNGNGPIRFLCVESMDN 858
            + +L++G  G+GKTT L+ +         EP      ++++F TN  G I F C+++   
Sbjct: 26   FKLLIVGDKGTGKTTFLKRLITEKFEEIYEPTTDVEPHSLDFPTNRGGTIWFDCLDT-PG 84

Query: 857  DITKSWKYNGY---LILCDLTNKYSY 789
             + +   Y G    +I+ D+T   +Y
Sbjct: 85   QVLRDGYYIGVQCAIIMFDVTAGSTY 110


>ref|XP_010047784.1| PREDICTED: GTP-binding nuclear protein Ran-2-like isoform X1
           [Eucalyptus grandis]
          Length = 208

 Score = 45.8 bits (107), Expect(2) = 6e-06
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -3

Query: 765 KELSSMFDNRPIVLVGNKAD-STRKRKVQDITADKELKELNRPFYEISARDKVHIRKPFL 589
           ++L  + +N PIVL GNK D   R+ +V+ +T  ++    N  +YEISA+   ++ KPFL
Sbjct: 118 RDLCRVCENIPIVLCGNKVDVQNRQVQVRQVTFRRKK---NLQYYEISAKSNYNLEKPFL 174

Query: 588 ILAR 577
            LAR
Sbjct: 175 YLAR 178



 Score = 33.5 bits (75), Expect(2) = 6e-06
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
 Frame = -1

Query: 1016 YMILVLGYHGSGKTTLLQNVNG-------EPKEAANEYTVEFQTNGNGPIRFLCVESMDN 858
            + +L++G  G+GKTT L+ +         EP      ++++F TN  G I F C+++   
Sbjct: 26   FKLLIVGDKGTGKTTFLKRLITEKFEEIYEPTTDVEPHSLDFPTNRGGTIWFDCLDT-PG 84

Query: 857  DITKSWKYNGY---LILCDLTNKYSY 789
             + +   Y G    +I+ D+T   +Y
Sbjct: 85   QVLRDGYYIGVQCAIIMFDVTAGSTY 110


>ref|XP_010047785.1| PREDICTED: GTP-binding nuclear protein Ran-2-like isoform X2
           [Eucalyptus grandis]
          Length = 196

 Score = 45.8 bits (107), Expect(2) = 6e-06
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -3

Query: 765 KELSSMFDNRPIVLVGNKAD-STRKRKVQDITADKELKELNRPFYEISARDKVHIRKPFL 589
           ++L  + +N PIVL GNK D   R+ +V+ +T  ++    N  +YEISA+   ++ KPFL
Sbjct: 106 RDLCRVCENIPIVLCGNKVDVQNRQVQVRQVTFRRKK---NLQYYEISAKSNYNLEKPFL 162

Query: 588 ILAR 577
            LAR
Sbjct: 163 YLAR 166



 Score = 33.5 bits (75), Expect(2) = 6e-06
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
 Frame = -1

Query: 1016 YMILVLGYHGSGKTTLLQNVNG-------EPKEAANEYTVEFQTNGNGPIRFLCVESMDN 858
            + +L++G  G+GKTT L+ +         EP      ++++F TN  G I F C+++   
Sbjct: 14   FKLLIVGDKGTGKTTFLKRLITEKFEEIYEPTTDVEPHSLDFPTNRGGTIWFDCLDT-PG 72

Query: 857  DITKSWKYNGY---LILCDLTNKYSY 789
             + +   Y G    +I+ D+T   +Y
Sbjct: 73   QVLRDGYYIGVQCAIIMFDVTAGSTY 98


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